Citrus Sinensis ID: 026630

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Secondary Structure (PSIPRED)
cccccccEEEEHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHccccccccccEEEEccccEEEEEEEEcccccHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcHHHHHHHHcccHHcccccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEccccEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mkgessglIIGISIGVVIGVLLAISALFCFRyhrkrsqignsssrraatlpirangvdscsilsdstvgpespvksgrngngksmwlegfkrsnvvsasgipeysykdLQKATCNFTtligqgafgpvykaqmstgeTVAVKVLAtdskqgekEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKgslashlydenygpltWNLRVHIALDVARGLeylhdgvschlf
Flexible Loop (DISEMBL)
MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRkrsqignsssrraatlpirangvdSCSILSdstvgpespvksgrngngksmwlEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLAtdskqgekEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Low Complexity Region (SEG)
MKGEssgliigisigvvigvllaisALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Disordered region (IsUnstruct)
******GLIIGISIGVVIGVLLAISALFCFRYHR***************************************************WLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD*****KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH**
Disordered Region (DISOPRED)
****SSG**IGISIGVVIGVLLAISALFCFR***********************************************************************EYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAV*V***********FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Disordered Region (DISEMBL)
MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRS*********AATLPIRANGVDSCSI****************NGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Disordered Region (DISPRO)
****SSGLIIGISIGVVIGVLLAISALFCFRYHRKRS*************************************************************SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
Q9LFV3	436	Probable leucine-rich rep	no	no	0.961	0.518	0.467	2e-47
Q9SFT7	414	Serine/threonine-protein	no	no	0.778	0.442	0.408	4e-31
Q9FX99	663	Probable receptor-like pr	no	no	0.625	0.221	0.46	7e-31
Q3E8W4	858	Receptor-like protein kin	no	no	0.863	0.236	0.368	4e-30
C0LGI2	929	Probable LRR receptor-lik	no	no	0.514	0.130	0.508	1e-29
Q9FE20	456	Serine/threonine-protein	no	no	0.531	0.274	0.5	2e-29
Q9SR05	850	Receptor-like protein kin	no	no	0.842	0.232	0.377	4e-29
Q9T020	878	Probable receptor-like pr	no	no	0.544	0.145	0.484	9e-29
C0LGD7	953	Probable LRR receptor-lik	no	no	0.617	0.152	0.449	2e-28
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.531	0.139	0.515	8e-28

>sp|Q9LFV3|Y5157_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 OS=Arabidopsis thaliana GN=At5g15730 PE=2 SV=1

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/233 (46%), Positives = 148/233 (63%), Gaps = 7/233 (3%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGN-SSSRRAATLPIRANGVDS 59
           M   S  ++IGIS+G+ +G+LLA+   F  +++  RS +   ++ + + TLP+       
Sbjct: 1   MVNRSDLVVIGISVGLALGLLLALLLFFAIKWYYGRSHLRRCANEQNSPTLPVHT--AKR 58

Query: 60  CSILSDSTVGPES--PVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFT 117
             ++ D     ES  P ++G     +  W     +   VSASGIP Y+YKD+QKAT NFT
Sbjct: 59  GVVIPDDRANTESSQPPENGAPTQHQPWW-NNHTKDLTVSASGIPRYNYKDIQKATQNFT 117

Query: 118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           T++GQG+FGPVYKA M  GE  A KV  ++S QG++EFQTEV LLGRLHHRNLVNL GYC
Sbjct: 118 TVLGQGSFGPVYKAVMPNGELAAAKVHGSNSSQGDREFQTEVSLLGRLHHRNLVNLTGYC 177

Query: 178 AEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDG 229
            +K   ML+Y FMS GSL + LY  E    L W  R+ IALD++ G+EYLH+G
Sbjct: 178 VDKSHRMLIYEFMSNGSLENLLYGGEGMQVLNWEERLQIALDISHGIEYLHEG 230

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 119/208 (57%), Gaps = 25/208 (12%)

Query: 29  CFRYHRKR--SQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESP-VKSGRNGNGKSM 85
           CF +H K+   +  ++S RR   +  R N          +   PE+P   + +N N    
Sbjct: 6   CFYFHEKKKVPRDSDNSYRRNGEVTGRDN----------NKTHPENPKTVNEQNKNND-- 53

Query: 86  WLEGFKRSNVVSASGIPEYSYKDLQKATCNFTT--LIGQGAFGPVYKAQMS-TGETVAVK 142
             E  + +N ++A     +S+++L  AT NF    LIG+G FG VYK ++  TG  VAVK
Sbjct: 54  --EDKEVTNNIAAQT---FSFRELATATKNFRQECLIGEGGFGRVYKGKLEKTGMIVAVK 108

Query: 143 VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD- 201
            L  +  QG KEF  EV++L  LHH++LVNL+GYCA+  Q +LVY +MS+GSL  HL D 
Sbjct: 109 QLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDL 168

Query: 202 -ENYGPLTWNLRVHIALDVARGLEYLHD 228
             +  PL W+ R+ IAL  A GLEYLHD
Sbjct: 169 TPDQIPLDWDTRIRIALGAAMGLEYLHD 196

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=1 SV=1

 Score =  134 bits (336), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 91/150 (60%), Gaps = 3/150 (2%)

Query: 87  LEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLAT 146
           L  FK     S+S   ++SYK++  AT +F T+IGQG FG VYKA+ + G   AVK +  
Sbjct: 300 LPVFKIHEDDSSSAFRKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFNDGLIAAVKKMNK 359

Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP 206
            S+Q E++F  E+ LL +LHHRNLV L G+C  K +  LVY +M  GSL  HL+     P
Sbjct: 360 VSEQAEQDFCREIGLLAKLHHRNLVALKGFCINKKERFLVYDYMKNGSLKDHLHAIGKPP 419

Query: 207 LTWNLRVHIALDVARGLEYLH---DGVSCH 233
            +W  R+ IA+DVA  LEYLH   D   CH
Sbjct: 420 PSWGTRMKIAIDVANALEYLHFYCDPPLCH 449

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E8W4|ANX2_ARATH Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 122/225 (54%), Gaps = 22/225 (9%)

Query: 9   IIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTV 68
           I    IG   GV   +    CF  ++++ +   S S  ++ LPI  N   S +    ST+
Sbjct: 432 ITAFVIGSAGGVAAVLFCALCFTMYQRKRKFSGSDSHTSSWLPIYGNSHTSAT---KSTI 488

Query: 69  GPESPVKSGRNGNGKSMWLEGFKRSNVVSASGI-PEYSYKDLQKATCNF--TTLIGQGAF 125
                  SG++ NG  +       SN+  A+G+   +S  +++  T NF  + +IG G F
Sbjct: 489 -------SGKSNNGSHL-------SNL--AAGLCRRFSLSEIKHGTHNFDESNVIGVGGF 532

Query: 126 GPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML 185
           G VYK  +  G  VA+K    +S+QG  EF+TE+ LL RL H++LV+L+GYC E G+  L
Sbjct: 533 GKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCL 592

Query: 186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
           +Y +MS G+L  HLY+     LTW  R+ IA+  ARGL YLH G 
Sbjct: 593 IYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGA 637

Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGI2|Y1677_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           L++AT NF+  +G+G+FG VY  +M  G+ VAVK+ A  S    ++F TEV LL R+HHR
Sbjct: 601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHR 660

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLH 227
           NLV L+GYC E  + +LVY +M  GSL  HL+   +Y PL W  R+ IA D A+GLEYLH
Sbjct: 661 NLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLH 720

Query: 228 DG 229
            G
Sbjct: 721 TG 722

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 5/130 (3%)

Query: 104 YSYKDLQKATCNF--TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVM 160
           +++++L  AT NF   T +G+G FG VYK ++ STG+ VAVK L  +  QG +EF  EV+
Sbjct: 74  FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVL 133

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
           +L  LHH NLVNL+GYCA+  Q +LVY FM  GSL  HL+D   +   L WN+R+ IA  
Sbjct: 134 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAG 193

Query: 219 VARGLEYLHD 228
            A+GLE+LHD
Sbjct: 194 AAKGLEFLHD 203

Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SR05|ANX1_ARATH Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1

 Score =  128 bits (321), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 120/220 (54%), Gaps = 22/220 (10%)

Query: 14  IGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESP 73
           IG   GVL  +    CF  ++K+       S  ++ LPI  N          +T G +S 
Sbjct: 433 IGSAGGVLAVLIGALCFTAYKKKQGYQGGDSHTSSWLPIYGNS---------TTSGTKST 483

Query: 74  VKSGRNGNGKSMWLEGFKRSNVVSASGI-PEYSYKDLQKATCNF--TTLIGQGAFGPVYK 130
           + SG++ NG  +       SN+  A+G+   +S  +++  T NF  + +IG G FG VYK
Sbjct: 484 I-SGKSNNGSHL-------SNL--AAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYK 533

Query: 131 AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM 190
             +     VAVK    +S+QG  EF+TE+ LL RL H++LV+L+GYC E G+  LVY +M
Sbjct: 534 GVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYM 593

Query: 191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
           + G+L  HLY+     LTW  R+ IA+  ARGL YLH G 
Sbjct: 594 AFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGA 633

Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1

 Score =  127 bits (318), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/130 (48%), Positives = 82/130 (63%), Gaps = 2/130 (1%)

Query: 104 YSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
           +S  +LQ+AT NF  + +IG G FG VY   +  G  VAVK     S+QG  EFQTE+ +
Sbjct: 514 FSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQM 573

Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           L +L HR+LV+L+GYC E  + +LVY FMS G    HLY +N  PLTW  R+ I +  AR
Sbjct: 574 LSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSAR 633

Query: 222 GLEYLHDGVS 231
           GL YLH G +
Sbjct: 634 GLHYLHTGTA 643

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|C0LGD7|Y1684_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 95/149 (63%), Gaps = 4/149 (2%)

Query: 91  KRSNVVS--ASGIPEYSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLAT 146
           KRS+  S    G+  ++Y +L  AT NF  +T IGQG +G VYK  + +G  VA+K    
Sbjct: 598 KRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQE 657

Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP 206
            S QGEKEF TE+ LL RLHHRNLV+L+G+C E+G+ MLVY +M  G+L  ++  +   P
Sbjct: 658 GSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEP 717

Query: 207 LTWNLRVHIALDVARGLEYLHDGVSCHLF 235
           L + +R+ IAL  A+G+ YLH   +  +F
Sbjct: 718 LDFAMRLRIALGSAKGILYLHTEANPPIF 746

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score =  124 bits (310), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 86/128 (67%), Gaps = 3/128 (2%)

Query: 104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLG 163
           Y+Y+++   T NF   +G+G FG VY   ++  E VAVKVL+  S QG K+F+ EV LL 
Sbjct: 581 YTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLL 640

Query: 164 RLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVAR 221
           R+HH NLV LVGYC E GQH+ L+Y +MS G+L  HL  EN   PL+W  R+ IA + A+
Sbjct: 641 RVHHINLVTLVGYCDE-GQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQ 699

Query: 222 GLEYLHDG 229
           GLEYLH G
Sbjct: 700 GLEYLHIG 707

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
225461166	430	PREDICTED: probable leucine-rich repeat	0.965	0.527	0.890	1e-117
30696478	261	protein kinase family protein [Arabidops	0.987	0.888	0.834	1e-112
30696480	440	protein kinase family protein [Arabidops	0.965	0.515	0.834	1e-111
297792925	437	kinase family protein [Arabidopsis lyrat	0.965	0.519	0.834	1e-111
255563627	431	serine/threonine-specific protein kinase	0.965	0.526	0.890	1e-108
449463168	430	PREDICTED: probable leucine-rich repeat	0.965	0.527	0.812	1e-105
449531988	430	PREDICTED: LOW QUALITY PROTEIN: probable	0.965	0.527	0.812	1e-105
359806757	431	probable leucine-rich repeat receptor-li	0.965	0.526	0.878	1e-105
356549811	431	PREDICTED: probable leucine-rich repeat	0.965	0.526	0.878	1e-104
224124180	231	predicted protein [Populus trichocarpa]	0.974	0.991	0.861	1e-104

>gi|225461166|ref|XP_002282916.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 [Vitis vinifera] gi|302143190|emb|CBI20485.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/229 (89%), Positives = 216/229 (94%), Gaps = 2/229 (0%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MKGESSGLIIGISIG+VIGVLLAI ALFCFRYHRKRSQIGNSSSRRAAT+PIR+NG DSC
Sbjct: 1   MKGESSGLIIGISIGLVIGVLLAILALFCFRYHRKRSQIGNSSSRRAATIPIRSNGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLI 120
           +ILSDST+GP+SP  SGRNG   S WLEGFKRSNVVS SGIPEYSYKDLQKAT NFTTLI
Sbjct: 61  TILSDSTIGPDSPKASGRNG--MSFWLEGFKRSNVVSVSGIPEYSYKDLQKATYNFTTLI 118

Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
           GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEV LLGRLHHRNLVNLVGYCAEK
Sbjct: 119 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVHLLGRLHHRNLVNLVGYCAEK 178

Query: 181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           GQHML+YV+MSKGSLASHLYDE Y PL+W+LR++IALDVARGLEYLHDG
Sbjct: 179 GQHMLIYVYMSKGSLASHLYDEKYEPLSWDLRIYIALDVARGLEYLHDG 227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30696478|ref|NP_851189.1| protein kinase family protein [Arabidopsis thaliana] gi|332009131|gb|AED96514.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/235 (83%), Positives = 220/235 (93%), Gaps = 3/235 (1%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           M+GES GLI+GIS+G+VIGV+LAISALFCFRYHRK+SQI NS SRR+AT+PIR NG DSC
Sbjct: 1   MEGESKGLIVGISLGLVIGVVLAISALFCFRYHRKKSQIVNSGSRRSATIPIRENGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGF-KRSNVVSASGIPEYSYKDLQKATCNFTTL 119
           +I+SDST+GP+SPVKS +NG  +S+WLEGF KRSNV+SASGI EYSY+DLQKATCNFTTL
Sbjct: 61  NIMSDSTIGPDSPVKSSKNG--RSVWLEGFSKRSNVISASGILEYSYRDLQKATCNFTTL 118

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IGQGAFGPVYKAQMSTGE VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL+GYCAE
Sbjct: 119 IGQGAFGPVYKAQMSTGEIVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLIGYCAE 178

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
           KGQHML+YV+MSKGSLASHLY E + PL+W+LRV+IALDVARGLEYLHDGVSC L
Sbjct: 179 KGQHMLIYVYMSKGSLASHLYSEKHEPLSWDLRVYIALDVARGLEYLHDGVSCLL 233

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30696480|ref|NP_568809.2| protein kinase family protein [Arabidopsis thaliana] gi|9758951|dbj|BAB09338.1| serine/threonine-specific protein kinase-like protein [Arabidopsis thaliana] gi|332009132|gb|AED96515.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/230 (83%), Positives = 216/230 (93%), Gaps = 3/230 (1%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           M+GES GLI+GIS+G+VIGV+LAISALFCFRYHRK+SQI NS SRR+AT+PIR NG DSC
Sbjct: 1   MEGESKGLIVGISLGLVIGVVLAISALFCFRYHRKKSQIVNSGSRRSATIPIRENGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGF-KRSNVVSASGIPEYSYKDLQKATCNFTTL 119
           +I+SDST+GP+SPVKS +NG  +S+WLEGF KRSNV+SASGI EYSY+DLQKATCNFTTL
Sbjct: 61  NIMSDSTIGPDSPVKSSKNG--RSVWLEGFSKRSNVISASGILEYSYRDLQKATCNFTTL 118

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IGQGAFGPVYKAQMSTGE VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL+GYCAE
Sbjct: 119 IGQGAFGPVYKAQMSTGEIVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLIGYCAE 178

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           KGQHML+YV+MSKGSLASHLY E + PL+W+LRV+IALDVARGLEYLHDG
Sbjct: 179 KGQHMLIYVYMSKGSLASHLYSEKHEPLSWDLRVYIALDVARGLEYLHDG 228

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792925|ref|XP_002864347.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310182|gb|EFH40606.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/230 (83%), Positives = 215/230 (93%), Gaps = 3/230 (1%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           M+GES GLI+GIS+G+VIGV LAISALFCFRYHRKRSQI NS SRR+AT+PIR NG DSC
Sbjct: 1   MEGESFGLIVGISLGLVIGVALAISALFCFRYHRKRSQIVNSGSRRSATIPIRENGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGF-KRSNVVSASGIPEYSYKDLQKATCNFTTL 119
           +++SDST+GP+SPVKS +NG  +S+WLEGF KRSNV+SASGI EYSY+DLQKATCNFTTL
Sbjct: 61  NVMSDSTIGPDSPVKSSKNG--RSVWLEGFNKRSNVISASGILEYSYRDLQKATCNFTTL 118

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IGQGAFGPVYKAQMSTGE VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL+GYCAE
Sbjct: 119 IGQGAFGPVYKAQMSTGEIVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLIGYCAE 178

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           KGQHML+YV+MSKGSLASHLY E + PL+W+LRV+IALDVARGLEYLHDG
Sbjct: 179 KGQHMLIYVYMSKGSLASHLYSEKHEPLSWDLRVYIALDVARGLEYLHDG 228

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563627|ref|XP_002522815.1| serine/threonine-specific protein kinase, putative [Ricinus communis] gi|223537899|gb|EEF39513.1| serine/threonine-specific protein kinase, putative [Ricinus communis]

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/229 (89%), Positives = 215/229 (93%), Gaps = 2/229 (0%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MKGESSGLIIGISIGVVIGVLLAI  LFCFRYHRKRSQIGNSSSRRAAT+PIRANG DSC
Sbjct: 1   MKGESSGLIIGISIGVVIGVLLAILGLFCFRYHRKRSQIGNSSSRRAATIPIRANGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLI 120
           +ILSDST+GPESPVKSGRNG   S WL+GFK+SNVV+ SGIPEYSYKDLQKAT NFTTLI
Sbjct: 61  TILSDSTLGPESPVKSGRNGT--SFWLDGFKKSNVVAVSGIPEYSYKDLQKATYNFTTLI 118

Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
           GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEF TEVMLLGRLHHRNLVNLVGYCAEK
Sbjct: 119 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEK 178

Query: 181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           GQHML+YVFMSKGSLASHLY EN+  L+W+ RV+IALDVARGLEYLHDG
Sbjct: 179 GQHMLIYVFMSKGSLASHLYSENHETLSWDWRVYIALDVARGLEYLHDG 227

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463168|ref|XP_004149306.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Cucumis sativus]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/229 (81%), Positives = 205/229 (89%), Gaps = 2/229 (0%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MK ES+GL IGISIGVVIGVLLAI ALFCFRYHRKR QIGNSSSRRAA LPIR NG DSC
Sbjct: 1   MKEESTGLAIGISIGVVIGVLLAILALFCFRYHRKRLQIGNSSSRRAANLPIRTNGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLI 120
           +ILSDSTVGPESP+K+ RN    S W +GFKRS+V+SASG+PEYS KDLQKAT NFT++I
Sbjct: 61  TILSDSTVGPESPMKTSRNS--MSSWFDGFKRSSVISASGMPEYSIKDLQKATGNFTSVI 118

Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
           GQGAFGPVYKA + +GETVAVKVLAT+SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE+
Sbjct: 119 GQGAFGPVYKATLPSGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAER 178

Query: 181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           G+HMLVYV+MSKGSLASHLY +  G L WN+RV +ALDVARGLEYLHDG
Sbjct: 179 GEHMLVYVYMSKGSLASHLYSDKNGLLGWNMRVRVALDVARGLEYLHDG 227

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531988|ref|XP_004172967.1| PREDICTED: LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Cucumis sativus]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/229 (81%), Positives = 205/229 (89%), Gaps = 2/229 (0%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MK ES+GL IGISIGVVIGVLLAI ALFCFRYHRKR QIGNSSSRRAA LPIR NG DSC
Sbjct: 1   MKEESTGLAIGISIGVVIGVLLAILALFCFRYHRKRLQIGNSSSRRAANLPIRTNGADSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLI 120
           +ILSDSTVGPESP+K+ RN    S W +GFKRS+V+SASG+PEYS KDLQKAT NFT++I
Sbjct: 61  TILSDSTVGPESPMKTSRNS--MSSWFDGFKRSSVISASGMPEYSIKDLQKATGNFTSVI 118

Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
           GQGAFGPVYKA + +GETVAVKVLAT+SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE+
Sbjct: 119 GQGAFGPVYKATLPSGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAER 178

Query: 181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           G+HMLVYV+MSKGSLASHLY +  G L WN+RV +ALDVARGLEYLHDG
Sbjct: 179 GEHMLVYVYMSKGSLASHLYSDKNGLLGWNMRVRVALDVARGLEYLHDG 227

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806757|ref|NP_001241300.1| probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max] gi|223452504|gb|ACM89579.1| protein kinase family protein [Glycine max]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/230 (87%), Positives = 215/230 (93%), Gaps = 3/230 (1%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MK ES+GLIIGISIGVVIGV LAISALFC RYHRKRSQIGNSSSRRA T+PIR NGVDSC
Sbjct: 1   MKEESTGLIIGISIGVVIGVGLAISALFCLRYHRKRSQIGNSSSRRAHTIPIRENGVDSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTL 119
           +ILSDST+GPESPV+SGRNG   S+WL+GFK+S N+VSASGIPEYSYKDLQKAT NFTTL
Sbjct: 61  NILSDSTLGPESPVRSGRNG--MSLWLDGFKKSSNMVSASGIPEYSYKDLQKATYNFTTL 118

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IGQGAFGPVYKAQMSTGETVAVKVLAT+SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE
Sbjct: 119 IGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 178

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           KGQHMLVYV+MSKGSLASHLY E  G L W+LRVHIALDVARG+EYLHDG
Sbjct: 179 KGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGIEYLHDG 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549811|ref|XP_003543284.1| PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/230 (87%), Positives = 214/230 (93%), Gaps = 3/230 (1%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MK ES+GLIIGISIGVVIGV LAISALFC RYHRKRSQIGNSSSRRA T+PIR NGVDSC
Sbjct: 1   MKEESTGLIIGISIGVVIGVGLAISALFCLRYHRKRSQIGNSSSRRAHTIPIRENGVDSC 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTL 119
           +ILSDST+GPESPV+SGRNG   S WL+GFK+S N+VSASGIPEYSYKDLQKAT NFTTL
Sbjct: 61  NILSDSTLGPESPVRSGRNG--MSFWLDGFKKSSNMVSASGIPEYSYKDLQKATYNFTTL 118

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IGQGAFGPVYKAQMSTGETVAVKVLAT+SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE
Sbjct: 119 IGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 178

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           KGQHMLVYV+MSKGSLASHLY E  G L W+LRVHIALDVARG+EYLHDG
Sbjct: 179 KGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGIEYLHDG 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124180|ref|XP_002319265.1| predicted protein [Populus trichocarpa] gi|222857641|gb|EEE95188.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/231 (86%), Positives = 217/231 (93%), Gaps = 2/231 (0%)

Query: 1   MKGESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSC 60
           MKGESSGLIIGISIGVVIGVLLAI ALFCFRYHRKRSQIGNSSSRRAAT+PIRANG D+ 
Sbjct: 1   MKGESSGLIIGISIGVVIGVLLAILALFCFRYHRKRSQIGNSSSRRAATIPIRANGADAS 60

Query: 61  SILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLI 120
           +I+SDST+GP+SP+K+GRNG   S+WLEGFKRS+V S SGIP YSYKDLQKAT NFTTLI
Sbjct: 61  TIMSDSTIGPDSPLKAGRNG--VSLWLEGFKRSSVGSVSGIPVYSYKDLQKATYNFTTLI 118

Query: 121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
           GQGAFGPVYKAQM+TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK
Sbjct: 119 GQGAFGPVYKAQMTTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 178

Query: 181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
           GQHML+YV+MSKGSLASHLY E+   L+W+LRVHIAL+VARGLEYLHDGV+
Sbjct: 179 GQHMLIYVYMSKGSLASHLYREDIKHLSWDLRVHIALEVARGLEYLHDGVN 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
TAIR|locus:2172149	440	CRLK1 "calcium/calmodulin-regu	0.859	0.459	0.843	8.1e-92
TAIR|locus:2143166	436	CRLK2 "calcium/calmodulin-regu	0.838	0.451	0.480	2.7e-45
TAIR|locus:2090634	663	AT3G19300 [Arabidopsis thalian	0.570	0.202	0.489	2.8e-31
TAIR|locus:2034344	381	ASG5 "ALTERED SEED GERMINATION	0.676	0.417	0.436	1.8e-30
TAIR|locus:2098580	414	AT3G07070 [Arabidopsis thalian	0.791	0.449	0.409	4.9e-30
TAIR|locus:2087263	363	AT3G24790 [Arabidopsis thalian	0.587	0.380	0.486	2.1e-29
TAIR|locus:2091980	432	CDG1 "CONSTITUTIVE DIFFERENTIA	0.531	0.289	0.503	4.4e-29
TAIR|locus:2179857	456	PBS1 "avrPphB susceptible 1" [	0.595	0.307	0.46	4.4e-29
TAIR|locus:2014604	381	AT1G76370 [Arabidopsis thalian	0.719	0.443	0.419	5.6e-29
TAIR|locus:2151191	378	CDL1 "CDG1-like 1" [Arabidopsi	0.531	0.330	0.507	1.2e-28

TAIR|locus:2172149 CRLK1 "calcium/calmodulin-regulated receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 173/205 (84%), Positives = 192/205 (93%)

Query:    26 ALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSM 85
             ALFCFRYHRK+SQI NS SRR+AT+PIR NG DSC+I+SDST+GP+SPVKS +NG  +S+
Sbjct:    26 ALFCFRYHRKKSQIVNSGSRRSATIPIRENGADSCNIMSDSTIGPDSPVKSSKNG--RSV 83

Query:    86 WLEGF-KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVL 144
             WLEGF KRSNV+SASGI EYSY+DLQKATCNFTTLIGQGAFGPVYKAQMSTGE VAVKVL
Sbjct:    84 WLEGFSKRSNVISASGILEYSYRDLQKATCNFTTLIGQGAFGPVYKAQMSTGEIVAVKVL 143

Query:   145 ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY 204
             ATDSKQGEKEFQTEVMLLGRLHHRNLVNL+GYCAEKGQHML+YV+MSKGSLASHLY E +
Sbjct:   144 ATDSKQGEKEFQTEVMLLGRLHHRNLVNLIGYCAEKGQHMLIYVYMSKGSLASHLYSEKH 203

Query:   205 GPLTWNLRVHIALDVARGLEYLHDG 229
              PL+W+LRV+IALDVARGLEYLHDG
Sbjct:   204 EPLSWDLRVYIALDVARGLEYLHDG 228

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2143166 CRLK2 "calcium/calmodulin-regulated receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 100/208 (48%), Positives = 132/208 (63%)

Query:    28 FCFRYHRKRSQIGN-SSSRRAATLPIRA--NGVDSCSILSDSTVGPES--PVKSGRNGNG 82
             F  +++  RS +   ++ + + TLP+     GV    ++ D     ES  P ++G     
Sbjct:    28 FAIKWYYGRSHLRRCANEQNSPTLPVHTAKRGV----VIPDDRANTESSQPPENGAPTQH 83

Query:    83 KSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVK 142
             +  W     +   VSASGIP Y+YKD+QKAT NFTT++GQG+FGPVYKA M  GE  A K
Sbjct:    84 QPWW-NNHTKDLTVSASGIPRYNYKDIQKATQNFTTVLGQGSFGPVYKAVMPNGELAAAK 142

Query:   143 VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD- 201
             V  ++S QG++EFQTEV LLGRLHHRNLVNL GYC +K   ML+Y FMS GSL + LY  
Sbjct:   143 VHGSNSSQGDREFQTEVSLLGRLHHRNLVNLTGYCVDKSHRMLIYEFMSNGSLENLLYGG 202

Query:   202 ENYGPLTWNLRVHIALDVARGLEYLHDG 229
             E    L W  R+ IALD++ G+EYLH+G
Sbjct:   203 EGMQVLNWEERLQIALDISHGIEYLHEG 230

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2090634 AT3G19300 [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
 Identities = 67/137 (48%), Positives = 88/137 (64%)

Query:   100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEV 159
             G  ++SYK+++KAT +F  +IG+G FG VYKA+ S G   AVK +   S+Q E EF  E+
Sbjct:   312 GFRKFSYKEIRKATEDFNAVIGRGGFGTVYKAEFSNGLVAAVKKMNKSSEQAEDEFCREI 371

Query:   160 MLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDV 219
              LL RLHHR+LV L G+C +K +  LVY +M  GSL  HL+     PL+W  R+ IA+DV
Sbjct:   372 ELLARLHHRHLVALKGFCNKKNERFLVYEYMENGSLKDHLHSTEKSPLSWESRMKIAIDV 431

Query:   220 ARGLEYLH---DGVSCH 233
             A  LEYLH   D   CH
Sbjct:   432 ANALEYLHFYCDPPLCH 448

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2034344 ASG5 "ALTERED SEED GERMINATION 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 76/174 (43%), Positives = 102/174 (58%)

Query:    58 DSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNF- 116
             DS S+    T G ES   SG   NGK         ++ +   G   +++K+L  AT NF 
Sbjct:    31 DS-SVHGSDTTGTESI--SGILVNGKV--------NSPIPGGGARSFTFKELAAATRNFR 79

Query:   117 -TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
                L+G+G FG VYK ++ +G+ VA+K L  D  QG +EF  EV++L  LHH NLV L+G
Sbjct:    80 EVNLLGEGGFGRVYKGRLDSGQVVAIKQLNPDGLQGNREFIVEVLMLSLLHHPNLVTLIG 139

Query:   176 YCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
             YC    Q +LVY +M  GSL  HL+D   N  PL+WN R+ IA+  ARG+EYLH
Sbjct:   140 YCTSGDQRLLVYEYMPMGSLEDHLFDLESNQEPLSWNTRMKIAVGAARGIEYLH 193

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2098580 AT3G07070 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 84/205 (40%), Positives = 118/205 (57%)

Query:    29 CFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLE 88
             CF +H K+    +S +        R NG    +   ++   PE+P K+    N  +   E
Sbjct:     6 CFYFHEKKKVPRDSDNS------YRRNG--EVTGRDNNKTHPENP-KTVNEQNKNND--E 54

Query:    89 GFKRSNVVSASGIPEYSYKDLQKATCNFTT--LIGQGAFGPVYKAQMS-TGETVAVKVLA 145
               + +N ++A     +S+++L  AT NF    LIG+G FG VYK ++  TG  VAVK L 
Sbjct:    55 DKEVTNNIAAQ---TFSFRELATATKNFRQECLIGEGGFGRVYKGKLEKTGMIVAVKQLD 111

Query:   146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--EN 203
              +  QG KEF  EV++L  LHH++LVNL+GYCA+  Q +LVY +MS+GSL  HL D   +
Sbjct:   112 RNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDLTPD 171

Query:   204 YGPLTWNLRVHIALDVARGLEYLHD 228
               PL W+ R+ IAL  A GLEYLHD
Sbjct:   172 QIPLDWDTRIRIALGAAMGLEYLHD 196

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2087263 AT3G24790 [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 70/144 (48%), Positives = 93/144 (64%)

Query:    91 KRSNVVSAS-GIPEYSYKDLQKATCNFTT--LIGQGAFGPVYKAQMST-GETVAVKVLAT 146
             K +N  S + G   +++++L  AT NF    LIG+G FG VYK ++    + VAVK L  
Sbjct:    21 KNANGPSNNMGARIFTFRELATATKNFRQECLIGEGGFGRVYKGKLENPAQVVAVKQLDR 80

Query:   147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG- 205
             +  QG++EF  EV++L  LHHRNLVNL+GYCA+  Q +LVY +M  GSL  HL D   G 
Sbjct:    81 NGLQGQREFLVEVLMLSLLHHRNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLEPGQ 140

Query:   206 -PLTWNLRVHIALDVARGLEYLHD 228
              PL WN R+ IAL  A+G+EYLHD
Sbjct:   141 KPLDWNTRIKIALGAAKGIEYLHD 164

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2091980 CDG1 "CONSTITUTIVE DIFFERENTIAL GROWTH 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 65/129 (50%), Positives = 89/129 (68%)

Query:   104 YSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
             +SY++L  AT +F   +LIG+G FG VYK ++STG+ +AVK+L     QG+KEF  EV++
Sbjct:    62 FSYRELAIATNSFRNESLIGRGGFGTVYKGRLSTGQNIAVKMLDQSGIQGDKEFLVEVLM 121

Query:   162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP--LTWNLRVHIALDV 219
             L  LHHRNLV+L GYCAE  Q ++VY +M  GS+  HLYD + G   L W  R+ IAL  
Sbjct:   122 LSLLHHRNLVHLFGYCAEGDQRLVVYEYMPLGSVEDHLYDLSEGQEALDWKTRMKIALGA 181

Query:   220 ARGLEYLHD 228
             A+GL +LH+
Sbjct:   182 AKGLAFLHN 190

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0040007 "growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IDA

GO:1900459 "positive regulation of brassinosteroid mediated signaling pathway" evidence=IMP

TAIR|locus:2179857 PBS1 "avrPphB susceptible 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 69/150 (46%), Positives = 96/150 (64%)

Query:    89 GFKRSNVVSASGIPE-----YSYKDLQKATCNF--TTLIGQGAFGPVYKAQM-STGETVA 140
             G KR  ++   G+ +     +++++L  AT NF   T +G+G FG VYK ++ STG+ VA
Sbjct:    54 GSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVA 113

Query:   141 VKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY 200
             VK L  +  QG +EF  EV++L  LHH NLVNL+GYCA+  Q +LVY FM  GSL  HL+
Sbjct:   114 VKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLH 173

Query:   201 D--ENYGPLTWNLRVHIALDVARGLEYLHD 228
             D   +   L WN+R+ IA   A+GLE+LHD
Sbjct:   174 DLPPDKEALDWNMRMKIAAGAAKGLEFLHD 203

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0006952 "defense response" evidence=TAS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2014604 AT1G76370 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 73/174 (41%), Positives = 98/174 (56%)

Query:    63 LSDSTVGPESPVKSGRNGNG-KSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFT--TL 119
             LSD T       K    G G KS  L   K ++     G   +++K+L  AT NF    +
Sbjct:    21 LSDLTDYASVATKIDPRGTGSKSGILVNGKVNSPKPGGGARSFTFKELAAATKNFREGNI 80

Query:   120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
             IG+G FG VYK ++ +G+ VA+K L  D  QG +EF  EV +L   HH NLV L+GYC  
Sbjct:    81 IGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTS 140

Query:   180 KGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
               Q +LVY +M  GSL  HL+D   +  PL+W  R+ IA+  ARG+EYLH  +S
Sbjct:   141 GAQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLHCKIS 194

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2151191 CDL1 "CDG1-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 66/130 (50%), Positives = 86/130 (66%)

Query:   104 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVM 160
             +++ +L  AT NF    LIG+G FG VYK  + ST +T A+K L  +  QG +EF  EV+
Sbjct:    61 FTFSELATATRNFRKECLIGEGGFGRVYKGYLASTSQTAAIKQLDHNGLQGNREFLVEVL 120

Query:   161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG--PLTWNLRVHIALD 218
             +L  LHH NLVNL+GYCA+  Q +LVY +M  GSL  HL+D + G  PL WN R+ IA  
Sbjct:   121 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKQPLDWNTRMKIAAG 180

Query:   219 VARGLEYLHD 228
              A+GLEYLHD
Sbjct:   181 AAKGLEYLHD 190

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:1900459 "positive regulation of brassinosteroid mediated signaling pathway" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	235
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-29
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-28
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-28
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-27
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-21
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-21
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-17
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-16
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-15
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-15
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	5e-15
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-13
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-13
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-13
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-13
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-13
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-12
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-12
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-12
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	6e-12
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-12
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-11
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-11
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-11
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-11
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-11
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-10
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-10
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-10
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-09
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-09
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-09
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-09
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-09
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-09
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	7e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-09
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-09
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-08
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-08
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-08
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-08
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-08
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-08
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-08
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	8e-08
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	9e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	9e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-07
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-07
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-07
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-07
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-07
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-07
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	4e-07
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-07
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	6e-07
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	8e-07
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	9e-07
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-06
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-06
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	8e-06
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	9e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	9e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-05
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	6e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	6e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	1e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	2e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.001
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.002
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.002
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.002
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.002
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.002
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.002
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.002
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.003

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  108 bits (273), Expect = 8e-29
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 6/119 (5%)

Query: 116 FTTLIGQGAFGPVYKAQ-----MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRN 169
               +G+GAFG VYK             VAVK L  D S+Q  +EF  E  ++ +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +V L+G C E+   M+V  +M  G L  +L       L+ +  +  AL +ARG+EYL  
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES 121

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  106 bits (268), Expect = 4e-28
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 116 FTTLIGQGAFGPVYKAQ-----MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRN 169
               +G+GAFG VYK +           VAVK L  D S+Q  +EF  E  ++ +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +V L+G C E+    +V  +M  G L S+L   N   L+ +  +  AL +ARG+EYL  
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRK-NRPKLSLSDLLSFALQIARGMEYLES 120

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  106 bits (268), Expect = 4e-28
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 120 IGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+GAFG VYK ++   +     VAVK L    S++  K+F  E  ++ +L H N+V L+
Sbjct: 3   LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLL 62

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL-------YDENYGPLTWNLRVHIALDVARGLEYLH 227
           G C E+    LV  +M  G L  +L              L+    +  A+ +A+G+EYL 
Sbjct: 63  GVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA 122

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  105 bits (264), Expect = 1e-27
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 7/115 (6%)

Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG VYK  +      T   VAVK L    S++  +EF  E  ++ +L H N+V L
Sbjct: 7   LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +G C +     +V  +M  G L   L       LT    + +AL +A+G+EYL  
Sbjct: 67  LGVCTQGEPLYIVTEYMPGGDLLDFLRKHG-EKLTLKDLLQMALQIAKGMEYLES 120

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 92.3 bits (230), Expect = 6e-23
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           +G+G FG VY A+   TG+ VA+K++   DS    +E   E+ +L +L+H N+V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            ++    LV  +   GSL   L  EN G L+ +  + I L +  GLEYLH
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLL-KENEGKLSEDEILRILLQILEGLEYLH 109

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 89.1 bits (222), Expect = 1e-21
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
            +G+G+FG VY A+   TG+ VA+KV+     K+  +    E+ +L +L H N+V L   
Sbjct: 6   KLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDV 65

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             ++ +  LV  +   G L   L  +  G L+ +        +   LEYLH 
Sbjct: 66  FEDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARFYLRQILSALEYLHS 115

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G G+FG VYKA+   TG+ VAVK+L   S   + ++  + E+ +L RL H N+V L+  
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDA 66

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             +K    LV  +   G L  +L     GPL+ +    IAL + RGLEYLH 
Sbjct: 67  FEDKDHLYLVMEYCEGGDLFDYL--SRGGPLSEDEAKKIALQILRGLEYLHS 116

Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 19/137 (13%)

Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGET------VAVKVLA-TDSKQGEKEFQTEVML 161
           +Q+ T      +G+GAFG V+  +    E       VAVK L  T S    K+F+ E  L
Sbjct: 2   VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAEL 61

Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------------YDENYGPLTW 209
           L    H N+V   G C E    ++V+ +M  G L   L             D   G LT 
Sbjct: 62  LTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTL 121

Query: 210 NLRVHIALDVARGLEYL 226
           +  + IA+ +A G+ YL
Sbjct: 122 SQLLQIAVQIASGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 78.8 bits (195), Expect = 1e-17
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 9/116 (7%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           L+G+G+FG VY A    TGE +AVK   L+ DS++  +  + E+ +L  L H N+V   G
Sbjct: 7   LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66

Query: 176 YCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              ++ ++ L  +F+   S GSL+S L  + +G L   +       +  GL YLH 
Sbjct: 67  SERDEEKNTL-NIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLAYLHS 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVK--VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           LIG+GAFG VYK   + TG+ VA+K   L    ++  K    E+ LL  L H N+V  +G
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66

Query: 176 YCAEKGQHMLVYV-FMSKGSLASHLYDENYGPLTWNL-RVHIALDVARGLEYLHD 228
              E    + + + +   GSL   +  + +GP   +L  V++   V +GL YLH+
Sbjct: 67  -SIETSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVYVY-QVLQGLAYLHE 117

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 72.8 bits (179), Expect = 2e-15
 Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           K+L+         IG+G FG V       G+ VAVK L  DS   +  F  E  ++  L 
Sbjct: 6   KELKLGAT-----IGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQA-FLAEASVMTTLR 58

Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           H NLV L+G   +     +V  +M+KGSL  +L       +T   ++  ALDV  G+EYL
Sbjct: 59  HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL 118

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 72.1 bits (177), Expect = 3e-15
 Identities = 36/114 (31%), Positives = 57/114 (50%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V++        VA+K+L +D    +++FQ EV  L RL H++L++L   C+ 
Sbjct: 14  LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV 73

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                ++   M KGSL + L       L     + +A  VA G+ YL +  S H
Sbjct: 74  GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH 127

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 71.7 bits (176), Expect = 5e-15
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLVGYC 177
            IG+G FG VYK  +     VAVK   +      K  F  E  +L +  H N+V L+G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            +K    +V   +  GSL + L  +    LT    + ++LD A G+EYL
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL-RKKKNRLTVKKLLQMSLDAAAGMEYL 109

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 120 IGQGAFGPVYKAQ---MSTGE---TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
           IGQGAFG V++A+   +   E    VAVK+L  + S   + +FQ E  L+    H N+V 
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--------------------YDENYGPLTWNLR 212
           L+G CA      L++ +M+ G L   L                       N  PL+   +
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 213 VHIALDVARGLEYLHD 228
           + IA  VA G+ YL +
Sbjct: 133 LCIAKQVAAGMAYLSE 148

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 68.4 bits (168), Expect = 7e-14
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           IG+G FG VYKA    TG+ VA+KV+  +SK+ +++   E+ +L +  H N+V   G   
Sbjct: 8   IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL 67

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           +K +  +V  F S GSL   L       LT +   ++  ++ +GLEYLH
Sbjct: 68  KKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVCKELLKGLEYLH 115

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 21/144 (14%)

Query: 111 KATCNFTTLIGQGAFGPVYKAQ------MSTGETVAVKVLATD-SKQGEKEFQTEVMLLG 163
            +   F   +G+GAFG VYK +        +  +VA+K L  +   + ++EF+ E  L+ 
Sbjct: 4   LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMS 63

Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------------ASHLYDENYGPLTW 209
            L H N+V L+G C ++    +++ +++ G L              A    +     L  
Sbjct: 64  DLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDC 123

Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
           +  +HIA+ +A G+EYL      H
Sbjct: 124 SDFLHIAIQIAAGMEYLSSHHFVH 147

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 20/145 (13%)

Query: 88  EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
                 ++VS  G P   YK+L+K        IG+GA G VYKA   +TG+ VA+K +  
Sbjct: 4   LKAALKDIVSE-GDPRELYKNLEK--------IGEGASGEVYKATDRATGKEVAIKKMRL 54

Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYG 205
             +  E     E++++    H N+V+        G  + +V  +M  GSL   +  +N+ 
Sbjct: 55  RKQNKELIIN-EILIMKDCKHPNIVDYYD-SYLVGDELWVVMEYMDGGSLTD-IITQNFV 111

Query: 206 PLTWNLRVHIA---LDVARGLEYLH 227
            +       IA    +V +GLEYLH
Sbjct: 112 RMN---EPQIAYVCREVLQGLEYLH 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 67.6 bits (165), Expect = 2e-13
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)

Query: 119 LIGQGAFGPVYKAQM------STGET-VAVKVL---ATDSKQGEKEFQTEVMLLGRLHHR 168
            +G GAFG VY+          +G   VAVK L   ATD ++  KEF  E  L+   +H 
Sbjct: 2   FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK--KEFLKEAHLMSNFNHP 59

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD----ENYGP-LTWNLRVHIALDVARGL 223
           N+V L+G C       ++   M  G L S+L D        P LT    + I LDVA+G 
Sbjct: 60  NIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119

Query: 224 EYLHD 228
            YL  
Sbjct: 120 VYLEQ 124

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 12/119 (10%)

Query: 120 IGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
           +G GAFG VY+              VAVK L    S+Q E +F  E +++ + +H+N+V 
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----ENYGPLTWNLRVHIALDVARGLEYL 226
           L+G   E+    ++   M+ G L S L +     E    LT    +  A DVA+G +YL
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 14/123 (11%)

Query: 118 TLIGQGAFGPVYKAQM-----STGET-VAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNL 170
           T +G+G FG V+ A+        GET V VK L  T  +  + EF+ E+ +  +L H+N+
Sbjct: 11  TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV 70

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSL-----ASHLYDENYG--PLTWNLRVHIALDVARGL 223
           V L+G C E   H ++  +   G L     A+   DE     PL+   +V +   +A G+
Sbjct: 71  VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM 130

Query: 224 EYL 226
           ++L
Sbjct: 131 DHL 133

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 117 TTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
             +IG G FG V + ++         VA+K L   S   ++ +F TE  ++G+  H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
            L G   +    M++  +M  GSL   L  EN G  T    V +   +A G++YL +   
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFL-RENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127

Query: 232 CH 233
            H
Sbjct: 128 VH 129

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 65.0 bits (158), Expect = 1e-12
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           +LQK T     +IG+G FG V + +  TG+ VAVK +  D     + F  E  ++ +LHH
Sbjct: 4   NLQKLT--LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA--QAFLEETAVMTKLHH 58

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +NLV L+G     G + +V   MSKG+L + L       ++    +  +LDVA G+EYL
Sbjct: 59  KNLVRLLGVILHNGLY-IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL 116

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           IG G +G VYKA+  +TGE VA+KV+  +     +  Q E+ +L    H N+V   G   
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            + +  +V  +   GSL   +Y    GPL+     ++  +  +GL YLH
Sbjct: 71  RRDKLWIVMEYCGGGSL-QDIYQVTRGPLSELQIAYVCRETLKGLAYLH 118

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 120 IGQGAFGPVYKA-----QMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V          +TGE VAVK L     +Q   +F+ E+ +L  L H N+V  
Sbjct: 12  LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKY 71

Query: 174 VGYCAEKGQ--HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G C + G     L+  ++  GSL  +L   +   +     +  +  + +G++YL  
Sbjct: 72  KGVCEKPGGRSLRLIMEYLPSGSLRDYL-QRHRDQINLKRLLLFSSQICKGMDYLGS 127

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNL 170
                +G+G+FG VY A+    + VA+KVLA       +  + F  E+ +L  L H  N+
Sbjct: 3   RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           V L  +  ++G   LV  ++  GSL   L      GPL+ +  + I   +   LEYLH  
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120

Query: 230 VSCH 233
              H
Sbjct: 121 GIIH 124

Length = 384

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 63.7 bits (155), Expect = 5e-12
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGE--KEFQTEVMLLGRLHHRNLV 171
            +G GAF   Y+A+ + TG  +AVK +     T S+Q E  +  + E+ L+ RL+H +++
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
            ++G   E     L   +M+ GS++  L    YG     + ++    + RGL YLH+   
Sbjct: 67  RMLGATCEDSHFNLFVEWMAGGSVSHLL--SKYGAFKEAVIINYTEQLLRGLSYLHENQI 124

Query: 232 CH 233
            H
Sbjct: 125 IH 126

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 63.1 bits (153), Expect = 6e-12
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G   E
Sbjct: 14  IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            KG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 63.2 bits (154), Expect = 7e-12
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 18/120 (15%)

Query: 120 IGQGAFGPVYKAQ-MSTGET----VAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G GAFG VYK   +  GE     VA+KVL  ++  +  KE   E  ++  + H ++V L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGP---LTWNLRVHIALDVARGLEYLHD 228
           +G C    Q  L+   M  G L  ++ +  +N G    L W       + +A+G+ YL +
Sbjct: 75  LGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW------CVQIAKGMSYLEE 127

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G G +G VY+        TVAVK L  D+ + E EF  E  ++  + H NLV L+G C 
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 72

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            +    ++  FM+ G+L  +L + N   +   + +++A  ++  +EYL
Sbjct: 73  REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 120

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 14/119 (11%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKV--LATDSKQGE---KEFQTEVMLLGRLHHRNLVN 172
           L+G G+FG VY+   +  G+  AVK   LA D + G+   K+ + E+ LL +L H N+V 
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66

Query: 173 LVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +G   E+     +Y+F+     GSLA  L  + YG     +       +  GLEYLHD
Sbjct: 67  YLGTEREEDN---LYIFLELVPGGSLAKLL--KKYGSFPEPVIRLYTRQILLGLEYLHD 120

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ---GEKEF---QTEVMLLGRLHHRNLVN 172
           ++G+GA+G VY    + G+ +AVK +  D+      EKE+   Q EV LL  L H N+V 
Sbjct: 7   VLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
            +G C +     +   F+  GS++S L    +GPL   +       +  G+ YLH+    
Sbjct: 67  YLGTCLDDNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVAYLHNNCVV 124

Query: 233 H 233
           H
Sbjct: 125 H 125

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 30/134 (22%)

Query: 119 LIGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEF-----QTEVM-LLGRLH 166
            +G+GAFG V KA+       +   TVAVK+L  D+   EK+      + E+M ++G+  
Sbjct: 19  PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGK-- 74

Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------YDENY-------GPLTWNLR 212
           H+N++NL+G C ++G   +V  + + G+L   L          +          LT    
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134

Query: 213 VHIALDVARGLEYL 226
           V  A  VARG+E+L
Sbjct: 135 VSFAYQVARGMEFL 148

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLAT--DSKQGEKEFQT---EVMLLGRLHHRNLVN 172
           L+GQGAFG VY    + TG  +AVK +    DS + +KE      E+ LL  L H  +V 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ 68

Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
             G C    + + +++ +M  GS+   L  + YG LT  +       +  G+EYLH  + 
Sbjct: 69  YYG-CLRDDETLSIFMEYMPGGSVKDQL--KAYGALTETVTRKYTRQILEGVEYLHSNMI 125

Query: 232 CH 233
            H
Sbjct: 126 VH 127

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 60.9 bits (148), Expect = 3e-11
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 119 LIGQGAFGPVYKAQMST--GET--VAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNL 173
            +G G+FG V + + ST  G+   VAVK L +D       +F  E  ++  L H NL+ L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G        M+V      GSL   L  +  G    +     A+ +A G+ YL 
Sbjct: 62  YGVVLTH-PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE 114

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 60.4 bits (146), Expect = 6e-11
 Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 19/126 (15%)

Query: 120 IGQGAFGPVYKAQMST------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S+   ++FQ E  LL  L H+++V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 174 VGYCAEKGQHMLVYVFMSKGSLA---------SHLYDENY----GPLTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L          + +         G LT    + IA  +A
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132

Query: 221 RGLEYL 226
            G+ YL
Sbjct: 133 SGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 60.0 bits (145), Expect = 8e-11
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
               IG G FG V+         VA+K +  +    E++F  E  ++ +L H  LV L G
Sbjct: 8   LVQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYG 66

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            C E+    LV+ FM  G L+ +L  +  G  +    + + LDV  G+ YL      H
Sbjct: 67  VCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIH 123

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 8e-11
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 11/114 (9%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE--FQT---EVMLLGRLHHRNLVNL 173
           +G+G +G VYKA+   TGE VA+K +  D+   E+E    T   E+ LL  L H N+V L
Sbjct: 7   LGEGTYGVVYKARDKKTGEIVALKKIRLDN---EEEGIPSTALREISLLKELKHPNIVKL 63

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           +     + +  LV+ +     L  +L D+  GPL+ NL   I   + RGL Y H
Sbjct: 64  LDVIHTERKLYLVFEYCDM-DLKKYL-DKRPGPLSPNLIKSIMYQLLRGLAYCH 115

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 58.5 bits (141), Expect = 3e-10
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 27/150 (18%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQ-----MSTGETVAVKVLAT-DSKQGEKEFQTEVML 161
           +L  +   F   +G+ AFG +YK       M   + VA+K L   ++ Q   EFQ E  L
Sbjct: 1   ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASL 60

Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY------------DENYGPLTW 209
           +  LHH N+V L+G   ++    +++ ++++G L   L             DE+ G +  
Sbjct: 61  MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDED-GTVKS 119

Query: 210 NLR----VHIALDVARGLEYLHDGVSCHLF 235
           +L     +HIA+ +A G+EYL    S H F
Sbjct: 120 SLDHGDFLHIAIQIAAGMEYL----SSHFF 145

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEF-QTEVMLLGRLHHRNLVNLVGY 176
            IG+G+FG VYKA    T + VA+KV+  +  + E E  Q E+  L +     +    G 
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYG- 66

Query: 177 CAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              KG  + ++  +   GS    L     G L       I  +V  GLEYLH+
Sbjct: 67  SFLKGSKLWIIMEYCGGGSCLDLL---KPGKLDETYIAFILREVLLGLEYLHE 116

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 116 FTTLIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   + +  ++F+ E+ +L  L H N+
Sbjct: 8   FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI 67

Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           V   G C   G+    LV  ++  GSL  +L  ++   L     +  A  + +G+EYL
Sbjct: 68  VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL-QKHRERLDHRKLLLYASQICKGMEYL 124

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 1/107 (0%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V++   +    VAVK L   +    K+F  E  ++ +L H  L+ L   C  
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTL 72

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    +V   M  GSL  +L       L     + +A  VA G+ YL
Sbjct: 73  EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL 119

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 57.7 bits (139), Expect = 6e-10
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 28/133 (21%)

Query: 120 IGQGAFGPVYKAQM--------STGETVAVKVL---ATDSKQGEKEFQTEVM-LLGRLHH 167
           +G+G FG V +A+             TVAVK+L   ATD    +   + E+M L+G+  H
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGK--H 77

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-------DENY-------GPLTWNLRV 213
           +N++NL+G C ++G   ++  + +KG+L   L        D  +         L++   V
Sbjct: 78  KNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLV 137

Query: 214 HIALDVARGLEYL 226
             A  VARG+EYL
Sbjct: 138 SCAYQVARGMEYL 150

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.9 bits (138), Expect = 7e-10
 Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLVGY 176
           +G G FG V+    +    VAVK L    K G    + F  E  ++ +L H  LV L   
Sbjct: 14  LGAGQFGEVWMGTWNGTTKVAVKTL----KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAV 69

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           C+E+    +V  +MSKGSL   L       L     V +A  +A G+ YL
Sbjct: 70  CSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYL 119

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 16/124 (12%)

Query: 119 LIGQGAFGPVYKAQMSTGET----VAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G+G FG V + Q+S  +     VAVK +  D  +    +EF +E   +    H N++ 
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65

Query: 173 LVGYCAEKGQH------MLVYVFMSKGSLASHLYDENYGPLTWNLRVH----IALDVARG 222
           L+G C E          M++  FM  G L S L     G L   L +       +D+A G
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125

Query: 223 LEYL 226
           +EYL
Sbjct: 126 MEYL 129

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 21/126 (16%)

Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S    K+F  E  LL  L H ++V  
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-------------LTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L   L    +GP             LT +  +HIA  +A
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130

Query: 221 RGLEYL 226
            G+ YL
Sbjct: 131 AGMVYL 136

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 17/130 (13%)

Query: 120 IGQGAFGPVYK---AQMSTGE---TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +GQG+FG VY+     +  GE    VA+K +  ++   E+ EF  E  ++   +  ++V 
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHL--------YDENYGPLTWNLRVHIALDVARGL 223
           L+G  +  GQ  LV +  M+KG L S+L         +   GP T    + +A ++A G+
Sbjct: 74  LLGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM 132

Query: 224 EYLHDGVSCH 233
            YL      H
Sbjct: 133 AYLAAKKFVH 142

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 14/120 (11%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDS--KQGEKE-------FQTEVMLLGRLHHR 168
           LIG G+FG VY     S+GE +AVK +   S     +            E+ LL  L H 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 169 NLVNLVGYCAEKGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           N+V  +G  +    H+ +++ ++  GS+A+ L   NYG     L  +    + +GL YLH
Sbjct: 67  NIVQYLG-SSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLNYLH 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 119 LIGQGAFGPVYKAQMSTGET----VAVKVLA--TDSKQGEKEFQTEVMLLGRLHHRNLVN 172
           +IG+G FG VY   +   +      AVK L   TD ++ E+ F  E +++    H N+++
Sbjct: 2   VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQ-FLKEGIIMKDFSHPNVLS 60

Query: 173 LVGYC-AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           L+G C   +G  ++V  +M  G L + +  E + P   +L +   L VA+G+EYL
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDL-IGFGLQVAKGMEYL 114

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           F   +G G FG V+  +      VA+K +  +    E++F  E  ++ +L H  LV L G
Sbjct: 8   FMKELGSGQFGVVHLGKWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYG 66

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            C ++    +V  FM  G L ++L  +  G L+ ++ + +  DV  G+EYL
Sbjct: 67  VCTQQKPLYIVTEFMENGCLLNYL-RQRQGKLSKDMLLSMCQDVCEGMEYL 116

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 55.0 bits (132), Expect = 4e-09
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYC 177
           L+G+G FG V+K  +     VAVK    D  Q  K +F +E  +L +  H N+V L+G C
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            ++    +V   +  G   S L  +     T  L V  ALD A G+ YL
Sbjct: 62  TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQL-VKFALDAAAGMAYL 109

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 120 IGQGAFGPVYKA--QMSTGE--TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G G FG V K    M +G+   VAVK L       G+KEF  E  ++ +L H  +V L+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G C  +   MLV      G L  +L      P++ +L+  +A  VA G+ YL
Sbjct: 63  GVCKGE-PLMLVMELAPLGPLLKYLKKRREIPVS-DLKE-LAHQVAMGMAYL 111

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 21/126 (16%)

Query: 119 LIGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQ-----TEVMLLGRLHHR 168
           L+ +G FG ++       +    E V VK +    K    E Q      E  LL  L H+
Sbjct: 13  LLQEGTFGRIFYGILIDEKPGKEEEVFVKTV----KDHASEIQVTLLLQESCLLYGLSHQ 68

Query: 169 NLVNLVGYCAEKGQH-MLVYVFMSKGSLASHLYDENYGP------LTWNLRVHIALDVAR 221
           N++ ++  C E G+   ++Y +M+ G+L   L     G       L+    VH+A+ +A 
Sbjct: 69  NILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128

Query: 222 GLEYLH 227
           G+ YLH
Sbjct: 129 GMSYLH 134

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 16/124 (12%)

Query: 119 LIGQGAFGPVYKAQM----STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G+G FG V +AQ+     + + VAVK+L  D  S    +EF  E   +    H N++ 
Sbjct: 6   MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK 65

Query: 173 LVGYCAE---KGQ---HMLVYVFMSKGSLASHLYDENYG--PLTWNLR--VHIALDVARG 222
           L+G       KG+    M++  FM  G L + L     G  P T  L+  V   +D+A G
Sbjct: 66  LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125

Query: 223 LEYL 226
           +EYL
Sbjct: 126 MEYL 129

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 11/116 (9%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VY+A+  ++GE VA+K +  D+++      +  E+ LL  L H N+V L   
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEV 74

Query: 177 CAEKGQHMLVYVFMSKG----SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
               G+H L  +F+        LAS L D    P + +    + L + RGL+YLH+
Sbjct: 75  VV--GKH-LDSIFLVMEYCEQDLAS-LLDNMPTPFSESQVKCLMLQLLRGLQYLHE 126

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 54.5 bits (131), Expect = 7e-09
 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 11/116 (9%)

Query: 120 IGQGAFGPV--YK---AQMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V  Y    A   TGE VAVK L  +  +Q    ++ E+ +L  L+H N+V  
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G C+E+G     L+  ++  GSL  +L           L    A  +  G+ YLH
Sbjct: 72  KGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLL---FAQQICEGMAYLH 124

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 54.1 bits (131), Expect = 7e-09
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 16/117 (13%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ------TEVMLLGRLHHRNLVN 172
           +G+G+FG V   +   TG+  A+KVL    K+   + +      TE  +L R++H  +V 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVL---KKKKIIKRKEVEHTLTERNILSRINHPFIVK 57

Query: 173 LVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           L  + A + +  L  V  +   G L SHL  E         R + A ++   LEYLH
Sbjct: 58  L--HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEER-ARFYAA-EIVLALEYLH 110

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 54.1 bits (130), Expect = 8e-09
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           ++G+G +G VY A+ +ST   +A+K +     +  +    E+ L   L HRN+V  +G  
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI--ALDVARGLEYLHD 228
           +E G    +++    G   S L    +GPL  N +  I     +  GL+YLHD
Sbjct: 75  SENG-FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG---ETVAVKVLAT-DSKQGEKEFQTEVML 161
           Y  L+     F  +IG+G FG V KA++         A+K +    SK   ++F  E+ +
Sbjct: 1   YPVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 60

Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------------ASHLYDENYGP 206
           L +L HH N++NL+G C  +G   L   +   G+L              A  + +     
Sbjct: 61  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 120

Query: 207 LTWNLRVHIALDVARGLEYL 226
           L+    +H A DVARG++YL
Sbjct: 121 LSSQQLLHFAADVARGMDYL 140

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G G FG V+  +      VA+K++    ++G   E +F  E  ++ +L H NLV L G 
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMI----REGAMSEDDFIEEAKVMMKLSHPNLVQLYGV 67

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           C ++    +V  +M+ G L ++L  E  G L     + +  DV   +EYL
Sbjct: 68  CTKQRPIFIVTEYMANGCLLNYL-RERKGKLGTEWLLDMCSDVCEAMEYL 116

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 20/127 (15%)

Query: 120 IGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   +    K+FQ E  LL  L H ++V  
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 174 VGYCAEKGQHMLVYVFMSKGSL----------ASHLYD----ENYGPLTWNLRVHIALDV 219
            G C +    ++V+ +M  G L          A  L D    +  G L  +  +HIA  +
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132

Query: 220 ARGLEYL 226
           A G+ YL
Sbjct: 133 ASGMVYL 139

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 27/139 (19%)

Query: 115 NFTTLIGQGAFGPVYKAQM----------------STGET-VAVKVLATD-SKQGEKEFQ 156
           NF   +G+G FG V+  +                 +     VAVKVL  D S    ++F 
Sbjct: 8   NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFL 67

Query: 157 TEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD---------ENYGPL 207
            EV +L RL   N+  L+G C       ++  +M  G L   L            N   L
Sbjct: 68  KEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSL 127

Query: 208 TWNLRVHIALDVARGLEYL 226
           +++  +++A  +A G+ YL
Sbjct: 128 SFSTLLYMATQIASGMRYL 146

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           L+G+G++G V K +   TG+ VA+K    + D K  +K    E+ +L +L H NLVNL+ 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENY-GPLTWNLRVHIALDVARGLEYLH 227
               K +  LV+ F+    L      E Y   L  +        + RG+E+ H
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLDDL---EKYPNGLDESRVRKYLFQILRGIEFCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLA-TDSKQGEKEFQTEVMLLGRL 165
           DL++        +GQG+ G VYK +   TG+  A+K +     ++  K+   E+  L   
Sbjct: 2   DLERVKV-----LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC 56

Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
               +V   G   ++G+  +V  +M  GSLA  L     G +   +  +IA  + +GL+Y
Sbjct: 57  ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDY 114

Query: 226 LH 227
           LH
Sbjct: 115 LH 116

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)

Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + ++  TVAVK+L   +   E K   TE+ +L  + HH N+V
Sbjct: 15  LGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVV 74

Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V +   G+L+++L
Sbjct: 75  NLLGACTKPGGPLMVIVEYCKFGNLSNYL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 32/159 (20%)

Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    ++ +        +G+G FG V  A+         +    VAVK+L +D
Sbjct: 2   VSEYELPEDPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD 61

Query: 148 SKQGEKEF-----QTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-- 199
           +   EK+      + E+M ++G+  H+N++NL+G C + G   ++  + SKG+L  +L  
Sbjct: 62  AT--EKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 117

Query: 200 ---------YDENYGP---LTWNLRVHIALDVARGLEYL 226
                    Y+    P   L++   V  A  VARG+EYL
Sbjct: 118 RRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL 156

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%)

Query: 116 FTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-HH 167
           F   +G GAFG V +A      +      VAVK+L   +   E+E   +E+ ++  L +H
Sbjct: 39  FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH 98

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            N+VNL+G C   G  +++  +   G L + L  +    LT    +  +  VA+G+ +L
Sbjct: 99  ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 32/135 (23%)

Query: 120 IGQGAFGPVYKAQM--------STGETVAVKVLATDSKQGEKEF-----QTEVM-LLGRL 165
           +G+G FG V  A+             TVAVK+L  D+   EK+      + E+M ++G+ 
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGK- 79

Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-----------YDENYGP---LTWNL 211
            H+N++NL+G C + G   ++  + SKG+L  +L           YD    P   +T+  
Sbjct: 80  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD 138

Query: 212 RVHIALDVARGLEYL 226
            V     VARG+EYL
Sbjct: 139 LVSCTYQVARGMEYL 153

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 3e-08
 Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 19/120 (15%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-F-QT---EVMLLGRLHHRNLVNL 173
           IG+G +G VYKA+   TGE VA+K +  ++   EKE F  T   E+ LL +L H N+V L
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMEN---EKEGFPITAIREIKLLQKLRHPNIVRL 63

Query: 174 VGYCAE--KGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                   KG   +V+ +M     G L S          T +        +  GL+YLH 
Sbjct: 64  KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEV-----KFTESQIKCYMKQLLEGLQYLHS 118

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 21/119 (17%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGE--KEFQTEVMLLGRLHHRNLVNLVGY 176
           IG G FG VY A  + TGE +AVK +       +  KE   E+ +L  L H NLV   G 
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 177 CAEKGQHMLVYVFM---SKGSLASHLY-----DENYGPLTWNLRVHIALDVARGLEYLH 227
              + +   VY+FM   S G+L   L      DE+       +RV+  L +  GL YLH
Sbjct: 68  EVHREK---VYIFMEYCSGGTLEELLEHGRILDEHV------IRVY-TLQLLEGLAYLH 116

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 5/111 (4%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLA--TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +    +S+   K    E+ LL  L+H N++ L+  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
              KG   LV+ FM    L   L  +    L  +L       + +GL + H
Sbjct: 67  FRHKGDLYLVFEFM-DTDLY-KLIKDRQRGLPESLIKSYLYQLLQGLAFCH 115

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V   +      VA+K++   S   E EF  E  ++ +L H  LV L G C +
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK 70

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    +V  +MS G L ++L +         L + +  DV  G+ YL
Sbjct: 71  QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQL-LEMCKDVCEGMAYL 116

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 14/130 (10%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQ---T 157
           PE  + DL++        IG G+FG VY A+   T E VA+K ++   KQ  +++Q    
Sbjct: 13  PEKLFTDLRE--------IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           EV  L +L H N +   G C  +     + +    GS AS + + +  PL       I  
Sbjct: 65  EVRFLQQLRHPNTIEYKG-CYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICH 122

Query: 218 DVARGLEYLH 227
              +GL YLH
Sbjct: 123 GALQGLAYLH 132

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLVG 175
           I +GA+G V+ A+  STG+  A+KV+       +    +  TE  +L +     +V L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL-- 58

Query: 176 YCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           Y + +G+  L  V  ++  G LAS L  EN G L  ++      ++   LEYLH
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLL--ENVGSLDEDVARIYIAEIVLALEYLH 110

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 51.2 bits (122), Expect = 8e-08
 Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKE---FQTEVMLLGRLHHRNLVN 172
           L+GQGAFG VY      TG  +AVK +  D  S +  KE    + E+ LL  L H  +V 
Sbjct: 9   LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 173 LVGYCAEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
             G C        + +FM     GS+   L  ++YG LT N+       +  G+ YLH  
Sbjct: 69  YYG-CLRDPMERTLSIFMEHMPGGSIKDQL--KSYGALTENVTRKYTRQILEGVSYLHSN 125

Query: 230 VSCH 233
           +  H
Sbjct: 126 MIVH 129

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 51.6 bits (123), Expect = 9e-08
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 28/133 (21%)

Query: 120 IGQGAFGPVYKAQM--------STGETVAVKVL---ATDSKQGEKEFQTEVM-LLGRLHH 167
           +G+G FG V  A+         +   TVAVK+L   ATD    +   + E+M ++G+  H
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGK--H 77

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-----------YDENYGP---LTWNLRV 213
           +N++NL+G C + G   ++  + SKG+L  +L           +D    P   LT+   V
Sbjct: 78  KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLV 137

Query: 214 HIALDVARGLEYL 226
             A  VARG+EYL
Sbjct: 138 SCAYQVARGMEYL 150

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 51.3 bits (122), Expect = 9e-08
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           L+G G +G VYK + + TG+  A+KV+     + E+E + E+ +L +  HHRN+    G 
Sbjct: 13  LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 71

Query: 177 CAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
             +K       Q  LV  F   GS+   + +     L      +I  ++ RGL +LH   
Sbjct: 72  FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 131

Query: 231 SCH 233
             H
Sbjct: 132 VIH 134

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKAQ   TG   A K++  +S++  ++F  E+ +L    H N+V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            + +  ++  F   G+L S +  E    LT     ++   +   L +LH 
Sbjct: 73  YENKLWILIEFCDGGALDS-IMLELERGLTEPQIRYVCRQMLEALNFLHS 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           IG G +G VYKA+ ++TGE  A+KV+  +  +     Q E++++    H N+V   G   
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL 76

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            + +  +   F   GSL   +Y    GPL+ +   +++ +  +GL YLH     H
Sbjct: 77  RRDKLWICMEFCGGGSLQD-IYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMH 129

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 50.6 bits (121), Expect = 1e-07
 Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +IG G FG V + ++         VA+K L +  +++  ++F +E  ++G+  H N+++L
Sbjct: 11  VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHL 70

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G   +    M++  FM  G+L S L  +N G  T    V +   +A G++YL +
Sbjct: 71  EGVVTKSRPVMIITEFMENGALDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYLSE 124

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 50.6 bits (121), Expect = 1e-07
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 17/122 (13%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVK---VLATDSKQGE-------KEFQTEVMLLGRLHH 167
           LIG+G +G VY A  ++TGE +AVK   + AT + + +       K  ++E+  L  L H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 168 RNLVNLVGYCAEKGQHML-VYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
            N+V  +G+  E  +  L +++ ++  GS+ S L    YG     L       V  GL Y
Sbjct: 68  LNIVQYLGF--ETTEEYLSIFLEYVPGGSIGSCL--RTYGRFEEQLVRFFTEQVLEGLAY 123

Query: 226 LH 227
           LH
Sbjct: 124 LH 125

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 12/128 (9%)

Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
           L++       ++G GAFG VYK   +  GETV    A+K+L  T   +   EF  E +++
Sbjct: 4   LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 63

Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
             + H +LV L+G C       LV   M  G L  ++++  +N G     L ++  + +A
Sbjct: 64  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGS---QLLLNWCVQIA 119

Query: 221 RGLEYLHD 228
           +G+ YL +
Sbjct: 120 KGMMYLEE 127

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 120 IGQGAFGPVYKAQMSTGET---VAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNL 173
           IG+G +G VYKA+   G+     A+K    D +Q     Q+   E+ LL  L H N+V+L
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 174 VGYCAEKGQHMLVYVF 189
           V    E     +  +F
Sbjct: 68  VEVFLEHADKSVYLLF 83

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 10/123 (8%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKE---FQTEVMLLGRLHHRNLVN 172
           L+G+GAFG VY      TG  +AVK +  D  S++  KE    + E+ LL  L H  +V 
Sbjct: 9   LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 173 LVGYCAEKGQHML-VYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
             G   +  +  L ++V +M  GS+   L  + YG LT N+       + +G+ YLH  +
Sbjct: 69  YYGCLRDPEEKKLSIFVEYMPGGSIKDQL--KAYGALTENVTRRYTRQILQGVSYLHSNM 126

Query: 231 SCH 233
             H
Sbjct: 127 IVH 129

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 21/120 (17%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           ++G+GA+G V K +  +TGE VA+K    + D +  +K    EV +L +L H N+VNL  
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPL--------TWNLRVHIALDVARGLEYLH 227
               KG+  LV+ ++ +  L   L + + G L         W L         + + Y H
Sbjct: 68  AFRRKGRLYLVFEYVERTLL--ELLEASPGGLPPDAVRSYIWQL--------LQAIAYCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)

Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 15  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 74

Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V F   G+L+++L
Sbjct: 75  NLLGACTKPGGPLMVIVEFCKFGNLSNYL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 41/140 (29%)

Query: 116 FTTL--IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQT----EVMLLGRLHH 167
           F  +  IG+G +G VYKA+   TGE VA+K +  D+   EKE F      E+ +L +L+H
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDN---EKEGFPITAIREIKILRQLNH 65

Query: 168 RNLVNL----------VGYCAEKGQHMLVYVFMSK---GSLASHLYDENYGPLTWNLRVH 214
           RN+VNL          + +  +KG   LV+ +M     G L S L   +          H
Sbjct: 66  RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFS--------EDH 117

Query: 215 IA------LDVARGLEYLHD 228
           I       L+   GL Y H 
Sbjct: 118 IKSFMKQLLE---GLNYCHK 134

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           ++G G +G VYK + + TG+  A+KV+     + E+E + E+ +L +  HHRN+    G 
Sbjct: 23  VVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEINMLKKYSHHRNIATYYGA 81

Query: 177 CAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             +K       Q  LV  F   GS+   + +     L  +   +I  ++ RGL +LH
Sbjct: 82  FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +IG G FG V++  +         VA+K L    +++  ++F +E  ++G+  H N++ L
Sbjct: 12  VIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G   +    M++  +M  G+L  +L D + G  +    V +   +A G++YL D
Sbjct: 72  EGVVTKFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD 125

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 17/83 (20%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQT----EV 159
           Y+ L K        IGQG FG V+KA+   T + VA+K VL  + K+G   F      E+
Sbjct: 14  YEKLAK--------IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG---FPITALREI 62

Query: 160 MLLGRLHHRNLVNLVGYCAEKGQ 182
            +L  L H N+VNL+  C  K  
Sbjct: 63  KILQLLKHENVVNLIEICRTKAT 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
           IG GA   VY A  +   E VA+K +  +  Q    E + EV  + + +H N+V      
Sbjct: 9   IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68

Query: 178 AEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHD 228
               +  LV  ++S GSL   +      G L   +   +  +V +GLEYLH 
Sbjct: 69  VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS 120

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVM 160
           IP  S + ++K        +G G FG V+    +    VAVK L   +   E  F  E  
Sbjct: 3   IPRESLQLIKK--------LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPES-FLEEAQ 53

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++ +L H  LV L    +E+  + +V  +MSKGSL   L D     L     V +A  VA
Sbjct: 54  IMKKLRHDKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVA 112

Query: 221 RGLEYL 226
            G+ Y+
Sbjct: 113 AGMAYI 118

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKE---FQTEVMLLGRLHHRNLVN 172
           L+GQGAFG VY    + TG  +A K +  D  S +  KE    + E+ LL  L H  +V 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 173 LVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
             G   ++ +  L     +M  GS+   L  + YG LT ++       +  G+ YLH  +
Sbjct: 69  YYGCLRDRAEKTLTIFMEYMPGGSVKDQL--KAYGALTESVTRKYTRQILEGMSYLHSNM 126

Query: 231 SCH 233
             H
Sbjct: 127 IVH 129

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 14/119 (11%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVN 172
            +G+G +  VYKA    TG  VA+K +    ++  K+   F    E+ LL  L H N++ 
Sbjct: 7   KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG 66

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI---ALDVARGLEYLHD 228
           L+     K    LV+ FM    L   +  +    LT      I    L   RGLEYLH 
Sbjct: 67  LLDVFGHKSNINLVFEFME-TDL-EKVIKDKSIVLT---PADIKSYMLMTLRGLEYLHS 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 35/154 (22%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGET-----------------VAVKVLATD-SK 149
              +    F   +G+G FG V+  ++   +                  VAVK+L  D +K
Sbjct: 1   KFPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK 60

Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS----LASHLYDENYG 205
               +F  EV +L RL   N++ L+G C ++    ++  +M  G     L+SH  D+   
Sbjct: 61  NARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEE 120

Query: 206 P-------------LTWNLRVHIALDVARGLEYL 226
                         ++++  +H+AL +A G++YL
Sbjct: 121 NGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 120 IGQGAFGPVYKAQMSTGETVA---VKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           IG G FG V   +   G + A   VK L A+ +   +  F  EV     L+H N++  +G
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDEN---YGPLTWNLRVHIALDVARGLEYLH 227
            C E   ++LV  F   G L ++L             ++   +A +VA GL +LH
Sbjct: 63  QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH 117

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 49.0 bits (118), Expect = 4e-07
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 19/122 (15%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL-ATDSKQGEKEF-QTEVMLLGRLHHRNLVNLVG 175
            IG+G+FG VY  +  S G+   +K +  ++  + E+E    EV +L +L+H N++    
Sbjct: 7   QIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE 66

Query: 176 YCAEKGQHMLVYVFM---SKGSLASHL--YDENYGPLT----WNLRVHIALDVARGLEYL 226
              EKG    + + M     G L+  +    +   P       +  V + L     L+YL
Sbjct: 67  SFEEKG---KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCL----ALKYL 119

Query: 227 HD 228
           H 
Sbjct: 120 HS 121

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ------GEKEFQTEVMLLGRL-HH 167
           F  +IG+G+F  V  A+   T +  A+K+L    K+        K  + E  +L RL  H
Sbjct: 5   FGKIIGEGSFSTVVLAKEKETNKEYAIKIL---DKRQLIKEKKVKYVKIEKEVLTRLNGH 61

Query: 168 RNLVNLVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
             ++ L  Y   + +  L +V  +   G L  ++    YG L        A ++   LEY
Sbjct: 62  PGIIKL--YYTFQDEENLYFVLEYAPNGELLQYI--RKYGSLDEKCTRFYAAEILLALEY 117

Query: 226 LHD 228
           LH 
Sbjct: 118 LHS 120

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 48.8 bits (116), Expect = 6e-07
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 19/137 (13%)

Query: 116 FTTLIGQGAFGPVYKAQMSTG---ETVAVKVLAT-DSKQGEKEFQTEVMLLGRL-HHRNL 170
           F  +IG+G FG V +A +         A+K+L    S+   ++F  E+ +L +L HH N+
Sbjct: 6   FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI 65

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL-----------YDENYG---PLTWNLRVHIA 216
           +NL+G C  +G   +   +   G+L   L           + + +G    LT    +  A
Sbjct: 66  INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125

Query: 217 LDVARGLEYLHDGVSCH 233
            DVA G++YL +    H
Sbjct: 126 SDVATGMQYLSEKQFIH 142

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 48.9 bits (116), Expect = 6e-07
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKA+   TG   A KV+ T S++  +++  E+ +L   +H  +V L+G   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             G+  ++  F   G++ + + + + G     ++V I   +   L+YLH
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-ICRQMLEALQYLH 127

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 48.4 bits (115), Expect = 8e-07
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 29/138 (21%)

Query: 118 TLIGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNL 170
             +G+G FG V KA        +   TVAVK+L  ++   E ++  +E  LL +++H ++
Sbjct: 6   KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV 65

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL--------------------YDENYG--PLT 208
           + L G C++ G  +L+  +   GSL S L                    Y +N     LT
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 209 WNLRVHIALDVARGLEYL 226
               +  A  ++RG++YL
Sbjct: 126 MGDLISFAWQISRGMQYL 143

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 48.4 bits (115), Expect = 9e-07
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 9/115 (7%)

Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V   +      +TGE VAVK L  +S      + + E+ +L  L+H N+V  
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            G C E G +   L+  F+  GSL  +L   N   +    ++  A+ + +G++YL
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYL-PRNKNKINLKQQLKYAVQICKGMDYL 125

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 120 IGQGAFGPVYKAQMSTGET---VAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           IG G FG V   ++++G T   V VK L  + S Q + +F  E      L H NL+  +G
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRV--HIALDVARGLEYLH 227
            C E   ++LV  F   G L  +L        +T +      +A ++A GL +LH
Sbjct: 63  QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTEV 159
           ++  +T  F   +G+  FG VYK  +   + GE    VA+K L  D  +G   +EF+ E 
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTL-KDKAEGPLREEFKHEA 59

Query: 160 MLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DENY---G 205
           M+  RL H N+V L+G   ++    +++ + S   L   L            D++     
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKS 119

Query: 206 PLTWNLRVHIALDVARGLEYLHDGVSCH 233
            L     VHI   +A G+E+L      H
Sbjct: 120 TLEPADFVHIVTQIAAGMEFLSSHHVVH 147

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H  LV L    +E
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 72

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+
Sbjct: 73  EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 118

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 105 SYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT-EVMLL 162
           ++K L+K        +G+G +  VYK +  +TGE VA+K +  D+++G       E+ L+
Sbjct: 1   NFKQLEK--------LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLM 52

Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDV 219
             L H N+V L      + + MLV+ +M    K  + +H      G L  N        +
Sbjct: 53  KELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTH---GVRGALDPNTVKSFTYQL 109

Query: 220 ARGLEYLHD 228
            +G+ + H+
Sbjct: 110 LKGIAFCHE 118

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           P++ Y+ +Q+        +G G +G VYKA+ + TGE  AVK++  +        Q E+ 
Sbjct: 7   PQHDYELIQR--------VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIF 58

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++    H N+V   G    + +  +   +   GSL   +Y    GPL+     ++  +  
Sbjct: 59  MVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQD-IYHVT-GPLSELQIAYVCRETL 116

Query: 221 RGLEYLHDGVSCH 233
           +GL YLH     H
Sbjct: 117 QGLAYLHSKGKMH 129

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 6/114 (5%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
           +G+G FG V   QM +TG+  A K L     +  K ++    E  +L ++H R +V+L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLH 227
               K    LV   M+ G L  H+Y  DE                +  GLE+LH
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH 114

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLAT---DSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           +G+G FG V   Q+ +TG+  A K L       ++GE+    E  +L ++  R +V+L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 176 YCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           Y  E    + LV   M+ G L  H+Y+           +  A  +  GLE+LH
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH 112

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 117 TTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLV 174
             LIG+GA+G VY+   + TG  VA+K++  D+   +  + Q EV LL +L      N+ 
Sbjct: 6   LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNIT 65

Query: 175 GY 176
            Y
Sbjct: 66  KY 67

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY-- 176
           +G G  G V K     TG+ +AVK +  +    E   +  +  L  LH  N   +VG+  
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYG 66

Query: 177 -CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                G   +   +M  GSL   +  E  G +   +   IA+ V +GL YLH+
Sbjct: 67  AFYNNGDISICMEYMDGGSLDK-ILKEVQGRIPERILGKIAVAVLKGLTYLHE 118

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 120 IGQGAFGPVYKAQMSTGET---VAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+G FG V + Q++  ++   VAVK +  A  ++   ++F +E + +    H N++ L+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 175 GYCAEKGQH------MLVYVFMSKGSLASHLYDENYGP----LTWNLRVHIALDVARGLE 224
           G C +  +       +++  FM  G L S L     G     L   + V    D+A G+E
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 225 YL 226
           YL
Sbjct: 127 YL 128

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 18/118 (15%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--------EVMLLGRL-HHRN 169
           +G G FG VY A+   TGE VA+K +       +K+F +        EV  L +L  H N
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKM-------KKKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           +V L     E  +   V+ +M +G+L   + D    P + ++   I   + +GL ++H
Sbjct: 60  IVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH 116

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           +IG+G +G VYKA+   TG+ VA+K++     + E+E + E  +L +  +H N+    G 
Sbjct: 13  VIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSNHPNIATFYGA 71

Query: 177 CAEKG------QHMLVYVFMSKGS---LASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             +K       Q  LV      GS   L   L  +    L      +I  +  RGL YLH
Sbjct: 72  FIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKG-KRLKEEWIAYILRETLRGLAYLH 130

Query: 228 D 228
           +
Sbjct: 131 E 131

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 9/66 (13%)

Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVK-VLATDSKQGEKEF----QTEVMLLGRLHHR 168
                +G+G FG VYKA Q+ TG  VA+K +L  + K G   F      E+ +L +L H 
Sbjct: 11  EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG---FPITALREIKILKKLKHP 67

Query: 169 NLVNLV 174
           N+V L+
Sbjct: 68  NVVPLI 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 13/117 (11%)

Query: 119 LIGQGAFGPVYKA--QMSTGE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
            IG+G FG VY+        E   VAVK     +    +E F  E  ++ +  H ++V L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 174 VGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           +G   E      V++ M     G L S+L    Y  L     +  +  ++  L YL 
Sbjct: 73  IGVITE----NPVWIVMELAPLGELRSYLQVNKYS-LDLASLILYSYQLSTALAYLE 124

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 116 FTTLIGQGAFGPVYKAQ-MSTGE-----TVAVKVLATDSKQGEKE-FQTEVMLLGRL-HH 167
           F   +G GAFG V +A     G+      VAVK+L   +   E+E   +E+ +L  L  H
Sbjct: 42  FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH 101

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
           +N+VNL+G C   G  +++  +   G L + L
Sbjct: 102 KNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H  LV L    +E
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEA-FLQEAQIMKKLRHDKLVPLYAVVSE 72

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +  + +V  FM KGSL   L + +   L     V +A  +A G+ Y+
Sbjct: 73  EPIY-IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYI 118

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 46.1 bits (109), Expect = 4e-06
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 12/123 (9%)

Query: 119 LIGQGAFGPVYKA-QMSTGET----VAVKVLATDSKQGEKEFQ--TEVML-LGRLHHRNL 170
           L+G G FG V+K   +  G++    VA+K +    + G + FQ  T+ ML +G L H  +
Sbjct: 14  LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTI--QDRSGRQTFQEITDHMLAMGSLDHAYI 71

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV 230
           V L+G C       LV      GSL  H+  ++   L     ++  + +A+G+ YL +  
Sbjct: 72  VRLLGICP-GASLQLVTQLSPLGSLLDHV-RQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129

Query: 231 SCH 233
             H
Sbjct: 130 MVH 132

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 46.2 bits (109), Expect = 5e-06
 Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 120 IGQGAFGPVYKAQMSTGET-VAVK----VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           IG+G FG V+  ++    T VAVK     L  D K    +F  E  +L +  H N+V L+
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 59

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRVHIALDVARGLEYLHDGVSCH 233
           G C +K    +V   +  G   + L  E  GP L     + +  + A G+EYL      H
Sbjct: 60  GVCTQKQPIYIVMELVQGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKHCIH 117

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 45.9 bits (108), Expect = 6e-06
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 14/136 (10%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---T 157
           PE  + DL++        IG G+FG VY A+ + T E VA+K ++   KQ  +++Q    
Sbjct: 23  PEKLFTDLRE--------IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIK 74

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           EV  L R+ H N +   G C  +     + +    GS AS L + +  PL       I  
Sbjct: 75  EVKFLQRIKHPNSIEYKG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITH 132

Query: 218 DVARGLEYLHDGVSCH 233
              +GL YLH     H
Sbjct: 133 GALQGLAYLHSHNMIH 148

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 45.8 bits (108), Expect = 8e-06
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 13/92 (14%)

Query: 119 LIGQGAFGPVYKAQM------STGETVAVKVL---ATDSKQGEKEFQTEVMLLGRL-HHR 168
           ++G GAFG V +A        S+  TVAVK+L   AT S+   K   +E+ +L  + +H 
Sbjct: 14  VLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEH--KALMSELKILIHIGNHL 71

Query: 169 NLVNLVGYCAE-KGQHMLVYVFMSKGSLASHL 199
           N+VNL+G C +  G  M++  F   G+L++ L
Sbjct: 72  NVVNLLGACTKPNGPLMVIVEFCKYGNLSNFL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 120 IGQGAFGPVYKA----QMSTGET----VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV 171
           +GQG F  ++K         GE     V +KVL    +   + F     ++ +L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEYLHD 228
              G C    + ++V  ++  GSL ++L  ++N   ++W L V  A  +A  L +L D
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEV--AKQLAWALHFLED 118

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 45.4 bits (107), Expect = 9e-06
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---T 157
           PE  + DL++        IG G+FG VY A+ +   E VA+K ++   KQ  +++Q    
Sbjct: 13  PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           EV  L +L H N +   G C  +     + +    GS AS L + +  PL       +  
Sbjct: 65  EVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTH 122

Query: 218 DVARGLEYLHD 228
              +GL YLH 
Sbjct: 123 GALQGLAYLHS 133

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 24/192 (12%)

Query: 62  ILSDSTVGPESPVKSGRNG------NGKSMWLEGFKRSNVVSASGIPEYSYK-DLQKA-- 112
           I  D  +  E   K+ + G      N K +  E    +N        E     D+ ++  
Sbjct: 6   IDEDINIYEEKNHKANKGGSGKFEMNDKKLDEEERSHNNNAGEDEDEEKMIDNDINRSPN 65

Query: 113 -TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
            +     +IG G+FG VY+A  + T E VA+K +  D +   +    E++++  L+H N+
Sbjct: 66  KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR----ELLIMKNLNHINI 121

Query: 171 VNLVGY----CAEKGQ-HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI----ALDVAR 221
           + L  Y    C +K + ++ + V M       H Y ++Y      L + +    +  + R
Sbjct: 122 IFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCR 181

Query: 222 GLEYLHDGVSCH 233
            L Y+H    CH
Sbjct: 182 ALAYIHSKFICH 193

Length = 440

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLHHRNLVNLVGY 176
           IG+GA G V+KA+   TGETVA+K +A    +G    Q   E+  L    H  +V L+  
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67

Query: 177 CAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
               G    LV  +M    L+  L DE   PL           + +G+ Y+H
Sbjct: 68  FPH-GSGFVLVMEYMP-SDLSEVLRDEER-PLPEAQVKSYMRMLLKGVAYMH 116

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 17/119 (14%)

Query: 120 IGQGAFGPVY--KAQMSTGETVAVKVLATDSKQGEKEF-QTEVMLLGRLHHRNLVNLVGY 176
           IG+G+FG +Y  KA+  +   V  ++  T     EKE  + EV+LL ++ H N+V     
Sbjct: 8   IGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFAS 67

Query: 177 CAEKGQHMLVYVFMSKGSLASH-------LYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             E G+  +V  +   G L          L+ E+   L+W   V I+L    GL+++HD
Sbjct: 68  FQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ-ILSW--FVQISL----GLKHIHD 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 116 FTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-HH 167
           F   +G GAFG V +A      +     TVAVK+L   +   E+E   +E+ +L  L +H
Sbjct: 39  FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 98

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
            N+VNL+G C   G  +++  +   G L + L
Sbjct: 99  INIVNLLGACTVGGPTLVITEYCCYGDLLNFL 130

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 6/115 (5%)

Query: 119 LIGQGAFGPVYKAQMSTGE----TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +IG G FG V   ++         VA+K L A  +++  ++F +E  ++G+  H N+++L
Sbjct: 11  VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL 70

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G   +    M+V  +M  GSL + L  ++ G  T    V +   +A G++YL D
Sbjct: 71  EGVVTKSKPVMIVTEYMENGSLDAFL-RKHDGQFTVIQLVGMLRGIASGMKYLSD 124

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKAQ   TG   A KV+ T S++  +++  E+ +L    H N+V L+    
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +    ++  F + G++ + +  E   PLT      +       L YLH+    H
Sbjct: 73  YENNLWILIEFCAGGAVDAVML-ELERPLTEPQIRVVCKQTLEALNYLHENKIIH 126

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
           IG G+FG VY A  S T E VAVK ++   KQ  +++Q    EV  L +L H N +   G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            C  K     + +    GS AS L + +  PL       I     +GL YLH     H
Sbjct: 89  -CYLKEHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 144

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.4 bits (106), Expect = 2e-05
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 17/69 (24%)

Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGR 164
                IG GA+G V  A    TG  VA+K +          F           E+ LL  
Sbjct: 3   ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKI-------SNVFDDLIDAKRILREIKLLRH 55

Query: 165 LHHRNLVNL 173
           L H N++ L
Sbjct: 56  LRHENIIGL 64

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K   L T+++        E+ LL  L+H N+V L+  
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67

Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 68  IHTENKLYLVFEFLHQ 83

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLV 171
           FT L  IG+G+FG VYK     T E VA+K++  +  + E E  Q E+ +L +     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
              G   +  +  ++  ++  GS    L     GPL       I  ++ +GL+YLH    
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK 122

Query: 232 CH 233
            H
Sbjct: 123 IH 124

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 120 IGQGAFGPVYKAQMSTGETVA-VKVLATDSKQGEKEFQTEVMLLGR----LHHRNLVNLV 174
           IG G FG V  +++ T   VA V V    +    KE Q E +  G     L H N++  +
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKE-QNEFLQQGDPYRILQHPNILQCL 61

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLH 227
           G C E   ++LV+ +   G L S+L     +       L   +A ++A G+ ++H
Sbjct: 62  GQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH 116

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLVG 175
           IG+G+FG V K +  S G+ +  K +       EKE Q   +EV +L  L H N+V    
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEIDY-GNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66

Query: 176 YCAEKGQHMLVYVFM---SKGSLAS 197
              ++     +Y+ M     G LA 
Sbjct: 67  RIIDRSNQ-TLYIVMEYCEGGDLAQ 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE---FQT 157
           +P  + K ++K        +G G FG V+    +    VA+K L    KQG      F  
Sbjct: 3   VPRETLKLVKK--------LGAGQFGEVWMGYYNGHTKVAIKSL----KQGSMSPEAFLA 50

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           E  L+ +L H  LV L     ++  + ++  +M  GSL   L       LT N  + +A 
Sbjct: 51  EANLMKQLQHPRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPEGIKLTINKLIDMAA 109

Query: 218 DVARGLEYL 226
            +A G+ ++
Sbjct: 110 QIAEGMAFI 118

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 26/133 (19%)

Query: 120 IGQGAFGPVYKAQ---------MSTGE------TVAVKVLATD-SKQGEKEFQTEVMLLG 163
           +G+G FG V+  +             E       VAVK+L  D +K    +F  E+ ++ 
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72

Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------YDENYGPLTWNLRV 213
           RL + N++ L+G C       ++  +M  G L   L          +  N   ++    +
Sbjct: 73  RLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLL 132

Query: 214 HIALDVARGLEYL 226
           ++A+ +A G++YL
Sbjct: 133 YMAVQIASGMKYL 145

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVM 160
           IP  S K ++K        +G G FG V+    +    VAVK L   +   +  F  E  
Sbjct: 3   IPRESIKLVKK--------LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEAN 53

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           L+  L H  LV L     ++    ++  +M+KGSL   L  +  G +     +  +  +A
Sbjct: 54  LMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 113

Query: 221 RGLEYL 226
            G+ Y+
Sbjct: 114 EGMAYI 119

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G+G++G VYKA    TG+ VA+KV+  +     +E   E+ +L +     +V   G  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +     +V  +   GS+ S +       LT      I     +GLEYLH 
Sbjct: 68  FKNTDLWIVMEYCGAGSV-SDIMKITNKTLTEEEIAAILYQTLKGLEYLHS 117

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 118 TLIG----QGAFGPVYKAQMSTGETVAVKVLATDSKQGE--KEFQTEVMLLGRLHHRNLV 171
           TLIG          + K +  T   VAVK +  DS   E  K  Q E++   +L H N++
Sbjct: 4   TLIGKCFEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNIL 62

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNL-RVHIAL---DVARGLEYLH 227
             V       +  +V   M+ GS    L   ++      L  + IA    DV   L+Y+H
Sbjct: 63  PYVTSFIVDSELYVVSPLMAYGS-CEDLLKTHF---PEGLPELAIAFILKDVLNALDYIH 118

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 42.8 bits (100), Expect = 6e-05
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 19/134 (14%)

Query: 119 LIGQGAFGPVYKAQMSTG---ETVAVKVLAT-DSKQGEKEFQTEVMLLGRL-HHRNLVNL 173
           +IG+G FG V KA++         A+K +    SK   ++F  E+ +L +L HH N++NL
Sbjct: 2   VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHL-----------YDENYG---PLTWNLRVHIALDV 219
           +G C  +G   L   +   G+L   L           +         L+    +H A DV
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 220 ARGLEYLHDGVSCH 233
           ARG++YL      H
Sbjct: 122 ARGMDYLSQKQFIH 135

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G V+KA+   T E VA+K V   D  +G       E+ LL  L H+N+V L  Y
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--Y 65

Query: 177 CAEKGQHMLVYVF 189
                   L  VF
Sbjct: 66  DVLHSDKKLTLVF 78

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
           +G G  G V K + + TG  +A KV+   +K    K+   E+ ++       +V+  G  
Sbjct: 13  LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF 72

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             +    +   FM  GSL   +Y +  GP+   +   IA+ V  GL YL++
Sbjct: 73  LNENNICMCMEFMDCGSL-DRIYKK-GGPIPVEILGKIAVAVVEGLTYLYN 121

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 135 TGETVAVKVLATDSKQGEKE---FQTEVMLLGRLHHRNLVNLV--GYCAEKGQHMLVYVF 189
           TG  VA+K+L TD+ + E +   F+ E  L  RL+H N+V L+  G     G    V+ +
Sbjct: 2   TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEY 60

Query: 190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +   +L   L     G L       + L V   L   H+
Sbjct: 61  VPGRTLREVL--AADGALPAGETGRLMLQVLDALACAHN 97

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK--VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           IG+G++G V+K +   TG+ VA+K  V + D    +K    E+ +L +L H NLVNL+
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI 66

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +I +G  G  YK +        ++ +  +         +E+  +G+L H N+V L+G C 
Sbjct: 697 VISRGKKGASYKGKSIKNG---MQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCR 753

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            +    L++ ++   +L+  L +     L+W  R  IA+ +A+ L +LH
Sbjct: 754 SEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLH 797

Length = 968

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           +G+G FG V   Q+ +TG+  A K L       K GEK    E  +L +++   +VNL  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNL-A 59

Query: 176 YCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           Y  E   H+ LV   M+ G L  H+Y+     L     +H +  +  G+ +LH 
Sbjct: 60  YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS 113

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
           IG+G +G VYK +   TG+ VA+K +  +S++ E    T   E+ LL  L H N+V L  
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQD 66

Query: 176 YCAEKGQHMLVYVFMS 191
              ++ +  L++ F+S
Sbjct: 67  VLMQESRLYLIFEFLS 82

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQM---STGE-TVAVKVL-ATDSKQGEKEFQTEVMLL 162
           +L   +     ++G G FG + +  +   S  E  VA+  L A  S +  + F  E + L
Sbjct: 1   ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60

Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
           G+  H N+V L G        M+V  +MS G+L S L  ++ G L     + +   +A G
Sbjct: 61  GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFL-RKHEGQLVAGQLMGMLPGLASG 119

Query: 223 LEYL------HDGVSCH 233
           ++YL      H G++ H
Sbjct: 120 MKYLSEMGYVHKGLAAH 136

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 120 IGQGAFGPVYKAQ---MSTGET---VAVKVLATDSKQGEKE-FQTEVMLLGRLH-HRNLV 171
           +G GAFG V +A    +S  ++   VAVK+L + ++  EK+   +E+ ++  L  H N+V
Sbjct: 45  LGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIV 104

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLY 200
           NL+G C + G   ++  +   G L  +L+
Sbjct: 105 NLLGACTKGGPIYIITEYCRYGDLVDYLH 133

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG+G+FG V+K  + +     A+K   L+  +++  +E   E  +L +L    ++     
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYES 67

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             +KG+  +V  +   G L   L  +   PL  +      + +  GL +LH
Sbjct: 68  FLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH 118

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 12/107 (11%)

Query: 91  KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSK 149
           K   +VS  G P+  Y   +K        IGQGA G VY A  ++TG+ VA+K +    +
Sbjct: 7   KLRTIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAIDVATGQEVAIKQMNL-QQ 56

Query: 150 QGEKEF-QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
           Q +KE    E++++    H N+VN +       +  +V  +++ GSL
Sbjct: 57  QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           ++G+G FG V   Q+ +TG+  A K L       ++GE     E  +L +++ + +VNL 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLA 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
                K    LV   M+ G L  H+Y+           +  A ++  GLE LH
Sbjct: 67  YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH 119

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 10/111 (9%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYC 177
           IG GA G VYK     TG   A+KV+  + +    ++   E+ +L  ++H N+V      
Sbjct: 82  IGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF 141

Query: 178 AEKGQHMLVYVFMSKGSL-ASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
              G+  ++  FM  GSL  +H+ DE +          +A  +  G+ YLH
Sbjct: 142 DHNGEIQVLLEFMDGGSLEGTHIADEQF-------LADVARQILSGIAYLH 185

Length = 353

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 13/134 (9%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGE-KEFQTEV 159
           PE  +  L+K        IG+G+FG V+K     T + VA+K++  +  + E ++ Q E+
Sbjct: 2   PEELFTKLEK--------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI 53

Query: 160 MLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDV 219
            +L +     +    G   +  +  ++  ++  GS    L     GPL       I  ++
Sbjct: 54  TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREI 110

Query: 220 ARGLEYLHDGVSCH 233
            +GL+YLH     H
Sbjct: 111 LKGLDYLHSEKKIH 124

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 17/76 (22%)

Query: 104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQT---- 157
             Y+ L +        I +G +G VY+A+   TGE VA+K L  +    EKE F      
Sbjct: 5   DEYEKLNR--------IEEGTYGVVYRARDKKTGEIVALKKLKMEK---EKEGFPITSLR 53

Query: 158 EVMLLGRLHHRNLVNL 173
           E+ +L +L H N+V +
Sbjct: 54  EINILLKLQHPNIVTV 69

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHHRN 169
            F   +G G+FG V   +   +G+  A+K+L+       KQ  +    E  +L  + H  
Sbjct: 4   EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQSIRHPF 62

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLE 224
           LVNL G   +     LV  ++  G L SHL     + E         R + A  V   LE
Sbjct: 63  LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVA------RFYAA-QVVLALE 115

Query: 225 YLHD 228
           YLH 
Sbjct: 116 YLHS 119

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 120 IGQGAFGPVYKAQMSTG------ET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLV 171
           +GQG+FG VY+  ++ G      ET VA+K +   +   E+ EF  E  ++   +  ++V
Sbjct: 14  LGQGSFGMVYEG-IAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGL 223
            L+G  ++    +++   M++G L S+L         +    P +    + +A ++A G+
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 224 EYLH 227
            YL+
Sbjct: 133 AYLN 136

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRLH---HRNLVNL 173
           IG GA+G VYKA+   +G  VA+K +   + +      T  EV LL RL    H N+V L
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 174 VGYCA 178
           +  CA
Sbjct: 68  MDVCA 72

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           ++G+G FG V   Q+ +TG+  A K L       ++GE     E  +L +++ R +V+L 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLA 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
                K    LV   M+ G L  H+Y            V  A ++  GLE LH
Sbjct: 67  YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH 119

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM-----LLGRLHHRNLV 171
            +IG+G+FG V  A+  + G+  AVKVL   +   +KE Q  +M     LL  + H  LV
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKE-QKHIMAERNVLLKNVKHPFLV 59

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            L        +   V  +++ G L  HL  E   P     R + A ++A  L YLH
Sbjct: 60  GLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEP-RARFYAA-EIASALGYLH 113

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 12/63 (19%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL------ATDSKQGEKEFQTEVMLLGRL-HHRNLV 171
           +G+GA+G V+KA    T E VA+K +      ATD+   ++ F+ E+M L  L  H N+V
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDA---QRTFR-EIMFLQELGDHPNIV 70

Query: 172 NLV 174
            L+
Sbjct: 71  KLL 73

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 12/116 (10%)

Query: 119 LIGQGAFGPVYKAQMSTGET-VAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G G FG V+  +    E   A+KV+A       KQ E+    E  +L  + H  ++ L
Sbjct: 8   TVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQ-EQHVHNEKRVLKEVSHPFIIRL 66

Query: 174 VGYCAEKGQHML--VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             +  E  Q  L  +  ++  G L S+L   N G  + +  +  A ++   LEYLH
Sbjct: 67  --FWTEHDQRFLYMLMEYVPGGELFSYL--RNSGRFSNSTGLFYASEIVCALEYLH 118

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG GA+G V  A    +G+ VA+K +  A D     K    E+ +L    H N++ +   
Sbjct: 13  IGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDI 72

Query: 177 CAEKGQHML-VYVFMS-KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
               G     VYV M    S   H+   +  PLT     +    + RGL+Y+H
Sbjct: 73  LRPPGADFKDVYVVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIH 124

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 2/119 (1%)

Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +G G FG V+ A  +    VAVK +   S   E  F  E  ++  L H
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 60

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             LV L     ++  +++   FM+KGSL   L  +          +  +  +A G+ ++
Sbjct: 61  DKLVKLHAVVTKEPIYIITE-FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 118

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 119 LIGQGAFGPVYKAQ---MSTGE---TVAVKVLATDSKQGEKE-FQTEVMLLGRL-HHRNL 170
           ++G GAFG V +     +S  +    VAVK+L   ++  EK+   +E+ ++  L  H N+
Sbjct: 44  ILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI 103

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY 200
           VNL+G C + G   ++  +   G L ++L+
Sbjct: 104 VNLLGACTKSGPIYIITEYCFYGDLVNYLH 133

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 119 LIGQGAFGPVYKA-QMSTGET----VAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G GAFG VYK   +  GE     VA+KVL  + S +  KE   E  ++  +    +  
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           L+G C       LV   M  G L  ++  EN   +     ++  + +A+G+ YL +
Sbjct: 74  LLGICLTSTVQ-LVTQLMPYGCLLDYV-RENKDRIGSQDLLNWCVQIAKGMSYLEE 127

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 9/60 (15%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEF--QT---EVMLLGRLHHRNLVNL 173
           IG+G +G VYKA+   TGE VA+K +  ++   E E    T   E+ LL  L+H N+V L
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLET---EDEGVPSTAIREISLLKELNHPNIVRL 63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQT-EVMLLGRL---HHRNLV 171
             IG+GA+G VYKA+ ++TG  VA+K V    S++G       E+ LL +L    H N+V
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 172 NLVGYCA 178
            L+  C 
Sbjct: 65  RLLDVCH 71

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 22/122 (18%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           IG+G F  VYKA  +  G  VA+K +      D+K  +   + E+ LL +L H N++  +
Sbjct: 10  IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK-EIDLLKQLDHPNVIKYL 68

Query: 175 GYCAEKGQHMLVYVFMSKGSLA---------SHLYDENYGPLTWNLRVHIALDVARGLEY 225
               E  +  +V      G L+           L  E      W   V +       LE+
Sbjct: 69  ASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPE---RTIWKYFVQL----CSALEH 121

Query: 226 LH 227
           +H
Sbjct: 122 MH 123

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +GQG+FG VY+     +  GE    VAVK +   +   E+ EF  E  ++      ++V 
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHLY------DENYGPLTWNLR--VHIALDVARGL 223
           L+G  + KGQ  LV +  M+ G L S+L       + N G     L+  + +A ++A G+
Sbjct: 74  LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 224 EYLH 227
            YL+
Sbjct: 133 AYLN 136

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 27/138 (19%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGET-----------------VAVKVLATDS-KQGEKEFQT 157
           F   +G+G FG V+  +    E                  VAVK+L  D+ K    +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL---------YDENYGPLT 208
           E+ ++ RL   N++ L+  C       ++  +M  G L   L            +   ++
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128

Query: 209 WNLRVHIALDVARGLEYL 226
           ++  + +A  +A G++YL
Sbjct: 129 YSTLIFMATQIASGMKYL 146

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           ++G+G FG V   Q+ +TG+  A K L       ++GE     E  +L +++ R +V+L 
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
                K    LV   M+ G L  H+Y+           V  A ++  GLE LH
Sbjct: 67  YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH 119

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 119 LIGQGAFGPVYKA-QMSTGET----VAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
           ++G GAFG VYK   +  GE     VA+K L  AT S +  KE   E  ++  + + ++ 
Sbjct: 14  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVC 72

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYL 226
            L+G C       L+   M  G L  ++  + +N G    L W       + +A+G+ YL
Sbjct: 73  RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 125

Query: 227 HD 228
            +
Sbjct: 126 EE 127

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNL 173
           IG+G +G VYKA+   T ET+A+K +  + ++ E    T   E+ LL  + H N+V L
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLE-QEDEGVPSTAIREISLLKEMQHGNIVRL 66

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.95
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.94
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.94
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.94
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.93
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.93
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.92
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.9
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.88
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.88
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.88
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.87
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.86
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.86
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.86
KOG0198	313	consensus MEKK and related serine/threonine protei	99.86
KOG3653	534	consensus Transforming growth factor beta/activin	99.86
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.86
KOG0610	459	consensus Putative serine/threonine protein kinase	99.86
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.85
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.85
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.85
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.85
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.85
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.85
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.84
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.84
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.84
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.84
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.84
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.83
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.83
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.83
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.83
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.83
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.83
KOG0605	550	consensus NDR and related serine/threonine kinases	99.83
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.83
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.83
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.83
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.83
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.83
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.83
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.83
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.83
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.83
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.83
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.83
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.83
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.82
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.82
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.82
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.82
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.82
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.82
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.82
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.82
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.82
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.82
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.82
KOG0578	550	consensus p21-activated serine/threonine protein k	99.82
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.81
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.81
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.81
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.81
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.81
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.81
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.81
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.81
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.81
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.81
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.81
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.81
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.81
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.81
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.81
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.81
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.81
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.81
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.81
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.81
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.81
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.81
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.8
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.8
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.8
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.8
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.8
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.8
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.8
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.8
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.8
KOG0589	426	consensus Serine/threonine protein kinase [General	99.8
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.8
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.8
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.8
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.8
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.8
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.8
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.8
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.8
PTZ00267	478	NIMA-related protein kinase; Provisional	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.8
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.8
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.8
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.8
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.8
KOG0586	596	consensus Serine/threonine protein kinase [General	99.8
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.8
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.8
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.79
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.79
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.79
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.79
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.79
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.79
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.79
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.79
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.79
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.79
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.79
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.79
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.79
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.79
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.79
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.79
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.79
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.79
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.79
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.79
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.79
PHA02988	283	hypothetical protein; Provisional	99.79
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.79
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.79
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.79
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.79
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.79
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.79
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.79
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.79
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.78
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.78
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.78
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.78
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.78
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.78
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.78
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.78
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.78
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.78
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.78
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.78
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.78
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.78
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.78
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.78
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.78
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.78
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.78
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.78
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.78
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.78
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.78
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.78
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.78
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.78
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.78
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.78
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.78
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.78
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.78
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.78
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.77
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.77
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.77
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.77
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.77
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.77
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.77
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.77
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.77
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.77
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.77
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.77
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.77
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.77
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.77
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.77
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.77
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.77
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.77
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.77
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.77
PHA03212	391	serine/threonine kinase US3; Provisional	99.76
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.76
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.76
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.76
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.76
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.76
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.76
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.76
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.76
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.76
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.76
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.76
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.76
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.76
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.76
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.76
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.76
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.76
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.76
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.76
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.76
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.76
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.76
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.76
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.76
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.76
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.76
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.76
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.76
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.75
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.75
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.75
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.75
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.75
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.75
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.75
PHA03207	392	serine/threonine kinase US3; Provisional	99.75
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.75
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.75
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.74
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.74
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.74
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.74
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.74
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.74
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.74
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.74
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.74
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.74
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.74
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.74
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.74
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.74
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.74
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.74
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.74
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.74
PHA03209	357	serine/threonine kinase US3; Provisional	99.74
PHA03211	461	serine/threonine kinase US3; Provisional	99.73
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.73
PLN00009	294	cyclin-dependent kinase A; Provisional	99.73
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.73
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.73
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.73
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.73
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.73
PTZ00283	496	serine/threonine protein kinase; Provisional	99.73
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.73
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.73
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.73
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.73
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.73
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.72
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.72
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.72
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.72
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.72
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.72
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.72
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.72
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.72
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.72
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.72
PTZ00036	440	glycogen synthase kinase; Provisional	99.72
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.72
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.72
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.72
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.72
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.71
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.71
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.71
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.71
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.71
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.71
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.71
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.7
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.7
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.7
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.7
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.7
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.7
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.7
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.7
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.7
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.7
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.7
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.69
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.69
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.69
KOG0584	632	consensus Serine/threonine protein kinase [General	99.69
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.69
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.69
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.69
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.69
KOG1152	772	consensus Signal transduction serine/threonine kin	99.69
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.69
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.68
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.68
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.68
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.68
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.68
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.68
PHA03210	501	serine/threonine kinase US3; Provisional	99.68
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.67
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.67
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.67
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.67
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.67
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.67
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.67
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.67
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.67
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.67
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.67
PTZ00284	467	protein kinase; Provisional	99.67
PRK09188	365	serine/threonine protein kinase; Provisional	99.66
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.66
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.66
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.66
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.66
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.65
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.64
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.64
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.64
PRK10345	210	hypothetical protein; Provisional	99.64
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.63
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.63
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.62
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.62
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.62
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.62
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.61
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.61
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.61
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.6
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.6
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.6
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.59
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.59
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.59
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.56
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.56
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.55
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.55
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.54
PRK14879	211	serine/threonine protein kinase; Provisional	99.53
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.52
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.52
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.52
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.52
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.49
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.49
PHA02882	294	putative serine/threonine kinase; Provisional	99.48
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.47
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.47
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.47
smart00090	237	RIO RIO-like kinase.	99.47
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.46
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.46
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.46
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.43
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.39
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.39
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.39
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.36
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.34
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.29
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.29
PRK12274	218	serine/threonine protein kinase; Provisional	99.26
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.26
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.24
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.17
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.17
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.15
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.11
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.1
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.08
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.07
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.06
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.96
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.82
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.55
KOG3087	229	consensus Serine/threonine protein kinase [General	98.55
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.51
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.49
PLN00181	793	protein SPA1-RELATED; Provisional	98.49
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.38
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.3
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.29
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.17
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.15
KOG1243	690	consensus Protein kinase [General function predict	98.13
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.11
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.01
PRK09902	216	hypothetical protein; Provisional	97.92
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.87
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.57
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.55
PLN02876	822	acyl-CoA dehydrogenase	97.54
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	97.53
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.53
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.5
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.21
PRK10593	297	hypothetical protein; Provisional	97.2
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.19
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.99
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.97
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	96.96
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.96
PF01636	239	APH: Phosphotransferase enzyme family This family	96.94
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	96.93
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	96.85
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.54
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.46
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.45
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.42
PF15102	146	TMEM154: TMEM154 protein family	96.41
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.37
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	96.21
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	96.15
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	96.01
KOG1235	538	consensus Predicted unusual protein kinase [Genera	95.7
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.58
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	95.38
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.76
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.54
KOG2270	520	consensus Serine/threonine protein kinase involved	94.41
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	94.06
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	93.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	93.83
PF04689	69	S1FA: DNA binding protein S1FA; InterPro: IPR00677	93.42
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	93.34
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.26
PF05393	94	Hum_adeno_E3A: Human adenovirus early E3A glycopro	92.84
PF14851	153	FAM176: FAM176 family	92.42
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	92.38
PF07213	79	DAP10: DAP10 membrane protein; InterPro: IPR009861	92.35
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	92.04
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	91.24
PF15069	143	FAM163: FAM163 family	91.23
PF15050	133	SCIMP: SCIMP protein	91.16
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	91.15
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.06
KOG0576	829	consensus Mitogen-activated protein kinase kinase	91.01
PF10873	155	DUF2668: Protein of unknown function (DUF2668); In	90.96
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	90.6
PF14991	118	MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P	90.52
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	90.35
PHA03265	402	envelope glycoprotein D; Provisional	90.27
KOG2268	465	consensus Serine/threonine protein kinase [Signal	90.0
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	89.88
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	88.78
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	88.75
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	88.66
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	88.54
PF06365	202	CD34_antigen: CD34/Podocalyxin family; InterPro: I	88.18

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=9.4e-29  Score=204.36  Aligned_cols=131  Identities=27%  Similarity=0.461  Sum_probs=116.8

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...|.++....+.+.||+|.||+|.+++...+..||||.++.+ ....+.+|.+|+++|.+++||||+.++|+|..++++
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi  610 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL  610 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence            5678899999999999999999999999877799999999877 444568999999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+||+++|||.+|+.........-...+++|.||+.||+||.+.++|||+
T Consensus       611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd  662 (807)
T KOG1094|consen  611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRD  662 (807)
T ss_pred             HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhcc
Confidence            9999999999999999654333345556788999999999999999999996

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=5.5e-28  Score=207.52  Aligned_cols=133  Identities=32%  Similarity=0.530  Sum_probs=115.0

Q ss_pred             ccCHHHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceee
Q 026630          103 EYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVG  175 (235)
Q Consensus       103 ~~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~  175 (235)
                      .....++++....+.+.||+|+||+||+|+.      .+...||||.+++... +..++|.+|+++++.++|||||+++|
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlG  556 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLG  556 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence            3444566777777788899999999999964      2345799999987744 47889999999999999999999999


Q ss_pred             EEEeCCEEEEEEEcccCCChhhhhhcC------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          176 YCAEKGQHMLVYVFMSKGSLASHLYDE------------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       176 ~~~~~~~~~lv~e~~~~g~L~~~l~~~------------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|..++++++|+|||..|||.+||+..            ...+++..+.+.+|.|||.||+||.++++||||
T Consensus       557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRD  628 (774)
T KOG1026|consen  557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRD  628 (774)
T ss_pred             EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence            999999999999999999999999631            123488899999999999999999999999997

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.94  E-value=6.2e-27  Score=186.35  Aligned_cols=119  Identities=27%  Similarity=0.423  Sum_probs=106.9

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.||.|+|+.||+|.. .++..||||.+...  ..+..+.+..|+++++.++|||||.+++++++++..++|||||+
T Consensus        13 ~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~   92 (429)
T KOG0595|consen   13 ELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCN   92 (429)
T ss_pred             eehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCC
Confidence            3445699999999999964 46789999999766  55666678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||.+|++..  +.+++..+..++.|+|.||++||+++||||+
T Consensus        93 gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRD  134 (429)
T KOG0595|consen   93 GGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRD  134 (429)
T ss_pred             CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999999543  5699999999999999999999999999997

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9e-26  Score=185.22  Aligned_cols=136  Identities=51%  Similarity=0.882  Sum_probs=120.3

Q ss_pred             CCCccCHHHHHHHHhhhh--hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEE
Q 026630          100 GIPEYSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC  177 (235)
Q Consensus       100 ~~~~~~~~~l~~~~~~~~--~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~  177 (235)
                      ....+.+.++..++.+|.  +.||+|+||.||+|.+.++..||||.+.........+|..|+.++.+++|||+|+++|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            456789999999999998  689999999999999988899999988655332145699999999999999999999999


Q ss_pred             EeCC-EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---ccccC
Q 026630          178 AEKG-QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV---SCHLF  235 (235)
Q Consensus       178 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~---ivHr~  235 (235)
                      .+.+ ..+||+||+++|+|.+.|+.....+++|..+++||.++|+||+|||...   ||||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrD  202 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRD  202 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCC
Confidence            9888 5999999999999999997654327899999999999999999999855   99996

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-26  Score=190.05  Aligned_cols=130  Identities=26%  Similarity=0.416  Sum_probs=117.7

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+++.+..+.+.+.||+|.||.||.|.++....||+|.+.... ...++|.+|+.+|++|+|+|||+++|+|..+++++
T Consensus       199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            44677788888889999999999999999777799999997652 33458999999999999999999999999988999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||||+.|+|.+||+......+...+.+.|+.|||+||+||+++++||||
T Consensus       278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRD  328 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRD  328 (468)
T ss_pred             EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchh
Confidence            999999999999999875667799999999999999999999999999997

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.93  E-value=2.4e-26  Score=195.47  Aligned_cols=128  Identities=27%  Similarity=0.486  Sum_probs=114.1

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG  181 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  181 (235)
                      +|+......+.++||.|.||+|++|.++    ....||||.++.. ..+.+.+|+.|..+|.+++||||+++.|+.+...
T Consensus       624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK  703 (996)
T ss_pred             hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc
Confidence            3455555556689999999999999763    3468999999877 6777889999999999999999999999999999


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.++|.|||++|+|..||+.+. +.|++.+.+.|.+.|+.||.||.++++|||+
T Consensus       704 PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRD  756 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRD  756 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhh
Confidence            9999999999999999997655 5599999999999999999999999999996

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.93  E-value=4.5e-25  Score=180.25  Aligned_cols=124  Identities=35%  Similarity=0.573  Sum_probs=107.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-EEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-QHMLVYV  188 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e  188 (235)
                      ....+.+.+|.|+||.||+|.+.....||+|.+...+  ....++|.+|+.+|.+++|||||+++|.|.... ..++|||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            3334556699999999999999444449999997642  233668999999999999999999999998887 7999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-ccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV-SCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-ivHr~  235 (235)
                      |+++|+|.++++......+++..++.+|.|||+||.|||+++ ||||+
T Consensus       121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrD  168 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRD  168 (362)
T ss_pred             eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecc
Confidence            999999999997644577999999999999999999999999 99996

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.6e-25  Score=184.75  Aligned_cols=128  Identities=32%  Similarity=0.463  Sum_probs=111.2

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCC--C---CEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMST--G---ETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~  178 (235)
                      +++...+..+.++||+|+||.||+|.+..  +   ..||+|.....   ......+|++|+++|+.++|||||+++|++.
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV  231 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            56666666777899999999999997533  2   23899998742   4566778999999999999999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+++++||+|+||+|.++|+... ..++..+.+.++.+.|+||+|||++++||||
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRD  287 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRD  287 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchh
Confidence            9999999999999999999996543 3589999999999999999999999999996

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=2.1e-24  Score=179.49  Aligned_cols=122  Identities=26%  Similarity=0.371  Sum_probs=111.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+|...+.||+|+|+.+|.++. ..|..+|+|.+++.   .....+...+|+++.+.|+|||||+++++|++.++.|+++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5666778999999999999976 78999999999864   4455667899999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|++|+|..++.  +++++++.++..+.+||+.||.|||+++||||+
T Consensus        98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRD  143 (592)
T KOG0575|consen   98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD  143 (592)
T ss_pred             EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            9999999999995  457899999999999999999999999999997

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.7e-23  Score=166.98  Aligned_cols=123  Identities=23%  Similarity=0.355  Sum_probs=104.9

Q ss_pred             HHHhhhhhccCCCCceeEEEE-EeCCCCEEEEEEeecCCh-------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          111 KATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSK-------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~-~~~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ...+.+.+.||+|+||.|-++ +..++..||||.+.+...       .......+|+++|++++|||||++.+++...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            334455688999999999999 567899999999975411       112235799999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .|+||||+++|+|.+++..+  +.+.+.....+++|++.|+.|||++||+||+
T Consensus       251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRD  301 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRD  301 (475)
T ss_pred             eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCccccc
Confidence            99999999999999999654  4577777889999999999999999999996

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.90  E-value=2.3e-23  Score=173.25  Aligned_cols=127  Identities=27%  Similarity=0.448  Sum_probs=113.7

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      .+++++.....+.+.||+|.||+||+|.|-  ..||||.+..+  .+...++|.+|+.++++-+|.||+-|.|+|...+.
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            567788888888899999999999999983  45999999866  45567899999999999999999999999988766


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       .+|..+|++-+|..+++..+ ..|+....+.||.||++||.|||.++||||+
T Consensus       463 -AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrD  513 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRD  513 (678)
T ss_pred             -eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence             89999999999999998754 5689999999999999999999999999996

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=9.5e-23  Score=166.40  Aligned_cols=123  Identities=28%  Similarity=0.360  Sum_probs=105.8

Q ss_pred             HHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHML  185 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  185 (235)
                      ...|+..++||+|.||.||++. ..+|..||+|.++.+.  .....-..+||.+|++|+||||+++.+.....  ...||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            3444556789999999999994 5689999999998663  34445568999999999999999999998765  78999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|||++ ||..++.. ....|+..++..|++|++.||+|||++||+||+
T Consensus       196 VFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRD  243 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRD  243 (560)
T ss_pred             EEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeecc
Confidence            9999988 99998844 345699999999999999999999999999997

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.6e-23  Score=182.52  Aligned_cols=128  Identities=32%  Similarity=0.559  Sum_probs=111.2

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC--C----CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST--G----ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~--~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++.....++.+.||+|.||.||.|.+.+  +    ..||+|.+++. +.....+|++|..+|+.++|||||+++|+|.+.
T Consensus       688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS  767 (1025)
T ss_pred             cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence            3445555677889999999999997632  2    35999999876 666778999999999999999999999999999


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN-----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+.++++|||++|||..||++.+     ...++..+.+.++.|||+||.||+++++|||+
T Consensus       768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRD  827 (1025)
T KOG1095|consen  768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRD  827 (1025)
T ss_pred             CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcc
Confidence            99999999999999999997652     23578899999999999999999999999996

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=2.5e-22  Score=161.78  Aligned_cols=129  Identities=27%  Similarity=0.398  Sum_probs=101.3

Q ss_pred             CCCCccCHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHH--ccCCCCCccceeeE
Q 026630           99 SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLL--GRLHHRNLVNLVGY  176 (235)
Q Consensus        99 ~~~~~~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l--~~l~h~niv~~~~~  176 (235)
                      .++|.+- +.-...+..+.+.||+|.||+||+|.| .|..||||.+...++.   .+.+|.++.  ..++|+||+.|++.
T Consensus       199 SGlplLV-QRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaa  273 (513)
T KOG2052|consen  199 SGLPLLV-QRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAA  273 (513)
T ss_pred             CCchhHh-HHhhhheeEEEEEecCccccceeeccc-cCCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhc
Confidence            4444443 344445667789999999999999999 7999999999755433   455565554  45699999999988


Q ss_pred             EEeC----CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-----cCC---ccccC
Q 026630          177 CAEK----GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-----DGV---SCHLF  235 (235)
Q Consensus       177 ~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH-----~~~---ivHr~  235 (235)
                      -..+    ..++||.+|.+.|+|.+||.+   ..++....+.++..+|.||+|||     .+|   |.||+
T Consensus       274 D~~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRD  341 (513)
T KOG2052|consen  274 DNKDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRD  341 (513)
T ss_pred             cccCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccc
Confidence            6433    368999999999999999943   56899999999999999999999     233   88886

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=1.1e-22  Score=162.54  Aligned_cols=127  Identities=22%  Similarity=0.347  Sum_probs=112.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ..-.+.+|.+.+.||+|.||.|-++. ...|+.||||.++++   +..+.-.+.+|+++|..++||||++++.+|+..+.
T Consensus        48 khnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK  127 (668)
T KOG0611|consen   48 KHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK  127 (668)
T ss_pred             ccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence            34456778889999999999999994 467999999999876   34444567899999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+||||..+|+|.+|+.  ..+.+++.++..+++||..|+.|+|.++++||+
T Consensus       128 IvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRD  178 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRD  178 (668)
T ss_pred             EEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecc
Confidence            999999999999999994  346799999999999999999999999999996

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=4.4e-23  Score=176.76  Aligned_cols=117  Identities=29%  Similarity=0.436  Sum_probs=102.9

Q ss_pred             hhccCCCCceeEEEEEe-CCC----CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          117 TTLIGQGAFGPVYKAQM-STG----ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .++||+|+||.||+|.| ..+    .+||+|.+... ..+...+++.|+..|.+++|||+++++|+|.... +.||++|+
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            57899999999999965 233    48999999766 5556778999999999999999999999997765 77999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.|.|.+|++.. +.++...+.+.++.|||+||.|||.+++|||+
T Consensus       780 P~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrd  823 (1177)
T KOG1025|consen  780 PLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRD  823 (1177)
T ss_pred             ccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence            999999999764 46788899999999999999999999999995

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.87  E-value=6.8e-22  Score=156.06  Aligned_cols=123  Identities=24%  Similarity=0.363  Sum_probs=108.7

Q ss_pred             HHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ...+.+.++||+|+||+|+.++ .++++.+|+|.+++.   .....+...+|..++..++||.||.+.-.|.+.+.+|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            3445677899999999999995 457889999999765   334556788999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+.||+|...|.++  +.|++..+..++.+|+.||.|||++||||||
T Consensus       104 ld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRD  150 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRD  150 (357)
T ss_pred             EeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999999999999544  5699999999999999999999999999997

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.1e-22  Score=168.47  Aligned_cols=131  Identities=25%  Similarity=0.397  Sum_probs=117.5

Q ss_pred             cCHHHHHHHHhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       104 ~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ..-+++.+.++....+||-|.||.||.|.|+. ...||||.++.+ ....++|+.|..+|+.++|||+|+++|+|..+.+
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP  337 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP  337 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence            34577888887778899999999999998754 568999999755 3456799999999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .|+|.|||.+|+|.+||++.++..++.--.+.||.||+.||+||..+++|||+
T Consensus       338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRD  390 (1157)
T KOG4278|consen  338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRD  390 (1157)
T ss_pred             eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            99999999999999999987777788888899999999999999999999996

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4e-22  Score=148.99  Aligned_cols=124  Identities=24%  Similarity=0.333  Sum_probs=109.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .++++++.||+|.||.||.+.. ..+-.||+|.+.+.   ...-...+.+|+++-..++||||++++++|.+....|+++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            3446788999999999999964 45678999998754   2233456889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||.+.|+|...|++.....++......+..|+|.||.|+|.++||||+
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRd  149 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRD  149 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCC
Confidence            999999999999877777899999999999999999999999999996

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.86  E-value=2.3e-20  Score=147.51  Aligned_cols=119  Identities=28%  Similarity=0.364  Sum_probs=105.4

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-EEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-QHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~  191 (235)
                      +..+.||+|..|.|+++.. .++..+|+|.+... +....+.+.+|+++++..+||+||.++|.|.... ..+++||||+
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            3456799999999999954 46889999999655 5666778999999999999999999999999888 5999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +|+|.+++...  +.+++...-.++.++++||.|||+ ++||||+
T Consensus       162 gGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRD  204 (364)
T KOG0581|consen  162 GGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRD  204 (364)
T ss_pred             CCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeecc
Confidence            99999999543  568999999999999999999995 9999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.86  E-value=2.6e-21  Score=159.29  Aligned_cols=122  Identities=25%  Similarity=0.352  Sum_probs=106.2

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.|++.||.|+|++|++++ ...+..+|||++.+.   .....+-...|-.+|..| +||.|++++-.|.|+..+|+|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            455678999999999999995 457889999998654   223334456788888888 899999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++.  +.+.|++.....++.||+.||+|||++|||||+
T Consensus       153 Le~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRD  199 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRD  199 (604)
T ss_pred             EEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            99999999999994  457799999999999999999999999999997

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=4.3e-21  Score=152.90  Aligned_cols=121  Identities=27%  Similarity=0.403  Sum_probs=104.0

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--EEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--QHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~  190 (235)
                      +...+.||+|+||.||++... +|...|||.....+....+.+.+|+.+|.+++|||||+++|.....+  .+++.|||+
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            455688999999999999753 48899999987653333667899999999999999999999855444  688999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++..... .+++..+..+++||++||+|||++|+|||+
T Consensus        99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~D  142 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCD  142 (313)
T ss_pred             CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            99999999965433 699999999999999999999999999986

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=5.5e-21  Score=155.08  Aligned_cols=114  Identities=34%  Similarity=0.525  Sum_probs=94.8

Q ss_pred             hhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHH--ccCCCCCccceeeEEEeCC----EEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLL--GRLHHRNLVNLVGYCAEKG----QHMLVYV  188 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l--~~l~h~niv~~~~~~~~~~----~~~lv~e  188 (235)
                      ++.+++|+|.||.||+|.+ +++.||||.++..+   .+.|..|-.+.  -.+.|+||++|++.-....    .++||+|
T Consensus       213 ~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             hhHHHhhcCccceeehhhc-cCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            3457799999999999998 67999999997443   34666666654  4569999999999875544    7899999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc---------CCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD---------GVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~---------~~ivHr~  235 (235)
                      |.++|+|.+||..   ...+|....+++..+++||+|||+         ..|+||+
T Consensus       289 fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRD  341 (534)
T KOG3653|consen  289 FHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRD  341 (534)
T ss_pred             eccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccc
Confidence            9999999999954   348999999999999999999994         4589986

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.86  E-value=4.1e-21  Score=152.45  Aligned_cols=124  Identities=26%  Similarity=0.420  Sum_probs=106.9

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ...+.+.+.||+|+||.||++.+.    .+..+++|.++.. .......|.+|+..+..++||||+++.+.+...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            445667789999999999999642    3568999998765 33445678999999999999999999999999899999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+++|+|.+++... ...+++.+++.++.||+.||+|||+++++||+
T Consensus        84 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~d  132 (266)
T cd05064          84 VTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKG  132 (266)
T ss_pred             EEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            99999999999999653 24689999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=2.4e-20  Score=149.18  Aligned_cols=128  Identities=24%  Similarity=0.207  Sum_probs=111.8

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      .+....+++.+.||+|.-|.||+++... +...|+|.+.+.   ..........|-++|+.++||.++++++.++.+...
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            3444455667889999999999998743 488999999765   233344667888899999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |++||||+||||...++.+....|++..+..|+.+++.||+|||-+|||.|+
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRD  204 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRD  204 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeecc
Confidence            9999999999999999888888899999999999999999999999999996

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.85  E-value=2.4e-20  Score=172.20  Aligned_cols=113  Identities=26%  Similarity=0.451  Sum_probs=97.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +...+.||+|+||.||+|.. .++..||+|.+.......    ..|+..+++++||||++++++|.+.+..++||||+++
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~  767 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEG  767 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCC
Confidence            34457899999999999975 578899999986443221    3457889999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH---DGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH---~~~ivHr~  235 (235)
                      |+|.++++     .++|..+..++.||+.||+|||   +.+|+||+
T Consensus       768 g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~d  808 (968)
T PLN00113        768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGN  808 (968)
T ss_pred             CcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCC
Confidence            99999993     3789999999999999999999   77999996

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.85  E-value=3.6e-21  Score=152.32  Aligned_cols=120  Identities=38%  Similarity=0.625  Sum_probs=103.1

Q ss_pred             hhhccCCCCceeEEEEEeC-----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          116 FTTLIGQGAFGPVYKAQMS-----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.||.|.||.||+|.+.     .+..|+||.+... .....+.|.+|+..+.+++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4577999999999999875     2468999999654 344567899999999999999999999999988889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.++|.......+++.++..++.||+.||+|||+++++|+.
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~  128 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGN  128 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999776456799999999999999999999999999984

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.3e-21  Score=158.89  Aligned_cols=124  Identities=25%  Similarity=0.288  Sum_probs=106.3

Q ss_pred             HHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChh-cHHHHHHHHHHHccCC-CCCccceeeEEEeCC-EEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ-GEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKG-QHML  185 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~l  185 (235)
                      ...+|.+.+.||.|.||.||++. ...+..||||..+..-.. +.-.=++|+..+++++ ||||+++.+++.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            34567778899999999999995 457888999998654222 1122379999999998 999999999998887 9999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||||+. +|.+++.+. ...|++..+..|+.||++||+|+|.+|+.||+
T Consensus        88 VfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRD  135 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRD  135 (538)
T ss_pred             eHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            9999977 999999765 67899999999999999999999999999997

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.85  E-value=1.7e-20  Score=151.78  Aligned_cols=126  Identities=28%  Similarity=0.508  Sum_probs=105.5

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC-----------------CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCcc
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST-----------------GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLV  171 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv  171 (235)
                      +..++.+.+.||+|+||.||++.+.+                 +..+|+|.+... ......+|.+|+.++.+++||||+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            44566778899999999999996422                 236999998765 334456799999999999999999


Q ss_pred             ceeeEEEeCCEEEEEEEcccCCChhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCcccc
Q 026630          172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN-----------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHL  234 (235)
Q Consensus       172 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr  234 (235)
                      ++++.+.+.+..+++|||+++|+|.+++....                 ...+++.....++.||+.||+|||+++|+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~  162 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR  162 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999999899999999999999999885321                 1246778899999999999999999999999


Q ss_pred             C
Q 026630          235 F  235 (235)
Q Consensus       235 ~  235 (235)
                      +
T Consensus       163 d  163 (304)
T cd05096         163 D  163 (304)
T ss_pred             C
Confidence            6

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.85  E-value=6.6e-21  Score=156.39  Aligned_cols=128  Identities=31%  Similarity=0.513  Sum_probs=105.0

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ++...++.+.+.||+|+||.||++..      ..+..||+|.+... .......+.+|+.++..+ +||||+++++.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            45556778889999999999999963      23467999998754 233456789999999999 89999999998865


Q ss_pred             C-CEEEEEEEcccCCChhhhhhcCC-------------------------------------------------------
Q 026630          180 K-GQHMLVYVFMSKGSLASHLYDEN-------------------------------------------------------  203 (235)
Q Consensus       180 ~-~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------  203 (235)
                      . +..+++|||+++|+|.+++....                                                       
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (338)
T cd05102          83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE  162 (338)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence            4 46889999999999999985421                                                       


Q ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          204 -----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       204 -----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                           ..++++.....++.||+.||+|||+++|+||+
T Consensus       163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  199 (338)
T cd05102         163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRD  199 (338)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
Confidence                 13477888899999999999999999999996

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.85  E-value=1.2e-20  Score=157.04  Aligned_cols=130  Identities=26%  Similarity=0.397  Sum_probs=108.8

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC  177 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~  177 (235)
                      ..+++..++.+.+.||+|+||.||++..      ..+..||+|.+... .....+.+.+|+.++..+ +||||+++++.+
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            3456667788899999999999999963      23558999998654 334456788999999999 899999999999


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhcCC------------------------------------------------------
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYDEN------------------------------------------------------  203 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~~~------------------------------------------------------  203 (235)
                      ...+..+++|||+++|+|.+++....                                                      
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            99999999999999999999985421                                                      


Q ss_pred             -------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          204 -------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       204 -------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                         ...+++.....++.||+.||+|||+++++||+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~D  239 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRD  239 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence                               12467888999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.84  E-value=7.2e-21  Score=159.22  Aligned_cols=126  Identities=26%  Similarity=0.450  Sum_probs=109.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC---C--CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST---G--ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG  181 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  181 (235)
                      ++.++...+.++||.|.||.||+|.+.+   |  ..||||..+.+ .....+.|+.|..+|++++||||++++|.|... 
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-  463 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-  463 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence            5666777788899999999999997532   2  36889988765 555677899999999999999999999999875 


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.++|||.++.|.|..||..+ +..++......++.||+.+|+|||++++|||+
T Consensus       464 P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRD  516 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKRFVHRD  516 (974)
T ss_pred             ceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhchhhhh
Confidence            678999999999999999654 45688889999999999999999999999996

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.84  E-value=2.5e-20  Score=147.29  Aligned_cols=126  Identities=29%  Similarity=0.443  Sum_probs=112.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ....|.+.+.||.|+||.||++....+..+++|.+..........+..|+.+++.++||||+++++.+...+..+++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34567778999999999999998777899999999766655566889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++.+.....+++.....++.||+.||.|||+++++||+
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~d  129 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRD  129 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            9999999999765556689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=4.1e-21  Score=162.40  Aligned_cols=125  Identities=26%  Similarity=0.387  Sum_probs=109.4

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC--C--CEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST--G--ETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ....+.+.+.||+|+||.|++|.|..  |  ..||||+++.+... ...+|++|+.+|.+|+|+|+++++|+..+ ....
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m  186 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM  186 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence            34444567889999999999998743  2  47999999877444 67799999999999999999999999988 6788


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|+++.|+|.+.|+......|-......|+.|||.||.||.++++|||+
T Consensus       187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRD  237 (1039)
T KOG0199|consen  187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRD  237 (1039)
T ss_pred             HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            999999999999999875566788888899999999999999999999996

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.6e-20  Score=153.41  Aligned_cols=122  Identities=24%  Similarity=0.345  Sum_probs=105.0

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC----Ch-hcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD----SK-QGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~  184 (235)
                      ..+.+.+.||+|.||.|+.+. ..++..||+|.+...    .. ...+...+|+.+++.++ ||||++++.++......+
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~   96 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY   96 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence            345667889999999999995 456799999976543    11 22345568999999998 999999999999998999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+.+|+|.+++.+  .+++.+.++..++.|++.|++|||++||+||+
T Consensus        97 ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRD  145 (370)
T KOG0583|consen   97 IVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRD  145 (370)
T ss_pred             EEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCC
Confidence            99999999999999965  46789999999999999999999999999997

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=1.3e-20  Score=144.92  Aligned_cols=119  Identities=24%  Similarity=0.281  Sum_probs=106.0

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +..+.||.|+||.|.+.+. .++..+|+|.+.+.   ..++.+...+|..+++.+.||.++++++.+.+...+++||||+
T Consensus        47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv  126 (355)
T KOG0616|consen   47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYV  126 (355)
T ss_pred             hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEecc
Confidence            4467899999999999964 46789999999765   3345566789999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.|..+|+..  +.|+...+..+|.||+.||+|||+++|++|+
T Consensus       127 ~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRD  169 (355)
T KOG0616|consen  127 PGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRD  169 (355)
T ss_pred             CCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeecc
Confidence            999999999654  5699999999999999999999999999996

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.84  E-value=2.5e-20  Score=141.36  Aligned_cols=120  Identities=28%  Similarity=0.360  Sum_probs=104.4

Q ss_pred             hhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChh--cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ--GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.-.+.+|+|.||.||+|. ..+|+.||||.++.....  -.....+|+..++.++|+||+.++++|.....+.+|+||+
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm   83 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM   83 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence            4445779999999999995 568999999999765322  1235689999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +. ||...+++. ...++..+...++.++++|++|||++.|+||+
T Consensus        84 ~t-dLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRD  126 (318)
T KOG0659|consen   84 PT-DLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRD  126 (318)
T ss_pred             cc-cHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            77 999999654 46799999999999999999999999999996

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=3e-20  Score=154.74  Aligned_cols=120  Identities=22%  Similarity=0.228  Sum_probs=104.1

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+...   .....+.+.+|+.+++.++||||+++++.+.+.+..++||||
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~   82 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEF   82 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeC
Confidence            45568899999999999964 46789999998653   223345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        83 ~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrD  126 (377)
T cd05629          83 LPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRD  126 (377)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999999998543  5688889999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.83  E-value=8.7e-21  Score=157.15  Aligned_cols=120  Identities=28%  Similarity=0.387  Sum_probs=106.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +|.+.+.||+|+||.||+|+. .+...||+|.+.+.  ..++.+.+.+|+++++.++||||+.++++|+....+++|.||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            356678899999999999953 46788999999765  445567789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+ +|+.+|.+.  +.+++..+..++.|++.||.|||+++|.||+
T Consensus        83 a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd  125 (808)
T KOG0597|consen   83 AVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRD  125 (808)
T ss_pred             hhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            977 999999544  5699999999999999999999999999996

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.83  E-value=4.3e-20  Score=147.33  Aligned_cols=116  Identities=24%  Similarity=0.389  Sum_probs=98.7

Q ss_pred             ccCCCCceeEEEEEeC-------------------------CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccce
Q 026630          119 LIGQGAFGPVYKAQMS-------------------------TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL  173 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~  173 (235)
                      .||+|+||.||+|...                         ....|++|.+..........|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5899999999998631                         113588888865544445678889999999999999999


Q ss_pred             eeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       174 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++.+....++||||+++|+|..++... ...+++..++.++.||+.||+|||+++|+||+
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d  142 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGN  142 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence            99999999999999999999999988543 34688999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.6e-20  Score=154.35  Aligned_cols=120  Identities=20%  Similarity=0.230  Sum_probs=104.7

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.++..++||||+++++.+.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEY   82 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECC
Confidence            45568899999999999965 46789999999753   223345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        83 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~D  126 (364)
T cd05599          83 LPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRD  126 (364)
T ss_pred             CCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            9999999998543  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.83  E-value=3.2e-20  Score=155.39  Aligned_cols=96  Identities=25%  Similarity=0.421  Sum_probs=79.2

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCC-CCCccceeeEE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYC  177 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~  177 (235)
                      -.+.++.++.+.+.||+|+||.||+|...      .+..||+|.+... .....+.+.+|+.+++.++ ||||+++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            34555667778899999999999999642      1246999999754 3344567999999999995 99999999999


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhc
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYD  201 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~  201 (235)
                      ...+..+++|||+++|+|.+++..
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHH
Confidence            999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.83  E-value=3.6e-20  Score=154.46  Aligned_cols=120  Identities=20%  Similarity=0.172  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++.. .++..+|+|.+...   .......+..|+.++..++||||+++++.+.+.+..+++|||
T Consensus         3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~   82 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (381)
T ss_pred             ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence            34567899999999999964 56789999999754   233445788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        83 ~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrD  126 (381)
T cd05626          83 IPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRD  126 (381)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            9999999998543  4588888999999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.83  E-value=4e-20  Score=151.87  Aligned_cols=125  Identities=22%  Similarity=0.257  Sum_probs=106.5

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC--CCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST--GETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      +....+.+.+.||+|+||.||++....  +..+|+|.+...   .......+.+|+.++..++||||+++++.+.+.+..
T Consensus        27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~  106 (340)
T PTZ00426         27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL  106 (340)
T ss_pred             CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence            344456778899999999999997533  358999998643   223445688999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++|+|.+++...  ..+++..+..++.|++.||+|||+++|+||+
T Consensus       107 ~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  156 (340)
T PTZ00426        107 YLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRD  156 (340)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence            9999999999999999543  4588999999999999999999999999996

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.83  E-value=3.2e-20  Score=152.76  Aligned_cols=119  Identities=24%  Similarity=0.290  Sum_probs=106.0

Q ss_pred             hhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+.++||+|+||.||+++ ..+|..+|+|.+++.   ...+.+....|-.+|...++|+||+++..|.+.+.+||||||+
T Consensus       144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEyl  223 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYL  223 (550)
T ss_pred             hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEec
Confidence            445789999999999995 457899999999876   3344556788889999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+..+|.  +...|++..+..++.+++.|++-||+.|+|||+
T Consensus       224 PGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRD  266 (550)
T KOG0605|consen  224 PGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRD  266 (550)
T ss_pred             CCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            9999999994  446799999999999999999999999999996

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.83  E-value=6.2e-20  Score=149.76  Aligned_cols=116  Identities=24%  Similarity=0.281  Sum_probs=101.4

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+++.++||||+++.+.+...+..+++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999964 46889999999754   2233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD  120 (323)
T cd05571          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRD  120 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            999998543  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.83  E-value=6.2e-21  Score=161.40  Aligned_cols=119  Identities=29%  Similarity=0.381  Sum_probs=103.9

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEEEEEEE
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQHMLVYV  188 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e  188 (235)
                      .+.||+|+||.||+|+ ...|+.||||.++.. .....+...+|+++|++++|||||++++.-.+.      ....++||
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE   97 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME   97 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence            3569999999999996 568999999999865 455667789999999999999999999986543      35679999


Q ss_pred             cccCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||++|||+..|.+. +...+++.+.+.+..+++.||.|||++|||||+
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRD  145 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRD  145 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceecc
Confidence            99999999999763 356699999999999999999999999999997

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.83  E-value=4e-20  Score=153.23  Aligned_cols=120  Identities=22%  Similarity=0.237  Sum_probs=104.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +++.+.||+|+||.||++.. .++..+|+|.+....   ......+..|+.++..++||||+++++.+.+....++||||
T Consensus         3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~   82 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEF   82 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcC
Confidence            45567899999999999964 467899999997542   23345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        83 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrD  126 (363)
T cd05628          83 LPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRD  126 (363)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence            9999999999543  5689999999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.83  E-value=6.9e-20  Score=149.51  Aligned_cols=116  Identities=26%  Similarity=0.292  Sum_probs=101.2

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+++.++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3589999999999964 46889999999754   2334456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|..++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  120 (323)
T cd05595          81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRD  120 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            999888543  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.83  E-value=5.3e-20  Score=153.18  Aligned_cols=120  Identities=21%  Similarity=0.214  Sum_probs=104.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.++..++||||+++++.+.+.+..+++|||
T Consensus         3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence            45668899999999999964 467899999986432   23345678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..++...+..++.||+.||+|||+++|+||+
T Consensus        83 ~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrD  126 (376)
T cd05598          83 IPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRD  126 (376)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            9999999999543  4578888899999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.83  E-value=5.3e-20  Score=150.54  Aligned_cols=122  Identities=23%  Similarity=0.323  Sum_probs=105.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+.+.+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|+.++..++||||+++++.+.+.+..+++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            4456778899999999999975 35789999998754   2233456889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  143 (329)
T PTZ00263         98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRD  143 (329)
T ss_pred             cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            999999999999543  4578888999999999999999999999996

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=3.1e-20  Score=149.34  Aligned_cols=120  Identities=21%  Similarity=0.255  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++... ++..+|+|.+...   .....+.+.+|+.+++.++||||+++++.+.+.+..+++|||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   82 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY   82 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence            456688999999999999753 6789999998643   223345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++.....++.||+.||+|||++|++||+
T Consensus        83 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  126 (291)
T cd05612          83 VPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRD  126 (291)
T ss_pred             CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            9999999999543  4688999999999999999999999999995

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.83  E-value=1.7e-20  Score=144.86  Aligned_cols=118  Identities=23%  Similarity=0.326  Sum_probs=99.6

Q ss_pred             hhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ....+|+|+||.||+++ ..+|+.||||.+...  ++.-.+-.++|++++++++|+|+|.++.+|.....+++|+|||+.
T Consensus         6 ~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh   85 (396)
T KOG0593|consen    6 KLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH   85 (396)
T ss_pred             hhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch
Confidence            34569999999999995 457899999999654  334445678999999999999999999999999999999999988


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ++.+-|...+ ..++......++.|++.|+.|+|++++|||+
T Consensus        86 -TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRD  126 (396)
T KOG0593|consen   86 -TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRD  126 (396)
T ss_pred             -HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeeccc
Confidence             5545553333 4588889999999999999999999999996

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5e-20  Score=148.70  Aligned_cols=125  Identities=25%  Similarity=0.315  Sum_probs=111.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ...|.+.+.||.|..+.||++. ...+..||||.+..+ .....+.+.+|+..|..++||||++++..|..+..+|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            3455677889999999999995 467899999999865 33446789999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||.+|++.+.+...-...+++..+..+.+++++||.|||++|.|||+
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRd  151 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRD  151 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            99999999999765555689999999999999999999999999996

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.83  E-value=1.1e-19  Score=148.71  Aligned_cols=116  Identities=25%  Similarity=0.332  Sum_probs=101.4

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+++.++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999964 46889999999754   2334457889999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|..++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  120 (328)
T cd05593          81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRD  120 (328)
T ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            999888543  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.83  E-value=7.3e-20  Score=146.77  Aligned_cols=121  Identities=26%  Similarity=0.331  Sum_probs=103.8

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ...+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.++..++|+|++.+.+.+.+.+..++++||+
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05631           3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence            4457899999999999964 568899999986542   222345789999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++.......+++..+..++.|++.||+|||+++|+||+
T Consensus        83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05631          83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRD  127 (285)
T ss_pred             CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            999999888554445689999999999999999999999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.83  E-value=1e-19  Score=143.56  Aligned_cols=122  Identities=28%  Similarity=0.465  Sum_probs=106.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .++++.+.||+|+||.||++.+..+..+++|.+.... .....+..|+.+++.++||||+++++.+...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3456678899999999999988777789999876442 234578899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.... ..+++..+..++.|++.||+|||+++++||+
T Consensus        83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  125 (256)
T cd05114          83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRD  125 (256)
T ss_pred             CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            999999986432 3588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.83  E-value=7.9e-20  Score=144.49  Aligned_cols=126  Identities=23%  Similarity=0.389  Sum_probs=109.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +....+.+.+.||+|+||.||++...++..+++|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..++++|
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            3455667788999999999999987778889999876543 234678999999999999999999999998889999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.......+++.....++.|++.||+|||+++++||+
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~d  128 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD  128 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            99999999999765555688899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=8.6e-20  Score=146.35  Aligned_cols=122  Identities=27%  Similarity=0.349  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |+..+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.+++.++||||+++.+.+.+.+..+++|||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            34567899999999999965 467899999986542   22234577899999999999999999999998999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRD  127 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence            9999999888654445689999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.82  E-value=8.3e-20  Score=152.35  Aligned_cols=120  Identities=21%  Similarity=0.208  Sum_probs=104.1

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +...+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.+++.++||||+++++.+.+.+..++||||
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~   82 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY   82 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence            34567899999999999964 467899999987542   23345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        83 ~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrD  126 (382)
T cd05625          83 IPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRD  126 (382)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999998543  4588888999999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.3e-19  Score=147.23  Aligned_cols=114  Identities=24%  Similarity=0.265  Sum_probs=100.1

Q ss_pred             cCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||+|+||.||++.. .++..+|+|.+...   .......+.+|+.++..++||||+++.+.+...+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999965 35789999998753   233445678999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrD  118 (312)
T cd05585          81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRD  118 (312)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            9999543  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.82  E-value=9e-19  Score=144.62  Aligned_cols=115  Identities=26%  Similarity=0.356  Sum_probs=98.7

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ...+.||+|+||.||++.. .++..|++|.+... .......+.+|+.+++.++|+||+++++.+...+..+++|||+++
T Consensus        77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  156 (353)
T PLN00034         77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG  156 (353)
T ss_pred             hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence            4567899999999999975 46789999998654 333456789999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|....      ..++.....++.||+.||+|||+++|+||+
T Consensus       157 ~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  193 (353)
T PLN00034        157 GSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRD  193 (353)
T ss_pred             Ccccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            9986532      246677888999999999999999999996

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=9.3e-20  Score=149.31  Aligned_cols=120  Identities=23%  Similarity=0.267  Sum_probs=104.8

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++... ++..+|+|.+...   .......+..|+.++..++||||+++++.+...+..+++|||
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            456788999999999999764 5789999999754   223345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        83 ~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d  126 (333)
T cd05600          83 VPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRD  126 (333)
T ss_pred             CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999543  4688999999999999999999999999996

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.82  E-value=5.3e-20  Score=153.03  Aligned_cols=129  Identities=26%  Similarity=0.453  Sum_probs=107.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      +.++...+.+.+.||+|+||.||++..      .++..||+|.+... .......+.+|+.+++.+ +|+||+++++.+.
T Consensus        33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            456667778889999999999999863      12357999999754 333455788999999999 8999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCC-------------------------------------------------------
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDEN-------------------------------------------------------  203 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------  203 (235)
                      ..+..+++|||+++|+|.++++...                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            9999999999999999999885321                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          204 -------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       204 -------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                   ..++++.+...++.||+.||+|||+++|+||+
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrD  237 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRD  237 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence                         12477888999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.82  E-value=1.9e-19  Score=147.09  Aligned_cols=120  Identities=23%  Similarity=0.252  Sum_probs=102.8

Q ss_pred             hhhccCCC--CceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          116 FTTLIGQG--AFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       116 ~~~~lg~G--~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.++||+|  +|+.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++.+..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45679999  6789999964 56889999998754  2333456778999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++.......+++..+..++.|++.||+|||+++|+||+
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~d  126 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRS  126 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            999999998654345589999999999999999999999999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.82  E-value=1.1e-19  Score=143.77  Aligned_cols=127  Identities=25%  Similarity=0.396  Sum_probs=110.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ++.+.++.+.+.||+|++|.||++....+..+++|.+.... ...+.+.+|+.++++++||||+++++.+...+..++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            34556677889999999999999987677889999986543 23457889999999999999999999999989999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.......+++.....++.|++.|+.|||+++++||+
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  128 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRD  128 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            999999999999654434689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.82  E-value=1.6e-20  Score=155.73  Aligned_cols=119  Identities=27%  Similarity=0.388  Sum_probs=101.1

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ++++...+.-.+-||.|+-|.||+|++ .++.||||.++.-.       ..+|.-|++|+||||+.|.|+|....-+|+|
T Consensus       119 WeiPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIi  190 (904)
T KOG4721|consen  119 WEIPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCII  190 (904)
T ss_pred             ccCCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEe
Confidence            444444433345599999999999998 67899999875322       2467789999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+.|.|...|+..  ..++....+.+..+||.||.|||.+.||||+
T Consensus       191 MEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRD  237 (904)
T KOG4721|consen  191 MEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRD  237 (904)
T ss_pred             eeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhc
Confidence            9999999999999654  5688899999999999999999999999996

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=3.6e-20  Score=155.87  Aligned_cols=120  Identities=24%  Similarity=0.378  Sum_probs=107.0

Q ss_pred             hhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+++.||+|+.|.|.+|+ ..+|+.+|||.+.+.   .........+|+.+|+-+.|||++++++++++...+|+++||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            4567889999999999994 568999999999765   223344678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.|++++..  ++++++.++.+++.||+.|+.|+|..+|+||+
T Consensus        94 v~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRD  137 (786)
T KOG0588|consen   94 VPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAFNICHRD  137 (786)
T ss_pred             cCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhhcceecc
Confidence            999999999954  47899999999999999999999999999996

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=1.5e-19  Score=142.70  Aligned_cols=122  Identities=27%  Similarity=0.404  Sum_probs=105.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .++.+.+.||+|+||.||.+.+..+..+++|.+.... .....|.+|+.++..++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4456778899999999999987666679999886443 234578999999999999999999999988888999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.... ..+++.++..++.||+.||+|||+++++||+
T Consensus        83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  125 (256)
T cd05113          83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRD  125 (256)
T ss_pred             CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            999999986533 3689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.82  E-value=2.1e-19  Score=146.32  Aligned_cols=116  Identities=24%  Similarity=0.279  Sum_probs=100.4

Q ss_pred             hccCCCCceeEEEEEe----CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQM----STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +.||+|+||.||++..    ..+..+|+|.+....  ......+..|+.+++.++||||+++++.+.+.+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4699999999999853    357899999997542  2234457789999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  123 (318)
T cd05582          82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRD  123 (318)
T ss_pred             CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            99999998543  4589999999999999999999999999995

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.82  E-value=1.8e-19  Score=150.86  Aligned_cols=95  Identities=26%  Similarity=0.465  Sum_probs=80.0

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCC-CCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLH-HRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~  178 (235)
                      +++....+.+.+.||+|+||.||++.+.      .+..||+|.+.... ....+.+.+|+.++..+. ||||+++++.+.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            5677777778899999999999999752      23579999997542 333457889999999997 999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhc
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYD  201 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~  201 (235)
                      ..+..++++||+++|+|.++++.
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHh
Confidence            98899999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=4.6e-20  Score=152.67  Aligned_cols=116  Identities=28%  Similarity=0.396  Sum_probs=104.3

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .+.||+|+.|.||.+. ...+..||||.+........+-..+|+.+|+..+|+|||.++..|.-.+.+|+||||+++|+|
T Consensus       278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL  357 (550)
T KOG0578|consen  278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL  357 (550)
T ss_pred             hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence            4579999999999994 567889999999876655566789999999999999999999999988999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+.+..   ..+++.++..++++++.||+|||.+||+||+
T Consensus       358 TDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrD  394 (550)
T KOG0578|consen  358 TDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRD  394 (550)
T ss_pred             hhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeec
Confidence            999833   3489999999999999999999999999996

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.81  E-value=2.4e-19  Score=141.75  Aligned_cols=126  Identities=25%  Similarity=0.369  Sum_probs=109.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ++....+.+.+.||+|+||.||++...++..+++|.+..... ....+.+|+.+++.++|+|++++++.+. .+..++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence            456677888899999999999999887889999999875432 3457899999999999999999998864 45689999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.......+++.+...++.|++.||+|||+++++||+
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~d  127 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRD  127 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence            999999999998665556789999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=2.2e-19  Score=142.28  Aligned_cols=117  Identities=22%  Similarity=0.340  Sum_probs=99.8

Q ss_pred             hccCCCCceeEEEEEeCC-------------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          118 TLIGQGAFGPVYKAQMST-------------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      +.||+|+||.||+|.+..             ...+++|.+..........|..|+..+..++||||+++++++.+....+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999999997422             2258888876655555567889999999999999999999999888899


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|..++... ...+++.....++.||+.||+|||+++|+||+
T Consensus        81 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  130 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGN  130 (262)
T ss_pred             EEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCC
Confidence            999999999999888543 34689999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.81  E-value=3.3e-19  Score=140.49  Aligned_cols=123  Identities=27%  Similarity=0.330  Sum_probs=102.7

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCCh--hcHHHHHHHHHHHccCCCCC-ccceeeEEEeCC------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK--QGEKEFQTEVMLLGRLHHRN-LVNLVGYCAEKG------  181 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------  181 (235)
                      ..+...+.||+|+||.||+|. ..+|..||+|.++....  .......+|+.+++.++|+| |+++.+++.+.+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            334445679999999999995 45788999999986533  23345689999999999999 999999998776      


Q ss_pred             EEEEEEEcccCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENY--GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|+||++. ||..++.....  ..++...+..++.||+.||+|||+++|+||+
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRD  145 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRD  145 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            78999999977 99999965432  3577788999999999999999999999996

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=2.8e-19  Score=141.27  Aligned_cols=127  Identities=28%  Similarity=0.431  Sum_probs=111.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ++...++.+.+.||+|+||.||++...++..+++|.+.... ...+++.+|+..++.++|+|++++++.+......+++|
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            35566777889999999999999987777889999987543 23457899999999999999999999998888999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.......+++..+..++.|++.|++|||+++++|++
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~d  128 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRD  128 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999665445689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.81  E-value=2.9e-19  Score=146.23  Aligned_cols=116  Identities=22%  Similarity=0.292  Sum_probs=100.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+..|..++..+ +||||+++++++.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3589999999999965 46789999999754   223345678899998888 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus        81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d  121 (329)
T cd05588          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRD  121 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            9999888543  5689999999999999999999999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.81  E-value=1.6e-19  Score=149.94  Aligned_cols=124  Identities=19%  Similarity=0.222  Sum_probs=105.4

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      +....+.+.+.||+|+||.||++.. .++..+|+|.+...   .......+..|+.+++.++||||+++++.+.+.+..+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            3345566778999999999999965 46789999999643   2233345778999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++|+|.+++..   ..++...+..++.||+.||+|||+++|+||+
T Consensus       120 lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  167 (370)
T cd05596         120 MVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRD  167 (370)
T ss_pred             EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99999999999999853   3478888899999999999999999999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=5.4e-19  Score=141.20  Aligned_cols=123  Identities=26%  Similarity=0.336  Sum_probs=108.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..|.+.+.||.|+||.||++... ++..+++|.+........+.+..|+.++++++|||++++++.+......+++|||+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            34677788999999999999763 57899999997666666678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++... ...+++..+..++.|++.||.|||+++++||+
T Consensus        85 ~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  128 (280)
T cd06611          85 DGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRD  128 (280)
T ss_pred             CCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999998543 24689999999999999999999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=9.7e-21  Score=144.87  Aligned_cols=127  Identities=23%  Similarity=0.299  Sum_probs=107.7

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceee-EEEeCCE-E
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVG-YCAEKGQ-H  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~  183 (235)
                      ...+.+.+.+.||.|.||.||++. ..+|..+|.|.++-+  +.+..++...|+.+|++++|||||++++ .+..++. +
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            344556778899999999999994 568999999998755  5666778999999999999999999998 4444444 8


Q ss_pred             EEEEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--ccccC
Q 026630          184 MLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHD--GV--SCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~--~~--ivHr~  235 (235)
                      +++||||..|||...+..  ..+..+++..++.+..|++.||.++|+  .+  |+||+
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRD  153 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRD  153 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeecc
Confidence            899999999999999852  345679999999999999999999999  66  99996

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.81  E-value=4.6e-19  Score=139.40  Aligned_cols=117  Identities=26%  Similarity=0.426  Sum_probs=101.7

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      +.||+|+||.||++.. .++..+++|.+... .......+.+|+.+++.++||||+++++.+......+++|||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3589999999999975 46788999987644 334456789999999999999999999999998999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++... ...+++.++..++.|++.||+|||+++++||+
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  119 (252)
T cd05084          81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRD  119 (252)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            9998543 34588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.81  E-value=6.5e-19  Score=139.72  Aligned_cols=124  Identities=25%  Similarity=0.381  Sum_probs=107.6

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ...++.+.+.||+|+||.||++.. .++..+++|.+..........+.+|+.++..++||||+++++.+...+..++++|
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            344567788999999999999975 5678899999875544445567899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++...  ..+++.++..++.|++.||+|||+++|+||+
T Consensus        87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  131 (267)
T cd06646          87 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRD  131 (267)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99999999988543  4689999999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.81  E-value=4.1e-19  Score=140.39  Aligned_cols=125  Identities=28%  Similarity=0.399  Sum_probs=107.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +...++.+.+.||+|+||.||++....+..+++|.+..... ....+.+|+.++++++|+|++++++.+.. ...+++||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e   80 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTE   80 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEE
Confidence            44556778899999999999999877778899999865432 34578999999999999999999988754 45789999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05070          81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD  127 (260)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999999765445689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.8e-19  Score=146.44  Aligned_cols=121  Identities=22%  Similarity=0.240  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+...   .....+.+..|..++..++|+||+.+.+.+.+.+..++||||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY   82 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence            45678899999999999975 45789999998743   223345688899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        83 ~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (331)
T cd05597          83 YVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRD  127 (331)
T ss_pred             CCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECC
Confidence            9999999999542 34588999999999999999999999999996

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.81  E-value=4.7e-19  Score=140.53  Aligned_cols=123  Identities=27%  Similarity=0.464  Sum_probs=105.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ..+.+.+.||+|+||.||+|.+..    ...+++|.+... ......+|.+|+..+..++||||+++++.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            345667889999999999997632    357899988755 344456789999999999999999999999998999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++.... ..+++.....++.|++.||+|||+++++||+
T Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~d  131 (266)
T cd05033          84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRD  131 (266)
T ss_pred             EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999986533 4689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.81  E-value=4.7e-19  Score=144.71  Aligned_cols=116  Identities=24%  Similarity=0.287  Sum_probs=100.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999964 46889999999754   2233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +|..++...  ..+++..+..++.||+.||+|||+ ++|+||+
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrD  121 (325)
T cd05594          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRD  121 (325)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            999888443  468999999999999999999997 8999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.81  E-value=5.5e-19  Score=141.35  Aligned_cols=116  Identities=28%  Similarity=0.371  Sum_probs=99.2

Q ss_pred             cCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||+|+||.||++.. .++..+|+|.+....   ....+.+..|+.+++.++|+||+++.+.+......+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999965 467899999986542   22334678899999999999999999999998999999999999999


Q ss_pred             hhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++..  .....+++..+..++.||+.||+|||+++|+||+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  122 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRD  122 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            888743  2234689999999999999999999999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.81  E-value=2.7e-19  Score=148.11  Aligned_cols=120  Identities=21%  Similarity=0.248  Sum_probs=104.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +++.+.||+|+||.||++.. .++..+|+|.++..   .......+..|+.++..++||||+++++.+.+.+..++||||
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~   82 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF   82 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            34567899999999999965 46789999999753   223345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        83 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrD  126 (360)
T cd05627          83 LPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRD  126 (360)
T ss_pred             CCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence            9999999998543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.81  E-value=2.2e-19  Score=149.17  Aligned_cols=121  Identities=19%  Similarity=0.212  Sum_probs=103.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+++.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+++.++||||+++++.+.+.+..++||
T Consensus        43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05621          43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM  122 (370)
T ss_pred             HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4455667899999999999975 35788999998643   2223445788999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++..   ..++...+..++.||+.||+|||+++|+||+
T Consensus       123 Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD  167 (370)
T cd05621         123 EYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRD  167 (370)
T ss_pred             cCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            99999999999843   2478889999999999999999999999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.81  E-value=4.4e-19  Score=146.25  Aligned_cols=122  Identities=25%  Similarity=0.360  Sum_probs=107.7

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---hcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK---QGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l  185 (235)
                      ...|.+.+.||.|.||.||++.. .+|..+|+|.+.+...   .......+|+.+|..+. ||||+.+.+.+++....++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            34456678899999999999964 4589999999976533   24467899999999997 9999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||++.+|+|.+.+...   .+++.++..++.||+.++.|||+.||+||+
T Consensus       114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrD  160 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRD  160 (382)
T ss_pred             EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceecc
Confidence            99999999999999654   399999999999999999999999999996

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.81  E-value=4.7e-19  Score=145.21  Aligned_cols=125  Identities=21%  Similarity=0.296  Sum_probs=106.8

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +....|.+.+.||+|+||.||++... ++..+++|.+... .......+.+|+.+++.++||||+++++.+.+.+..+++
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence            34456677889999999999999754 5778899988754 333445789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      |||+++|+|.+++...  ..+++.....++.|++.||+|||++ +++||+
T Consensus        82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~d  129 (333)
T cd06650          82 MEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD  129 (333)
T ss_pred             EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            9999999999999543  4588888999999999999999975 799985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.81  E-value=2.3e-19  Score=147.66  Aligned_cols=128  Identities=30%  Similarity=0.479  Sum_probs=104.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDS-KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      +++..++.+.+.||+|+||.||++..      ..++.+|+|.++... ......+.+|+.++..+ +||||+++++.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            45566788899999999999999963      346789999997542 33455788999999999 78999999998755


Q ss_pred             -CCEEEEEEEcccCCChhhhhhcCC-------------------------------------------------------
Q 026630          180 -KGQHMLVYVFMSKGSLASHLYDEN-------------------------------------------------------  203 (235)
Q Consensus       180 -~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------  203 (235)
                       ....+++|||+++|+|.++++...                                                       
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence             456789999999999999985421                                                       


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          204 ----------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       204 ----------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                ...+++.+...++.||+.||+|||+++|+||+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d  204 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRD  204 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence                      12367788899999999999999999999995

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=4.3e-19  Score=144.85  Aligned_cols=116  Identities=24%  Similarity=0.364  Sum_probs=100.0

Q ss_pred             hccCCCCceeEEEEEe----CCCCEEEEEEeecC----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQM----STGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.||+|+||.||++..    ..+..+|+|.+...    .......+..|+.+++.++||||+++++.+..++..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5699999999999964    35778999998753    223344678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+.+..+..++.||+.||+|||+++|+||+
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  125 (323)
T cd05584          82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRD  125 (323)
T ss_pred             CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999999998543  4578888899999999999999999999996

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=3.9e-19  Score=142.76  Aligned_cols=120  Identities=23%  Similarity=0.269  Sum_probs=101.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+... .......+.+|+.+++.++||||+++++.+...+..+++|||++
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD   86 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence            45668899999999999965 46789999998654 22334467899999999999999999999998889999999997


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        87 ~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  128 (288)
T cd07871          87 S-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRD  128 (288)
T ss_pred             c-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            5 999988543 24578889999999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.81  E-value=4.7e-19  Score=142.10  Aligned_cols=121  Identities=26%  Similarity=0.343  Sum_probs=103.7

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ...+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.++..++|+|++.+.+.+...+..++++||+
T Consensus         3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05632           3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence            3457799999999999965 467899999986542   222345788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++..+..++.|++.||.|||+++|+||+
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~d  127 (285)
T cd05632          83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRD  127 (285)
T ss_pred             cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            999999888654445689999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.81  E-value=3.5e-19  Score=141.07  Aligned_cols=125  Identities=26%  Similarity=0.416  Sum_probs=108.0

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ....+.+.+.||+|+||.||++.. ..+..+++|.+..+ ......+.+|+.++..++||||+++++.+...+..+++||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            344566778899999999999965 35788999998644 3335678999999999999999999999999899999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.......+++..++.++.|++.||+|||+++++||+
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  129 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD  129 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            99999999999665555689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.80  E-value=3.9e-19  Score=142.24  Aligned_cols=124  Identities=30%  Similarity=0.495  Sum_probs=104.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      .++.+.+.||+|+||.||+|..     ..+..+++|.+... .......+.+|+.+++.++||||+++++.+......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4456678899999999999963     24568999998754 33444678899999999999999999999999899999


Q ss_pred             EEEcccCCChhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDEN---------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++++|.+++....               ...+++.+.+.++.|++.||+|||+++++||+
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  149 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKD  149 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhc
Confidence            999999999999985321               12477888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.80  E-value=3.1e-19  Score=141.13  Aligned_cols=126  Identities=22%  Similarity=0.368  Sum_probs=108.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ++..+++.+.+.||+|+||.||++....+..+++|.+.... .....+.+|+.+++.++|+|++++.+.+.. ...+++|
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            45566778889999999999999987677789999886442 234578899999999999999999999877 6789999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.......+++..++.++.|++.||+|||+.+++||+
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (260)
T cd05073          80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD  127 (260)
T ss_pred             EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            999999999999665445678889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=4.6e-19  Score=139.70  Aligned_cols=122  Identities=33%  Similarity=0.487  Sum_probs=108.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ..+.+.+.||.|+||.||++.. .++.+++|.+..... ..+.+.+|+.+++.++|+|++++++.+.+.+..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            4556678899999999999987 588999999975543 55678999999999999999999999988889999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++.......+++.....++.|++.||.|||+++++||+
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d  127 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRD  127 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchh
Confidence            99999999655444689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.80  E-value=4.7e-19  Score=140.62  Aligned_cols=123  Identities=27%  Similarity=0.467  Sum_probs=104.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.+.+.||+|+||.||++...    .+..+++|.+... .......+.+|+.+++.++||||+++.+.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45567789999999999999652    2337899988654 334456789999999999999999999999988999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++.... ..+++.+...++.|++.||+|||+++++||+
T Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~d  131 (267)
T cd05066          84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRD  131 (267)
T ss_pred             EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehh
Confidence            99999999999996533 4589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2.8e-19  Score=147.33  Aligned_cols=120  Identities=22%  Similarity=0.260  Sum_probs=105.3

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++... ++..+|+|.+...   .......+..|+.++..++||||+++++.+.+.+..++||||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            456788999999999999753 6889999999754   223445788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        83 ~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~D  126 (350)
T cd05573          83 MPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRD  126 (350)
T ss_pred             CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            9999999999544  5689999999999999999999999999995

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.80  E-value=2.3e-19  Score=140.27  Aligned_cols=119  Identities=24%  Similarity=0.286  Sum_probs=100.0

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChh--cHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEEEc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ--GEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~  189 (235)
                      ...+.|++|.||.||+|.. ++++.||+|.++.+...  .--.-++|+.++.+++|||||.+-.+....  +..|+||||
T Consensus        79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~  158 (419)
T KOG0663|consen   79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY  158 (419)
T ss_pred             HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence            3456799999999999964 56889999999755322  122458999999999999999998887553  578999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+. ||..++. ...++|...++..++.|+++|++|||++.|+||+
T Consensus       159 ~Eh-DLksl~d-~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRD  202 (419)
T KOG0663|consen  159 VEH-DLKSLME-TMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRD  202 (419)
T ss_pred             HHh-hHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHhhceeEecc
Confidence            988 9999984 3457899999999999999999999999999996

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.80  E-value=6.8e-19  Score=138.86  Aligned_cols=121  Identities=27%  Similarity=0.433  Sum_probs=105.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ++++.+.||+|+||.||++....+..+++|.+.... .....+.+|+.+++.++||||+++++.+...+..++++||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            456778899999999999987667789999886432 2345688999999999999999999999988899999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.... ..+++.....++.|++.||+|||+++++||+
T Consensus        84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  125 (256)
T cd05059          84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRD  125 (256)
T ss_pred             CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            99999986433 3689999999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.80  E-value=4.8e-19  Score=140.27  Aligned_cols=125  Identities=27%  Similarity=0.385  Sum_probs=105.6

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +...++.+.+.||+|+||.||++...++..+++|.+..... ..+.|.+|+.++..++||||+++++.+.. ...+++||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e   80 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE   80 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEE
Confidence            34556778899999999999999876667899999875432 33578999999999999999999988754 45789999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (262)
T cd05071          81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  127 (262)
T ss_pred             cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            99999999999654444578999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.80  E-value=1.3e-18  Score=137.97  Aligned_cols=123  Identities=27%  Similarity=0.413  Sum_probs=107.3

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...+.+.+.||+|+||.||++.. .++..+++|.++.........+.+|+.+++.++||||+++++.+...+..++++||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            34566778899999999999964 46789999998766544555678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++.+...++.|++.||.|||++|++||+
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  131 (267)
T cd06645          88 CGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRD  131 (267)
T ss_pred             cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999999998543  4689999999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=1.6e-19  Score=147.87  Aligned_cols=123  Identities=20%  Similarity=0.290  Sum_probs=107.0

Q ss_pred             HhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE-EEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ-HMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e  188 (235)
                      .|.+.+++|+|+||.++... ..++..+++|.+.-.  ..........|+.+++++.|||||.+.+.+..++. .+++|+
T Consensus         5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~   84 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME   84 (426)
T ss_pred             hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence            45667899999999998874 335678999998755  33444467899999999999999999999988776 999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+||+|.+.+...+...|++..+..++.||+.|+.|||+++|+||+
T Consensus        85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRD  131 (426)
T KOG0589|consen   85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRD  131 (426)
T ss_pred             ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            99999999999877767899999999999999999999999999996

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.80  E-value=3.7e-19  Score=144.71  Aligned_cols=121  Identities=28%  Similarity=0.364  Sum_probs=99.8

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCCh--------------hcHHHHHHHHHHHccCCCCCccceeeE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK--------------QGEKEFQTEVMLLGRLHHRNLVNLVGY  176 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~~~~~  176 (235)
                      ..|.+.+.||+|.||.|-++. ..++..+|+|.+.+...              ...+...+|+.+|++++|||||+++.+
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            445667789999999999995 34688999999964311              112467899999999999999999999


Q ss_pred             EEe--CCEEEEEEEcccCCChhhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAE--KGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+  .+.+|||+|||..|.+...-   ...+ ++..++..|..+++.||+|||.+|||||+
T Consensus       177 LDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRD  235 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRD  235 (576)
T ss_pred             ecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence            765  45789999999998876543   3344 89999999999999999999999999996

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.80  E-value=4.4e-19  Score=144.31  Aligned_cols=124  Identities=24%  Similarity=0.426  Sum_probs=102.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...++...+.||+|+||.||+|.+. ++.    .+++|.+... .....+.+..|+.+++.++||||++++|.+... ..
T Consensus         5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~   83 (316)
T cd05108           5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   83 (316)
T ss_pred             chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence            3455667788999999999999753 333    4899998654 334456788999999999999999999998765 46


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++|+|.+++.... ..+++...+.++.||+.||+|||+++|+||+
T Consensus        84 ~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~d  134 (316)
T cd05108          84 QLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRD  134 (316)
T ss_pred             eeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence            79999999999999996532 4578889999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.80  E-value=5.4e-19  Score=142.91  Aligned_cols=128  Identities=26%  Similarity=0.429  Sum_probs=107.9

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ++...++.+.+.||+|+||.||++..      ..+..+|+|.+... .....+.+..|+.+++++ +||||+++++.+..
T Consensus        31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  110 (302)
T cd05055          31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI  110 (302)
T ss_pred             cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence            34455667788999999999999863      12347999988654 334456789999999999 89999999999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+..++++||+++|+|.+++.......+++.+...++.|++.||+|||+++++||+
T Consensus       111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~d  166 (302)
T cd05055         111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRD  166 (302)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhh
Confidence            99999999999999999999654444489999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.80  E-value=1.2e-18  Score=136.91  Aligned_cols=117  Identities=30%  Similarity=0.491  Sum_probs=102.7

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      ++||+|+||.||++...++..+++|.+.... ......+.+|+..++.++||||+++++.+...+..+++|||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999987778899999986553 333457889999999999999999999999988999999999999999


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.... ..+++.....++.|++.||.|||++|++||+
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d  118 (250)
T cd05085          81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRD  118 (250)
T ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9985432 4578999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.80  E-value=6e-19  Score=144.45  Aligned_cols=123  Identities=21%  Similarity=0.266  Sum_probs=105.7

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ..++.+.+.||+|+||.||++.. .++..+++|.+... .......+.+|+.+++.++||||+++++.+.+.+..+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            34556678899999999999975 35778999998755 33445678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||++ +|+||+
T Consensus        84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~d  129 (331)
T cd06649          84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRD  129 (331)
T ss_pred             cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCC
Confidence            99999999999543  4588899999999999999999986 699985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.80  E-value=6.3e-19  Score=140.38  Aligned_cols=124  Identities=27%  Similarity=0.452  Sum_probs=104.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+.....||.|+||.||++...      ....+++|.+...... ....+.+|+.++++++|+||+++++.+.+....+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            44556678999999999999742      2457899988654333 4567999999999999999999999998888999


Q ss_pred             EEEEcccCCChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDEN-------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++....       ...+++..+..++.|++.||+|||+++++||+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~d  142 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRD  142 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCc
Confidence            9999999999999996433       12589999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.80  E-value=9.3e-19  Score=139.04  Aligned_cols=117  Identities=28%  Similarity=0.343  Sum_probs=97.3

Q ss_pred             ccCCCCceeEEEEEeCC---CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          119 LIGQGAFGPVYKAQMST---GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .||+|+||.||+|....   ...+++|.+... .......+.+|+..++.++||||+++++.+...+..+++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            48999999999996433   346888877544 33344578899999999999999999999999899999999999999


Q ss_pred             hhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDEN---YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |.+++....   ...+++.....++.||+.||+|||+++|+||+
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  125 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSD  125 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEeccc
Confidence            999996532   12346777889999999999999999999996

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.80  E-value=8.2e-19  Score=140.71  Aligned_cols=121  Identities=27%  Similarity=0.347  Sum_probs=103.2

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ...+.||+|+||.||++.. .+++.+|+|.+....   ......+..|+.+++.++|+|++.+.+.+.+.+..+++|||+
T Consensus         3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05630           3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence            3457799999999999965 467899999986542   222345778999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++.++..++.|++.||+|||+++++||+
T Consensus        83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05630          83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRD  127 (285)
T ss_pred             CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            999999988654445689999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.80  E-value=6.6e-19  Score=150.90  Aligned_cols=122  Identities=17%  Similarity=0.189  Sum_probs=104.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CC-CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-ST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++.. .+ +..+++|.+..........+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            56678899999999999954 33 56788887765555555677889999999999999999999999999999999999


Q ss_pred             CCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.+  ....++++..+..++.||+.||+|||+++|+||+
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrD  194 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRD  194 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECC
Confidence            9999988853  2345688999999999999999999999999996

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=4.9e-19  Score=147.11  Aligned_cols=124  Identities=19%  Similarity=0.209  Sum_probs=105.5

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      +....+.+.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|..+++.++||||+++++.+.+.+..+
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  119 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            3445667778999999999999965 45788999998643   2233445778999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++..   ..++...+..++.||+.||+|||+++|+||+
T Consensus       120 lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  167 (371)
T cd05622         120 MVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRD  167 (371)
T ss_pred             EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            99999999999999853   3478888999999999999999999999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=9.6e-19  Score=140.03  Aligned_cols=122  Identities=30%  Similarity=0.455  Sum_probs=104.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l  185 (235)
                      .+.+.+.||+|+||.||++..     ..+..+++|.+........+.+.+|+.++..++||||+++.+.+..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            345678899999999999864     2567899999876666666788999999999999999999998743  356889


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++|+|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus        85 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~d  133 (284)
T cd05081          85 VMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRD  133 (284)
T ss_pred             EEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            99999999999999543 24589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.80  E-value=1e-18  Score=142.56  Aligned_cols=116  Identities=29%  Similarity=0.331  Sum_probs=97.1

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHH-HHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+....   ......+..|.. +++.++||||+++.+.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3589999999999975 468899999997542   222334555554 56788999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~d  121 (323)
T cd05575          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRD  121 (323)
T ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            9999998543  4688999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.80  E-value=9.4e-19  Score=142.70  Aligned_cols=116  Identities=24%  Similarity=0.272  Sum_probs=98.8

Q ss_pred             hccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++... .+..+|+|.+...   .......+..|..++..+ +||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            35899999999999753 5789999998754   223344577888888766 899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  121 (321)
T cd05591          81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRD  121 (321)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            9999888543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.80  E-value=8.5e-19  Score=143.14  Aligned_cols=118  Identities=25%  Similarity=0.334  Sum_probs=98.8

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHH---HccCCCCCccceeeEEEeCCEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVML---LGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+.+.||+|+||.||++.. .++..+|+|.+...   .....+.+..|..+   +..++||||+++++++...+..++||
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            4567899999999999965 46789999999754   22233456666654   45678999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|...+..   ..+++..+..++.||+.||+|||++|++||+
T Consensus        82 E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrd  126 (324)
T cd05589          82 EYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRD  126 (324)
T ss_pred             cCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence            99999999988843   4589999999999999999999999999995

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.80  E-value=1.2e-18  Score=139.27  Aligned_cols=116  Identities=28%  Similarity=0.350  Sum_probs=99.1

Q ss_pred             cCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||+|+||.||++.. .++..+++|.+....   ......+..|+.++..++||||+++.+.+......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999964 458899999986431   12233456799999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+.+.......+++..+..++.||+.||+|||+++++||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  120 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD  120 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence            9888654445688999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=9.7e-19  Score=141.69  Aligned_cols=129  Identities=28%  Similarity=0.460  Sum_probs=107.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGY  176 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~  176 (235)
                      .++...++.+.+.||+|+||.||++...        ....+++|.+... .......+..|+.++..+ +||||+++++.
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            3555667888899999999999998642        2246999998754 233455788899999999 89999999999


Q ss_pred             EEeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +...+..+++|||+++|+|.+++....              ...+++.+.+.++.|++.||+|||++|++||+
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d  165 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRD  165 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            999999999999999999999996432              12478899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.80  E-value=6.9e-19  Score=144.10  Aligned_cols=121  Identities=20%  Similarity=0.187  Sum_probs=103.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+...   .......+..|..++..++|+||+.+.+.+.+.+..+++|||
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey   82 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY   82 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            45678899999999999975 35788999998653   223344578889999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++..+..++.|++.||+|||+++|+||+
T Consensus        83 ~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrD  127 (331)
T cd05624          83 YVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRD  127 (331)
T ss_pred             CCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            9999999999642 24588899999999999999999999999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.80  E-value=9.5e-19  Score=141.48  Aligned_cols=121  Identities=25%  Similarity=0.322  Sum_probs=102.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||++... ++..+|+|.+.... ......+.+|+.+++.++||||+++.+++.+....+++|||+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   85 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYV   85 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECC
Confidence            3556788999999999999754 67899999986542 223345778999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++... ...++...+..++.||+.||+|||+++|+||+
T Consensus        86 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  128 (303)
T cd07869          86 H-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRD  128 (303)
T ss_pred             C-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            5 5888888543 34588889999999999999999999999996

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.80  E-value=8.8e-19  Score=139.15  Aligned_cols=123  Identities=27%  Similarity=0.480  Sum_probs=105.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC-C---CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST-G---ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ..+.+.+.||+|+||.||+|.... +   ..+++|.+... .......|..|+..++.++||||+++.+.+.+.+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            345677889999999999997532 2   36999998654 444566899999999999999999999999998999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++++|.+++... ...+++.+...++.|++.|++|||++|++||+
T Consensus        84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~d  131 (269)
T cd05065          84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRD  131 (269)
T ss_pred             EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            9999999999998543 34589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=4.4e-19  Score=148.14  Aligned_cols=121  Identities=24%  Similarity=0.320  Sum_probs=105.2

Q ss_pred             HhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      -|.+.+.||+|.|+.|.++. ...+..||+|.+.+.  +....+.+.+|+++|+.++|||||+++.+......+|+||||
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ey  136 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEY  136 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEe
Confidence            34556889999999999995 457899999999765  344445688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+|++++++...  .......+..+..|+..+++|||+++||||+
T Consensus       137 a~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrd  180 (596)
T KOG0586|consen  137 ASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRD  180 (596)
T ss_pred             ccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccc
Confidence            9999999999643  3455688899999999999999999999996

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.80  E-value=1.2e-18  Score=142.41  Aligned_cols=116  Identities=28%  Similarity=0.312  Sum_probs=97.2

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHH-HHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|.. +++.++||||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3589999999999964 46889999998754   2223345556654 46778999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++..  ...+++..+..++.||+.||+|||++||+||+
T Consensus        81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~givH~D  121 (325)
T cd05604          81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSINIVYRD  121 (325)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            999988853  35689999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.80  E-value=8.5e-19  Score=140.74  Aligned_cols=128  Identities=24%  Similarity=0.391  Sum_probs=105.2

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++...++.+.+.||+|+||.||+|...      .+..+++|.+.... ......+.+|+..++.++||||+++++.+...
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            344567778899999999999998542      24579999876442 33445688999999999999999999999888


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN--------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+++|+|.+++....        ...+++.....++.|++.||.|||+++++||+
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  144 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRD  144 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence            89999999999999999995421        23356778899999999999999999999995

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=6.3e-19  Score=141.97  Aligned_cols=127  Identities=24%  Similarity=0.431  Sum_probs=105.5

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC---------------CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccc
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST---------------GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN  172 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~  172 (235)
                      ++..++.+.+.||+|+||.||++....               ...+++|.+... .......|.+|+.++++++|||+++
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            345677788999999999999985421               235899998755 3344557899999999999999999


Q ss_pred             eeeEEEeCCEEEEEEEcccCCChhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDEN----------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       173 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.+...+..+++|||+++++|.+++....          ...+++...+.++.|++.||+|||+++++||+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  154 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD  154 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence            9999999899999999999999999985321          12367888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.79  E-value=8.5e-19  Score=141.79  Aligned_cols=128  Identities=28%  Similarity=0.485  Sum_probs=107.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC  177 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~  177 (235)
                      ++....+.+.+.||+|+||.||++...        ++..+++|.+... .......+.+|+..+..+ +||||+++++.+
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   90 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC   90 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence            466677778899999999999999631        2347899988644 334456789999999999 899999999999


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ......+++|||+++|+|.+++....              ...+++.++..++.||+.||+|||++|++||+
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~d  162 (304)
T cd05101          91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRD  162 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999999999999999999996431              13477888999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.79  E-value=1.3e-18  Score=142.42  Aligned_cols=116  Identities=21%  Similarity=0.292  Sum_probs=99.2

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3589999999999975 45788999999754   223344577888887766 899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~D  121 (329)
T cd05618          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRD  121 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            9999888543  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.79  E-value=9.2e-19  Score=138.05  Aligned_cols=115  Identities=28%  Similarity=0.505  Sum_probs=97.1

Q ss_pred             hccCCCCceeEEEEEeCCCC-----------EEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMSTGE-----------TVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +.||+|+||.||++......           .+++|.+...... ...|.+|+.+++.++||||+++++.+.. +..+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            35899999999999764322           4777776544333 5688999999999999999999999887 778999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++.... ..+++..+..++.||+.||+|||+++++||+
T Consensus        79 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  126 (259)
T cd05037          79 EEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGN  126 (259)
T ss_pred             EEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeccc
Confidence            99999999999996543 2688999999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.79  E-value=1e-18  Score=139.45  Aligned_cols=125  Identities=31%  Similarity=0.529  Sum_probs=106.5

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ..++.+.+.||+|+||.||++...      .+..+++|.+...... ..+.+.+|+.++..++||||+++++.+......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            455677889999999999999652      3468999998765333 456899999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDEN------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++....            ...+++.+...++.|++.|++|||+++++||+
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~d  147 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRD  147 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccc
Confidence            99999999999999995421            23478888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.79  E-value=1.1e-18  Score=142.11  Aligned_cols=116  Identities=24%  Similarity=0.321  Sum_probs=96.6

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHcc-CCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGR-LHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..||+|.+...   .......+..|..++.. .+||||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3589999999999975 45778999999754   22233445566666654 4899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..++......++.||+.||+|||+++|+||+
T Consensus        81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d  121 (316)
T cd05592          81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRD  121 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            9999988543  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.79  E-value=9.7e-19  Score=138.28  Aligned_cols=125  Identities=26%  Similarity=0.381  Sum_probs=105.5

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +...++.+...||+|+||.||++....+..+++|.+.... ...+.+.+|+.+++.++|||++++++.+.. +..+++||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTE   80 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEE
Confidence            3445667778899999999999987667789999876443 234578899999999999999999988754 56789999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD  127 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            99999999999665445588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.79  E-value=7.9e-19  Score=143.62  Aligned_cols=121  Identities=20%  Similarity=0.227  Sum_probs=104.5

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+....   ......+..|+.++..++||||+++.+.+.+.+..++||||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY   82 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence            45668899999999999964 467899999997542   23345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++..+..++.||+.||.|||+++|+||+
T Consensus        83 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~D  127 (330)
T cd05601          83 QPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRD  127 (330)
T ss_pred             CCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccc
Confidence            9999999999543 24689999999999999999999999999996

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.79  E-value=6.9e-19  Score=140.31  Aligned_cols=127  Identities=24%  Similarity=0.305  Sum_probs=101.6

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEE-EeC
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYC-AEK  180 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~  180 (235)
                      +.+.+.++..++.+|.||.||.|.|.      +.+.|.+|.++.. +.-+...++.|...+..+.|||+.+..+.+ ++.
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~  360 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY  360 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence            44455556678999999999999653      3345667776544 444556788999999999999999999987 456


Q ss_pred             CEEEEEEEcccCCChhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYD------ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++++.++..|+|..||..      ...+.++..+.+.++.|++.||+|||+++|||.+
T Consensus       361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkD  421 (563)
T KOG1024|consen  361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKD  421 (563)
T ss_pred             CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccch
Confidence            788999999999999999972      2234567788999999999999999999999964

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.79  E-value=9.5e-19  Score=142.64  Aligned_cols=115  Identities=25%  Similarity=0.315  Sum_probs=98.7

Q ss_pred             ccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          119 LIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      .||+|+||.||++.. .++..+|+|.+...   .......+..|..++..+ +||||+++++.+.+.+..++||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            589999999999975 45789999998754   223345677888888766 7999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++...  ..+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~d  121 (320)
T cd05590          82 DLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRD  121 (320)
T ss_pred             hHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            999988543  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.79  E-value=9.7e-19  Score=143.37  Aligned_cols=131  Identities=30%  Similarity=0.466  Sum_probs=109.0

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCcccee
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLV  174 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~  174 (235)
                      ..+++...++++.+.||+|+||.||++...        ....+++|.+... .....+.+.+|+.++.++ +||||++++
T Consensus         5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (334)
T cd05100           5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL   84 (334)
T ss_pred             cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence            345677778888999999999999999631        1236899988654 334456789999999999 899999999


Q ss_pred             eEEEeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          175 GYCAEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       175 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+...+..++++||+++|+|.+++....              ...+++.+++.++.|++.||+|||++|++||+
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~d  159 (334)
T cd05100          85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRD  159 (334)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            99999889999999999999999985421              23478888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.79  E-value=1.4e-18  Score=136.71  Aligned_cols=121  Identities=21%  Similarity=0.297  Sum_probs=106.4

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.||+|++|.||++.. .++..+++|.+...  ......++..|+.+++.++|||++++++.+...+..++++||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08529           3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAE   82 (256)
T ss_pred             eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCC
Confidence            4567899999999999975 46789999998643  34556678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++.......+++.....++.|++.||.|||+++++||+
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~d  126 (256)
T cd08529          83 NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRD  126 (256)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999765456789999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=1.4e-18  Score=141.40  Aligned_cols=116  Identities=22%  Similarity=0.311  Sum_probs=97.7

Q ss_pred             hccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHcc-CCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGR-LHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++... ++..+|+|.++...   ......+..|..++.. ++||||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            35899999999999753 56789999997541   2233456677777765 4999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..+++.+...++.|++.||+|||+++|+||+
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrd  121 (316)
T cd05619          81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRD  121 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            9999998543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.79  E-value=2.2e-18  Score=135.78  Aligned_cols=122  Identities=18%  Similarity=0.292  Sum_probs=105.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +.+.+.||+|+||.||++.. .++..+++|.++.. .....+.+..|+.+++.++|||++++.+.+.+.+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            34568899999999999964 46789999998643 34445678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.......++......++.|++.||.|||+++++|++
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d  125 (255)
T cd08219          82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRD  125 (255)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            99999998655555688999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.79  E-value=1.3e-18  Score=138.31  Aligned_cols=117  Identities=28%  Similarity=0.321  Sum_probs=97.9

Q ss_pred             ccCCCCceeEEEEEeCC---CCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          119 LIGQGAFGPVYKAQMST---GETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .||+|+||.||+|....   +..+++|.++... ......+.+|+.+++.++||||+++++.+.+....+++|||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999997533   3578999886543 3344578899999999999999999999988888999999999999


Q ss_pred             hhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDEN---YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |.+++....   ....++.....++.|++.||+|||+++++||+
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d  125 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSD  125 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence            999996432   22456777889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.79  E-value=3.2e-19  Score=140.91  Aligned_cols=117  Identities=23%  Similarity=0.373  Sum_probs=99.6

Q ss_pred             hccCCCCceeEEEEEeCC--------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMST--------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.||+|+||.||++....        ...+++|.+........+.+..|..+++.++|||++++++.+...+..+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999996422        234788887655545556788999999999999999999999988889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++.... ..+++.....++.||+.||+|||+++|+||+
T Consensus        81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  125 (258)
T cd05078          81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGN  125 (258)
T ss_pred             CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            99999999996533 3588999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.79  E-value=1.4e-18  Score=142.08  Aligned_cols=116  Identities=20%  Similarity=0.271  Sum_probs=99.9

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .....+.+..|..++..+ +||||+.+.+++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3589999999999965 45788999999754   223345678898888888 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD  121 (327)
T cd05617          81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRD  121 (327)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            9999888443  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.79  E-value=1.5e-18  Score=141.52  Aligned_cols=116  Identities=30%  Similarity=0.307  Sum_probs=96.8

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHH-HHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|.. +++.++||||+++.+.+.+.+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3589999999999975 46789999998753   2223344556654 57888999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|...+...  ..++......++.||+.||+|||+++|+||+
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~D  121 (321)
T cd05603          81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRD  121 (321)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            9999888543  4588888999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.79  E-value=3.7e-18  Score=136.56  Aligned_cols=121  Identities=27%  Similarity=0.382  Sum_probs=105.7

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      |++.+.||+|+||.||++... ++..+++|.+..........+.+|+.+++.++|||++++.+.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            456788999999999999754 4677889988665556667889999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|..++... ..++++..+..++.|++.||+|||+.+++||+
T Consensus        87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~d  128 (282)
T cd06643          87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRD  128 (282)
T ss_pred             CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            9999887542 34689999999999999999999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.79  E-value=1.1e-18  Score=142.53  Aligned_cols=120  Identities=25%  Similarity=0.294  Sum_probs=100.8

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCC-CCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHH-RNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +.+.+.||+|+||.||++... .+..+|+|.+...   .....+.+..|..++..++| ++|+.+.+++...+..+++||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            456688999999999999753 5678999998754   22344567889999988866 458888889988899999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        82 ~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  126 (324)
T cd05587          82 YVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRD  126 (324)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            99999999998543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.79  E-value=1.6e-18  Score=139.16  Aligned_cols=126  Identities=31%  Similarity=0.486  Sum_probs=106.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      .+..+.+.+.||+|+||.||++..      .++..+++|.+..........+.+|+.++++++||||+++.+.+...+..
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            345566778899999999999963      12356889988765555567899999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDEN-----------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++++|.+++....           ...+++.....++.|++.||+|||+++++||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~d  145 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRD  145 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            99999999999999985321           23489999999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.79  E-value=1.3e-18  Score=139.81  Aligned_cols=129  Identities=30%  Similarity=0.484  Sum_probs=107.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      .++...++.+.+.||+|+||.||++...      ....+++|.+... .......+.+|+.++..+ +|+||+++++.+.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            3455566777889999999999999652      2357899988754 334445788999999999 8999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhc--------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYD--------------ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~--------------~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+..+++|||+++|+|.+++..              .....+++..++.++.|++.||+|||+++|+||+
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~d  157 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRD  157 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            98999999999999999999853              1234588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.79  E-value=1.6e-18  Score=141.15  Aligned_cols=116  Identities=27%  Similarity=0.345  Sum_probs=99.3

Q ss_pred             hccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++... ++..+|+|.+...   .......+..|..++..+ +||||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            35899999999999754 5678999999754   223345667888888777 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++.++..++.|++.||+|||+++++||+
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d  121 (318)
T cd05570          81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRD  121 (318)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence            9999888543  4689999999999999999999999999995

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PHA02988 hypothetical protein; Provisional

Probab=99.79  E-value=1.5e-18  Score=139.05  Aligned_cols=115  Identities=19%  Similarity=0.301  Sum_probs=99.6

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhc---HHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEEEEcc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVYVFM  190 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~  190 (235)
                      ..|++|+++.||+|.+ ++..||+|.+.......   .+.|.+|+.++.+++||||++++|++.+    ....+++|||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5699999999999998 78899999987543222   4678899999999999999999999876    35688999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      ++|+|.+++...  ..+++.....++.|++.||.|||+ .+++||+
T Consensus       105 ~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrd  148 (283)
T PHA02988        105 TRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKN  148 (283)
T ss_pred             CCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence            999999999643  468899999999999999999998 4999995

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.79  E-value=1e-18  Score=142.61  Aligned_cols=120  Identities=24%  Similarity=0.292  Sum_probs=100.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +++.+.||+|+||.||++.. .++..+|+|.+...   .....+.+..|..++..+. |++|+.+.+++.+.+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            34567899999999999965 46789999998754   2233446778888888774 5778889999998899999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++.++..++.||+.||+|||++|++||+
T Consensus        82 y~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrD  126 (323)
T cd05615          82 YVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRD  126 (323)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99999999998543  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.79  E-value=1.8e-18  Score=138.31  Aligned_cols=124  Identities=30%  Similarity=0.561  Sum_probs=104.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC------CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST------GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      .++.+.+.||+|+||.||++....      ...+++|.+... .......|.+|+..+..++||||+++++.+.+....+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            355677889999999999996522      247899988654 3344567899999999999999999999999888999


Q ss_pred             EEEEcccCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENY--------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++|+|.+++.....              ..+++.....++.|++.||+|||+++++||+
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~d  149 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRD  149 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999999999854311              4578888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.79  E-value=3.5e-18  Score=137.40  Aligned_cols=123  Identities=27%  Similarity=0.378  Sum_probs=108.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..|++.+.||+|+||.||++... ++..+++|.+........+.+..|+..++.++|||++++.+.+..++..+++|||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            44667788999999999999753 57899999997766666778899999999999999999999999889999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|..++.+.. ..+++..+..++.|++.||+|||+++++||+
T Consensus        92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  135 (292)
T cd06644          92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRD  135 (292)
T ss_pred             CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence            9999988875433 4589999999999999999999999999985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.79  E-value=1.5e-18  Score=138.45  Aligned_cols=127  Identities=23%  Similarity=0.402  Sum_probs=105.1

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG  181 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  181 (235)
                      +...++.+.+.||+|+||.||++...      .+..+++|.+... ......++.+|+.+++.++||||+++++.+....
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34556777889999999999998642      2457999988643 3334557889999999999999999999999888


Q ss_pred             EEEEEEEcccCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDEN--------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++|||+++|+|.+++....        ...+++.....++.|++.||+|||+.+++||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~d  144 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRD  144 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999999999999999985421        12367788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.79  E-value=2.9e-18  Score=135.12  Aligned_cols=122  Identities=15%  Similarity=0.246  Sum_probs=106.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |++.+.||.|+||.|+.+.. .++..+++|.+...  .......+.+|+.++++++|+||+++++.+...+..++++||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            45568899999999998853 46788999988654  3445567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++.++..++.|++.||+|||+.+++||+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (256)
T cd08221          82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD  126 (256)
T ss_pred             CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            999999999655445689999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.2e-18  Score=147.21  Aligned_cols=125  Identities=24%  Similarity=0.340  Sum_probs=105.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  182 (235)
                      .+....+.+.++||+|+||+|++++. .++..+|||.++++   ...+.+....|-+++... +||.+++++.++.+.+.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            34445567789999999999999975 45779999999876   445556677787776666 69999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.||||+.|||+....   ....|++..+..||..|+.||+|||++|||+|+
T Consensus       444 l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRD  493 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRD  493 (694)
T ss_pred             EEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeee
Confidence            99999999999954443   335699999999999999999999999999996

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.79  E-value=2.4e-18  Score=136.32  Aligned_cols=120  Identities=29%  Similarity=0.481  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC------hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      |...+.||+|+||.||++...++..+++|.+....      ......+.+|+..++.++|+||+++.+.+.+.+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            45678899999999999987788899999886431      122346889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.+.  ..+++.....++.|++.||+|||+.+++|++
T Consensus        82 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  127 (265)
T cd06631          82 EFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRD  127 (265)
T ss_pred             ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999543  4578899999999999999999999999984

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.79  E-value=1.1e-18  Score=143.13  Aligned_cols=128  Identities=31%  Similarity=0.497  Sum_probs=104.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      +++..++.+.+.||+|+||.||++..      .+++.||+|.++.. .....+.+..|+.++..+ +|+||+++++.+..
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~   82 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK   82 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence            44556788889999999999999853      23468999998754 233445678899999999 89999999998854


Q ss_pred             -CCEEEEEEEcccCCChhhhhhcCC-------------------------------------------------------
Q 026630          180 -KGQHMLVYVFMSKGSLASHLYDEN-------------------------------------------------------  203 (235)
Q Consensus       180 -~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------------------------  203 (235)
                       ....++++||+++++|.+++....                                                       
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence             457889999999999999885321                                                       


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          204 ----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       204 ----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                          ...+++..+..++.||+.||+|||+++|+||+
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrD  198 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRD  198 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence                12578899999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.78  E-value=2.5e-18  Score=139.38  Aligned_cols=120  Identities=23%  Similarity=0.274  Sum_probs=103.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +++.+.||+|+||.||++.. .++..+++|.+... .......+.+|++++..++||||+++++.+...+..++++||++
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~   82 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD   82 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence            45567899999999999964 35678888888654 33344568899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++|.+++...  ..+++.....++.|++.||+|||+ ++++||+
T Consensus        83 ~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d  125 (308)
T cd06615          83 GGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRD  125 (308)
T ss_pred             CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECC
Confidence            99999999543  568899999999999999999997 6899985

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.78  E-value=2.8e-18  Score=135.15  Aligned_cols=120  Identities=29%  Similarity=0.437  Sum_probs=104.2

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-----hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      |...+.||+|+||.||++... ++..+++|.+....     ....+.+.+|+.+++.++|+|++++.+.+.+....++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            345678999999999999764 68899999986542     234467889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++...  ..+++.....++.|++.||+|||+.+++|++
T Consensus        82 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  127 (258)
T cd06632          82 ELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRD  127 (258)
T ss_pred             EecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999999999543  4588999999999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.78  E-value=2.2e-18  Score=140.03  Aligned_cols=129  Identities=28%  Similarity=0.477  Sum_probs=107.2

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGY  176 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~  176 (235)
                      .++...++.+.+.||+|+||.||++...        ....+++|.+... .......+..|+..++.+ +||||+++++.
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            3555667778899999999999998631        2346889988754 334456788999999999 69999999999


Q ss_pred             EEeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +...+..++++||+++|+|.+++....              ...+++.+...++.||+.||+|||++|++||+
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~d  159 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRD  159 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            998889999999999999999995421              13478889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.78  E-value=3.8e-18  Score=135.27  Aligned_cols=123  Identities=19%  Similarity=0.259  Sum_probs=104.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+.+.+.||+|+||.||++.. .++..+++|.+...   +......+.+|+.+++.++|||++++++.+.+.+..++++|
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence            345678899999999999964 46789999987642   33445578899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++..  .....++......++.|++.||+|||+++++||+
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  131 (267)
T cd08228          83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRD  131 (267)
T ss_pred             ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            9999999988843  2234578889999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.78  E-value=2.3e-18  Score=140.16  Aligned_cols=116  Identities=26%  Similarity=0.349  Sum_probs=97.7

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. .++..+|+|.+....   ......+..|..++... +||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            3589999999999975 357899999997541   22334566777777654 899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|..++...  ..+++.++..++.|++.||+|||++||+||+
T Consensus        81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD  121 (316)
T cd05620          81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRD  121 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            9999988543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.78  E-value=2e-18  Score=141.37  Aligned_cols=120  Identities=23%  Similarity=0.279  Sum_probs=102.2

Q ss_pred             hhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecC----ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATD----SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  184 (235)
                      |.+.+.||+|+||.||++..    .++..+|+|.+...    .....+.+..|+.++..+ +||||+.+.+.+...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            45668899999999999864    35789999998643    222344678899999999 6999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        82 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD  130 (332)
T cd05614          82 LILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRD  130 (332)
T ss_pred             EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence            999999999999998543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.78  E-value=1.4e-18  Score=142.46  Aligned_cols=119  Identities=24%  Similarity=0.331  Sum_probs=99.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      |.+.+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++.+++...     ...++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            45678899999999999964 46889999998643  223345688999999999999999999987543     24799


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+. ++|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        82 v~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  128 (338)
T cd07859          82 VFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRD  128 (338)
T ss_pred             EEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999995 6999988543  4589999999999999999999999999996

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.78  E-value=1.8e-18  Score=141.73  Aligned_cols=121  Identities=18%  Similarity=0.199  Sum_probs=103.1

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++... .+..+|+|.+...   .......+..|..++..++|+||+.+.+.+.+.+..++||||
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey   82 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDY   82 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEec
Confidence            456688999999999999754 4678999998643   222334578889999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        83 ~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrD  127 (332)
T cd05623          83 YVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRD  127 (332)
T ss_pred             cCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            9999999999642 24588999999999999999999999999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.78  E-value=1.8e-18  Score=138.71  Aligned_cols=120  Identities=20%  Similarity=0.270  Sum_probs=101.4

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.+++.++||||+++.+.+...+..+++|||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            456788999999999999764 5778999998754  2333457889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.+..+..  ....+++..+..++.|++.||+|||+++++||+
T Consensus        83 ~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  125 (287)
T cd07848          83 EKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD  125 (287)
T ss_pred             CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9876665542  234588999999999999999999999999995

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.78  E-value=3.4e-18  Score=134.61  Aligned_cols=122  Identities=21%  Similarity=0.280  Sum_probs=106.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |++.+.||+|+||.||++.. .++..+++|.+...  .......+..|+.+++.++|||++++++.+...+..++++||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            44567899999999999864 46788999998754  3334567899999999999999999999999889999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  126 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRD  126 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999999664445689999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.78  E-value=1.7e-18  Score=137.98  Aligned_cols=128  Identities=27%  Similarity=0.437  Sum_probs=107.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++...++.+.+.||+|+||.||++...      .+..+++|.+... .......+.+|+.+++.++||||+++++.+...
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG   81 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence            345567777889999999999999653      2367999998654 334455788999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN--------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+++|||+++|+|.+++....        ...+++..+..++.|++.||.|||+++++||+
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  144 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRD  144 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            99999999999999999985421        22467889999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.78  E-value=3.7e-18  Score=136.72  Aligned_cols=125  Identities=24%  Similarity=0.305  Sum_probs=107.0

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +...++++.+.||+|+||.||++.. .++..+++|.+... .....+.+.+|+.++..++||||+++++.+...+..+++
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence            3445667788999999999999965 45788999988654 334456789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +||+++++|.+++..  .+.+++.....++.|++.||.|||+ ++++||+
T Consensus        82 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d  129 (284)
T cd06620          82 MEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD  129 (284)
T ss_pred             EecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence            999999999998854  3468999999999999999999996 6899985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.78  E-value=2.7e-18  Score=137.26  Aligned_cols=125  Identities=31%  Similarity=0.467  Sum_probs=106.2

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..++.+.+.||+|+||.||++..      .++..+++|.+..........+.+|+..++.++|+||+++++.+......+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            34556678899999999999953      234578899887666666678999999999999999999999999888999


Q ss_pred             EEEEcccCCChhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENY-------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++++|.+++.....             ..+++..+..++.|++.|++|||+++++||+
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~d  147 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRD  147 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            99999999999999864321             2478899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.78  E-value=2.3e-18  Score=136.55  Aligned_cols=120  Identities=26%  Similarity=0.409  Sum_probs=103.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC------hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      |...+.||+|+||.||++.. .++..+++|.+....      ....+.+..|+..++.++|+||+++++.+.+.+..+++
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            34567899999999999964 567899999986432      12345788999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++++|.+++.+.  .++++.....++.|++.||.|||++|++||+
T Consensus        82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~  128 (268)
T cd06630          82 VEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRD  128 (268)
T ss_pred             EeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999998543  4688999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.78  E-value=2.1e-18  Score=137.65  Aligned_cols=124  Identities=31%  Similarity=0.484  Sum_probs=104.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+.+.+.||+|+||.||++...      .+..+++|.+... .......|..|+.+++.++|+||+++++.+...+..+
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            44566788999999999999763      3567899988654 3334457899999999999999999999998888899


Q ss_pred             EEEEcccCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDEN-----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++++|.+++....     ...+++..++.++.||+.||+|||+++++||+
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~d  141 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRD  141 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            9999999999999985432     12588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.78  E-value=3.5e-18  Score=135.78  Aligned_cols=117  Identities=28%  Similarity=0.360  Sum_probs=96.4

Q ss_pred             ccCCCCceeEEEEEeCCC---CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          119 LIGQGAFGPVYKAQMSTG---ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .||+|+||.||++...++   ..+++|.+... .....+.|.+|+..++.++||||+++++.+.+....+++|||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            489999999999964333   34567766544 33445689999999999999999999999999899999999999999


Q ss_pred             hhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |.+++....  ...++......++.||+.||+|||+++++||+
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d  124 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSD  124 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            999996532  23456667789999999999999999999995

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.78  E-value=3.4e-18  Score=134.80  Aligned_cols=117  Identities=30%  Similarity=0.426  Sum_probs=101.5

Q ss_pred             hccCCCCceeEEEEEeCC--C--CEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMST--G--ETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|++|.||++.+..  +  ..+++|.+..... ...+.+..|+..+++++||||+++++.+.+ ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            358999999999997532  2  3689999977654 566789999999999999999999999888 889999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.+.....+++.....++.|++.||+|||+++++||+
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  122 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRD  122 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            9999999654324689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.78  E-value=1.9e-18  Score=139.20  Aligned_cols=126  Identities=24%  Similarity=0.439  Sum_probs=104.8

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC-----------------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCcc
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS-----------------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLV  171 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~-----------------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv  171 (235)
                      +..++.+.+.||+|+||.||++...                 ++..+++|.+... ......++.+|+..++.++|+||+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            4456778889999999999998532                 2346899988754 334456789999999999999999


Q ss_pred             ceeeEEEeCCEEEEEEEcccCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN---------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       172 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++.+...+..+++|||+++|+|.+++....         ...+++.+...++.|++.||+|||+++++||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d  155 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD  155 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            99999999899999999999999999985422         12367788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.78  E-value=2.6e-18  Score=137.27  Aligned_cols=126  Identities=25%  Similarity=0.405  Sum_probs=105.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC-----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST-----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQ  182 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~  182 (235)
                      ...++.+.+.||+|+||.||+|....     +..+++|.+... .......+.+|+..++.++|||++++++.+.. ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34566677899999999999997644     678999988654 34445678899999999999999999998765 567


Q ss_pred             EEEEEEcccCCChhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENY------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++|+|.+++.....      ..+++..+..++.|++.||+|||+++++||+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~d  142 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKD  142 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            8899999999999999864321      4588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.78  E-value=4e-18  Score=135.10  Aligned_cols=123  Identities=20%  Similarity=0.271  Sum_probs=105.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+.+.+.||+|+||.||++.. .++..+++|.+...   +.....++.+|+.+++.++||||+++++.+...+..++++|
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            355678899999999999974 57889999988643   33345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++..  .....+++.....++.||+.||+|||+++++|++
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  131 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRD  131 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999999998853  2234588999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.78  E-value=3.4e-18  Score=136.40  Aligned_cols=120  Identities=25%  Similarity=0.396  Sum_probs=103.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+...+.||+|.||.||+|.. .++..+++|.+... .....+.+.+|+..++.++||||+++.+.+...+..++++||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            345567799999999999964 45778999998744 3344567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++..   ..+++..+..++.|++.|+.|||+++++|++
T Consensus        85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~d  126 (277)
T cd06642          85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRD  126 (277)
T ss_pred             CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccC
Confidence            99999998843   4588999999999999999999999999984

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=3.1e-18  Score=137.15  Aligned_cols=121  Identities=27%  Similarity=0.442  Sum_probs=102.5

Q ss_pred             hhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  185 (235)
                      +.+.+.||+|+||.||.+.+     ..+..+++|.+... .......+.+|+.+++.++|||++++.+.+...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            45567899999999999964     34678999998654 344456789999999999999999999988764  56889


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++++|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus        86 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~d  134 (284)
T cd05079          86 IMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRD  134 (284)
T ss_pred             EEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999999999998543 23589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=3.6e-19  Score=150.90  Aligned_cols=116  Identities=28%  Similarity=0.481  Sum_probs=104.3

Q ss_pred             ccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChhh
Q 026630          119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS  197 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~  197 (235)
                      +||+|.||.||.|+. .+...+|||.++..+....+.+..|+.+-+.++|.|||+++|.+..+++.-+.||-+|||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            699999999999975 3456889999988877777889999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          198 HLYDENYGPL--TWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       198 ~l~~~~~~~~--~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+. ..+++  ++...-.+.+||++||.|||++.||||+
T Consensus       662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRD  700 (1226)
T KOG4279|consen  662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRD  700 (1226)
T ss_pred             HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeecc
Confidence            9964 45666  6777889999999999999999999996

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.78  E-value=4.3e-18  Score=137.30  Aligned_cols=121  Identities=21%  Similarity=0.303  Sum_probs=106.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+|.+.+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|||++++++.+...+..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            4556678899999999999964 578899999997655555567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++..   ..+++.++..++.|++.||.|||+.+++||+
T Consensus        99 ~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d  140 (297)
T cd06656          99 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRD  140 (297)
T ss_pred             CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999843   3478899999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.78  E-value=2.4e-18  Score=138.30  Aligned_cols=125  Identities=30%  Similarity=0.486  Sum_probs=105.9

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..++.+.+.||+|+||.||++...      +...+++|.+........+.+.+|+..++.++||||+++.+.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            345566788999999999999632      34468888886655555678999999999999999999999999989999


Q ss_pred             EEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++++|.+++....              ...+++..++.++.||+.||+|||+++++||+
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  148 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD  148 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999999999999985421              23478899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.78  E-value=2.5e-18  Score=137.32  Aligned_cols=123  Identities=27%  Similarity=0.476  Sum_probs=103.6

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..++.+.+.||+|+||.||++... ++.    .+++|.+.... ......+.+|+..++.++|||++++++.+.. ...+
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            345567789999999999999753 232    58899876553 3445678899999999999999999999887 6789


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++|+|.+++.... ..+++.....++.||+.||+|||+++++||+
T Consensus        85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d  134 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRD  134 (279)
T ss_pred             EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecc
Confidence            9999999999999996533 4589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.78  E-value=5.8e-19  Score=152.72  Aligned_cols=123  Identities=20%  Similarity=0.277  Sum_probs=106.1

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCC-CEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeE-EEe------CCEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTG-ETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY-CAE------KGQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~------~~~~  183 (235)
                      ..++.+.|.+|+|+.||++....+ ..+|+|.+-..+....+...+|+.+|+.| .|+|||.+++. ...      ..+.
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev  117 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV  117 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence            345678899999999999987555 89999998877888888999999999999 59999999993 221      1367


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      +|+||||.+|.|-+++...-...|++.++++|+.|+++|+++||...  |||||
T Consensus       118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRD  171 (738)
T KOG1989|consen  118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRD  171 (738)
T ss_pred             EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhh
Confidence            89999999999999996544445999999999999999999999999  99997

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.78  E-value=2.7e-18  Score=153.47  Aligned_cols=123  Identities=22%  Similarity=0.273  Sum_probs=103.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.++..   .....+.|.+|+.+++.++||||+++++.+.+.+..+++||
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME   82 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP   82 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence            355678899999999999965 45789999998754   22335578999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDE---------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~---------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...         ....+++...+.++.||+.||+|||++||+||+
T Consensus        83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRD  138 (932)
T PRK13184         83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRD  138 (932)
T ss_pred             cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99999999988531         112356677899999999999999999999996

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.78  E-value=2.9e-18  Score=137.98  Aligned_cols=125  Identities=29%  Similarity=0.455  Sum_probs=105.6

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeCC-----------------CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMST-----------------GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN  172 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~  172 (235)
                      ..++.+.+.||+|+||.||++....                 +..+++|.+... .....+.+.+|+.++..++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4566778899999999999986421                 245899998755 3445567899999999999999999


Q ss_pred             eeeEEEeCCEEEEEEEcccCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDEN---------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       173 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.+...+..++++||+++++|.+++....         ...+++..+..++.|++.||+|||+++++||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d  155 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD  155 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            9999998889999999999999999985432         12588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.78  E-value=2.4e-18  Score=140.42  Aligned_cols=120  Identities=24%  Similarity=0.278  Sum_probs=100.1

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +.+.+.||+|+||.||++... ++..+|+|.+....   ......+..|..++..+ +|++|+.+.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            345678999999999999653 56799999987542   22334566777777776 68999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        82 ~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  126 (323)
T cd05616          82 YVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRD  126 (323)
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecC
Confidence            99999999988543  4588999999999999999999999999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.78  E-value=3.8e-18  Score=138.33  Aligned_cols=120  Identities=23%  Similarity=0.287  Sum_probs=101.6

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++... ++..+|+|.+... .......+.+|+.+++.++||||+++++.+...+..+++|||++
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   87 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD   87 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence            455678999999999999653 5778999998754 22333467889999999999999999999999999999999997


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        88 ~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d  129 (309)
T cd07872          88 K-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD  129 (309)
T ss_pred             C-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            5 888888543 24578889999999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.78  E-value=2.4e-18  Score=137.98  Aligned_cols=125  Identities=33%  Similarity=0.511  Sum_probs=104.8

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ..++.+.+.||+|+||.||++...      ++..+++|.+... .......+.+|+.+++.++||||+++++.+...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            344566788999999999999752      4568999998755 334456789999999999999999999999988899


Q ss_pred             EEEEEcccCCChhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDEN--------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~--------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++|+|.+++....                    ...+++..++.++.|++.||+|||+++++||+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~d  155 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRD  155 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999999999995321                    12467888999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.78  E-value=4.8e-18  Score=134.87  Aligned_cols=117  Identities=29%  Similarity=0.451  Sum_probs=102.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      ..||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|+||+++++.+...+..++++||+++++|.
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   93 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS   93 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence            4699999999999974 456789999987665556678999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          197 SHLYDENYGPL--TWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       197 ~~l~~~~~~~~--~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.... ..+  ++..+..++.||+.||+|||+++|+||+
T Consensus        94 ~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~d  133 (268)
T cd06624          94 ALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRD  133 (268)
T ss_pred             HHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            9996432 334  7788899999999999999999999985

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.78  E-value=3.4e-18  Score=137.35  Aligned_cols=120  Identities=28%  Similarity=0.364  Sum_probs=104.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++.. .+++.+++|.+...   .......+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY   82 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence            45668899999999999965 35789999998654   223455788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..++...+..++.|++.||.|||+++++||+
T Consensus        83 ~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~d  126 (290)
T cd05580          83 VPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRD  126 (290)
T ss_pred             CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            9999999998543  5689999999999999999999999999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.78  E-value=4e-18  Score=134.66  Aligned_cols=114  Identities=28%  Similarity=0.400  Sum_probs=96.9

Q ss_pred             cCCCCceeEEEEEeC---CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQMS---TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||+|+||.||+|.+.   .+..+++|.+... .....+.+.+|+.+++.++||||+++++.+.. +..+++|||+++++|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence            899999999999653   3456899998655 33345678999999999999999999998864 467899999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  120 (257)
T cd05115          82 NKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRD  120 (257)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence            9998543 35689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.77  E-value=4.6e-18  Score=137.07  Aligned_cols=120  Identities=22%  Similarity=0.310  Sum_probs=105.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++|||++++.+.+......++++||++
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~  100 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccC
Confidence            445567899999999999964 4678999999876655555678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++..   ..+++.+...++.|++.||+|||+++++||+
T Consensus       101 ~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d  141 (296)
T cd06654         101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (296)
T ss_pred             CCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999999843   3478999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.77  E-value=4.6e-18  Score=138.86  Aligned_cols=116  Identities=29%  Similarity=0.305  Sum_probs=95.5

Q ss_pred             hccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHH-HHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++... ++..+|+|.+....   ......+..|.. +++.++||||+++.+.+...+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            35899999999999753 56789999987531   222234445544 56778999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..++......++.||+.||+|||++||+||+
T Consensus        81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrD  121 (325)
T cd05602          81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRD  121 (325)
T ss_pred             CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            9999998543  4578888889999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.77  E-value=4.8e-18  Score=133.83  Aligned_cols=122  Identities=20%  Similarity=0.264  Sum_probs=105.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.+|.+.. .++..+++|.+...  ......++.+|+.+++.++||||+++.+.+...+..++++||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            45567899999999999964 46789999998643  3344567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++.+.+.++.|++.||+|||+++++|++
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~  126 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRD  126 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            999999998654444678999999999999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.77  E-value=5.9e-18  Score=134.02  Aligned_cols=122  Identities=21%  Similarity=0.280  Sum_probs=105.5

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      |.+.+.||+|+||.||++... ++..+++|.++..   +....+.+.+|+.++++++|+|++++++.+...+..+++|||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            456788999999999999764 7889999988642   333456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|..++..  .....+++.++..++.|++.||+|||+.|++||+
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  131 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRD  131 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            999999998853  2234588999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.77  E-value=4e-18  Score=137.87  Aligned_cols=123  Identities=33%  Similarity=0.566  Sum_probs=101.5

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCC--EEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGE--TVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+.+.+.||+|+||.||++... ++.  .+++|.+... .......+.+|+.++.++ +||||+++++.+...+..++++
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~   87 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI   87 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEE
Confidence            4456788999999999999753 343  4577776543 333445788999999999 8999999999999999999999


Q ss_pred             EcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++....              ...+++.+++.++.|++.||+|||++|++||+
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~d  149 (303)
T cd05088          88 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  149 (303)
T ss_pred             EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            9999999999986431              13578899999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.77  E-value=5e-18  Score=135.78  Aligned_cols=124  Identities=28%  Similarity=0.431  Sum_probs=103.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+.+.+.||+|+||.||+|...      .+..+++|.+.... ......+..|+.++..++||||+++++.+......+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            44567788999999999999642      24679999987543 233456889999999999999999999999988999


Q ss_pred             EEEEcccCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDE--------------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++++|.+++...              ....+++..+..++.|++.||+|||++|++||+
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~d  149 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKD  149 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            999999999999998421              123478888999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.77  E-value=4.9e-18  Score=134.60  Aligned_cols=120  Identities=29%  Similarity=0.416  Sum_probs=102.8

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK---------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      |.+.+.||+|+||.||++.. ..+..+++|.+.....         ...+.+.+|+.+++.++||||+++++.+...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            45678899999999999965 4578899998864321         1224688999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++++|.+++...  ..+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d  131 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRD  131 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            9999999999999999543  5688889999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.77  E-value=3.1e-18  Score=136.07  Aligned_cols=124  Identities=23%  Similarity=0.330  Sum_probs=103.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ...++.+.+.||+|+||.||+|...+    ...+++|...... ....+.+.+|+.+++.++||||+++++.+.+. ..+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcE
Confidence            34556777899999999999997532    2468899886553 45556899999999999999999999988764 567


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++.... ..+++..+..++.|++.||+|||+++++||+
T Consensus        83 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~d  132 (270)
T cd05056          83 IVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRD  132 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            9999999999999995432 3589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.77  E-value=4.4e-18  Score=137.13  Aligned_cols=120  Identities=30%  Similarity=0.365  Sum_probs=102.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChh-----cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ-----GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      +++.+.||+|+||.||+|.. .++..+++|.+......     ....+..|+.+++.++|+||+++++.+.+.+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            34567899999999999975 35789999999755322     2345678999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+ +|+|.+++.... ..+++..+..++.||+.||+|||+++++||+
T Consensus        82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d  127 (298)
T cd07841          82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRD  127 (298)
T ss_pred             ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            999 889999995433 3689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.77  E-value=1.2e-17  Score=132.69  Aligned_cols=123  Identities=29%  Similarity=0.463  Sum_probs=102.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeC------CEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEK------GQH  183 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~~~  183 (235)
                      ..+++.+.||+|+||.||++.. ..+..+++|.+.... .....+..|+.++..+ +|+|++++.+.+...      ...
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            3455667899999999999965 457889999986543 3345778899999888 799999999998653      467


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++++|.+++.......+++..+..++.|++.||+|||+++|+||+
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~d  136 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRD  136 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            8999999999999999764445689999999999999999999999999985

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=7.1e-18  Score=137.10  Aligned_cols=122  Identities=26%  Similarity=0.243  Sum_probs=106.2

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh---hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK---QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +++.+.||+|+||.||++... .+..+++|.+.....   ...+.+..|+.++..++||||+++++.+......++++||
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   82 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY   82 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence            445678999999999999754 578999999976532   2445788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+++|.+++.......+++.....++.|++.||+|||+.+++||+
T Consensus        83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  128 (316)
T cd05574          83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRD  128 (316)
T ss_pred             cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            9999999998655556789999999999999999999999999985

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.77  E-value=6.7e-18  Score=133.14  Aligned_cols=122  Identities=32%  Similarity=0.470  Sum_probs=103.9

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEE-eCCEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA-EKGQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~  189 (235)
                      ...+.+.+.||+|+||.||++.. .+..+++|......  ..+.+.+|+.+++.++|+|++++++.+. ..+..++++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            34566778899999999999977 57889999886432  3457889999999999999999999764 45678999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++.......+++..+..++.|++.||+|||++|++||+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  127 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRD  127 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            9999999999665445588999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.77  E-value=4.5e-18  Score=150.86  Aligned_cols=121  Identities=26%  Similarity=0.246  Sum_probs=104.7

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++... .+..||+|.++...   ......+..|+..++.++||||+++++.+...+..++|||
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmE   84 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVME   84 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEe
Confidence            3456788999999999999764 67899999997542   2334568889999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++...  ..+++..+..++.||+.||+|||+++||||+
T Consensus        85 y~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD  129 (669)
T cd05610          85 YLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRD  129 (669)
T ss_pred             CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            99999999999543  4588899999999999999999999999996

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.77  E-value=4.8e-18  Score=134.80  Aligned_cols=122  Identities=26%  Similarity=0.483  Sum_probs=104.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CC---CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TG---ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .++..+.||+|+||.||++... ++   ..+++|.+... .....+.+..|+.+++.++|||++++.+.+...+..+++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (268)
T cd05063           6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT   85 (268)
T ss_pred             HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence            4456688999999999999753 22   36899988654 3444567899999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.... ..+++.+...++.|++.|++|||+++++||+
T Consensus        86 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  132 (268)
T cd05063          86 EYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRD  132 (268)
T ss_pred             EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            9999999999985432 5689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.77  E-value=5.2e-18  Score=133.60  Aligned_cols=122  Identities=21%  Similarity=0.367  Sum_probs=105.2

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||+|+||.||++... ++..+++|.+...  .....+.+.+|+.+++.++|+|++++++.+...+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            345678999999999999653 5788999998654  2234457889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.......+++.....++.|++.||+|||+++++|++
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~d  126 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRD  126 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            999999999654444689999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.77  E-value=1.3e-17  Score=133.18  Aligned_cols=120  Identities=23%  Similarity=0.381  Sum_probs=103.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+...+.||+|+||.||++.. .++..+++|.+... .......+.+|+..+..++||||+++++.+...+..++++||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            345567899999999999965 46789999987644 2344567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++..   ..+++.....++.|++.|+.|||+++++|++
T Consensus        85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (277)
T cd06641          85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCC
Confidence            99999999843   3588999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.77  E-value=9.9e-18  Score=132.07  Aligned_cols=118  Identities=33%  Similarity=0.541  Sum_probs=103.1

Q ss_pred             hccCCCCceeEEEEEeCC----CCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMST----GETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+..|+..+..++|+|++++++++......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            368999999999997643    778999998765332 366889999999999999999999999998999999999999


Q ss_pred             CChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDEN-------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~-------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++....       ...+++.++..++.|++.||+|||+++++||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  130 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRD  130 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCc
Confidence            99999996531       35689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=8.7e-18  Score=132.69  Aligned_cols=122  Identities=29%  Similarity=0.420  Sum_probs=107.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|||++++++.+...+..+++|||++
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~   83 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG   83 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence            456678899999999999965 4567899999986655566788999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++... ...++..+...++.|++.||+|||+++++|++
T Consensus        84 ~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  126 (262)
T cd06613          84 GGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRD  126 (262)
T ss_pred             CCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence            99999988543 24689999999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.77  E-value=5.8e-18  Score=135.32  Aligned_cols=121  Identities=26%  Similarity=0.424  Sum_probs=98.5

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ++.+.+.||+|+||.||++.+. ++.    .+++|.+... ......++..|+..++.++||||+++++++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence            4456688999999999999753 343    4777777543 23334577888889999999999999998754 456789


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++... ...+++.....++.||+.||+|||+++++||+
T Consensus        87 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d  134 (279)
T cd05111          87 TQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRN  134 (279)
T ss_pred             EEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence            9999999999999643 34689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.77  E-value=8.3e-18  Score=133.65  Aligned_cols=121  Identities=26%  Similarity=0.468  Sum_probs=98.1

Q ss_pred             hhhhccCCCCceeEEEEEeCCCC---EEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMSTGE---TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQH  183 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~  183 (235)
                      .+.+.||+|+||.||+|......   .+++|.+...  .....+.+..|+.+++.++||||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            35678999999999999764332   5899988654  344456789999999999999999999987432      246


Q ss_pred             EEEEEcccCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDE----NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++|+|.+++...    ....+++.....++.|++.||+|||+++|+||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  137 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRD  137 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            8999999999999887421    234578999999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.77  E-value=1.8e-17  Score=132.28  Aligned_cols=120  Identities=22%  Similarity=0.362  Sum_probs=104.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .++..+.||+|+||.||++.. .++..+++|.+... .......+.+|+.+++.++||||+++.+.+.+.+..+++|||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            344567799999999999975 35788999998754 3344567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++..   .++++.+...++.|++.||+|||+++++|++
T Consensus        85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~d  126 (277)
T cd06640          85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcC
Confidence            99999999843   3588889999999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.77  E-value=5.8e-18  Score=133.33  Aligned_cols=120  Identities=33%  Similarity=0.509  Sum_probs=103.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ..+.+.+.||+|+||.||++.. .+..+++|.+....  ....+.+|+.++..++|||++++.+.+... ..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            4466778899999999999976 67889999986442  235788999999999999999999988654 4689999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++.......+++.....++.|++.|+.|||++|++||+
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~d  125 (254)
T cd05083          82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRD  125 (254)
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999665445688999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=3.5e-18  Score=142.86  Aligned_cols=116  Identities=22%  Similarity=0.199  Sum_probs=100.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...|.+.+.||+|+||.||++.. .+++.||+|...      ...+.+|+.+++.++||||+++++.+......++++|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            34567778999999999999964 567899999653      23467899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +. ++|..++...  ..+++.+++.++.||+.||+|||+++|+||+
T Consensus       165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD  207 (391)
T PHA03212        165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRD  207 (391)
T ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            95 6898888543  4588999999999999999999999999996

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.76  E-value=1.1e-17  Score=136.86  Aligned_cols=118  Identities=27%  Similarity=0.311  Sum_probs=100.9

Q ss_pred             hccCCC--CceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQG--AFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G--~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|  +|+.||++.. ..+..||+|.+...  .....+.+.+|+.+++.++||||+++++.+...+..++++||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  8999999965 47899999998654  233446788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrD  126 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRN  126 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999998654344588899999999999999999999999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.76  E-value=1e-17  Score=134.52  Aligned_cols=122  Identities=25%  Similarity=0.355  Sum_probs=96.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe--CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccC---CCCCccceeeEEEe-----C
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM--STGETVAVKVLATDS--KQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAE-----K  180 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~  180 (235)
                      +|.+.+.||+|+||.||++..  ..+..+|+|.+....  ......+.+|+..++.+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            355678899999999999975  246789999986542  22234556677666554   79999999998852     3


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...++++||++ ++|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d  135 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD  135 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            46889999996 5999998654445689999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.76  E-value=1.3e-17  Score=133.05  Aligned_cols=116  Identities=28%  Similarity=0.364  Sum_probs=100.2

Q ss_pred             cCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||+|+||.||++.. .++..+++|.+....   ......+..|+.+++.++|||++++.+.+...+..++++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999964 467899999986532   22344567899999999999999999999998999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++.......+++.++..++.|++.||.|||+++++||+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d  120 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD  120 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999655444689999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.76  E-value=7.2e-18  Score=135.40  Aligned_cols=121  Identities=26%  Similarity=0.357  Sum_probs=102.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+.+.+.||+|++|.||++... ++..+++|.+.... ......+.+|+.+++.++||||+++.+.+.+.+..++|+||+
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYL   85 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecC
Confidence            3455678999999999999754 67899999986542 222345678999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++ +|.+++.... ..+++.....++.|++.||.|||+++++||+
T Consensus        86 ~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~d  128 (291)
T cd07844          86 DT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRD  128 (291)
T ss_pred             CC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            85 9999885433 3688999999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.76  E-value=1e-17  Score=134.04  Aligned_cols=121  Identities=24%  Similarity=0.303  Sum_probs=102.5

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|++|.||++.. .++..+++|.+...  .......+.+|+.++..++|||++++.+.+.+++..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            34567899999999999975 46789999998644  2233457889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++.... ...+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  126 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRD  126 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            7 58988885432 25689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=1.3e-17  Score=133.18  Aligned_cols=116  Identities=26%  Similarity=0.332  Sum_probs=100.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +.+.+.||+|+||.||++.. .++..+++|.+..+ .......+.+|+.+++.++||||+++++.+...+..++++||++
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD   82 (279)
T ss_pred             chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence            45668899999999999964 56789999998755 33445578899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|..+.      .+++.....++.|++.||+|||+++++|++
T Consensus        83 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  120 (279)
T cd06619          83 GGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRD  120 (279)
T ss_pred             CCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence            99986543      367888899999999999999999999985

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.76  E-value=8.7e-18  Score=134.98  Aligned_cols=122  Identities=30%  Similarity=0.447  Sum_probs=101.3

Q ss_pred             hhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +.+.+.||+|+||.||+|...      ....+++|.+... .......+..|+..++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            345678999999999999642      2246888887654 333456788999999999999999999999998999999


Q ss_pred             EEcccCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDEN----------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++....                      ...+++...+.++.|++.||+|||+++++||+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~d  152 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRD  152 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhh
Confidence            99999999999875321                      13478889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.76  E-value=9.5e-18  Score=135.47  Aligned_cols=121  Identities=25%  Similarity=0.297  Sum_probs=102.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||++.. .++..|++|.+... .......+.+|+..++.++||||+++++.+...+..++++||+
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~   86 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL   86 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence            345668899999999999965 35789999998754 2333446788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++... ...+++..+..++.||+.||+|||+++++||+
T Consensus        87 ~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d  129 (301)
T cd07873          87 D-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD  129 (301)
T ss_pred             c-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            7 5998888543 34588999999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.76  E-value=8.4e-18  Score=134.28  Aligned_cols=124  Identities=26%  Similarity=0.413  Sum_probs=102.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...++++.+.||+|+||.||+|.+ .++.    .||+|.+... .......+.+|+..+..++||||+.+++.+... ..
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~   83 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV   83 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence            344556778899999999999974 3343    4899998654 344456788999999999999999999988654 46


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++|+|.+++... ...+++...+.++.||+.||+|||+++++||+
T Consensus        84 ~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~d  134 (279)
T cd05109          84 QLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRD  134 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            7999999999999998643 34689999999999999999999999999995

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.7e-18  Score=137.80  Aligned_cols=114  Identities=27%  Similarity=0.259  Sum_probs=94.4

Q ss_pred             cCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccC---CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          120 IGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       120 lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ||+|+||.||++.. .++..+|+|.+....   ......+..|..++...   +||||+.+.+.+...+..+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999964 468899999986431   12223445566665544   799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++..  ...+++..+..++.||+.||+|||+++|+||+
T Consensus        81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~ivHrD  121 (330)
T cd05586          81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYDIVYRD  121 (330)
T ss_pred             ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            999998854  35689999999999999999999999999996

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.76  E-value=6.8e-18  Score=134.20  Aligned_cols=120  Identities=30%  Similarity=0.396  Sum_probs=101.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC----------hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS----------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      |...+.||.|+||.||+|.. .++..+++|.+....          ....+.+..|+.+++.++|||++++++.+...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            34567899999999999964 467899999875321          0112467889999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++++|.+++...  ..+++..+..++.||+.||.|||+++++||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  133 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRD  133 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecC
Confidence            99999999999999999543  5688999999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.76  E-value=1.2e-17  Score=133.44  Aligned_cols=122  Identities=26%  Similarity=0.460  Sum_probs=103.9

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-----CCCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-----TGETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~  184 (235)
                      .+.+.+.||+|+||.||++.+.     .+..+++|.+...... ....|.+|+..++.++||||+++.+++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            3456688999999999999753     3578999998765332 45689999999999999999999998876  55789


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++++|.+++.... ..+++.....++.|++.||+|||++|++||+
T Consensus        85 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  134 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRD  134 (284)
T ss_pred             EEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999996432 3589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.76  E-value=1.1e-17  Score=132.17  Aligned_cols=120  Identities=30%  Similarity=0.369  Sum_probs=105.1

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh--hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK--QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+.....  ...+.+..|+.+++.++|+||+++++.+...+..++++||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            45567899999999999975 4678999999876533  35678899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++...  ..+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d  124 (264)
T cd06626          82 SGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRD  124 (264)
T ss_pred             CCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999998543  4478888999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=9.4e-18  Score=134.43  Aligned_cols=123  Identities=21%  Similarity=0.301  Sum_probs=105.4

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ++++.+.||+|+||.||++... .+..+++|.+... .......+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            3567788999999999999764 6789999988654 3344567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          191 SKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      ++++|..++.... ...+++..+..++.|++.||.|||+ .+++||+
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d  128 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRD  128 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCC
Confidence            9999999885431 2368999999999999999999996 6999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.76  E-value=8.6e-18  Score=135.32  Aligned_cols=121  Identities=23%  Similarity=0.319  Sum_probs=105.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .++.+.+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|||++++.+.+...+..++++||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            3556678899999999999964 467889999986554445567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++.+   ..+++..+..++.|++.||.|||+++++||+
T Consensus        99 ~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~d  140 (293)
T cd06647          99 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  140 (293)
T ss_pred             CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            99999999853   3478889999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.76  E-value=9.1e-18  Score=135.14  Aligned_cols=116  Identities=27%  Similarity=0.352  Sum_probs=102.2

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ...||+|+||.||++.. .++..+++|.+........+.+.+|+..++.++|||++++++.+...+..++++||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            45699999999999964 46789999998765555566788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++..   ..+++.+...++.||+.||+|||+++++||+
T Consensus       107 ~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d  143 (292)
T cd06658         107 TDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRD  143 (292)
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            998843   3488999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.2e-17  Score=132.67  Aligned_cols=121  Identities=30%  Similarity=0.474  Sum_probs=100.0

Q ss_pred             hhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE------
Q 026630          115 NFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ------  182 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------  182 (235)
                      .+.+.||+|+||.||++....    +..+|+|.+...  .......+.+|+..++.++||||+++++.+.....      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            456789999999999997532    367999998754  23345678999999999999999999998865443      


Q ss_pred             EEEEEEcccCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDE----NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++|+|..++...    ....+++.....++.|++.||+|||+++++||+
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~d  138 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRD  138 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            78999999999999988432    223588899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.76  E-value=1.2e-17  Score=131.68  Aligned_cols=121  Identities=29%  Similarity=0.483  Sum_probs=104.9

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      .+++.+.||+|+||.||++.+..+..+++|.+.... .....|..|+.+++.++|||++++++.+......++++||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            456678899999999999987667889999886442 2345788999999999999999999999988899999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++... ...+++..+..++.|++.|++|||+++++||+
T Consensus        84 ~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~d  125 (256)
T cd05112          84 GCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRD  125 (256)
T ss_pred             CcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            9999998543 24578999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.76  E-value=1.2e-17  Score=133.56  Aligned_cols=120  Identities=24%  Similarity=0.316  Sum_probs=102.5

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |++.+.||+|+||.||++... ++..+++|.+....  ....+.+.+|+.+++.++|||++++++.+......++++||+
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            455678999999999999764 57899999886442  233456789999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.|..++...  ..+++.++..++.|++.||+|||+++++||+
T Consensus        83 ~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d  125 (286)
T cd07847          83 DHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD  125 (286)
T ss_pred             CccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            998888776432  4589999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.76  E-value=7.6e-18  Score=140.07  Aligned_cols=118  Identities=24%  Similarity=0.297  Sum_probs=100.1

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-----EEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-----QHMLV  186 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv  186 (235)
                      .+.+.||+|+||.||++.. .++..+|+|.+...  +....+.+.+|+.+++.++||||+++++.+...+     ..+++
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence            4567899999999999974 46889999998643  2334457889999999999999999999987765     78999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+. ++|.+.+...  ..+++..+..++.||+.||+|||+++++||+
T Consensus        83 ~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~d  128 (372)
T cd07853          83 TELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRD  128 (372)
T ss_pred             eeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            99996 5888887433  4689999999999999999999999999996

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.76  E-value=5.7e-18  Score=133.65  Aligned_cols=120  Identities=27%  Similarity=0.300  Sum_probs=105.0

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||.|+||.||++... ++..+++|.+....   ....+.+.+|+..++.++||||+++++.+...+..++++||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            455688999999999999764 58899999997542   24456889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  .++++..+..++.|++.||.|||+++++|++
T Consensus        82 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~d  125 (258)
T cd05578          82 LLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRD  125 (258)
T ss_pred             CCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999999999543  5688999999999999999999999999985

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.3e-17  Score=131.75  Aligned_cols=120  Identities=30%  Similarity=0.452  Sum_probs=103.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-----hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      |...+.||+|++|.||.+.. .++..+++|.+....     ......+.+|+.+++.++||||+++++.+...+..++++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            45568899999999999964 467899999986432     123356889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++...  ..++......++.|++.||+|||+.+++||+
T Consensus        84 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  129 (263)
T cd06625          84 EYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRD  129 (263)
T ss_pred             EECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999999998543  4588889999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.76  E-value=1.3e-17  Score=133.52  Aligned_cols=118  Identities=30%  Similarity=0.443  Sum_probs=99.8

Q ss_pred             hhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLV  186 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv  186 (235)
                      .+.+.||+|+||.||++.+     .++..+++|.+.... ......|.+|+.+++.++||||+++.+.+...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            4567899999999988643     356789999987542 33456788999999999999999999987653  467899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++..   ..+++.++..++.|++.||+|||+++++||+
T Consensus        87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~d  132 (283)
T cd05080          87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRD  132 (283)
T ss_pred             ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            999999999999854   3489999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.76  E-value=4.6e-20  Score=138.74  Aligned_cols=122  Identities=23%  Similarity=0.326  Sum_probs=104.6

Q ss_pred             HHhhhhhccCCCCceeEEEE-EeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ..+.+-+.||+|.|+.|+++ ...+|+.+++|.+...  .....+++.+|+.+...++||||+++...+......++|+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            34556688999999999998 4567888898888644  33456788999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++.+++|..-+...  .-+++..+-.++.||+++|.|+|.++||||+
T Consensus        91 ~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRD  135 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRD  135 (355)
T ss_pred             cccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            99999998766433  3478888999999999999999999999996

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.76  E-value=1.2e-17  Score=131.56  Aligned_cols=120  Identities=25%  Similarity=0.375  Sum_probs=105.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.+.||+|+||.||++.... +..+++|.+.....  .+.+.+|+..++.++|||++++.+.+......++++||++
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            45667889999999999997644 78999999865432  5689999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++... ...+++.....++.|++.||.|||+.+++||+
T Consensus        82 ~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d  124 (256)
T cd06612          82 AGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD  124 (256)
T ss_pred             CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999998543 35689999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.76  E-value=1e-17  Score=135.09  Aligned_cols=122  Identities=31%  Similarity=0.533  Sum_probs=101.5

Q ss_pred             hhhhhccCCCCceeEEEEEeCC-C--CEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST-G--ETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +.+.+.||+|+||.||++...+ +  ..+++|.+... .....+.+.+|+.++.++ +||||+++++.+...+..++++|
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            4567889999999999997533 3  34788887643 334456789999999999 79999999999988888999999


Q ss_pred             cccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++....              ...+++..+..++.|++.||+|||+++++||+
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d  144 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRD  144 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCc
Confidence            999999999985421              13478889999999999999999999999995

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.76  E-value=1.2e-17  Score=131.83  Aligned_cols=114  Identities=27%  Similarity=0.407  Sum_probs=97.0

Q ss_pred             ccCCCCceeEEEEEe---CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          119 LIGQGAFGPVYKAQM---STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~---~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      .||+|+||.||+|.+   .++..+++|.+...  +....+.+..|+.+++.++||||+++++.+.. +..+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            489999999999964   35678999988644  23345678999999999999999999998754 4568999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++...  ..+++.....++.|++.||+|||++|++||+
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d  120 (257)
T cd05116          81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRD  120 (257)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            999999543  4589999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.76  E-value=1.3e-17  Score=131.32  Aligned_cols=121  Identities=34%  Similarity=0.533  Sum_probs=104.2

Q ss_pred             hhhhccCCCCceeEEEEEeCC-----CCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMST-----GETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.||.|+||.||++....     +..+++|.+...... ..+.+..|+..+..++|+||+++++.+...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            356789999999999997633     378999999765332 56688999999999999999999999999899999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.......+++.+...++.|++.||+|||+++++||+
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~d  128 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRD  128 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence            99999999999654322389999999999999999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.76  E-value=1.6e-17  Score=132.05  Aligned_cols=118  Identities=34%  Similarity=0.571  Sum_probs=98.7

Q ss_pred             hccCCCCceeEEEEEeCC-CC--EEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMST-GE--TVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++...+ +.  .+++|.+... .......+.+|+.++.++ +||||+++++.+...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            358999999999997643 33  4688887643 334456788999999999 899999999999998899999999999


Q ss_pred             CChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++....              ...+++.++..++.|++.||+|||+++++||+
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~d  137 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  137 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            99999985421              12478889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.76  E-value=1.5e-18  Score=135.13  Aligned_cols=125  Identities=25%  Similarity=0.425  Sum_probs=109.1

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEE-EeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  183 (235)
                      ..|+.+-+   .+.||+|+|+.|-.+ ...++..+|||++.+.....+....+|++++... .|+||++++.+|+++...
T Consensus        75 F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F  151 (463)
T KOG0607|consen   75 FEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF  151 (463)
T ss_pred             HHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence            44554433   477999999999887 4678999999999877666667888999998877 799999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|||-+.+|+|...+...  ..|++.++..+.++|+.||.|||++||.||+
T Consensus       152 YLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRD  201 (463)
T KOG0607|consen  152 YLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRD  201 (463)
T ss_pred             EEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCccccc
Confidence            9999999999999999544  5699999999999999999999999999996

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.76  E-value=4.6e-18  Score=134.94  Aligned_cols=117  Identities=35%  Similarity=0.501  Sum_probs=99.2

Q ss_pred             ccCCCCceeEEEEEeCC-------CCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          119 LIGQGAFGPVYKAQMST-------GETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .||+|+||.||++...+       +..+++|.+.... ......+.+|+..++.++||||+++++.+.+.+..++++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999997532       2578999876542 344567899999999999999999999999988999999999


Q ss_pred             cCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDEN-----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++....     ...+++.+++.++.|++.||+|||+++++|++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  131 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRD  131 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999999996421     23478899999999999999999999999985

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.75  E-value=1.7e-17  Score=132.75  Aligned_cols=120  Identities=28%  Similarity=0.331  Sum_probs=104.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.+++.++|||++++++.+......++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            45667899999999999975 467899999987553  334567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +++|.+++.... ..+++.++..++.||+.||+|||+++++|++
T Consensus        82 -~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  124 (286)
T cd07832          82 -PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRD  124 (286)
T ss_pred             -CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence             999999985433 5689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.75  E-value=1.4e-17  Score=131.18  Aligned_cols=122  Identities=26%  Similarity=0.360  Sum_probs=103.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~  189 (235)
                      |++.+.||+|++|.||.+.. .++..+++|.+...  .....+.+..|+.+++.++|+|++++.+.+.. ....++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            45678899999999999964 35678999998654  23445578899999999999999999988754 4568999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++.......+++.++..++.|++.|++|||++|++||+
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~d  127 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRD  127 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999999999765455689999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.75  E-value=1.5e-17  Score=130.59  Aligned_cols=117  Identities=32%  Similarity=0.488  Sum_probs=102.7

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      +.||+|+||.||++....+..+++|.+..... .....+..|+.+++.++|+||+++++.+.+....++++||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            35899999999999876689999999875533 34567899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++... ...+++.....++.|++.|++|||+++++||+
T Consensus        81 ~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d  118 (251)
T cd05041          81 TFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD  118 (251)
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence            998543 24578899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.75  E-value=1.7e-17  Score=133.82  Aligned_cols=116  Identities=23%  Similarity=0.298  Sum_probs=101.8

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ...||+|+||.||++.. .++..+++|.+........+.+.+|+..+..++|||++++++.+...+..++++||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            34699999999999965 36789999998765444556788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..++..   ..+++.++..++.|++.||+|||+++++||+
T Consensus       106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d  142 (297)
T cd06659         106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRD  142 (297)
T ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            988733   3588999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.75  E-value=2.6e-18  Score=135.43  Aligned_cols=119  Identities=30%  Similarity=0.468  Sum_probs=102.4

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHH--HHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEK--EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ++.+.||+|+||.||++... ++..+|+|.+.........  ...+|+..+..++||||+++.+.+......+++|||++
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence            45688999999999999764 4558999999876433322  34569999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++.  ....+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d  123 (260)
T PF00069_consen   82 GGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRD  123 (260)
T ss_dssp             TEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             ccccccccc--ccccccccccccccccccccccccccccccccc
Confidence            999999996  235589999999999999999999999999996

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.75  E-value=1.4e-17  Score=134.33  Aligned_cols=119  Identities=23%  Similarity=0.331  Sum_probs=104.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+.+.||.|.||.||++.. .+++.+++|.+........+.+.+|+..++.++|||++++++.+...+..++++||+++
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  100 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAG  100 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCC
Confidence            45567899999999999964 56889999998765544556788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|..++..   ..+++.++..++.|++.||+|||++|++||+
T Consensus       101 ~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d  140 (296)
T cd06655         101 GSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRD  140 (296)
T ss_pred             CcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999998843   3489999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.75  E-value=1.4e-17  Score=134.80  Aligned_cols=120  Identities=22%  Similarity=0.268  Sum_probs=103.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++.. ..+..+++|.+....   ......+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY   82 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence            34567899999999999964 456889999987542   23345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++.....++.|++.||+|||+++++||+
T Consensus        83 ~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  126 (305)
T cd05609          83 VEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRD  126 (305)
T ss_pred             CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999543  4588999999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.4e-17  Score=130.36  Aligned_cols=119  Identities=26%  Similarity=0.367  Sum_probs=104.3

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||.|+||.||++... ++..+++|.+.... ......+.+|+.+++.++|+|++++.+.+.+....++++||++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG   82 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence            456678999999999999753 57899999987552 3445678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++...   .+++.....++.|++.||.|||+++++||+
T Consensus        83 ~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d  123 (274)
T cd06609          83 GGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRD  123 (274)
T ss_pred             CCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999998543   689999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=3.7e-18  Score=140.54  Aligned_cols=122  Identities=22%  Similarity=0.279  Sum_probs=106.9

Q ss_pred             HhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      -|++.+.||+|.|..|-++. .-+|..||||.+.+.  +......+..|++.|+-++|||||+++.+......+|+|+|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            35667889999999998883 458999999999765  444456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      -++|||++|+-... ..+.+..+.+|+.||+.|+.|+|+..+|||+
T Consensus        99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRD  143 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRD  143 (864)
T ss_pred             cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence            99999999996543 4588999999999999999999999999996

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=4.7e-17  Score=136.25  Aligned_cols=121  Identities=21%  Similarity=0.256  Sum_probs=101.7

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC---CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS---TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ..+...+|.+.+.||+|+||.||++...   .+..+++|.+....     .+.+|+.+++.++||||+++++.+......
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTV  161 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence            3444556778899999999999998642   35678999875432     346899999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||++. ++|.+++.  ....+++.+++.++.||+.||+|||++||+||+
T Consensus       162 ~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrD  210 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRD  210 (392)
T ss_pred             EEEehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99999996 58988883  335689999999999999999999999999996

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.3e-18  Score=137.47  Aligned_cols=114  Identities=29%  Similarity=0.441  Sum_probs=91.8

Q ss_pred             hhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--C---EEEEEEEcc
Q 026630          117 TTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--G---QHMLVYVFM  190 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~---~~~lv~e~~  190 (235)
                      .+++|.|+||.||+|... ++..+|||..-.+...    -.+|+.+|+.++|||||++.-+|...  .   ...+||||+
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym  104 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM  104 (364)
T ss_pred             eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence            477999999999999753 4689999987654321    14789999999999999999887432  2   345899999


Q ss_pred             cCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |. +|..+++.  .....++...+.-+..||.+||+|||+.||+||+
T Consensus       105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRD  150 (364)
T KOG0658|consen  105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRD  150 (364)
T ss_pred             hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCC
Confidence            88 99988863  1234577777888999999999999999999997

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.75  E-value=2e-17  Score=131.08  Aligned_cols=120  Identities=29%  Similarity=0.435  Sum_probs=100.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-----hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  185 (235)
                      +.+.+.||+|+||.||.+.. .++..+++|.+....     ....+.+.+|+..+..++||||+++.+.+.+.  ...++
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence            44567899999999999965 457899999886331     22345788899999999999999999987653  46789


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++...  ..+++.....++.|++.||+|||+++++|++
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  131 (265)
T cd06652          84 FMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRD  131 (265)
T ss_pred             EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            99999999999998543  4578888999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.74  E-value=1.6e-17  Score=132.95  Aligned_cols=120  Identities=27%  Similarity=0.380  Sum_probs=103.0

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +..+.||.|++|.||++.. .++..+++|.+....  ......+..|+..+++++||||+++.+.+.+.+..+++|||++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence            4457799999999999965 467899999886542  2234578899999999999999999999999999999999996


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ++|..++.......+++.+...++.|++.||+|||+++++||+
T Consensus        83 -~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~  125 (284)
T cd07860          83 -QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  125 (284)
T ss_pred             -cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence             5899888665556789999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.74  E-value=3.4e-17  Score=129.61  Aligned_cols=122  Identities=27%  Similarity=0.361  Sum_probs=105.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +++.+.||.|+||.||++.. .++..+++|.+.... ......+.+|+..++.++|+|++++.+.+...+..++++|+++
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   82 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS   82 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence            45678899999999999974 457789999986542 3355678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENY-GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++..... ..+++.....++.|++.||+|||+++++||+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~  127 (267)
T cd06610          83 GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRD  127 (267)
T ss_pred             CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999965322 4589999999999999999999999999985

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.8e-17  Score=130.26  Aligned_cols=119  Identities=27%  Similarity=0.426  Sum_probs=102.8

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCC---CCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLH---HRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      |...+.||+|+||.||++.. .++..+++|.+... .......+.+|+.+++.++   |||++++.+.+......+++||
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            34567799999999999975 56789999998654 3344567888999888886   9999999999999899999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++..   ..+++.....++.|++.||.|||+.+++||+
T Consensus        83 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~d  126 (277)
T cd06917          83 YAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRD  126 (277)
T ss_pred             cCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999999999844   3588999999999999999999999999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.74  E-value=4.6e-17  Score=131.06  Aligned_cols=115  Identities=24%  Similarity=0.312  Sum_probs=101.6

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      ..||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++|+|++++++.+...+..+++|||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            5699999999999965 467899999886554445567899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++..   ..+++.....++.|++.||+|||++|++|++
T Consensus       106 ~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~d  141 (292)
T cd06657         106 DIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRD  141 (292)
T ss_pred             HHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            98743   3478999999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.74  E-value=3.6e-17  Score=129.72  Aligned_cols=120  Identities=28%  Similarity=0.429  Sum_probs=100.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-----hhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l  185 (235)
                      |...+.||+|+||.||++.. .++..+++|.+....     ......+.+|+.+++.++||||+++.+.+..  ....++
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence            44568899999999999964 468899999886431     2234568899999999999999999998865  357789


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++...  ..+++.....++.|++.||+|||+++++||+
T Consensus        84 ~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~  131 (266)
T cd06651          84 FMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRD  131 (266)
T ss_pred             EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            99999999999998543  4588899999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.74  E-value=1.1e-17  Score=133.85  Aligned_cols=120  Identities=28%  Similarity=0.354  Sum_probs=102.4

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||+|+||.||++... .+..+++|.+....  ....+.+.+|+.++..++||||+++++.+.+.+..++++||+
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (286)
T cd07846           3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFV   82 (286)
T ss_pred             eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecC
Confidence            445688999999999999764 57899999876432  223456889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|..+....  ..+++.+...++.||+.||+|||+.+++||+
T Consensus        83 ~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~  125 (286)
T cd07846          83 DHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRD  125 (286)
T ss_pred             CccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            998888776432  3489999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.74  E-value=1.4e-17  Score=149.57  Aligned_cols=129  Identities=19%  Similarity=0.309  Sum_probs=106.2

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CC
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KG  181 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~  181 (235)
                      .+.....|.+.+.||+|+||.||++.. ..+..+++|.+...  .......|..|+.++..++||||+++++.+..  ..
T Consensus         8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~   87 (1021)
T PTZ00266          8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ   87 (1021)
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence            344455677889999999999999965 45678899988643  33445678999999999999999999998854  45


Q ss_pred             EEEEEEEcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcC-------CccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDG-------VSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~-------~ivHr~  235 (235)
                      ..++||||+++|+|.++|...  ....+++..++.++.||+.||+|||+.       +||||+
T Consensus        88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRD  150 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRD  150 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceecc
Confidence            789999999999999998542  235689999999999999999999984       499996

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.74  E-value=4.6e-17  Score=128.84  Aligned_cols=121  Identities=26%  Similarity=0.361  Sum_probs=105.5

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +++.+.||.|+||.||++... ++..+++|.+... .......+.+|+..++.++||||+++++.+...+..++++||++
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD   82 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence            455678999999999999764 5788999998765 33445678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++|.+++.... ..++......++.|++.||+|||+ .+++||+
T Consensus        83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~d  126 (265)
T cd06605          83 GGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRD  126 (265)
T ss_pred             CCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCC
Confidence            999999996433 568899999999999999999999 9999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.74  E-value=3.8e-17  Score=129.15  Aligned_cols=117  Identities=28%  Similarity=0.462  Sum_probs=96.3

Q ss_pred             hccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEE-eCCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA-EKGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~  191 (235)
                      +.||+|+||.||+|...    ....+++|.+... .......+..|+.+++.++|||++++++.+. .++..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            35899999999999642    2347899987543 3445567889999999999999999999875 4556789999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.... ...++...+.++.|++.||+|||+++++||+
T Consensus        81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  123 (262)
T cd05058          81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRD  123 (262)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            999999995432 3467788899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.74  E-value=2.5e-17  Score=130.08  Aligned_cols=114  Identities=28%  Similarity=0.354  Sum_probs=100.4

Q ss_pred             cCCCCceeEEEEEeC-CCCEEEEEEeecCCh---hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK---QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||.|+||.||++... ++..+++|.+.....   .....+.+|+..++.++|||++++.+.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999765 488999999865432   3456788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++.+.  ..+++..+..++.|++.||+|||+++++||+
T Consensus        81 ~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d  118 (265)
T cd05579          81 ASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRD  118 (265)
T ss_pred             HHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence            9999543  3689999999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.1e-17  Score=146.53  Aligned_cols=130  Identities=30%  Similarity=0.460  Sum_probs=112.1

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceee
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVG  175 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~  175 (235)
                      .+++.+....+.+.||+|.||.|++|...        ....||||.++.. ...+.+++..|+.+|+.+ .|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            56777777777789999999999999632        1457999999765 446677899999999999 7999999999


Q ss_pred             EEEeCCEEEEEEEcccCCChhhhhhcCC------------C--CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          176 YCAEKGQHMLVYVFMSKGSLASHLYDEN------------Y--GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       176 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~--~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .|...++.++|+||+..|+|..||+..+            .  ..++..+.+.++.|||.||+||+++++|||+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD  443 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD  443 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence            9999999999999999999999997543            0  1388889999999999999999999999996

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.74  E-value=4.5e-17  Score=128.79  Aligned_cols=114  Identities=21%  Similarity=0.226  Sum_probs=99.8

Q ss_pred             cCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||.|+||.||++... ++..+++|.+....   ....+.+.+|+.+++.++||||+++++.+.+....++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999763 47899999987542   23446789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++...  ..++...+..++.|++.||+|||+++++|++
T Consensus        81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~d  118 (262)
T cd05572          81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRD  118 (262)
T ss_pred             HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            9999543  4588899999999999999999999999984

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.74  E-value=4.3e-17  Score=128.81  Aligned_cols=120  Identities=28%  Similarity=0.377  Sum_probs=105.8

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +.+.+.||+|++|.||++... ++..+++|.+..... .....+.+|+..+..++|+|++++++.+...+..++++||++
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD   82 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence            345678999999999999764 588999999876543 445689999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++|.+++...  ..+++.....++.|++.||+|||+ ++++||+
T Consensus        83 ~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~  125 (264)
T cd06623          83 GGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRD  125 (264)
T ss_pred             CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCC
Confidence            99999999543  568999999999999999999999 9999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=4.4e-17  Score=128.57  Aligned_cols=115  Identities=30%  Similarity=0.412  Sum_probs=97.5

Q ss_pred             hccCCCCceeEEEEEeCC----CCEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMST----GETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||+|.+..    +..+++|.+..... ...+.+..|+.+++.++|||++++++.+.. +..++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence            358999999999996422    26899999875533 345678999999999999999999998764 457899999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..+++..+..++.|++.||+|||+++++||+
T Consensus        80 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d  120 (257)
T cd05060          80 GPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRD  120 (257)
T ss_pred             CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccC
Confidence            9999999543  3689999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.74  E-value=6.8e-17  Score=129.55  Aligned_cols=116  Identities=25%  Similarity=0.314  Sum_probs=102.6

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .+.||+|++|.||++.. .++..+++|.+........+.+.+|+.+++.++|||++++++.+...+..++++||+++++|
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L  103 (285)
T cd06648          24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL  103 (285)
T ss_pred             ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence            46899999999999964 46789999988655444556788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++..   ..+++..+..++.|++.||+|||+++++||+
T Consensus       104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d  140 (285)
T cd06648         104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRD  140 (285)
T ss_pred             HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999854   4588899999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.74  E-value=7.7e-17  Score=129.16  Aligned_cols=120  Identities=26%  Similarity=0.338  Sum_probs=105.0

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+.+.||+|.+|.||++... .+..+++|.+..... ....+.+|+..++.++|+|++++++.+...+..++++||+++
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   99 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG   99 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence            344577999999999999764 578899999876543 456788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.... ..+++..+..++.|++.||+|||+.|++|+.
T Consensus       100 ~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~d  141 (286)
T cd06614         100 GSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRD  141 (286)
T ss_pred             CcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            99999996543 3689999999999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.74  E-value=4.2e-17  Score=130.44  Aligned_cols=121  Identities=26%  Similarity=0.394  Sum_probs=102.4

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||.|++|.||++... ++..+++|.+.... ......+.+|+.+++.++||||+++++.+.+.+..++++||++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            345678999999999999763 57889999987552 2334567789999999999999999999999999999999998


Q ss_pred             CCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++.... ...+++.++..++.|++.||+|||+++++||+
T Consensus        82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~d  125 (284)
T cd07836          82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRD  125 (284)
T ss_pred             c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            5 8888875432 24589999999999999999999999999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.74  E-value=5.9e-18  Score=122.07  Aligned_cols=117  Identities=28%  Similarity=0.375  Sum_probs=101.6

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      -++||+|.||+||+++ +.+++.||+|..+.+  +...-...++|+-+++.+.|.|||++++....+..+-+|+|||.. 
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-   85 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence            4679999999999995 567889999998755  333345678999999999999999999999888899999999976 


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|..|..+ ..+.++...+..++.|+++||.|+|++++.||+
T Consensus        86 dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshnvlhrd  126 (292)
T KOG0662|consen   86 DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRD  126 (292)
T ss_pred             HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence            99988844 456789999999999999999999999999996

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=8.2e-17  Score=133.19  Aligned_cols=116  Identities=21%  Similarity=0.254  Sum_probs=98.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..|.+.+.||+|+||.||++... .+..+++|.....      ....|+.+++.++||||+++++.+...+..++++|++
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            34667789999999999999753 4678999975432      2346889999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      . ++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       140 ~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  182 (357)
T PHA03209        140 S-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRD  182 (357)
T ss_pred             C-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            5 5898888543 35689999999999999999999999999996

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=4.4e-17  Score=138.41  Aligned_cols=115  Identities=21%  Similarity=0.194  Sum_probs=98.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.+.||+|+||.||++... .+..|++|....      ..+.+|+.++++++|+||+++++++...+..+++||++.
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            4566688999999999999753 467899996421      245689999999999999999999999999999999995


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ++|..++... ...+++.++..++.||+.||+|||++||+||+
T Consensus       244 -~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD  285 (461)
T PHA03211        244 -SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD  285 (461)
T ss_pred             -CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence             6998888543 24689999999999999999999999999996

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.73  E-value=5e-17  Score=131.97  Aligned_cols=119  Identities=24%  Similarity=0.186  Sum_probs=100.2

Q ss_pred             hhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.+.+|.|+++.++++.. ++..+|+|.+...  .......+..|+..++.++|+||+++++.+...+..+++|||+++|
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            344556666666666655 7889999998754  3445567899999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++.......+++.....++.|++.||+|||+++|+||+
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~d  126 (314)
T cd08216          85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRS  126 (314)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999999654445688889999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.73  E-value=5.1e-17  Score=130.72  Aligned_cols=121  Identities=25%  Similarity=0.323  Sum_probs=101.1

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||+|.+|.||++... ++..+++|.+....  ......+.+|+..++.++|||++++++.+.+.+..++++||+
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            455678999999999999753 67899999986442  233456889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++.......+++.....++.||+.||+|||+++++||+
T Consensus        84 ~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~d  127 (294)
T PLN00009         84 D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRD  127 (294)
T ss_pred             c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            6 5888887544334467888889999999999999999999985

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=5.8e-17  Score=130.04  Aligned_cols=122  Identities=25%  Similarity=0.275  Sum_probs=101.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~  189 (235)
                      +...+.||.|.+|.||++.. .++..+++|.+... .......+.+|++.++.++||||+++++.+..  .+..+++|||
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   82 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY   82 (287)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence            34557899999999999975 45788999998754 33345678999999999999999999998854  3468999999


Q ss_pred             ccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++..  .....++......++.||+.||+|||+.+++|++
T Consensus        83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~d  130 (287)
T cd06621          83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRD  130 (287)
T ss_pred             cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999988743  2335578889999999999999999999999984

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.73  E-value=7.3e-17  Score=129.73  Aligned_cols=121  Identities=24%  Similarity=0.298  Sum_probs=101.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~  187 (235)
                      .+.+.+.||.|.||.||++... ++..+++|.++...  ......+.+|+..+..++||||+++.+.+...  +..++++
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~   85 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM   85 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence            4556688999999999999764 57889999987542  22234567899999999999999999998776  8899999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++ +|.+++.... ..+++.....++.||+.||+|||+++++||+
T Consensus        86 e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~d  131 (293)
T cd07843          86 EYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRD  131 (293)
T ss_pred             hhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99975 9988885432 3589999999999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.73  E-value=1.7e-17  Score=132.74  Aligned_cols=120  Identities=24%  Similarity=0.333  Sum_probs=101.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|.||.||++.. .++..+++|.++..  .......+.+|+.+++.++|||++++++.+.+....++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            34567899999999999975 46789999998654  2223346788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++... ...+++..+..++.||+.||.|||+++++||+
T Consensus        82 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d  124 (284)
T cd07839          82 D-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRD  124 (284)
T ss_pred             C-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            7 4888887543 34589999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.73  E-value=5e-17  Score=130.50  Aligned_cols=119  Identities=21%  Similarity=0.248  Sum_probs=101.6

Q ss_pred             hhhhccCCCCceeEEEEEe----CCCCEEEEEEeecCC----hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDS----KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l  185 (235)
                      ++.+.||+|+||.||.+..    .++..+++|.+....    ....+.+.+|+.++..+ +|+||+.+.+.+......++
T Consensus         3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (290)
T cd05613           3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL   82 (290)
T ss_pred             eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence            4567899999999999864    367899999987532    22345678899999999 69999999999998889999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++...  ..+++.....++.|++.||+|||+++++||+
T Consensus        83 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~d  130 (290)
T cd05613          83 ILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRD  130 (290)
T ss_pred             EEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            99999999999998543  4588889999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.73  E-value=3.5e-17  Score=132.34  Aligned_cols=122  Identities=28%  Similarity=0.491  Sum_probs=99.1

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      .++...+.||+|+||.||++.. .++.    .+++|.+... .......+.+|+.+++.++||||+++++.+... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            3445567899999999999965 2343    5788887654 233344688999999999999999999998654 4678


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++|+|.+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus        86 v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d  134 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD  134 (303)
T ss_pred             eehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccc
Confidence            99999999999998543 24578899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=3.6e-17  Score=140.59  Aligned_cols=124  Identities=23%  Similarity=0.229  Sum_probs=102.7

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-------  181 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------  181 (235)
                      .+|.+.+.||+|+||.||++. ..++..+|+|.+...  .......+.+|+..+..++|+|++++...+...+       
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            366778899999999999996 456889999998654  3344557889999999999999999887664321       


Q ss_pred             -EEEEEEEcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 -QHMLVYVFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 -~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ..+++|||+++|+|.+++...  ....+++..+..++.|++.||+|||+++|+||+
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrD  168 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRD  168 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence             367999999999999998542  234688999999999999999999999999996

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=7.9e-17  Score=127.64  Aligned_cols=120  Identities=28%  Similarity=0.459  Sum_probs=100.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  185 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+...     .......+.+|+.+++.++|+||+++++.+.+.  ...++
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            45678899999999999964 46889999987532     223345788999999999999999999988653  46789


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++...  ..+++.....++.|++.||.|||+++++||+
T Consensus        84 v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d  131 (264)
T cd06653          84 FVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRD  131 (264)
T ss_pred             EEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            99999999999998543  4578899999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=9.4e-17  Score=126.08  Aligned_cols=120  Identities=31%  Similarity=0.473  Sum_probs=105.1

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh--hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK--QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||+|.+|.+|++.. ..+..+++|.+.....  .....+.+|+.++.+++|||++++.+.+.+.+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            34567899999999999965 3578999999976543  45567899999999999999999999999989999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++...  ..+++..+..++.|++.||.|||++|++||+
T Consensus        82 ~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d  124 (254)
T cd06627          82 ENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRD  124 (254)
T ss_pred             CCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            999999998543  5689999999999999999999999999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.73  E-value=8.7e-17  Score=126.40  Aligned_cols=122  Identities=22%  Similarity=0.377  Sum_probs=105.9

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||.|+||.||++... ++..+++|.+....  ......+..|+++++.++|||++++.+.+...+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            345678999999999999753 57899999987552  345567889999999999999999999998889999999999


Q ss_pred             cCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++....  ...+++.....++.|++.||+|||+++++|++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~d  128 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRD  128 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            9999999996532  36689999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.73  E-value=4.6e-17  Score=130.48  Aligned_cols=121  Identities=30%  Similarity=0.382  Sum_probs=95.8

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccC---CCCCccceeeEEEe-----CCE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAE-----KGQ  182 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~~  182 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+..++.+   +||||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            44567899999999999965 46789999998653  222223456677666554   79999999998754     245


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++ +|.+++.......+++..+..++.|++.||+|||++|++||+
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  133 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD  133 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            7899999975 898888654445689999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.73  E-value=5.4e-17  Score=134.31  Aligned_cols=119  Identities=24%  Similarity=0.257  Sum_probs=98.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|.+.+.||+|+||.||++.. ..+..+|+|.+...  .......+.+|+.+++.++||||+++++++...      ..
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence            4566778999999999999964 46789999998643  333445778999999999999999999988543      25


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|||+++ +|.+.+.    ..++...+..++.||+.||+|||++||+||+
T Consensus       101 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrD  148 (359)
T cd07876         101 VYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRD  148 (359)
T ss_pred             eEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            7999999975 6766663    2378888899999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.72  E-value=8e-17  Score=128.78  Aligned_cols=120  Identities=27%  Similarity=0.347  Sum_probs=102.6

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.||.|.+|.||++.. .++..+++|.+....  ......+.+|+..++.++|||++++++.+.+.+..++++||++
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            3457799999999999965 468899999987542  2234568899999999999999999999999999999999995


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~d  124 (283)
T cd07835          82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRD  124 (283)
T ss_pred             -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence             6899998554434689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.72  E-value=9.2e-17  Score=128.41  Aligned_cols=124  Identities=27%  Similarity=0.439  Sum_probs=102.7

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEe------CCE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE------KGQ  182 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~  182 (235)
                      ...+++.+.||+|+||.||++.. ..+..+++|.+.... .....+..|+.++..+ +|+|++++++.+..      ...
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   93 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ   93 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence            34556678899999999999965 467889999886543 2335678888888888 79999999998843      457


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|||+++|+|.+++.......+++..+..++.||+.||+|||+++++||+
T Consensus        94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d  146 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRD  146 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            89999999999999999655455688888899999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.72  E-value=7.2e-17  Score=129.65  Aligned_cols=120  Identities=26%  Similarity=0.309  Sum_probs=100.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+.... ......+.+|+..++.++|+||+++.+.+...+..++++||++
T Consensus         7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07870           7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH   86 (291)
T ss_pred             eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc
Confidence            45567899999999999964 467899999986542 2333467789999999999999999999999889999999996


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       ++|.+++.... ..+++..+..++.|++.||+|||+++++||+
T Consensus        87 -~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  128 (291)
T cd07870          87 -TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRD  128 (291)
T ss_pred             -CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence             68877774432 4578888899999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.72  E-value=6.9e-17  Score=131.46  Aligned_cols=122  Identities=28%  Similarity=0.305  Sum_probs=102.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+...+.||+|+||.||++.. .++..+++|.+...   .......+..|+.+++.++|||++++++.+.+.+..++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3355667899999999999975 46789999998644   2233457889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++ +|.+.+... ..++++.++..++.|++.||.|||+++++||+
T Consensus       105 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~d  150 (317)
T cd06635         105 EYCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRD  150 (317)
T ss_pred             eCCCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99974 887777433 35589999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=4.2e-17  Score=134.14  Aligned_cols=120  Identities=25%  Similarity=0.292  Sum_probs=98.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++++...      ..
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE   94 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence            4566778899999999999964 46789999998654  223345677899999999999999999887532      35


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++|++ +++|.+++..   ..+++..+..++.||+.||+|||+++|+||+
T Consensus        95 ~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrd  143 (343)
T cd07878          95 VYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRD  143 (343)
T ss_pred             EEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            68999988 6799888732   4589999999999999999999999999996

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.72  E-value=8.3e-17  Score=127.97  Aligned_cols=121  Identities=30%  Similarity=0.457  Sum_probs=98.1

Q ss_pred             hhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------E
Q 026630          115 NFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------Q  182 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~  182 (235)
                      .+.+.||+|+||.||++.+.    .+..+++|.+...  .....+.+.+|+.+++.++||||+++++.+....      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            45678999999999999642    3578999998654  3344567889999999999999999999875432      3


Q ss_pred             EEEEEEcccCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDE----NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++|+|.+++...    ....+++.....++.||+.||+|||+++++||+
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d  138 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRD  138 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            47889999999998887432    123478888999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.72  E-value=9.9e-17  Score=129.43  Aligned_cols=124  Identities=28%  Similarity=0.363  Sum_probs=102.1

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-----
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-----  181 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----  181 (235)
                      ....+.+.+.||+|+||.||+|... ++..+++|.+....  ......+.+|+.+++.++|||++++++.+.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            3455667788999999999999764 57899999987542  233456788999999999999999999886544     


Q ss_pred             -----EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 -----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                           ..++++||+++ ++..++... ...+++.++..++.||+.||+|||+++|+||+
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~d  141 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRD  141 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence                 78999999976 777777443 34689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.72  E-value=7.4e-17  Score=130.68  Aligned_cols=122  Identities=29%  Similarity=0.325  Sum_probs=102.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+...+.||+|+||.||++.. .++..+++|.+...   .....+.+.+|+.+++.++|||++++.+.+.+.+..++++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            3356678899999999999965 36789999998643   2233457889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||++ |++.+++... ...+++..+..++.|++.||.|||+++++||+
T Consensus        95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~d  140 (307)
T cd06607          95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRD  140 (307)
T ss_pred             HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            9997 5777776432 34589999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.72  E-value=4.5e-17  Score=130.42  Aligned_cols=120  Identities=27%  Similarity=0.348  Sum_probs=102.0

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +++.+.||+|+||.||++... ++..+++|.+...  .....+.+.+|+.+++.++|+||+++++.+...+..++++||+
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   82 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV   82 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence            456788999999999999754 5789999988653  3334567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.+..+...  ...+++.+...++.||+.||+|||+++++||+
T Consensus        83 ~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  125 (288)
T cd07833          83 ERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD  125 (288)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            98777665533  24589999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.72  E-value=1.3e-16  Score=125.34  Aligned_cols=119  Identities=29%  Similarity=0.415  Sum_probs=104.3

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEEEc
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~  189 (235)
                      ...+.||+|++|.||++... ++..+++|.+....  ....+.+.+|+..+++++||||+++.+.+...  ...++++||
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   82 (260)
T cd06606           3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY   82 (260)
T ss_pred             eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence            44578999999999999764 68899999987553  24556789999999999999999999999887  889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.|++.||+|||+.+++|++
T Consensus        83 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~d  126 (260)
T cd06606          83 VSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRD  126 (260)
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999543  3789999999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.72  E-value=4.7e-18  Score=131.62  Aligned_cols=124  Identities=22%  Similarity=0.353  Sum_probs=108.8

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      -+...+++.+.||+|+||.||++. ...|..+|+|.++.+.  ..++..+|+.+|.+.+.|.+|+++|.+.....+++||
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence            344556778899999999999994 4568899999987653  4568899999999999999999999999988999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||..|+..+.++. +++++++.++..+.++.++||+|||..+-|||+
T Consensus       108 EYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRD  154 (502)
T KOG0574|consen  108 EYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRD  154 (502)
T ss_pred             hhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhh
Confidence            99999999999965 447799999999999999999999999999996

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.72  E-value=7.5e-17  Score=136.85  Aligned_cols=119  Identities=26%  Similarity=0.415  Sum_probs=95.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~  182 (235)
                      ..|.+.+.||+|+||.||++.. .++..||+|.+....    ....+|+.+++.++||||+++.+++...        ..
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            3466778999999999999965 467899999885432    1235799999999999999998876432        24


Q ss_pred             EEEEEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|||+++ +|.+++..  .....+++..+..++.||+.||+|||+++|+||+
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrD  195 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRD  195 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            6799999985 77776642  2335688999999999999999999999999996

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.72  E-value=1.4e-16  Score=127.36  Aligned_cols=115  Identities=24%  Similarity=0.314  Sum_probs=92.8

Q ss_pred             ccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---hcHHHHHHHHHH---HccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSK---QGEKEFQTEVML---LGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .||+|+||.||++.. .++..+|+|.+.....   .....+..|..+   +...+|||++.+.+.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999965 4578999999865421   112233444433   334479999999999988889999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++...  ..+++.....++.|++.||+|||+++++||+
T Consensus        81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d  122 (279)
T cd05633          81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRD  122 (279)
T ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCC
Confidence            99999988543  4589999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.72  E-value=1.4e-16  Score=129.50  Aligned_cols=116  Identities=21%  Similarity=0.285  Sum_probs=94.0

Q ss_pred             hhccCCCCceeEEEEEeC---CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEEEccc
Q 026630          117 TTLIGQGAFGPVYKAQMS---TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVYVFMS  191 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~  191 (235)
                      .+.||+|+||.||++...   ++..+|+|.+....  ....+.+|+.+++.++||||+++.+.+..  ....++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            357999999999999753   45789999986442  22356789999999999999999998854  456889999996


Q ss_pred             CCChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDE-------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~-------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++...       ....+++..+..++.||+.||+|||+++|+||+
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrD  133 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD  133 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCC
Confidence            5 888877421       123578888999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.72  E-value=8.3e-17  Score=128.89  Aligned_cols=122  Identities=25%  Similarity=0.328  Sum_probs=99.2

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEE-----eCCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA-----EKGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~-----~~~~~~l  185 (235)
                      +|.+.+.||+|+||.||++.. .++..+++|.+.... .....+.+|+.++..+ +||||+++++.+.     ..+..++
T Consensus        19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l   97 (286)
T cd06638          19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL   97 (286)
T ss_pred             ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence            345567899999999999964 457889999875432 2234678899999998 7999999999874     3457899


Q ss_pred             EEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++++|.+++..  .....+++..+..++.|++.||.|||+++++||+
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  149 (286)
T cd06638          98 VLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRD  149 (286)
T ss_pred             EEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            9999999999988753  2234578888999999999999999999999985

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=3.3e-18  Score=143.87  Aligned_cols=122  Identities=24%  Similarity=0.301  Sum_probs=106.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      -|.+..-||.|+||.||++.. ..+...|.|.+.........+|+-|+.+|...+||+||++++.|...+.++++.|||.
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~  112 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG  112 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence            345556689999999999954 3455677888877777888899999999999999999999999988999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||-....+..- ...++..++.-+|+|++.||.|||+++||||+
T Consensus       113 GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRD  155 (1187)
T KOG0579|consen  113 GGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRD  155 (1187)
T ss_pred             CchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence            99998877543 35689999999999999999999999999996

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.2e-17  Score=130.28  Aligned_cols=116  Identities=28%  Similarity=0.399  Sum_probs=99.7

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEee--cCChhcHHHHHHHHHHHccCCCCCccceeeEEEe-----CCEEEEEEE
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLA--TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-----KGQHMLVYV  188 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~e  188 (235)
                      .+.||+|+||.|+.+. ..++..||+|.+.  .......+...+|+..++.++|+||+.+.+.+..     -+..|+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e  106 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE  106 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence            4679999999999995 4578999999987  3355566778999999999999999999999865     256899999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+ -||...++.+  ..++...+..+.+||++||.|+|+.+|+||+
T Consensus       107 lMe-tDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRD  150 (359)
T KOG0660|consen  107 LME-TDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRD  150 (359)
T ss_pred             HHh-hHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccc
Confidence            994 4999999554  4489999999999999999999999999997

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.8e-16  Score=125.88  Aligned_cols=123  Identities=28%  Similarity=0.412  Sum_probs=103.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCC------EE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKG------QH  183 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------~~  183 (235)
                      .+|.+.+.||+|++|.||++... ++..+++|.+..... ....+.+|+.+++++ +|+||+++++.+....      ..
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            45567788999999999999763 567899999875533 345788999999998 7999999999986644      48


Q ss_pred             EEEEEcccCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++....  ...+++..+..++.|++.||.|||+++++|++
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~  138 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRD  138 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            99999999999999885422  35689999999999999999999999999985

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.71  E-value=1.4e-16  Score=129.35  Aligned_cols=121  Identities=24%  Similarity=0.340  Sum_probs=100.2

Q ss_pred             hhhhhccCCCCceeEEEEEeC---CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS---TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l  185 (235)
                      +.+.+.||+|+||.||++...   .+..+|+|.+....   ......+.+|+.++..++||||+++.+.+.+.  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            345678999999999999753   46899999987632   33345678899999999999999999999887  78999


Q ss_pred             EEEcccCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDE---NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+||+++ +|.+++...   ....++......++.||+.||+|||+++++||+
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~d  133 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRD  133 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCC
Confidence            9999975 777766432   123678889999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.71  E-value=2.5e-16  Score=123.23  Aligned_cols=121  Identities=34%  Similarity=0.491  Sum_probs=106.4

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      |...+.||+|.+|.||++... ++..+++|.+..........+.+|+..++.++|+|++++.+.+......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            345678999999999999764 5788999999766555567889999999999999999999999998999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.... ..+++.....++.|++.||.|||+++++||+
T Consensus        82 ~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~d  123 (253)
T cd05122          82 GSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRD  123 (253)
T ss_pred             CcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCC
Confidence            99999985432 4689999999999999999999999999985

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.71  E-value=2e-16  Score=130.71  Aligned_cols=117  Identities=27%  Similarity=0.423  Sum_probs=104.1

Q ss_pred             hccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      ++||+|.||.||-|. .++|+.||||.+.+.  ..+....+.+|+.++.+++||.||.+...|+..+..++|||-+ +||
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GD  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGD  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cch
Confidence            789999999999994 468999999999765  3344567889999999999999999999999999999999999 569


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+++-++..+.+++.....+..||+.||.|||.++|+|-+
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD  689 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD  689 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence            88888777778899999999999999999999999999954

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.71  E-value=5.4e-17  Score=129.30  Aligned_cols=120  Identities=25%  Similarity=0.343  Sum_probs=103.8

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+...   .......+..|..++..++ ||||+++++.+.+.+..+++||
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            45567899999999999975 36889999998653   2233456788999999998 9999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++...  ..+++..+..++.|++.||+|||+++++|++
T Consensus        83 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~d  127 (280)
T cd05581          83 YAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRD  127 (280)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            99999999999543  4689999999999999999999999999985

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.71  E-value=8.9e-17  Score=128.47  Aligned_cols=120  Identities=28%  Similarity=0.383  Sum_probs=101.0

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+.+.||+|++|.||+|... .+..+++|.+... .........+|+..+++++ |||++++++.+.+.+..+++|||+ 
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-   80 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-   80 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence            45678999999999999764 4678999998654 2222334567889999998 999999999999999999999999 


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.......+++.++..++.|++.+|.|||+++++|++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~d  124 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRD  124 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            78999988654435689999999999999999999999999985

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=2.3e-16  Score=124.60  Aligned_cols=116  Identities=28%  Similarity=0.303  Sum_probs=94.9

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHH-HccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVML-LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||++.. ..+..+++|.++...   ......+..|... ....+|+|++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999965 457899999986542   1222334455544 4455899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++...  ..+++.++..++.|++.||.|||+.+++||+
T Consensus        82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d  122 (260)
T cd05611          82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD  122 (260)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999998543  4588999999999999999999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.70  E-value=1.5e-16  Score=130.35  Aligned_cols=117  Identities=26%  Similarity=0.243  Sum_probs=98.7

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhc--------------HHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG--------------EKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      +.+.||.|+||.||++.. ..+..+++|.+.......              ...+.+|+.++..++|+||+++++.+...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            346799999999999964 468899999986442211              12467899999999999999999999999


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||++ |+|.+++..  ...++......++.|++.||+|||+++++||+
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~d  144 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWYFMHRD  144 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999997 599998843  34588999999999999999999999999985

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.70  E-value=3.3e-16  Score=124.33  Aligned_cols=122  Identities=23%  Similarity=0.320  Sum_probs=99.7

Q ss_pred             hhhhhccCCCCceeEEEEEeCC--CCEEEEEEeecC----------ChhcHHHHHHHHHHHcc-CCCCCccceeeEEEeC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST--GETVAVKVLATD----------SKQGEKEFQTEVMLLGR-LHHRNLVNLVGYCAEK  180 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~  180 (235)
                      |.+.+.||+|+||.||++....  +..+++|.+...          ......++..|+.++.+ ++||||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            4556789999999999997644  678999987532          12233457788887765 6999999999999999


Q ss_pred             CEEEEEEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +..++++||+++++|.+++..  .....+++..+..++.|++.||.|||+ .+++||+
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~d  139 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRD  139 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecC
Confidence            999999999999999988743  223468889999999999999999996 7899985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.70  E-value=1.5e-16  Score=127.99  Aligned_cols=121  Identities=22%  Similarity=0.264  Sum_probs=98.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCE-----EE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQ-----HM  184 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~-----~~  184 (235)
                      +.+.+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.+++.+ +||||+++++.+...+.     .+
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence            34567899999999999975 467899999876542  22345688899999999 56999999999876554     79


Q ss_pred             EEEEcccCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDEN---YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++ +|.+++....   ...+++..+..++.||+.||+|||+++++||+
T Consensus        83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~d  135 (295)
T cd07837          83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRD  135 (295)
T ss_pred             EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            99999985 8988885432   24589999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.70  E-value=1.7e-16  Score=126.80  Aligned_cols=121  Identities=22%  Similarity=0.302  Sum_probs=97.7

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-hhcHHHHHHHHHH-HccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-KQGEKEFQTEVML-LGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||+|+||.||++.. .++..||+|.+.... ......+..|+.. ++..+|||++++++.+...+..++++||+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~   82 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM   82 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence            44567899999999999965 468899999987542 2233455566664 66679999999999999988999999999


Q ss_pred             cCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          191 SKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      + |+|.+++..  .....+++..+..++.||+.||+|||++ +++||+
T Consensus        83 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~d  129 (283)
T cd06617          83 D-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRD  129 (283)
T ss_pred             c-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCC
Confidence            6 588887753  2234689999999999999999999997 999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.70  E-value=1.1e-16  Score=132.24  Aligned_cols=119  Identities=22%  Similarity=0.247  Sum_probs=97.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|.+.+.||+|+||.||++.. ..+..+|+|.+...  .......+.+|+.+++.++||||+++++.+...      ..
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   96 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD   96 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence            4566778999999999999964 46789999998654  333445778899999999999999999988543      35


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|||+++ +|.+.+..    .+++..+..++.|++.||+|||++||+||+
T Consensus        97 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrD  144 (355)
T cd07874          97 VYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRD  144 (355)
T ss_pred             eEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            7899999975 77777632    378888999999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.70  E-value=1.4e-16  Score=127.73  Aligned_cols=119  Identities=22%  Similarity=0.267  Sum_probs=101.1

Q ss_pred             hhhhccCCCCceeEEEEEe----CCCCEEEEEEeecCC----hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDS----KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l  185 (235)
                      .+.+.||+|+||.||++..    .++..+++|.++...    ......+..|+.++..+ +||||+.+.+.+......++
T Consensus         3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l   82 (288)
T cd05583           3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL   82 (288)
T ss_pred             eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence            4567899999999999863    356789999987432    22345678999999999 69999999999998899999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++|+|.+++...  ..+++.....++.|++.||+|||+++++||+
T Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~d  130 (288)
T cd05583          83 ILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRD  130 (288)
T ss_pred             EEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99999999999998543  4588899999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.70  E-value=1.7e-16  Score=131.54  Aligned_cols=119  Identities=21%  Similarity=0.238  Sum_probs=97.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|.+.+.||+|+||.||++.. ..+..+|+|.+...  .......+.+|+.+++.++||||+++++.+...      ..
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~  103 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  103 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence            4566778999999999999964 46788999998653  233445778999999999999999999987543      35


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++ +|.+++..    .+++..+..++.|++.||+|||++||+||+
T Consensus       104 ~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  151 (364)
T cd07875         104 VYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRD  151 (364)
T ss_pred             EEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCC
Confidence            7999999975 77777732    378888999999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.70  E-value=2.3e-16  Score=125.92  Aligned_cols=119  Identities=24%  Similarity=0.326  Sum_probs=97.7

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeC--CEEEEEEEc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEK--GQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e~  189 (235)
                      .+.+.||+|.||.||++.. .++..+++|.+... .........+|+..+.++ +|+|++++++.+.+.  +..++++||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            4567799999999999964 46788999988654 222223456788888888 599999999999887  889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++ |+|.+.+.... ..+++.++..++.|++.||+|||+++++||+
T Consensus        82 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~d  125 (282)
T cd07831          82 MD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRD  125 (282)
T ss_pred             CC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            97 58888885432 4689999999999999999999999999985

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.70  E-value=1.3e-16  Score=125.40  Aligned_cols=122  Identities=20%  Similarity=0.308  Sum_probs=103.9

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.||.|+||.||++.. .++..+++|.+...  .......+..|+.+++.++|+||+++.+.+......++++||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            34567899999999999964 46788999998754  3344557789999999999999999999998889999999999


Q ss_pred             cCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++...  ....+++.....++.|++.||+|||++|++||+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~  128 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRD  128 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            999999998542  234588899999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.70  E-value=3.5e-16  Score=123.50  Aligned_cols=122  Identities=20%  Similarity=0.260  Sum_probs=101.7

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e  188 (235)
                      |.+.+.||.|+||.||++.. .++..+++|.+...  .....+.+..|+..++.++|||++++++.+..  ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            34567899999999999964 46788999998644  33445578899999999999999999997753  456789999


Q ss_pred             cccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHh-----cCCccccC
Q 026630          189 FMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLH-----DGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH-----~~~ivHr~  235 (235)
                      |+++++|.+++...  ....+++..++.++.||+.||+|||     +.+++||+
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~d  135 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRD  135 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecC
Confidence            99999999998542  2356899999999999999999999     99999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.70  E-value=1.4e-16  Score=130.99  Aligned_cols=119  Identities=26%  Similarity=0.326  Sum_probs=100.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----------
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----------  180 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----------  180 (235)
                      ++.+.+.||.|+||.||++.. .++..+++|.+........+.+.+|+.+++.++||||+++++.+...           
T Consensus         6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (342)
T cd07854           6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL   85 (342)
T ss_pred             ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence            455678899999999999964 46789999998766555566788999999999999999999776443           


Q ss_pred             ---CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 ---GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                         ...++++||++ ++|.+++..   ..+++..+..++.||+.||.|||++|++||+
T Consensus        86 ~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~d  139 (342)
T cd07854          86 TELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRD  139 (342)
T ss_pred             cccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence               35789999997 599888843   3588999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.69  E-value=2.1e-16  Score=130.03  Aligned_cols=119  Identities=26%  Similarity=0.325  Sum_probs=98.5

Q ss_pred             HhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~  183 (235)
                      +|.+.+.||+|+||.||++. ..++..||+|.+...  .......+.+|+.+++.++||||+++.+.+....      ..
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF   95 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence            35566889999999999996 456889999998543  2333456789999999999999999999886543      35


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+ +++|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus        96 ~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~d  143 (343)
T cd07880          96 YLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRD  143 (343)
T ss_pred             EEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            8999999 6799888743   4589999999999999999999999999995

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.69  E-value=3.5e-16  Score=128.33  Aligned_cols=121  Identities=26%  Similarity=0.355  Sum_probs=100.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe--CCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE--KGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~  184 (235)
                      ...+.+.+.||+|+||.||++... ++..+++|.+...  .......+.+|+.++..+ +||||+++++.+..  ....+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            345667788999999999999754 5788999988542  233345677899999999 99999999998854  34689


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||++ ++|..++...   .+++.....++.||+.||+|||++|++||+
T Consensus        86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~d  132 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRD  132 (337)
T ss_pred             EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999997 5999888442   578889999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.69  E-value=3e-16  Score=127.20  Aligned_cols=121  Identities=31%  Similarity=0.400  Sum_probs=99.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~  187 (235)
                      .+++.+.||+|+||.||++.. .++..||+|.+....  ......+.+|+.++..++|+|++++.+.+...  +..++++
T Consensus         8 ~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   87 (309)
T cd07845           8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVM   87 (309)
T ss_pred             ceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEE
Confidence            345667899999999999975 458899999986542  22233567899999999999999999998654  5689999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++ +|.+++... ...+++.++..++.||+.||+|||+++++||+
T Consensus        88 e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  133 (309)
T cd07845          88 EYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRD  133 (309)
T ss_pred             ecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99975 888888543 35689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.69  E-value=2.1e-17  Score=138.49  Aligned_cols=118  Identities=24%  Similarity=0.314  Sum_probs=98.5

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecC----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE--EEEEEE
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ--HMLVYV  188 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e  188 (235)
                      +.+.||+|+|-+||+|.. .+|..||--.++..    .+...+.|..|+.+|+.|+||||++++..+.+...  .-+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            446799999999999954 35667775554432    44556789999999999999999999998876544  678999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      .+..|+|+.|+.+  .+.++.+....||+||++||.|||++.  ||||+
T Consensus       124 L~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRD  170 (632)
T KOG0584|consen  124 LFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRD  170 (632)
T ss_pred             cccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccc
Confidence            9999999999954  456889999999999999999999998  99996

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.69  E-value=3.4e-16  Score=125.11  Aligned_cols=119  Identities=29%  Similarity=0.388  Sum_probs=101.6

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEEEc
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~  189 (235)
                      .+.+.||.|+||.||++... ++..+++|.+...  .......+.+|+.+++.++|||++++.+.+...  +..++++||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            34577999999999999764 4789999999765  233445788999999999999999999999887  789999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++ +|.+++.... ..+++..+..++.||+.||+|||+++++|++
T Consensus        82 ~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~d  125 (287)
T cd07840          82 MDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRD  125 (287)
T ss_pred             ccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            975 8988885432 4689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.69  E-value=9.1e-16  Score=124.69  Aligned_cols=118  Identities=30%  Similarity=0.336  Sum_probs=99.7

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ..+.||+|+||.||++.. .++..+++|.+...   .......+..|+..++.++|||++++.+.+.+....++++||+.
T Consensus        25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  104 (313)
T cd06633          25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL  104 (313)
T ss_pred             cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence            346799999999999964 46788999998643   22334568899999999999999999999999999999999996


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       |++.+++... ..++++.++..++.||+.||.|||++|++||+
T Consensus       105 -~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~d  146 (313)
T cd06633         105 -GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRD  146 (313)
T ss_pred             -CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence             5887777443 34689999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.69  E-value=4.8e-16  Score=126.32  Aligned_cols=115  Identities=21%  Similarity=0.287  Sum_probs=93.2

Q ss_pred             hccCCCCceeEEEEEeC---CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS---TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~  192 (235)
                      ..||+|+||.||++...   ++..+|+|.+....  ....+.+|+.+++.++||||+++.+++..  ....++++||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            56999999999999753   34689999886442  22357889999999999999999998853  4678899999875


Q ss_pred             CChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDE-------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~-------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +|.+++...       ....+++..+..++.||+.||+|||+++++||+
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~D  133 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRD  133 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCC
Confidence             787776421       123478888999999999999999999999996

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.69  E-value=4.9e-16  Score=124.18  Aligned_cols=115  Identities=25%  Similarity=0.302  Sum_probs=92.7

Q ss_pred             ccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---hcHHHHHHHHH---HHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSK---QGEKEFQTEVM---LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .||+|+||.||++.. .+++.+|+|.+.....   .....+..|..   .+...+||||+.+.+.+.+.+..++++||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            389999999999964 4578999999865421   11122333433   3444589999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++..  ...+++..+..++.|++.||+|||+++++||+
T Consensus        81 g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  122 (278)
T cd05606          81 GGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRD  122 (278)
T ss_pred             CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCC
Confidence            9999988843  35689999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.69  E-value=3e-17  Score=136.60  Aligned_cols=120  Identities=20%  Similarity=0.221  Sum_probs=99.5

Q ss_pred             hhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCC--------hhcHHHHHHHHHHHccCC---CCCccceeeEEEeCC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDS--------KQGEKEFQTEVMLLGRLH---HRNLVNLVGYCAEKG  181 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~  181 (235)
                      |...+.+|.|+||.|+.+.++. .-.|++|.+.++.        .......-.|+.+|..++   |+||++++.+|++++
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd  642 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD  642 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence            3445679999999999997644 4578999986541        112224568999999996   999999999999999


Q ss_pred             EEEEEEEc-ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVF-MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.|+++|- -++.||++++  ..+..+++.++..+.+||+.|+++||++|||||+
T Consensus       643 ~yyl~te~hg~gIDLFd~I--E~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrd  695 (772)
T KOG1152|consen  643 YYYLETEVHGEGIDLFDFI--EFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRD  695 (772)
T ss_pred             eeEEEecCCCCCcchhhhh--hccCccchHHHHHHHHHHHhccccccccCceecc
Confidence            99999995 4678999999  4446699999999999999999999999999996

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.69  E-value=3.7e-16  Score=126.40  Aligned_cols=121  Identities=29%  Similarity=0.379  Sum_probs=98.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--------
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--------  181 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------  181 (235)
                      .|.+.+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.+++.++||||+++++.+...+        
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   92 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG   92 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence            355678899999999999965 367899999886442  222335678999999999999999999986543        


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..++++||+.+ +|.+++... ...+++.++..++.||+.||+|||+++++||+
T Consensus        93 ~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d  144 (310)
T cd07865          93 SFYLVFEFCEH-DLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRD  144 (310)
T ss_pred             eEEEEEcCCCc-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            35999999965 888887443 24589999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.68  E-value=2.4e-16  Score=129.17  Aligned_cols=121  Identities=23%  Similarity=0.292  Sum_probs=100.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~  184 (235)
                      ..|.+.+.||.|+||.||++.. .++..+++|.+...  .......+.+|+.+++.++||||+++.+.+..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            3455667899999999999964 46889999998654  22345567889999999999999999988753    35689


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+. ++|.+++...  ..+++..+..++.||+.||+|||+++++||+
T Consensus        85 lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  132 (334)
T cd07855          85 VVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRD  132 (334)
T ss_pred             EEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999996 5899988433  4589999999999999999999999999985

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.68  E-value=7.5e-16  Score=124.88  Aligned_cols=124  Identities=27%  Similarity=0.314  Sum_probs=102.6

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ....+...+.||+|+||.||++.. .++..+++|.+...   ......++.+|+.+++.++|+|++++.+++......++
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            344455567799999999999975 45778999988643   23334578899999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+. |++.+.+... ..++++..+..++.|++.||.|||+++++||+
T Consensus        93 v~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~d  140 (308)
T cd06634          93 VMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  140 (308)
T ss_pred             EEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999996 5887777433 34588999999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=2.2e-17  Score=146.25  Aligned_cols=126  Identities=22%  Similarity=0.242  Sum_probs=108.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      .+.+.++.+.++||+|+||.|..... .++..+|+|.+.+.   ......-|..|-.+|..-+.+.|++++-.|.+..++
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence            45566778889999999999999964 56788999999764   233444577777888888999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+||||++||||..++  ++...+++..+..|+..|+.||+-||+.|+|||+
T Consensus       151 YlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRD  200 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRD  200 (1317)
T ss_pred             EEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            9999999999999999  3445799999999999999999999999999996

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.68  E-value=8.5e-16  Score=122.09  Aligned_cols=114  Identities=20%  Similarity=0.225  Sum_probs=91.2

Q ss_pred             hhhhc--cCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTL--IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~--lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+.+.  ||+|+||.||++.. .++..+++|.+........     |......+ +|||++++++.+...+..+++|||+
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   91 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYI   91 (267)
T ss_pred             ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcC
Confidence            34444  59999999999964 4678899999865422211     22211112 7999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++...  ..+++.++..++.||+.||+|||+++++||+
T Consensus        92 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  134 (267)
T PHA03390         92 KDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHND  134 (267)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            999999999544  3789999999999999999999999999985

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=1.8e-17  Score=138.47  Aligned_cols=119  Identities=28%  Similarity=0.315  Sum_probs=100.3

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .-..-||.|+||-||-+.. .+...||||...-.   ....+.++++|+..+..++|||++.+-|+|......|+|||||
T Consensus        29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC  108 (948)
T KOG0577|consen   29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC  108 (948)
T ss_pred             HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence            3345599999999999964 46778999987533   3455778999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      -| +-.+++.-. ++++.+-.+..++.+.+.||+|||+++.|||+
T Consensus       109 lG-SAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRD  151 (948)
T KOG0577|consen  109 LG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRD  151 (948)
T ss_pred             hc-cHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhh
Confidence            54 777766332 35688889999999999999999999999996

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.9e-16  Score=121.87  Aligned_cols=114  Identities=29%  Similarity=0.354  Sum_probs=99.7

Q ss_pred             cCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          120 IGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       120 lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      ||.|+||.||++... ++..+++|.+....   ......+..|+.+++.++|||++++++.+...+..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999754 57899999987542   22445788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++...  ..+++.....++.|++.||.|||+.+++|++
T Consensus        81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~  118 (250)
T cd05123          81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRD  118 (250)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            9999543  3589999999999999999999999999984

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=5e-16  Score=133.81  Aligned_cols=127  Identities=21%  Similarity=0.292  Sum_probs=93.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC--CCEEEEEE--------------eec---CChhcHHHHHHHHHHHccCCCC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST--GETVAVKV--------------LAT---DSKQGEKEFQTEVMLLGRLHHR  168 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~vavK~--------------~~~---~~~~~~~~~~~e~~~l~~l~h~  168 (235)
                      +.....|.+.+.||+|+||.||++....  +...+.|.              +.+   ........+.+|+.+++.++||
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence            3345667888999999999999986422  11111111              100   1122334678999999999999


Q ss_pred             CccceeeEEEeCCEEEEEEEcccCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN---YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       169 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++++...+..++++|++. ++|..++....   .......+...++.||+.||+|||+++||||+
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrD  292 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRD  292 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99999999999999999999985 47877775422   12233556788999999999999999999996

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.4e-17  Score=134.31  Aligned_cols=117  Identities=26%  Similarity=0.383  Sum_probs=102.9

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .+.||+|.||.||+|.. ..++.||+|.+.-+ ......+...|+.++..++++||.+++|.+..+..++++||||.+|+
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGs   97 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGS   97 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcc
Confidence            36799999999999954 46789999999865 44556788999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+.|...  ..+++....-+.++++.|+.|||.++.+||+
T Consensus        98 v~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrD  136 (467)
T KOG0201|consen   98 VLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRD  136 (467)
T ss_pred             hhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceeccc
Confidence            99999433  3457788888999999999999999999996

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.67  E-value=2.3e-16  Score=124.64  Aligned_cols=122  Identities=20%  Similarity=0.279  Sum_probs=97.6

Q ss_pred             hhhhhccCCCCceeEEEEEeCC-CCEEEEEEeec---C--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST-GETVAVKVLAT---D--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~---~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      |.+.+.||+|+||.||++.... +...++|.+..   .  .......+..|+.+++.++||||+++++.+.+....++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            4556789999999999996533 33444555432   1  2223345678889999999999999999998888899999


Q ss_pred             EcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++..  .....+++..+..++.|++.||.|||+++++|++
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~  131 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRD  131 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccC
Confidence            99999999988853  2235689999999999999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.67  E-value=8.2e-16  Score=123.52  Aligned_cols=122  Identities=29%  Similarity=0.353  Sum_probs=99.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeC-----CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      .+.+.+.||+|+||.||++.. .++..+++|.+.... .....+..|+.++.++ +|||++++++.+...     +..++
T Consensus        23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l  101 (291)
T cd06639          23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL  101 (291)
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence            345667899999999999965 467899999986432 2234667888888888 899999999998643     35899


Q ss_pred             EEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++..  .....+++..+..++.|++.||+|||+++++||+
T Consensus       102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  153 (291)
T cd06639         102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRD  153 (291)
T ss_pred             EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999999999998853  2234688999999999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.67  E-value=2.1e-16  Score=133.29  Aligned_cols=126  Identities=27%  Similarity=0.390  Sum_probs=107.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-C-----CCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-H-----RNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~  180 (235)
                      |....+|.+.+.||+|+||+|.++. ..+++.||||+++.. ......-..|+.+|..++ |     -|+|+++++|...
T Consensus       182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr  260 (586)
T KOG0667|consen  182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR  260 (586)
T ss_pred             ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence            3333466677899999999999995 457899999999644 333344568888888886 3     4999999999999


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+|.+.. +|.+++..++...|+...+..++.||+.||.+||+.+|||-|
T Consensus       261 ~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcD  314 (586)
T KOG0667|consen  261 NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCD  314 (586)
T ss_pred             cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            999999999966 999999988888899999999999999999999999999964

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=8.7e-17  Score=125.81  Aligned_cols=122  Identities=22%  Similarity=0.277  Sum_probs=106.0

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+++.++||+|.||+|-+++ ...++.+|+|+++++   .......-+.|-++++..+||.+..+--.|...+.+|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            445678999999999999984 567899999999876   3444556678899999999999999988899999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||..+|.|...|.+  ...|++.....+..+|+.||.|||+++||.|+
T Consensus       248 eyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRD  293 (516)
T KOG0690|consen  248 EYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRD  293 (516)
T ss_pred             EEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCCeeeee
Confidence            99999999988843  45689999999999999999999999999985

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.67  E-value=7.1e-16  Score=126.16  Aligned_cols=119  Identities=26%  Similarity=0.309  Sum_probs=98.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e  188 (235)
                      .|.+.+.||.|+||.||++.. .++..+++|.+...  .....+.+..|+.++..++|||++++.+.+.. ....++++|
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e   90 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE   90 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence            355668899999999999964 47889999988643  22334577899999999999999999998865 557889999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+ +++|..++..   ..+++.....++.|++.||+|||+++++||+
T Consensus        91 ~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d  133 (328)
T cd07856          91 LL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRD  133 (328)
T ss_pred             hh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            98 5589888843   3478888889999999999999999999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.67  E-value=4.8e-16  Score=117.14  Aligned_cols=115  Identities=24%  Similarity=0.224  Sum_probs=86.3

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCCh--hc-------HH-----------------HHHHHHHHHccCCCCCc
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK--QG-------EK-----------------EFQTEVMLLGRLHHRNL  170 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~~-------~~-----------------~~~~e~~~l~~l~h~ni  170 (235)
                      .+.||+|+||.||++...+|+.||+|.++....  ..       ..                 ....|+..+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            357999999999999877899999999975421  11       01                 12348889999988877


Q ss_pred             cceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCccccC
Q 026630          171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL-HDGVSCHLF  235 (235)
Q Consensus       171 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yL-H~~~ivHr~  235 (235)
                      ........ . ..++||||++++++......  ...++..+...++.|++.+|+|| |+.||+||+
T Consensus        82 ~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrD  143 (190)
T cd05147          82 PCPEPILL-K-SHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHAD  143 (190)
T ss_pred             CCCcEEEe-c-CCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            54433322 2 23799999998877655322  24688899999999999999999 799999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.67  E-value=8e-16  Score=123.07  Aligned_cols=120  Identities=28%  Similarity=0.353  Sum_probs=96.8

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccC---CCCCccceeeEEEeCCE-----E
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAEKGQ-----H  183 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~-----~  183 (235)
                      ++.+.||+|.||.||++... ++..+++|.+...  .......+.+|+.++..+   +|||++++.+.+.+.+.     .
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            34678999999999999865 4789999999743  222234566777665544   69999999999987766     8


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++ +|.+++.......+++.++..++.|++.||+|||+++++|++
T Consensus        82 ~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~  132 (287)
T cd07838          82 TLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRD  132 (287)
T ss_pred             EEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            999999975 898888654334689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.67  E-value=4.9e-16  Score=127.47  Aligned_cols=119  Identities=23%  Similarity=0.313  Sum_probs=98.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      +|.+.+.||+|+||.||++.. .++..|++|.+... .......+..|+.+++.++||||+++.+.+...     ...++
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   85 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI   85 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence            455678899999999999964 46789999998643 333445688899999999999999999887543     35789


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++ +|...+..   ..+++..+..++.|++.||+|||+++++||+
T Consensus        86 v~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~d  131 (336)
T cd07849          86 VQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRD  131 (336)
T ss_pred             Eehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999975 88887733   4589999999999999999999999999995

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.67  E-value=3.6e-16  Score=127.82  Aligned_cols=119  Identities=28%  Similarity=0.362  Sum_probs=101.4

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-----EEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-----QHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l  185 (235)
                      |.+.+.||.|++|.||++... .+..+++|.+....  ....+.+.+|+..++.++||||+++.+.+....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            456688999999999999754 47899999987542  444567899999999999999999999987664     7899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++ +|.+++...  ..+++..+..++.|++.||+|||++|++||+
T Consensus        82 v~e~~~~-~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~d  128 (330)
T cd07834          82 VTELMET-DLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRD  128 (330)
T ss_pred             Eecchhh-hHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999984 898888543  4789999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.67  E-value=4.4e-16  Score=124.27  Aligned_cols=118  Identities=32%  Similarity=0.422  Sum_probs=101.7

Q ss_pred             hhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          116 FTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+.||+|.+|.||++... ++..+++|.+...  .....+.+..|+.+++.++|+|++++.+.+.+.+..++++||++ 
T Consensus         3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-   81 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-   81 (282)
T ss_pred             eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence            4567999999999999754 5889999998765  23344577889999999999999999999998899999999998 


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++.... ..+++..+..++.|++.||+|||+++++||+
T Consensus        82 ~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~  123 (282)
T cd07829          82 MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRD  123 (282)
T ss_pred             cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            59999995432 4689999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PTZ00284 protein kinase; Provisional

Probab=99.67  E-value=1.8e-15  Score=129.45  Aligned_cols=120  Identities=20%  Similarity=0.332  Sum_probs=92.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC------CCCccceeeEEEeC-CEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH------HRNLVNLVGYCAEK-GQH  183 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~-~~~  183 (235)
                      .+|.+.+.||+|+||.||++.. ..+..||||.++... .....+..|+.++..++      |++++.+.+++... ...
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            4566778999999999999964 457889999986432 22234455666665554      45688888887654 578


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++||++ +++|.+++...  ..+++..+..++.||+.||+|||+ .|||||+
T Consensus       208 ~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrD  257 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTD  257 (467)
T ss_pred             EEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence            8999988 67898888543  568999999999999999999997 5999996

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=5.8e-16  Score=126.90  Aligned_cols=112  Identities=17%  Similarity=0.093  Sum_probs=85.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC--CCCEEEEEEeecC-----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS--TGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..|.+.+.||+|+||.||++...  ++..+|+|.+...     .......|.+|+.+++.++|+|++..+..   .+..+
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~   94 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG   94 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence            34567788999999999999653  4667899987533     12234568999999999999999864332   24579


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++++|.. +  ..   ..   ...++.|++.||+|||++||+||+
T Consensus        95 LVmE~~~G~~L~~-~--~~---~~---~~~~~~~i~~aL~~lH~~gIiHrD  136 (365)
T PRK09188         95 LVRGWTEGVPLHL-A--RP---HG---DPAWFRSAHRALRDLHRAGITHND  136 (365)
T ss_pred             EEEEccCCCCHHH-h--Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCC
Confidence            9999999999963 2  11   11   146788999999999999999996

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.66  E-value=7.6e-17  Score=120.48  Aligned_cols=116  Identities=16%  Similarity=0.300  Sum_probs=97.8

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CCCccceeeEEEeC--CEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEK--GQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~  187 (235)
                      ..+++.+.+|.|.|++||.|. ..+...++||.+++-.   .+...+|+.++..+. ||||+++++...+.  ..+.+|+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            345567789999999999994 5577899999996432   346789999999995 99999999998764  4678999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++.|...+-     ..++..++..++.+++.||.|+|++||+||+
T Consensus       115 E~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRD  157 (338)
T KOG0668|consen  115 EYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRD  157 (338)
T ss_pred             hhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCccccc
Confidence            999998877665     3478888999999999999999999999996

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.66  E-value=7.7e-16  Score=126.39  Aligned_cols=119  Identities=26%  Similarity=0.350  Sum_probs=98.7

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      |.+.+.||+|+||.||++.. .++..+++|.+...  .......+.+|+.+++.++|+||+++.+.+...     ...++
T Consensus         7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l   86 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI   86 (337)
T ss_pred             eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence            45567899999999999964 46889999998653  233345677899999999999999999987543     35799


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+. ++|.+++...  ..+++.....++.|++.||.|||+++++||+
T Consensus        87 v~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~d  133 (337)
T cd07858          87 VYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRD  133 (337)
T ss_pred             EEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            999996 6898888433  5689999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.66  E-value=1.4e-15  Score=125.71  Aligned_cols=119  Identities=24%  Similarity=0.278  Sum_probs=98.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|...+.||+|+||.||++.. .++..+++|.+...  .......+.+|+.+++.++||||+++++.+...      ..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            4566678899999999999964 46889999998643  233345677899999999999999999987543      35


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+.+ +|.+.+...    ++......++.|++.||+|||++|++||+
T Consensus        96 ~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~d  143 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRD  143 (353)
T ss_pred             EEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            7999999964 888887322    78888999999999999999999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.66  E-value=8.9e-16  Score=122.55  Aligned_cols=118  Identities=31%  Similarity=0.385  Sum_probs=100.9

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+.||.|++|.||++.. .++..+++|.+....  ......+..|+.+++.++|+||+++.+.+.+.+..++++||+++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            456799999999999975 367889999986542  23445788899999999999999999999999999999999975


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +|.+++.... ..+++..+..++.|++.||.|||+++++|++
T Consensus        83 -~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  123 (283)
T cd05118          83 -DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRD  123 (283)
T ss_pred             -CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence             8888885432 5689999999999999999999999999985

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.65  E-value=1.4e-15  Score=121.87  Aligned_cols=120  Identities=23%  Similarity=0.293  Sum_probs=96.8

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEEccc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ...+.||+|+||.||++.. .++..+++|.+... .......+.+|+..+.++. |+||+++++.+...+..+++|||+.
T Consensus         7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~   86 (288)
T cd06616           7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD   86 (288)
T ss_pred             HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence            3456799999999999964 45789999998754 2344557889999999985 9999999999988888999999986


Q ss_pred             CCChhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          192 KGSLASH---LYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~---l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      . ++.++   +.......+++.....++.|++.||+|||+ .+++||+
T Consensus        87 ~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~d  133 (288)
T cd06616          87 I-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRD  133 (288)
T ss_pred             C-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccC
Confidence            4 55443   322233568999999999999999999997 5999995

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.8e-15  Score=124.58  Aligned_cols=119  Identities=28%  Similarity=0.317  Sum_probs=96.2

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~  183 (235)
                      ++.+.+.||+|+||.||++.. .++..+|+|.+...  .....+.+.+|+.++..++||||+++.+.+...      ...
T Consensus        18 ~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (345)
T cd07877          18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   97 (345)
T ss_pred             ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccE
Confidence            345567899999999999964 56889999998643  222345678899999999999999999987543      346


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++++ +++|.+++..   ..+++..+..++.|++.||+|||+++++||+
T Consensus        98 ~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d  145 (345)
T cd07877          98 YLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRD  145 (345)
T ss_pred             EEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            7777776 7799888743   3489999999999999999999999999995

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.64  E-value=1.7e-15  Score=122.66  Aligned_cols=122  Identities=28%  Similarity=0.394  Sum_probs=98.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeC--------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--------  180 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------  180 (235)
                      ..+.+.+.||.|+||.||++.. .++..+++|.+....  ......+.+|+.+++.++||||+++++.+...        
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   87 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR   87 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence            3456678899999999999975 357899999986542  22234567899999999999999999887443        


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...++++||+.. +|...+... ...+++..+..++.|++.||+|||++|++||+
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~d  140 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRD  140 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            346899999975 777777432 34689999999999999999999999999985

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.5e-15  Score=123.02  Aligned_cols=134  Identities=22%  Similarity=0.296  Sum_probs=108.9

Q ss_pred             CCCCccCHHHHHH-HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-----C---C
Q 026630           99 SGIPEYSYKDLQK-ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-----H---R  168 (235)
Q Consensus        99 ~~~~~~~~~~l~~-~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~  168 (235)
                      .+..+..+.|... .+|.+.++||.|.|++||++- ....+.||+|+.+.. ....+.-+.||.+|++++     |   .
T Consensus        64 GGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~  142 (590)
T KOG1290|consen   64 GGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKK  142 (590)
T ss_pred             CCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            3444556667666 888888999999999999994 556789999998654 334556789999998872     2   4


Q ss_pred             CccceeeEEEe----CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCcccc
Q 026630          169 NLVNLVGYCAE----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-DGVSCHL  234 (235)
Q Consensus       169 niv~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH-~~~ivHr  234 (235)
                      .||++++.|.-    +.++|||+|++ |-+|..++.....+.++...+.+|++||+.||.||| ..||||=
T Consensus       143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHT  212 (590)
T KOG1290|consen  143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHT  212 (590)
T ss_pred             eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            78999998853    35789999999 558999998888888999999999999999999999 6789994

>PRK10345 hypothetical protein; Provisional

Probab=99.64  E-value=3.4e-15  Score=113.77  Aligned_cols=112  Identities=15%  Similarity=0.210  Sum_probs=86.7

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-----CCCCccceeeEEEeCC---EEE-EEE
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-----HHRNLVNLVGYCAEKG---QHM-LVY  187 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv~  187 (235)
                      .+.||+|+|+.||. ...++.. +||.+........+.+.+|+..++.+     +||||++++|++.++.   ..+ +|+
T Consensus         7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            36799999999996 3333444 68888765444556789999999999     5799999999998763   434 789


Q ss_pred             Ec--ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCccccC
Q 026630          188 VF--MSKGSLASHLYDENYGPLTWNLRVHIALDVARGL-EYLHDGVSCHLF  235 (235)
Q Consensus       188 e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl-~yLH~~~ivHr~  235 (235)
                      ||  +++|+|.+++.+.   .+++.  ..++.|++.++ +|||+++|+||+
T Consensus        85 e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrD  130 (210)
T PRK10345         85 DFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTME  130 (210)
T ss_pred             cCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecC
Confidence            99  5689999999542   35554  35678888877 999999999996

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.63  E-value=7.4e-15  Score=113.06  Aligned_cols=120  Identities=32%  Similarity=0.424  Sum_probs=104.1

Q ss_pred             hhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          115 NFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      .+.+.||.|++|.||++.... +..+++|.+...... ..+.+.+|+..+..++|+|++++++.+......++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            345779999999999997654 789999999766444 567889999999999999999999999888899999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|.+++..... .+++.....++.+++.++.|||+++++|++
T Consensus        82 ~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  123 (225)
T smart00221       82 GDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRD  123 (225)
T ss_pred             CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999854321 278899999999999999999999999985

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.63  E-value=4.6e-15  Score=119.51  Aligned_cols=121  Identities=21%  Similarity=0.328  Sum_probs=97.6

Q ss_pred             HhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCC-hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDS-KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+.+.+.||+|+||.||++.... +..+++|.+.... ......+..|+..+... +||||+++++.+.+....+++|||
T Consensus        16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   95 (296)
T cd06618          16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMEL   95 (296)
T ss_pred             hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeec
Confidence            34567889999999999998754 8899999997542 23344567777766666 599999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++ +|..++... ...+++..+..++.||+.||+|||+ ++++||+
T Consensus        96 ~~~-~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~d  140 (296)
T cd06618          96 MST-CLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRD  140 (296)
T ss_pred             cCc-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCC
Confidence            854 776666432 2468999999999999999999997 6999985

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.62  E-value=5.8e-15  Score=120.92  Aligned_cols=119  Identities=27%  Similarity=0.291  Sum_probs=95.7

Q ss_pred             hhhhhccCCCCceeEEEEEeC-C--CCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe----CCEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-T--GETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE----KGQH  183 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~  183 (235)
                      |.+.+.||+|+||.||++... .  +..+|+|.+...  .....+.+.+|+.++..+ +||||+++++.+..    ....
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            445678999999999999753 3  678999998643  222345678899999999 69999999987532    2456


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+. ++|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus        82 ~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~d  130 (332)
T cd07857          82 YLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRD  130 (332)
T ss_pred             EEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            88889886 5899888433  4689999999999999999999999999995

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=9.9e-17  Score=143.83  Aligned_cols=117  Identities=30%  Similarity=0.378  Sum_probs=99.9

Q ss_pred             hhccCCCCceeEEEE-EeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          117 TTLIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      ...||.|.||.||.+ ..++|...|+|.+...  ..+......+|+.++..++|||+|+++|+-...+..++.||||++|
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            457999999999998 5678999999998644  3333445678999999999999999999998888999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+.+...  ...++....-+..|++.|++|||++|||||+
T Consensus      1320 sLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1320 SLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred             cHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecC
Confidence            999999433  3466666778899999999999999999996

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=3.4e-15  Score=129.57  Aligned_cols=122  Identities=27%  Similarity=0.427  Sum_probs=102.3

Q ss_pred             HhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEe-----CCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE-----KGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~~~l  185 (235)
                      .+.+.+.||+|.+|.||++. ..+++.+|+|+...+... .++...|..+++.. +|||++.++|++..     ++.+||
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            34567899999999999994 567888999988655322 23566788888877 89999999999843     468999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||||.+|+.-+++..-....+.|..+..+++.++.|+.+||.+.++||+
T Consensus        99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD  148 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD  148 (953)
T ss_pred             EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence            99999999999999665566789999999999999999999999999996

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.62  E-value=3.6e-15  Score=116.42  Aligned_cols=106  Identities=22%  Similarity=0.149  Sum_probs=89.3

Q ss_pred             CCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChhhhhhc
Q 026630          123 GAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD  201 (235)
Q Consensus       123 G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  201 (235)
                      |.|+.||++.. .++..+++|.+....     .+..|...+....|||++++++.+...+..+++|||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            78999999964 567899999986542     223445555556799999999999999999999999999999999854


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          202 ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       202 ~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .  ..+++.+...++.|++.||+|||+++++||+
T Consensus        79 ~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  110 (237)
T cd05576          79 F--LNIPEECVKRWAAEMVVALDALHREGIVCRD  110 (237)
T ss_pred             h--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            3  4589999999999999999999999999995

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.61  E-value=7.9e-16  Score=117.84  Aligned_cols=119  Identities=22%  Similarity=0.312  Sum_probs=100.4

Q ss_pred             hhhhccCCCCceeEEEE-EeCCCCEEEEEEeecC--------ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEE
Q 026630          115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD--------SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~-~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  184 (235)
                      .-.+.+|.|..+.|.++ ...++...++|.+...        .....++-..|+.+++++ .||+|+.+.+.++.+.+.+
T Consensus        20 ~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~F   99 (411)
T KOG0599|consen   20 EPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVF   99 (411)
T ss_pred             ChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhh
Confidence            34467999999988887 4457888999988532        112234567889999998 8999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.|+.|.|.++|.+  ...++++....+++|+.+|++|||.++||||+
T Consensus       100 lVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~IVHRD  148 (411)
T KOG0599|consen  100 LVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARNIVHRD  148 (411)
T ss_pred             hhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999943  46689999999999999999999999999996

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.61  E-value=4.5e-16  Score=117.38  Aligned_cols=127  Identities=24%  Similarity=0.295  Sum_probs=109.1

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe-----CCE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-----KGQ  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~  182 (235)
                      +...+|++.+.||+|+|+-|+.++ ..++..+|+|.+........+..++|++..++++|||++++++....     ...
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            344567788999999999999995 66888999999988777777788999999999999999999887633     346


Q ss_pred             EEEEEEcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      .|++++|...|+|.+.+...  ....+++.+.+.++.+|++||++||+..  +.||+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D  154 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD  154 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence            89999999999999998542  2235899999999999999999999999  99996

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.61  E-value=2.8e-15  Score=123.34  Aligned_cols=118  Identities=26%  Similarity=0.333  Sum_probs=98.0

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE------EE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ------HM  184 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~  184 (235)
                      |.+.+.||+|+||.||++... ++..+++|.+...  .......+.+|+.+++.++|||++++.+.+...+.      .+
T Consensus        17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   96 (343)
T cd07851          17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY   96 (343)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence            455678999999999999763 5788999988643  22334567789999999999999999988765544      89


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+ +++|.+++..   ..+++..+..++.|++.||+|||++|++||+
T Consensus        97 lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~d  143 (343)
T cd07851          97 LVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRD  143 (343)
T ss_pred             EEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999998 5699998843   4589999999999999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.60  E-value=1.3e-14  Score=109.59  Aligned_cols=115  Identities=21%  Similarity=0.144  Sum_probs=86.8

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChh--c------------------------HHHHHHHHHHHccCCCCCc
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ--G------------------------EKEFQTEVMLLGRLHHRNL  170 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni  170 (235)
                      ...||+|+||.||++...+|..||+|.++.....  .                        ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3579999999999998768999999998754211  0                        1123578888999999988


Q ss_pred             cceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       171 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      ..........  .+++|||++++++......  ...++..+...++.|++.++.|||+ +||+||+
T Consensus        82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrD  143 (190)
T cd05145          82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGD  143 (190)
T ss_pred             CCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            6554443332  4799999998765443211  2357788899999999999999999 9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.60  E-value=6.8e-15  Score=125.54  Aligned_cols=125  Identities=21%  Similarity=0.316  Sum_probs=90.5

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-----------------CCCCEEEEEEeecCChhcHHHH--------------HHHH
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-----------------STGETVAVKVLATDSKQGEKEF--------------QTEV  159 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e~  159 (235)
                      ...+.+.++||+|+||.||+|..                 ..++.||||.+........++|              ..|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            34556678999999999999953                 2346799999865433222333              3466


Q ss_pred             HHHccCCCCCc-----cceeeEEEe--------CCEEEEEEEcccCCChhhhhhcCC----------------------C
Q 026630          160 MLLGRLHHRNL-----VNLVGYCAE--------KGQHMLVYVFMSKGSLASHLYDEN----------------------Y  204 (235)
Q Consensus       160 ~~l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~----------------------~  204 (235)
                      .++.+++|.++     +.++++|..        .+..++|+||+++++|.++++...                      .
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            66777766544     566676642        346799999999999999885321                      1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          205 GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       205 ~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++..+..++.|++.||+|||+++|+||+
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrD  334 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRD  334 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            1245677889999999999999999999996

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.60  E-value=3.9e-14  Score=107.38  Aligned_cols=115  Identities=32%  Similarity=0.531  Sum_probs=100.2

Q ss_pred             cCCCCceeEEEEEeCC-CCEEEEEEeecCChh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChhh
Q 026630          120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS  197 (235)
Q Consensus       120 lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~  197 (235)
                      ||+|.+|.||++.... +..+++|.+...... ....+.+|+..++.+.|++++++.+.+......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998643 889999998765332 34678999999999999999999999998889999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          198 HLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       198 ~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++.... ..+++..+..++.+++.+++|||+++++|++
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d  117 (215)
T cd00180          81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRD  117 (215)
T ss_pred             HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            985432 3588999999999999999999999999985

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.59  E-value=9.8e-15  Score=120.11  Aligned_cols=118  Identities=27%  Similarity=0.359  Sum_probs=95.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~  183 (235)
                      ++...+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.+++.++||||+++.+++...      ...
T Consensus        16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   95 (342)
T cd07879          16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDF   95 (342)
T ss_pred             ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceE
Confidence            344567899999999999974 46889999998643  222345678999999999999999999988643      246


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+.. +|..++.    ..+++..+..++.|++.||+|||+++++||+
T Consensus        96 ~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~d  142 (342)
T cd07879          96 YLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRD  142 (342)
T ss_pred             EEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            899999964 7776651    2488899999999999999999999999995

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=1.1e-15  Score=128.75  Aligned_cols=116  Identities=22%  Similarity=0.228  Sum_probs=100.9

Q ss_pred             hccCCCCceeEEEEE-eCCCCEEEEEEeecCChh---cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.||-|+||+|.++. .++...+|.|.+++.+..   .......|-.+|+..+.+.||+++-.|.+.+.+|+||||++||
T Consensus       635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG  714 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG  714 (1034)
T ss_pred             eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence            469999999999984 455667899999876433   3345678888999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+-.+|.+  .+.|.+..+..++.++.+|+++.|++|+|||+
T Consensus       715 DmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmGFIHRD  754 (1034)
T KOG0608|consen  715 DMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMGFIHRD  754 (1034)
T ss_pred             cHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            99999853  36789999999999999999999999999996

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.59  E-value=7.9e-16  Score=119.10  Aligned_cols=113  Identities=24%  Similarity=0.276  Sum_probs=94.5

Q ss_pred             hccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHc-cCCCCCccceeeEEEe----CCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLG-RLHHRNLVNLVGYCAE----KGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~~~~~lv~e~~~  191 (235)
                      ++||-|-.|.|..+. ..+++.+|+|.+.+..     ...+|++.-- .-.|||||++++++..    ...+.+|||+++
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me  142 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME  142 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence            679999999999984 4578889999986442     2245666533 3379999999998854    356789999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+|+.-+.+....+|++.++-.+++||+.|++|||+++|.||+
T Consensus       143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRD  186 (400)
T KOG0604|consen  143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRD  186 (400)
T ss_pred             chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhcc
Confidence            99999999877778899999999999999999999999999996

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.56  E-value=5.1e-15  Score=132.34  Aligned_cols=118  Identities=25%  Similarity=0.333  Sum_probs=91.0

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--------------
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--------------  180 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------------  180 (235)
                      .++||+|+||.||+++ .-+|+.+|||.++.. +........+|+.++++++|||||+++..+...              
T Consensus       484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~  563 (1351)
T KOG1035|consen  484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDS  563 (1351)
T ss_pred             HHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccch
Confidence            4679999999999995 348999999999765 334445678999999999999999987432000              


Q ss_pred             --------------------------------------------------------------------------------
Q 026630          181 --------------------------------------------------------------------------------  180 (235)
Q Consensus       181 --------------------------------------------------------------------------------  180 (235)
                                                                                                      
T Consensus       564 ~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d  643 (1351)
T KOG1035|consen  564 ESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILD  643 (1351)
T ss_pred             hhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccC
Confidence                                                                                            


Q ss_pred             -------------------------CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 -------------------------GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 -------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                               ..+|+=||||+.-.|.++++++.... .......++++|++||+|+|++|+|||+
T Consensus       644 ~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~giIHRD  722 (1351)
T KOG1035|consen  644 DTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQGIIHRD  722 (1351)
T ss_pred             cchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhCceeecc
Confidence                                     01467788888877777775543211 3556789999999999999999999996

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.56  E-value=4.3e-16  Score=131.60  Aligned_cols=122  Identities=26%  Similarity=0.381  Sum_probs=105.9

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+|.+...+|.|.||.||+++ ...+...|+|.++-+..........|+.+++..+||||+.++|.+...+.+++.||||
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            344556679999999999996 4567889999998665555566788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+|+|.+.-+-  .+++++.++..+++..++|+.|||++|-+||+
T Consensus        95 gggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRd  137 (829)
T KOG0576|consen   95 GGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRD  137 (829)
T ss_pred             CCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCccccc
Confidence            99999887643  36799999999999999999999999999996

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.55  E-value=8.3e-14  Score=108.14  Aligned_cols=110  Identities=28%  Similarity=0.396  Sum_probs=96.4

Q ss_pred             CceeEEEEEeC-CCCEEEEEEeecCChhc-HHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChhhhhhc
Q 026630          124 AFGPVYKAQMS-TGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD  201 (235)
Q Consensus       124 ~~g~v~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  201 (235)
                      +||.||++... ++..+++|.+....... .+.+.+|+..++.++|+|++++.+.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            47899999765 47899999997654433 67899999999999999999999999998999999999999999999854


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          202 ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       202 ~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..  .+++.....++.+++.++.|||+.+++|++
T Consensus        81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~  112 (244)
T smart00220       81 RG--RLSEDEARFYARQILSALEYLHSNGIIHRD  112 (244)
T ss_pred             cc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence            32  388999999999999999999999999984

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.55  E-value=3.5e-15  Score=116.16  Aligned_cols=121  Identities=22%  Similarity=0.283  Sum_probs=97.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-C--C--CCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-S--T--GETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHML  185 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~--~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l  185 (235)
                      |+....||+|.||.||++.- +  +  ...+|+|.++...  ..-.....+|+.+++.++|||++++..++.. +...++
T Consensus        26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l  105 (438)
T KOG0666|consen   26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWL  105 (438)
T ss_pred             hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEE
Confidence            44567799999999999942 2  2  2368899886441  1223456799999999999999999999876 778999


Q ss_pred             EEEcccCCChhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYD---ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||.+. ||.+.++-   .....++...+..+..||+.|+.|||++=|+||+
T Consensus       106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRD  157 (438)
T KOG0666|consen  106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRD  157 (438)
T ss_pred             Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeecc
Confidence            9999998 99998852   2234577888899999999999999999999996

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.1e-15  Score=123.14  Aligned_cols=126  Identities=25%  Similarity=0.313  Sum_probs=103.0

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  182 (235)
                      .+...++++..+||+|+||.|.+++. .+...+|||.++++   .....+--+.|-++|+-. +-|.++++..++..-+.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            45556678889999999999999964 34568999998765   222333345666777666 67889999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+||||+.+|||-..+.  ..+.|.++.++.+|.+||-||-|||++|||.|+
T Consensus       425 LyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRD  475 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRD  475 (683)
T ss_pred             eeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence            999999999999988884  346688899999999999999999999999985

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=1.1e-13  Score=106.12  Aligned_cols=111  Identities=14%  Similarity=0.193  Sum_probs=91.0

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCCh--------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSK--------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.||+|++|.||++.. .+..+++|.......        .....+.+|+..+..+.|++++....++.+.+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999987 677899997654321        1123577899999999999998888777777788999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...     .. ....++.+++.+|.++|+.+++||+
T Consensus        81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~D  120 (211)
T PRK14879         81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGD  120 (211)
T ss_pred             eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999999998432     22 7788999999999999999999986

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2e-14  Score=116.98  Aligned_cols=123  Identities=22%  Similarity=0.299  Sum_probs=99.3

Q ss_pred             HHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCC-------hhcHHHHHHHHHHHccCCCCCccceeeEEE-eC
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDS-------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCA-EK  180 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~  180 (235)
                      ...+|-+..+||+|+|+.||++. +...+.||+|+-....       ....+...+|.++-+.++||.||++++++. +.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            34455556789999999999994 4567889999854321       122345678999999999999999999984 56


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccc
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHL  234 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr  234 (235)
                      +..|-|+|||++.||.-||...  ..+++.++..|+.||+.||.||....  |||=
T Consensus       541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHY  594 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHY  594 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeee
Confidence            7889999999999999999654  56899999999999999999998765  7773

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.52  E-value=7.8e-15  Score=119.29  Aligned_cols=118  Identities=26%  Similarity=0.340  Sum_probs=101.0

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      .+||+|+||.|+-++. .+|.-+|.|.+.+.   ........++|-.++.+++.+.||.+--.|++.+.+++|+..|+||
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG  270 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG  270 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence            5799999999999864 46788888887543   1222334578888999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||...|..-....|++..++.+|.+|+.||++||+.+||.|+
T Consensus       271 DLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRD  312 (591)
T KOG0986|consen  271 DLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRD  312 (591)
T ss_pred             ceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeecc
Confidence            999988765556799999999999999999999999999996

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.52  E-value=4.7e-15  Score=113.68  Aligned_cols=125  Identities=22%  Similarity=0.395  Sum_probs=103.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +.....++..+|.+...|+.|+|+| +|..+++|.+...  ...-.++|..|...++-+.||||+.++|.|.....+.+|
T Consensus       187 id~~~lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~i  265 (448)
T KOG0195|consen  187 IDVSSLNLITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVII  265 (448)
T ss_pred             cchhhhhhhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEe
Confidence            3334445677899999999999999 5555667777543  334456899999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccc
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV-SCHL  234 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-ivHr  234 (235)
                      ..||+.|+|...|+.......+-.++++++.+|++||+|||+.. ++-|
T Consensus       266 sq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr  314 (448)
T KOG0195|consen  266 SQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPR  314 (448)
T ss_pred             eeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhh
Confidence            99999999999999877777888999999999999999999865 4433

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.52  E-value=6.7e-14  Score=121.10  Aligned_cols=113  Identities=21%  Similarity=0.192  Sum_probs=90.6

Q ss_pred             hccCCCCcee-EEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          118 TLIGQGAFGP-VYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       118 ~~lg~G~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      +++|.|+-|. ||+|.+ +++.||||.+-.+..   .-..+|+..+..- +||||+++++.-.++.+.|+..|.|.. +|
T Consensus       515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL  589 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SL  589 (903)
T ss_pred             HHcccCCCCcEEEEEee-CCceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hH
Confidence            6789998876 799999 889999998854322   2346899988887 799999999999999999999999966 99


Q ss_pred             hhhhhcC-CCCC-CCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDE-NYGP-LTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~-~~~~-~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++... .... ......+....|++.||++||+.+||||+
T Consensus       590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRD  631 (903)
T KOG1027|consen  590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRD  631 (903)
T ss_pred             HHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccccccc
Confidence            9999552 1001 11134578889999999999999999996

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.49  E-value=1.8e-13  Score=105.00  Aligned_cols=119  Identities=13%  Similarity=0.119  Sum_probs=93.6

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcH---HH------HHHHHHHHccCCCCCccceeeE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE---KE------FQTEVMLLGRLHHRNLVNLVGY  176 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~---~~------~~~e~~~l~~l~h~niv~~~~~  176 (235)
                      .+++...++...+++|.|+||.||+... ++..+++|.+++......   ..      +.+|+..+.++.||+|..+...
T Consensus        25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         25 FDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             HHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            4566777777889999999999999866 577899999975522222   22      5789999999999999999887


Q ss_pred             EEeC--------CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAEK--------GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +...        +..+++|||++|.+|.++..      ++.    ....+++.+|..+|+.|++||+
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~D  160 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGD  160 (232)
T ss_pred             eeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCC
Confidence            6533        35789999999999987741      222    2456999999999999999996

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.49  E-value=1.9e-13  Score=103.81  Aligned_cols=107  Identities=20%  Similarity=0.223  Sum_probs=84.4

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecCCh--------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSK--------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .||+|+||.||++.+ ++..+++|.......        .....+.+|+.++..+.|+++......+...+..+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            389999999999986 678899998653211        11245778999999998887766666666666678999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++....     .    .++.+++.+|.+||+.+++||+
T Consensus        80 ~g~~l~~~~~~~~-----~----~~~~~i~~~l~~lH~~gi~H~D  115 (199)
T TIGR03724        80 EGKPLKDVIEEGN-----D----ELLREIGRLVGKLHKAGIVHGD  115 (199)
T ss_pred             CCccHHHHHhhcH-----H----HHHHHHHHHHHHHHHCCeecCC
Confidence            9999998873321     1    7899999999999999999986

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.48  E-value=2.7e-13  Score=109.20  Aligned_cols=125  Identities=18%  Similarity=0.194  Sum_probs=86.5

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecCChhc-----------HHHHHHHHHHHccCCCCCccc
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATDSKQG-----------EKEFQTEVMLLGRLHHRNLVN  172 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~  172 (235)
                      ++...+|.+.+.||+|+||.||++....    +..+++|.........           ......+...+..++|+|+++
T Consensus         8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~   87 (294)
T PHA02882          8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK   87 (294)
T ss_pred             ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence            4444567788899999999999997543    3456666543221111           011223344566779999999


Q ss_pred             eeeEEEeCC----EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          173 LVGYCAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       173 ~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++....    ..++++|++.. ++.+.+...  ..+++..+..++.|++.||+|||+++++||+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrD  151 (294)
T PHA02882         88 YYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGD  151 (294)
T ss_pred             EEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            998765432    44677887644 666665322  3357788899999999999999999999996

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=5.1e-14  Score=110.96  Aligned_cols=124  Identities=18%  Similarity=0.254  Sum_probs=100.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~  184 (235)
                      ...++++..+||.|+|++|..++. ++.+.+|+|.++++   +.........|-.+.... +||.+|.+..+|.....++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            334456678999999999999864 56788999998764   333333445565555555 8999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.||+++|+|--.+.++  ..+++..+..+..+|+.||.|||++|||.|+
T Consensus       328 fvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrd  376 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRD  376 (593)
T ss_pred             EEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeee
Confidence            999999999998777554  4589999999999999999999999999985

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=1.8e-13  Score=113.86  Aligned_cols=124  Identities=19%  Similarity=0.216  Sum_probs=103.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ....|...++||+|+.+.||++...+.+.+++|.+...  +......|..|+..|.+| .|.+|++++++-..++.+|+|
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            34456667899999999999998767778888876533  667778899999999999 799999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||-+. ||...|........+| .+..+..||+.++.++|++||||-+
T Consensus       439 mE~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~gIVHSD  485 (677)
T KOG0596|consen  439 MECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHGIVHSD  485 (677)
T ss_pred             eecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhceeecC
Confidence            998755 9999996654433344 6788999999999999999999953

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.47  E-value=2.2e-13  Score=104.45  Aligned_cols=120  Identities=15%  Similarity=0.247  Sum_probs=96.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeE-EEeCCEEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY-CAEKGQHMLVYV  188 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e  188 (235)
                      ..+++.+.+|+|.||.+.+++.+. ...+++|.++.. ....++|.+|..---.| .|.||+.-++. |...+...+++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            346778899999999999997643 467888888644 23356899998755555 68999987665 566778889999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.|||.+-+..   ..+.+.....++.|++.|++|+|++++|||+
T Consensus       103 ~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRd  146 (378)
T KOG1345|consen  103 FAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRD  146 (378)
T ss_pred             cCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcc
Confidence            9999999987732   3477778889999999999999999999996

>smart00090 RIO RIO-like kinase

Probab=99.47  E-value=7.2e-13  Score=103.24  Aligned_cols=116  Identities=18%  Similarity=0.105  Sum_probs=85.5

Q ss_pred             hhhhhccCCCCceeEEEEE--eCCCCEEEEEEeecCChh------------------------cHHHHHHHHHHHccCCC
Q 026630          114 CNFTTLIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQ------------------------GEKEFQTEVMLLGRLHH  167 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~h  167 (235)
                      +.+.+.||+|+||.||++.  ..+|..||+|.++.....                        ....+..|+..+.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4566889999999999997  568899999998743210                        01235689999998865


Q ss_pred             CC--ccceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-ccccC
Q 026630          168 RN--LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV-SCHLF  235 (235)
Q Consensus       168 ~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-ivHr~  235 (235)
                      .+  ++.+++   . ...++||||+++++|......  ...+.......++.||+.++.|||++| ++||+
T Consensus       110 ~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~D  174 (237)
T smart00090      110 AGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEGELVHGD  174 (237)
T ss_pred             cCCCCCeeeE---e-cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCC
Confidence            33  333333   2 234799999999888765422  234556667899999999999999999 99996

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=3.1e-15  Score=113.42  Aligned_cols=117  Identities=29%  Similarity=0.415  Sum_probs=94.3

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--------CCEEEE
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--------KGQHML  185 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~~~~~l  185 (235)
                      ..+||+|.||+||+++. ++++.|++|..--+  ....-..-++|+.++..+.|+|++.++..|..        ....|+
T Consensus        22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl  101 (376)
T KOG0669|consen   22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL  101 (376)
T ss_pred             HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence            35699999999999953 46777887765322  22223356899999999999999999988743        235899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+. ||...|. .....++..++..++.++..||.|+|++.|+||+
T Consensus       102 Vf~~ceh-DLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRD  149 (376)
T KOG0669|consen  102 VFDFCEH-DLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRD  149 (376)
T ss_pred             eHHHhhh-hHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhc
Confidence            9999988 9999883 3446799999999999999999999999999996

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.46  E-value=3.1e-13  Score=107.82  Aligned_cols=131  Identities=21%  Similarity=0.342  Sum_probs=107.2

Q ss_pred             ccCHHHHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC--C----Cccceee
Q 026630          103 EYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--R----NLVNLVG  175 (235)
Q Consensus       103 ~~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~~~~  175 (235)
                      .+...|....++.+.+.+|+|.||.|..+-. ..+..||+|+++.- ....++-.-|++++.++.+  |    -++.+.+
T Consensus        80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             EEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence            3455677788888999999999999999843 34789999998532 3344566789999998832  2    3566677


Q ss_pred             EEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       176 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++.-.+..|+|+|.+ |-++.++|..++..+++..++..|+.|++.+++|||+.+++|-+
T Consensus       159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTD  217 (415)
T KOG0671|consen  159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTD  217 (415)
T ss_pred             hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecC
Confidence            787889999999988 44999999888888999999999999999999999999999954

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.46  E-value=6.1e-13  Score=115.60  Aligned_cols=108  Identities=18%  Similarity=0.170  Sum_probs=85.6

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEe-ecC-C------hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVL-ATD-S------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~-~~~-~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+.||+|+||.||++.+... .+++|.. ... .      ....+.+.+|+.++..++|++++.....+.+.+..+++||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             cceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence            57799999999999987433 3444432 211 1      1123468899999999999999888777777777889999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.          ....++.|++.+|.|||+++++||+
T Consensus       417 ~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrD  453 (535)
T PRK09605        417 YIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGD  453 (535)
T ss_pred             ecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCC
Confidence            999999998883          3467899999999999999999996

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.43  E-value=1.2e-12  Score=106.88  Aligned_cols=122  Identities=20%  Similarity=0.251  Sum_probs=96.8

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCC--CEEEEEEeecCChhcHHHHHHHHHHHccCCC----CCccceeeEE-EeCCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTG--ETVAVKVLATDSKQGEKEFQTEVMLLGRLHH----RNLVNLVGYC-AEKGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l  185 (235)
                      .|.+.+.||+|+||.||.+.....  ..+|+|............+..|..++..+..    +++..+++.. ....+.++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            567788999999999999975443  4788888765432222256778888877752    5888888877 46778899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+.+ +-+|.++........|+....+.++.|++.+|++||+.|++||+
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRD  147 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRD  147 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCC
Confidence            99988 66999987554456799999999999999999999999999996

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.39  E-value=5.9e-13  Score=107.32  Aligned_cols=114  Identities=23%  Similarity=0.288  Sum_probs=98.1

Q ss_pred             hhhhccCCCCceeEEEEEeC----CCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEc
Q 026630          115 NFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...++||.|.|+.||++...    ..+.||+|.+......  .....|+++|..+ .+.||+.+.+++..++...+|+||
T Consensus        39 ~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~  116 (418)
T KOG1167|consen   39 KVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPY  116 (418)
T ss_pred             hhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecc
Confidence            45688999999999999642    4578999998654322  3578999999998 799999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+.-+..++..     .++..++..+...+..||+|+|++|||||+
T Consensus       117 ~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRD  157 (418)
T KOG1167|consen  117 FEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNGIVHRD  157 (418)
T ss_pred             cCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccCccccC
Confidence            99988888883     367889999999999999999999999996

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=3.2e-14  Score=117.28  Aligned_cols=117  Identities=19%  Similarity=0.178  Sum_probs=100.5

Q ss_pred             hhccCCCCceeEEEEEeCCC-CEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          117 TTLIGQGAFGPVYKAQMSTG-ETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ...||-|+||.|=+...... ...|+|++++.   +....+....|-.+|...+.|.||+++-.|.++...|++||-|-+
T Consensus       425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            45699999999998876333 34788888654   444555677888999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|+..|++  ++.|+......++..+++|++|||++|||.|+
T Consensus       505 GElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRD  545 (732)
T KOG0614|consen  505 GELWTILRD--RGSFDDYTARFYVACVLEAFEYLHRKGIIYRD  545 (732)
T ss_pred             chhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHhcCceecc
Confidence            999999954  46799999999999999999999999999996

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=2.6e-14  Score=109.70  Aligned_cols=115  Identities=24%  Similarity=0.339  Sum_probs=94.0

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-----EEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-----QHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~  189 (235)
                      +.||-|+||.||..+. ++|+.|+.|.+..-  .-...+.+.+|+.++.-++|.|+++.++......     +.|++.|.
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            5699999999999965 46888999887532  3334567889999999999999999998865542     45788888


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.. ||...+.+.  ++++.....-+.+||++||.|||+.+|.||+
T Consensus       139 mQS-DLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRD  181 (449)
T KOG0664|consen  139 MQS-DLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTANILHRD  181 (449)
T ss_pred             HHh-hhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhcchhhcc
Confidence            855 888888554  5688888888999999999999999999996

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.36  E-value=2.4e-12  Score=112.23  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-C----CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeE------EEeC
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-T----GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY------CAEK  180 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~~~  180 (235)
                      ..|.+.+.||+|+||.||+|... +    +..+|+|.+......  +.+..+.  +....+.++..+...      +...
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNER--VRRACPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHHH--HHhhchhhHHHHHHhhhcccccccC
Confidence            34566788999999999999763 4    678999987543211  1111111  111122222222211      2345


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYG------------------PLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~------------------~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...++++||+++++|.+++......                  ......+..++.||+.||+|||+++|+||+
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence            6789999999999999998543210                  011223557999999999999999999996

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.34  E-value=1.3e-11  Score=93.79  Aligned_cols=116  Identities=17%  Similarity=0.092  Sum_probs=84.5

Q ss_pred             HHHHHH--hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChh----------------------cHHHHHHHHHHHc
Q 026630          108 DLQKAT--CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ----------------------GEKEFQTEVMLLG  163 (235)
Q Consensus       108 ~l~~~~--~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~  163 (235)
                      ++....  +.+.+.||+|+||.||++...+++.++||.++.....                      ....+..|...+.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            444444  4556889999999999998778999999987643210                      1123567888888


Q ss_pred             cCCCCC--ccceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          164 RLHHRN--LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       164 ~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+.|++  ++..++    ....+++|||+++++|.....        ......++.+++.++.++|+.|++||+
T Consensus        89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~D  150 (198)
T cd05144          89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGD  150 (198)
T ss_pred             HHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCC
Confidence            887774  333332    245689999999999876541        123467889999999999999999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.29  E-value=8.1e-12  Score=94.47  Aligned_cols=123  Identities=22%  Similarity=0.289  Sum_probs=96.7

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv  186 (235)
                      +....+.+.+.||+|+||.+|.|. ...|..||+|.-.....  ...+.-|..+...++ ...|+.+.-+......-.+|
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV   89 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV   89 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence            444456677899999999999994 56799999998654321  124567778877774 46777777666777778899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||.. +-+|.++..- +...|+....+.+|.|++.-++|+|.+++|||+
T Consensus        90 MdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRD  136 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRD  136 (341)
T ss_pred             eecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhcccccc
Confidence            9998 5588887743 345699999999999999999999999999996

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.29  E-value=3.8e-12  Score=107.63  Aligned_cols=117  Identities=20%  Similarity=0.292  Sum_probs=92.8

Q ss_pred             HHhhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ..+.+...+|.|+|+.+-.+. ...+...++|.+.+...    +-.+|+.++... +|||++++.+.+.+....++|||.
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~  397 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL  397 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence            344555669999999998885 45677889999865411    234566554444 899999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.++-+.+.++...   ....++..|+.+|+.++.|||++|+|||+
T Consensus       398 l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRD  440 (612)
T KOG0603|consen  398 LDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRD  440 (612)
T ss_pred             ccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecC
Confidence            99999888875432   23377788999999999999999999997

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.26  E-value=5.2e-11  Score=89.89  Aligned_cols=105  Identities=12%  Similarity=0.041  Sum_probs=79.9

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChh----cHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEccc
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ----GEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ...|+.|+||.|+.+.. .+..++.+.+......    ....+.+|+.+|+++ +|++++.++++    +..+++|||+.
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            45699999999998765 6777877766543221    122578999999999 45889998875    34689999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+|.+.+..         ....+..|++.+|+++|++||+||+
T Consensus        82 G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~GIvHrD  116 (218)
T PRK12274         82 GAAMYQRPPR---------GDLAYFRAARRLLQQLHRCGVAHND  116 (218)
T ss_pred             CccHHhhhhh---------hhHHHHHHHHHHHHHHHHCcCccCC
Confidence            9888654310         1145778999999999999999996

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.26  E-value=2e-11  Score=96.29  Aligned_cols=118  Identities=19%  Similarity=0.202  Sum_probs=94.4

Q ss_pred             hhhhhccCCCCceeEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +.++++||+|+||.++.|. +-++.+||||.-+..+  ....+..|.+..+.| ..++|+..+-+-.....-.||+|++ 
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-  106 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-  106 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence            4567899999999999994 5589999999865432  223566788888777 6788888776555556678999988 


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +-+|.++.. -+...|+.+.++.+|.|++.-++|+|++++|.|+
T Consensus       107 GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRD  149 (449)
T KOG1165|consen  107 GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRD  149 (449)
T ss_pred             CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcceeecc
Confidence            558887763 3456799999999999999999999999999986

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.24  E-value=1.4e-12  Score=99.78  Aligned_cols=118  Identities=25%  Similarity=0.316  Sum_probs=92.6

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecC-ChhcHHHHHHHHHH-HccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD-SKQGEKEFQTEVML-LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      ...||.|+||.|++-. ...|+..|||.++.. ...+.+.++.|..+ ++.-++||||+++|.+..++..|+-||+|+- 
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-  147 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-  147 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence            3569999999999974 457889999999876 44667788999886 5555899999999999888889999999954 


Q ss_pred             Chhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCccccC
Q 026630          194 SLASHL---YDENYGPLTWNLRVHIALDVARGLEYLH-DGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l---~~~~~~~~~~~~~~~~~~qi~~gl~yLH-~~~ivHr~  235 (235)
                      +|..+-   ++-....+++.-.-.++...+.||.||- ..+||||+
T Consensus       148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRD  193 (361)
T KOG1006|consen  148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRD  193 (361)
T ss_pred             hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhcc
Confidence            554332   2222344777777788888999999995 77899996

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.17  E-value=6.9e-11  Score=87.55  Aligned_cols=118  Identities=23%  Similarity=0.332  Sum_probs=94.4

Q ss_pred             hhccCCCCceeEEEEE-eCCCCEEEEEEeecC-ChhcHHHHHHHHHH-HccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          117 TTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD-SKQGEKEFQTEVML-LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      ..-||+|+||.|-+-+ ...|...|+|.++.. ..+..+..++|+.+ ++...+|.+|.|+|...+....++-||.|.- 
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-
Confidence            4559999999987664 457889999999866 55556678899986 4555899999999999898999999999955 


Q ss_pred             Chhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          194 SLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +|..+-+.  ...+..++.-.-++|..+..||.|||+ ..+|||+
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRD  174 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRD  174 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhcc
Confidence            77665432  234567888888999999999999995 5799996

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.17  E-value=2.3e-10  Score=86.01  Aligned_cols=112  Identities=22%  Similarity=0.225  Sum_probs=74.0

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChh--cHHHH----------------------HHHHHHHccCCCCC--c
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ--GEKEF----------------------QTEVMLLGRLHHRN--L  170 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~n--i  170 (235)
                      .+.||+|+||.||++...+++.|++|.++.....  ....+                      ..|...+..+.+.+  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3579999999999998767899999998754211  11111                      24555555553332  3


Q ss_pred             cceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       171 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +..++.    ...+++|||++++++....-....  .. .....++.+++.++.++|+ .+++||+
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~D  140 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGD  140 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence            333332    245899999999655422111110  11 5578899999999999999 9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.15  E-value=9.3e-10  Score=88.69  Aligned_cols=119  Identities=32%  Similarity=0.482  Sum_probs=99.3

Q ss_pred             hhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChh---cHHHHHHHHHHHccCCCC-CccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHR-NLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+.+.||.|.|+.||.+...  ..+++|.+......   ....+.+|...+..+.|+ +++.+...+......+++++++
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            34567999999999999874  77889998765222   466899999999999888 7999999997777789999999


Q ss_pred             cCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENY-GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++.+++..... ..++......+..|++.++.|+|+.+++||+
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd  126 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRD  126 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            99999977743221 2588889999999999999999999999996

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.11  E-value=5.9e-10  Score=80.24  Aligned_cols=107  Identities=21%  Similarity=0.228  Sum_probs=86.4

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC--CCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--RNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .+.|+.|.++.||++... +..+++|.......  ...+..|...+..++|  .+++++++.....+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            356899999999999874 47899998865433  4578899999999966  588888888877778999999998877


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CccccC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG---VSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~---~ivHr~  235 (235)
                      +..+         +......++.+++.++++||..   +++|++
T Consensus        80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~D  114 (155)
T cd05120          80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGD  114 (155)
T ss_pred             cccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecC
Confidence            6543         4566678899999999999985   699985

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.10  E-value=1.2e-09  Score=85.41  Aligned_cols=110  Identities=15%  Similarity=0.169  Sum_probs=80.2

Q ss_pred             hccC-CCCceeEEEEEeCCCCEEEEEEeecCC-------------hhcHHHHHHHHHHHccCCCCCc--cceeeEEEeC-
Q 026630          118 TLIG-QGAFGPVYKAQMSTGETVAVKVLATDS-------------KQGEKEFQTEVMLLGRLHHRNL--VNLVGYCAEK-  180 (235)
Q Consensus       118 ~~lg-~G~~g~v~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~-  180 (235)
                      ..|| .|+.|.||.... .+..+++|.+....             ......+.+|+.++..++|+++  +..++..... 
T Consensus        37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4587 788999999987 47788888875321             1223457889999999988875  5666654322 


Q ss_pred             C---EEEEEEEcccC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 G---QHMLVYVFMSK-GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .   ..++|+|++++ .+|.+++..   .+++..    .+.+|+.++.+||++||+||+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~GI~HrD  167 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAGVYHAD  167 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCCCCCCC
Confidence            2   23599999997 689888843   234443    357899999999999999996

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.08  E-value=1.9e-10  Score=88.64  Aligned_cols=118  Identities=21%  Similarity=0.304  Sum_probs=92.5

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +...||.|..|.||+... ..|...|||..+.. ...+.+.++..+.++..- ++|.||+.+|+|..+...++-||.|..
T Consensus        96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~  175 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST  175 (391)
T ss_pred             hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence            345699999999999975 45788999999876 445556788888765544 699999999999998888888888743


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-DGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH-~~~ivHr~  235 (235)
                       -+..+++ ...+++++.-+-++...++.||.||. +++||||+
T Consensus       176 -C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRD  217 (391)
T KOG0983|consen  176 -CAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRD  217 (391)
T ss_pred             -HHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecc
Confidence             3333443 23466888888899999999999995 67799996

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.07  E-value=1e-10  Score=105.17  Aligned_cols=117  Identities=22%  Similarity=0.256  Sum_probs=87.4

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC---CCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH---HRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +.+.+.+|+|+||.||+|...++..||+|.-.+....+   |--=.+++.+|+   -+.|..+...+...+.-++++||.
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             EEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence            33446799999999999987779999999976554332   111112233333   233444444445566678999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.|+|.+++.  ..+..++...+.++.|++.-++.||..+|||.+
T Consensus       777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgD  819 (974)
T KOG1166|consen  777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGD  819 (974)
T ss_pred             ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceeccc
Confidence            9999999994  456789999999999999999999999999975

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.06  E-value=4.5e-10  Score=93.50  Aligned_cols=137  Identities=20%  Similarity=0.207  Sum_probs=111.6

Q ss_pred             ccCCCCCccCHHHHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC------C
Q 026630           96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH------R  168 (235)
Q Consensus        96 ~~~~~~~~~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~  168 (235)
                      ....+...+.+.++...+|.+....|+|-|+.|.+|.. ..+..||||+++... -..+.=+.|+++|++|+.      -
T Consensus       416 dDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  416 DDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             ccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhh
Confidence            33445555678899999999989999999999999964 457799999997543 334456789999999853      4


Q ss_pred             CccceeeEEEeCCEEEEEEEcccCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccc
Q 026630          169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL  234 (235)
Q Consensus       169 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr  234 (235)
                      |+++++..|.-.+++|||+|-+.. +|.++|.. .....+....+..|+.|+..||..|-..||+|-
T Consensus       495 Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHa  560 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHA  560 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeec
Confidence            888999889889999999998855 89998853 334557888999999999999999999999995

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.96  E-value=3.5e-10  Score=88.79  Aligned_cols=112  Identities=24%  Similarity=0.279  Sum_probs=85.1

Q ss_pred             hccCCCCceeEEEEE-eCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QHMLVYV  188 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e  188 (235)
                      ..+|.|.= .|..+- .-.+++|++|.....  .....+...+|..++..++|+||++++.+++...      ..|+|||
T Consensus        23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e  101 (369)
T KOG0665|consen   23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME  101 (369)
T ss_pred             cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence            34666654 344442 225788998876433  3333456679999999999999999999997653      4689999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.. +|...+.-    .++=.....+..|+++|+.|||+.||+||+
T Consensus       102 ~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRd  143 (369)
T KOG0665|consen  102 LMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRD  143 (369)
T ss_pred             hhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecc
Confidence            9965 99988852    256667788999999999999999999995

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.82  E-value=1.4e-08  Score=86.04  Aligned_cols=114  Identities=19%  Similarity=0.187  Sum_probs=75.2

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhc----------------------------------------HHHHHH
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG----------------------------------------EKEFQT  157 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~  157 (235)
                      +.||.|++|+||+|.+.+|+.||||..+++-...                                        .-+|..
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            4699999999999999899999999986541110                                        012445


Q ss_pred             HHHHHccC----CCCCccceeeEEEe-CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHhcCCc
Q 026630          158 EVMLLGRL----HHRNLVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR-GLEYLHDGVS  231 (235)
Q Consensus       158 e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~-gl~yLH~~~i  231 (235)
                      |...+.++    .|.+-+.+...+++ ....+++|||+++++|.++..... ...+   ...++.+++. .+..+|..|+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~g~  278 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRDGF  278 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence            55544444    23333344444432 345689999999999988764321 1122   3456666665 4788999999


Q ss_pred             cccC
Q 026630          232 CHLF  235 (235)
Q Consensus       232 vHr~  235 (235)
                      +|++
T Consensus       279 ~H~D  282 (437)
T TIGR01982       279 FHAD  282 (437)
T ss_pred             eeCC
Confidence            9986

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.55  E-value=5.6e-07  Score=69.17  Aligned_cols=110  Identities=16%  Similarity=0.189  Sum_probs=83.5

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCCh-hcHHHHHHHHHHHccCCC--CCccceeeEEEeC---CEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSK-QGEKEFQTEVMLLGRLHH--RNLVNLVGYCAEK---GQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~~~  191 (235)
                      +.|+.|..+.+|+.+..+|..+++|....... .....+..|..++..+.+  .++++++......   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            45899999999999875668899998764422 134467899999988865  3456677666543   25689999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +.++.+.+..   ..++..+...++.+++..|.+||+..
T Consensus        84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~  119 (223)
T cd05154          84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVD  119 (223)
T ss_pred             CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            9888776521   34778888899999999999999865

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.55  E-value=6.1e-07  Score=65.95  Aligned_cols=117  Identities=17%  Similarity=0.110  Sum_probs=88.3

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecC--------ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATD--------SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .++.+|+-+.|+++.+ .|+..+||.-...        ..-..+....|++.+.++.--.|....-++.+.....++|||
T Consensus        13 ~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~   91 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF   91 (229)
T ss_pred             eeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence            5688999999999988 6888888865322        112234678899999888766777666677777778899999


Q ss_pred             ccC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSK-GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~-g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++ -++.+++...........-...++.+|-..+.-||..++||.+
T Consensus        92 ~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGD  138 (229)
T KOG3087|consen   92 IDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGD  138 (229)
T ss_pred             ccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeeccc
Confidence            976 4788888664433334444478999999999999999999975

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.55  E-value=1.4e-06  Score=65.72  Aligned_cols=111  Identities=21%  Similarity=0.193  Sum_probs=75.0

Q ss_pred             hccCCCCceeEEEEEeCC-------CCEEEEEEeecC-------------Ch---------hcHHHH----HHHHHHHcc
Q 026630          118 TLIGQGAFGPVYKAQMST-------GETVAVKVLATD-------------SK---------QGEKEF----QTEVMLLGR  164 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-------~~~vavK~~~~~-------------~~---------~~~~~~----~~e~~~l~~  164 (235)
                      ..||.|.-+.||.|...+       +..+|+|..+..             +.         .....+    .+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999996432       478999986431             00         001122    378888888


Q ss_pred             CCC--CCccceeeEEEeCCEEEEEEEcccCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCccccC
Q 026630          165 LHH--RNLVNLVGYCAEKGQHMLVYVFMSKGSLAS-HLYDENYGPLTWNLRVHIALDVARGLEYL-HDGVSCHLF  235 (235)
Q Consensus       165 l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~~~qi~~gl~yL-H~~~ivHr~  235 (235)
                      +..  -+++.+++.    ...+++|||+.+..+.. .+.+   ..++..+...+..+++.+|.+| |+.|+||++
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGD  150 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHAD  150 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            843  455566543    45679999997654432 2211   2344555667789999999999 899999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.51  E-value=3.3e-08  Score=86.68  Aligned_cols=116  Identities=22%  Similarity=0.236  Sum_probs=81.6

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEee----cC-Chh-cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLA----TD-SKQ-GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~----~~-~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...+|.|++|.++.... ........|..+    .. ... ....+..|+.+-..+.|||++..+..+.......-.|||
T Consensus       323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~  402 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY  402 (601)
T ss_pred             cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence            45789999997776642 222223333222    11 111 111255677777888999998877776655544455999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |++ ||..++.+.  ..++..++..+.+|++.|+.|+|++||.||+
T Consensus       403 ~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrd  445 (601)
T KOG0590|consen  403 CPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRD  445 (601)
T ss_pred             ccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceecc
Confidence            999 999998543  3588888999999999999999999999996

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.49  E-value=6e-07  Score=66.14  Aligned_cols=104  Identities=13%  Similarity=0.124  Sum_probs=72.7

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCcc-ceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV-NLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      +.++.|.++.||+.+. .+..+++|....... ....+..|...+..+.+.+++ +++...  ....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            4588999999999987 477899998754432 123457888888887555543 444433  33457999999998775


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc-----cccC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS-----CHLF  235 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i-----vHr~  235 (235)
                      ...       .   .......+++.+|+.||+.++     +|++
T Consensus        80 ~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD  113 (170)
T cd05151          80 TED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHND  113 (170)
T ss_pred             ccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCC
Confidence            420       1   113456789999999999985     9985

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.49  E-value=5.9e-08  Score=88.53  Aligned_cols=66  Identities=11%  Similarity=-0.036  Sum_probs=52.6

Q ss_pred             CCccceeeEE-------EeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          168 RNLVNLVGYC-------AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       168 ~niv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||.++++.+       ......+.++||+ .++|.++|... ...+++.++..++.||+.||+|||++||+||+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            5777777766       2224566778887 55999999543 35689999999999999999999999999996

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.38  E-value=1.8e-06  Score=74.65  Aligned_cols=111  Identities=15%  Similarity=0.059  Sum_probs=68.4

Q ss_pred             hccCCCCceeEEEEEeCC-CCEEEEEEeecCChh----------------------------------cH------HHHH
Q 026630          118 TLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQ----------------------------------GE------KEFQ  156 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~------~~~~  156 (235)
                      +.||.|++|+||++...+ |+.||||.++++-..                                  ..      -+|.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            579999999999998876 999999999754100                                  00      1234


Q ss_pred             HHHHHHccC----CCCCccceeeEEEe-CCEEEEEEEcccCCChhhhhhcCCCC----CCCHHHHHHHHHHHHHHHHHHh
Q 026630          157 TEVMLLGRL----HHRNLVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYG----PLTWNLRVHIALDVARGLEYLH  227 (235)
Q Consensus       157 ~e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~qi~~gl~yLH  227 (235)
                      +|...+.++    .+.+.+.+...+++ .....++|||++|+++.++-.-...+    .+.......++.|       +.
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if  277 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VF  277 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HH
Confidence            454444333    34455555555544 45668999999999997753111111    1222223333444       34


Q ss_pred             cCCccccC
Q 026630          228 DGVSCHLF  235 (235)
Q Consensus       228 ~~~ivHr~  235 (235)
                      ..|++|+|
T Consensus       278 ~~GffHaD  285 (537)
T PRK04750        278 RDGFFHAD  285 (537)
T ss_pred             hCCeeeCC
Confidence            69999986

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.30  E-value=5.5e-06  Score=61.09  Aligned_cols=107  Identities=21%  Similarity=0.231  Sum_probs=80.3

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecC---C-----hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATD---S-----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~---~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+++|+-+.++.+.+ -|.++++|.-.+.   .     .-......+|..++.++.--.|....-+..+.+...++|||+
T Consensus         3 ~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            578999999999977 5566777764322   1     112335678999998887767777666677777788999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++-.|.+++...         ...++..+-.-+.-||..||||.+
T Consensus        82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGD  117 (204)
T COG3642          82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGD  117 (204)
T ss_pred             CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCC
Confidence            999999898443         245667777778889999999975

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.29  E-value=1.1e-07  Score=85.92  Aligned_cols=119  Identities=19%  Similarity=0.234  Sum_probs=90.4

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC-hhcHHHHHHHHHH--HccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS-KQGEKEFQTEVML--LGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+.+.+.||.+.|=+|.++..++|. |+||.+-+.+ ......|.++++-  ...+++||.+.+.-+-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4456788999999999999886665 8899986553 3444455544433  4455899999887665556666788888


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+ +|.+-+.  .+.-+...+...++.|++.|+.-+|..||+|.+
T Consensus       103 vkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGD  145 (1431)
T KOG1240|consen  103 VKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGD  145 (1431)
T ss_pred             Hhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            866 8888883  334467778899999999999999999999985

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.17  E-value=1.7e-06  Score=70.57  Aligned_cols=66  Identities=17%  Similarity=0.160  Sum_probs=53.9

Q ss_pred             CCCCccceeeEEEeC---------------------------CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHH
Q 026630          166 HHRNLVNLVGYCAEK---------------------------GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD  218 (235)
Q Consensus       166 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~q  218 (235)
                      .|||||++.+.|.+.                           ..+|+||...+. +|++|+..+   ..+.....-+..|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~---~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR---HRSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC---CCchHHHHHHHHH
Confidence            699999998876432                           247889887766 999999553   3566777888999


Q ss_pred             HHHHHHHHhcCCccccC
Q 026630          219 VARGLEYLHDGVSCHLF  235 (235)
Q Consensus       219 i~~gl~yLH~~~ivHr~  235 (235)
                      +++|+.|||++||.||+
T Consensus       350 lLEav~hL~~hgvAhRD  366 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRD  366 (598)
T ss_pred             HHHHHHHHHHccchhhc
Confidence            99999999999999996

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.15  E-value=5.5e-05  Score=60.04  Aligned_cols=115  Identities=14%  Similarity=0.052  Sum_probs=76.7

Q ss_pred             cCCCCceeEEEEEeCCCCEEEEEEeecCChh-----------cHHHHHHHHHHHccCCCCCccce--eeEEEe-----CC
Q 026630          120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQ-----------GEKEFQTEVMLLGRLHHRNLVNL--VGYCAE-----KG  181 (235)
Q Consensus       120 lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~--~~~~~~-----~~  181 (235)
                      +-...-..|.+.++ +|+.+.||........           ....+.+|...+..+..-+|...  +++...     ..
T Consensus        30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~  108 (268)
T PRK15123         30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR  108 (268)
T ss_pred             EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence            33333344667766 6778999976432211           11136788888877754444444  445432     23


Q ss_pred             EEEEEEEcccCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..++|+|++++- +|.+++..-...+.+......++.+++..+.-||+.||+|++
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgD  163 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRD  163 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCC
Confidence            468999999875 788887432123455667788999999999999999999986

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.13  E-value=1e-05  Score=69.97  Aligned_cols=95  Identities=21%  Similarity=0.201  Sum_probs=72.9

Q ss_pred             eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHH
Q 026630          133 MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR  212 (235)
Q Consensus       133 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  212 (235)
                      ..++.+|.|...............+.+..++.++||||++++......+..|+|+|-+.  .|..++..     +.....
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v  106 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEV  106 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHH
Confidence            34677888888765544333445677788999999999999999999999999999873  56666632     334555


Q ss_pred             HHHHHHHHHHHHHHh-cCCcccc
Q 026630          213 VHIALDVARGLEYLH-DGVSCHL  234 (235)
Q Consensus       213 ~~~~~qi~~gl~yLH-~~~ivHr  234 (235)
                      ..-+.||++||.||| +.+++|.
T Consensus       107 ~~Gl~qIl~AL~FL~~d~~lvHg  129 (690)
T KOG1243|consen  107 CLGLFQILAALSFLNDDCNLVHG  129 (690)
T ss_pred             HHHHHHHHHHHHHHhccCCeeec
Confidence            667889999999997 7789995

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.11  E-value=6.4e-06  Score=69.86  Aligned_cols=69  Identities=26%  Similarity=0.485  Sum_probs=61.8

Q ss_pred             HccCCCCCccceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       162 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      |+.+.|.|+.+++|.+.+++..++|.+||..|+|.+.+.. ....+++.-...+.++|+.||+|||+--|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i   69 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPI   69 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcc
Confidence            3567899999999999999999999999999999999965 34568999999999999999999998766

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.01  E-value=1.1e-06  Score=75.20  Aligned_cols=115  Identities=23%  Similarity=0.258  Sum_probs=89.0

Q ss_pred             ccCCCCceeEEEEE----eCCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEEccc
Q 026630          119 LIGQGAFGPVYKAQ----MSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       119 ~lg~G~~g~v~~~~----~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .+|+|+||.|++..    .+.+..++.|.+.+..  .........|..++...+ ||.++++.-.+..+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            37899999998763    2345567777775431  111114455666777775 9999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|..-+.  ....++......+...++.+++++|+.+++||+
T Consensus        81 gg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd  122 (612)
T KOG0603|consen   81 GGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLGIAYRD  122 (612)
T ss_pred             cchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhc
Confidence            999988773  335577888888899999999999999999985

>PRK09902 hypothetical protein; Provisional

Probab=97.92  E-value=0.00028  Score=53.68  Aligned_cols=115  Identities=18%  Similarity=0.137  Sum_probs=80.5

Q ss_pred             cCCCCceeEEEEEeCCCCEEEEEEeecC-----C-hhcHHHHHHHHHHHccCCCCC--ccceeeEEEe----CCEEEEEE
Q 026630          120 IGQGAFGPVYKAQMSTGETVAVKVLATD-----S-KQGEKEFQTEVMLLGRLHHRN--LVNLVGYCAE----KGQHMLVY  187 (235)
Q Consensus       120 lg~G~~g~v~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~----~~~~~lv~  187 (235)
                      -+.|+-+.|++-.+ +|..+-+|.....     . +.-...|.+|...+..+..-+  ++........    .-.-+||+
T Consensus        26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            46688888998877 4557888876421     1 334568999999988885433  4444422111    12357899


Q ss_pred             Eccc-CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMS-KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~-~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |-++ ..||.+++.+....+.+......+..+++..++-||+.|+.|++
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgd  153 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGC  153 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            9665 36888888554334567777889999999999999999999985

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.87  E-value=9.6e-05  Score=62.63  Aligned_cols=107  Identities=18%  Similarity=0.155  Sum_probs=75.3

Q ss_pred             eEEEEE-eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEEEEcccC-CChhhhhh
Q 026630          127 PVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVYVFMSK-GSLASHLY  200 (235)
Q Consensus       127 ~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-g~L~~~l~  200 (235)
                      +.|++. ..+|..+++|++..+..........-++.++++.|+|+|.+..++..    +..+++|++|.|+ ++|.++-.
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F  370 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYF  370 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHc
Confidence            456663 33678889998844332222222344567889999999999998863    3467899999985 67766543


Q ss_pred             cC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccc
Q 026630          201 DE-------------NYGPLTWNLRVHIALDVARGLEYLHDGVSCH  233 (235)
Q Consensus       201 ~~-------------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivH  233 (235)
                      ..             .....++...+.++.|+..||.++|+.|+.-
T Consensus       371 ~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAc  416 (655)
T KOG3741|consen  371 ANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLAC  416 (655)
T ss_pred             cCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            21             1123566788999999999999999999753

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.57  E-value=0.00072  Score=53.11  Aligned_cols=124  Identities=19%  Similarity=0.113  Sum_probs=82.7

Q ss_pred             CCccCHHHHHHHH--hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC----------------------hhcHHHHH
Q 026630          101 IPEYSYKDLQKAT--CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS----------------------KQGEKEFQ  156 (235)
Q Consensus       101 ~~~~~~~~l~~~~--~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~  156 (235)
                      ...+.+..+....  ..+++.||-|.-+.||.|....|.++++|.=+...                      .-......
T Consensus        78 yD~LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~  157 (304)
T COG0478          78 YDALALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAE  157 (304)
T ss_pred             hhHHHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHH
Confidence            3444455554443  23568899999999999998889999999643210                      00123456


Q ss_pred             HHHHHHccCCCC--CccceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccc
Q 026630          157 TEVMLLGRLHHR--NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL  234 (235)
Q Consensus       157 ~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr  234 (235)
                      +|.++|.++...  .+++.+++    +...++|||+++-.|...-       ++....-.++..|++-+.-+-..|+||.
T Consensus       158 rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHG  226 (304)
T COG0478         158 REFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHG  226 (304)
T ss_pred             HHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCcccc
Confidence            888899988544  67776655    6678999999886664322       2333444555666666666668999997


Q ss_pred             C
Q 026630          235 F  235 (235)
Q Consensus       235 ~  235 (235)
                      +
T Consensus       227 D  227 (304)
T COG0478         227 D  227 (304)
T ss_pred             C
Confidence            5

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.55  E-value=4.8e-05  Score=60.88  Aligned_cols=73  Identities=29%  Similarity=0.342  Sum_probs=57.0

Q ss_pred             HccCCCCCccceeeEEEeC-----CEEEEEEEcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--cc
Q 026630          162 LGRLHHRNLVNLVGYCAEK-----GQHMLVYVFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGV--SC  232 (235)
Q Consensus       162 l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~--iv  232 (235)
                      +-.+.|.||++++.++.+.     ....++.||+.-|++.++|++-  +...+....-.+++.||..||.|||+..  |+
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            4445799999999887543     3578899999999999999752  2334556667889999999999999876  66


Q ss_pred             cc
Q 026630          233 HL  234 (235)
Q Consensus       233 Hr  234 (235)
                      |.
T Consensus       201 hg  202 (458)
T KOG1266|consen  201 HG  202 (458)
T ss_pred             cC
Confidence            53

>PLN02876 acyl-CoA dehydrogenase

Probab=97.54  E-value=0.00098  Score=61.40  Aligned_cols=109  Identities=16%  Similarity=0.273  Sum_probs=76.9

Q ss_pred             hccCCCCceeEEEEEeCCC---CEEEEEEeecCC-hhcHHHHHHHHHHHccCC-CCCc--cceeeEEEeC---CEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMSTG---ETVAVKVLATDS-KQGEKEFQTEVMLLGRLH-HRNL--VNLVGYCAEK---GQHMLVY  187 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~lv~  187 (235)
                      +.++.|.+..+|+.+...+   ..+++|..+... ......+.+|..+++.+. |+++  +++++.|.+.   +..++||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            5688899999998876443   356777655432 123346789999999884 6665  6777777654   4678999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      ||+++..+.+    .....++..+...++.++++.|+.||+..
T Consensus       124 E~v~G~~~~~----~~~~~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        124 EYLEGRIFVD----PKLPGVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             EecCCcccCC----ccCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            9998754432    11123567777889999999999999854

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=97.53  E-value=9e-05  Score=50.89  Aligned_cols=36  Identities=28%  Similarity=0.281  Sum_probs=23.6

Q ss_pred             CCCccceeehhHHHHHHHHHHHHHHHHhhhhhcccC
Q 026630            3 GESSGLIIGISIGVVIGVLLAISALFCFRYHRKRSQ   38 (235)
Q Consensus         3 ~~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~~   38 (235)
                      +-+.+.|++|++|++++++..+++++++.+|++||.
T Consensus        60 ~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~   95 (122)
T PF01102_consen   60 RFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKS   95 (122)
T ss_dssp             SSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred             CccccceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            345688999999999999777766555555554443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.53  E-value=0.00032  Score=55.96  Aligned_cols=119  Identities=20%  Similarity=0.290  Sum_probs=71.8

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCC----------CCCccceeeEEE---
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLH----------HRNLVNLVGYCA---  178 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~----------h~niv~~~~~~~---  178 (235)
                      ..+.||.|.++.||.++. .+++.+++|......   ....+.+.+|......+.          |-.++-.++...   
T Consensus        16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~   95 (288)
T PF14531_consen   16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG   95 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred             EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence            356799999999999976 457899999885432   223456666665444432          222332222221   


Q ss_pred             ------eC---C-----EEEEEEEcccCCChhhhhh---cCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 ------EK---G-----QHMLVYVFMSKGSLASHLY---DENY--GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ------~~---~-----~~~lv~e~~~~g~L~~~l~---~~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                            ..   .     +.+++|+-+ .+||.+++.   ....  ..+....++.+..|+++.+++||+.|+||.+
T Consensus        96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgd  170 (288)
T PF14531_consen   96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGD  170 (288)
T ss_dssp             S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred             CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecc
Confidence                  11   1     235677766 458877753   1111  1223344577789999999999999999975

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.50  E-value=1.9e-05  Score=69.59  Aligned_cols=120  Identities=21%  Similarity=0.279  Sum_probs=87.9

Q ss_pred             hhhccCCCCceeEEEEEeC--CCCEEEEEEeecCC--hhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEEcc
Q 026630          116 FTTLIGQGAFGPVYKAQMS--TGETVAVKVLATDS--KQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +...||+|+|+.+......  ....+++|.+....  .........|...-+.+. |+|++.+++.....+..++.++|.
T Consensus        24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s  103 (601)
T KOG0590|consen   24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS  103 (601)
T ss_pred             ccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence            3455899999998887542  33455555554332  222223344666666665 999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-DGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH-~~~ivHr~  235 (235)
                      .++++...+........+......+..|+..++.|+| ..++.||.
T Consensus       104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~  149 (601)
T KOG0590|consen  104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRD  149 (601)
T ss_pred             cccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCC
Confidence            9999998883222224566677889999999999999 99999985

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.21  E-value=0.0016  Score=55.93  Aligned_cols=128  Identities=20%  Similarity=0.144  Sum_probs=93.7

Q ss_pred             CHHHHHHHHhhhhhccCC--CCceeEEEEEe---CCCCEEEEEEee--cCChhcHHHHHHHHHHHccC-CCCCccceeeE
Q 026630          105 SYKDLQKATCNFTTLIGQ--GAFGPVYKAQM---STGETVAVKVLA--TDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY  176 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~--G~~g~v~~~~~---~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~  176 (235)
                      ...+...........+|.  |.+|.+|.+..   ..+..+++|.-.  .........=.+|+....++ .|+|.++....
T Consensus       107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA  186 (524)
T ss_pred             CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc
Confidence            344566666677788999  99999999854   356678887732  22222222335666666666 69999998888


Q ss_pred             EEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCcccc
Q 026630          177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR----GLEYLHDGVSCHL  234 (235)
Q Consensus       177 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~----gl~yLH~~~ivHr  234 (235)
                      +...+..++-+|++. .+|.++.+... ..++.........+...    |+.++|+.+++|-
T Consensus       187 ~e~~~~lfiqtE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~  246 (524)
T KOG0601|consen  187 WEGSGILFIQTELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHD  246 (524)
T ss_pred             cccCCcceeeecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCccccc
Confidence            888889999999996 58888875432 33666777788888888    9999999999985

>PRK10593 hypothetical protein; Provisional

Probab=97.20  E-value=0.006  Score=49.36  Aligned_cols=102  Identities=15%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC---CCccceeeEEEe---CCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH---RNLVNLVGYCAE---KGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~lv~e~~~  191 (235)
                      +.|+.|..+.||.-...++ .+.+|..+..  .....+..|...++.+..   ..++++++.+.+   .+..++|||+++
T Consensus        20 ~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         20 ECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             eecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            5699999999999876445 4566764321  122467889988887742   467788887754   356899999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG  229 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  229 (235)
                      ++++.+.       ..+......++.+++++|+-||+.
T Consensus        97 G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         97 GVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             CEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9887651       123344566778889999999985

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.19  E-value=0.004  Score=46.75  Aligned_cols=101  Identities=22%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             eEEEEEeCCCCEEEEEEeecC-------------Chh-------------cHHHHHHHHHHHccCCCC--CccceeeEEE
Q 026630          127 PVYKAQMSTGETVAVKVLATD-------------SKQ-------------GEKEFQTEVMLLGRLHHR--NLVNLVGYCA  178 (235)
Q Consensus       127 ~v~~~~~~~~~~vavK~~~~~-------------~~~-------------~~~~~~~e~~~l~~l~h~--niv~~~~~~~  178 (235)
                      .||.|...++..+|+|..+..             ...             ......+|.+.|.++..-  ++++++++  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            488898778889999986431             000             122456899999998665  45555543  


Q ss_pred             eCCEEEEEEEccc--CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCccccC
Q 026630          179 EKGQHMLVYVFMS--KGSLASHLYDENYGPLTWNLRVHIALDVARGLEY-LHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~y-LH~~~ivHr~  235 (235)
                      .  ...+||||++  +..+..+. ...   ++......++.+++..+.. +|+.|+||.+
T Consensus        79 ~--~~~ivME~I~~~G~~~~~l~-~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGD  132 (188)
T PF01163_consen   79 N--RNVIVMEYIGEDGVPLPRLK-DVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGD  132 (188)
T ss_dssp             E--TTEEEEE--EETTEEGGCHH-HCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred             e--CCEEEEEecCCCccchhhHH-hcc---ccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence            2  3469999998  54454433 221   1233456677788886666 5899999975

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.99  E-value=0.013  Score=45.42  Aligned_cols=102  Identities=15%  Similarity=0.125  Sum_probs=70.9

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC--ccceeeEEEeCCEEEEEEEcccCCC-
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN--LVNLVGYCAEKGQHMLVYVFMSKGS-  194 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~-  194 (235)
                      .+|++|..+.||+.   .+..+++|..+...  ......+|.+++..+..-+  +++.++...+.+...++||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            46899999999984   24456788876432  2235678888888875433  4666777777777889999998863 


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +...+      ..+......++.++++.+.-||+..
T Consensus        82 ~~~~~------~~~~~~~~~l~~~la~~l~~lH~~~  111 (226)
T TIGR02172        82 FSRII------SDNPSRLEEIAKIFAEMAKKLHSTK  111 (226)
T ss_pred             hhhhh------cCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            33222      1234455678888999999999754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.97  E-value=0.0042  Score=47.44  Aligned_cols=81  Identities=21%  Similarity=0.127  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHccCCCCC--ccceeeEEEeC----CEEEEEEEcccC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 026630          153 KEFQTEVMLLGRLHHRN--LVNLVGYCAEK----GQHMLVYVFMSK-GSLASHLYDENYGPLTWNLRVHIALDVARGLEY  225 (235)
Q Consensus       153 ~~~~~e~~~l~~l~h~n--iv~~~~~~~~~----~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~y  225 (235)
                      ....+|...+..+..-+  .+..+++....    ...++|+|++++ .+|.+++....  ..+......++.+++..++-
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHH
Confidence            35677887777664333  44555555442    244799999987 47999885422  25666778899999999999


Q ss_pred             HhcCCccccC
Q 026630          226 LHDGVSCHLF  235 (235)
Q Consensus       226 LH~~~ivHr~  235 (235)
                      ||+.||+|++
T Consensus       134 lH~~gi~H~D  143 (206)
T PF06293_consen  134 LHDAGIYHGD  143 (206)
T ss_pred             HHHCcCCCCC
Confidence            9999999986

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=96.96  E-value=0.00039  Score=45.97  Aligned_cols=33  Identities=36%  Similarity=0.341  Sum_probs=22.8

Q ss_pred             CCCccceeehhHHHHHHHHHHHHHHHHhhhhhc
Q 026630            3 GESSGLIIGISIGVVIGVLLAISALFCFRYHRK   35 (235)
Q Consensus         3 ~~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~   35 (235)
                      +.+.+.|++|++|+++++..++.+++||+.+|+
T Consensus        62 ~ls~gaiagi~vg~~~~v~~lv~~l~w~f~~r~   94 (96)
T PTZ00382         62 GLSTGAIAGISVAVVAVVGGLVGFLCWWFVCRG   94 (96)
T ss_pred             CcccccEEEEEeehhhHHHHHHHHHhheeEEee
Confidence            456789999999988777666555555554443

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.96  E-value=0.0003  Score=60.16  Aligned_cols=118  Identities=20%  Similarity=0.183  Sum_probs=84.0

Q ss_pred             hhhccCCCCceeEEEEEe--CCCCEEEEEEeecCChhcHHH--HHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcc
Q 026630          116 FTTLIGQGAFGPVYKAQM--STGETVAVKVLATDSKQGEKE--FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ....||.|.|+.++....  .++..+++|.+.........+  -+.|+.+...+ .|.+++.....+......++=.|||
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~  348 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFC  348 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhh
Confidence            346799999999998753  356788888875442211111  24555555555 5888888766665556667888999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++...+  ....-++....+.+..|++.++.++|++.++|++
T Consensus       349 ~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d  391 (524)
T KOG0601|consen  349 EGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLD  391 (524)
T ss_pred             cCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchhhhccc
Confidence            998887655  2223466777889999999999999999999984

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.94  E-value=0.01  Score=45.59  Aligned_cols=101  Identities=16%  Similarity=0.267  Sum_probs=73.5

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCC--CccceeeEEEe---CCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR--NLVNLVGYCAE---KGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~---~~~~~lv~e~~~~  192 (235)
                      +.++.|..+.+|+....+ ..+++|.....  .....+..|..++..+...  .+++++.....   ....+++|+++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            457889999999998855 68999987544  3445667888877777432  35666664432   3457899999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG  229 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  229 (235)
                      ..+..        ..+......++.++++.++-||+.
T Consensus        80 ~~~~~--------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   80 RPLDD--------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             EEHHH--------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccc--------cccccccccccccchhhhhhcccc
Confidence            77766        256777888999999999999976

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=96.93  E-value=0.00032  Score=37.73  Aligned_cols=27  Identities=26%  Similarity=0.544  Sum_probs=11.7

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHh
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCF   30 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~   30 (235)
                      ++++.-+++++++-+++++++++++++
T Consensus         7 ~~~~vaIa~~VvVPV~vI~~vl~~~l~   33 (40)
T PF08693_consen    7 NSNTVAIAVGVVVPVGVIIIVLGAFLF   33 (40)
T ss_pred             CCceEEEEEEEEechHHHHHHHHHHhh
Confidence            344444444444444444444433333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=96.85  E-value=0.0005  Score=48.64  Aligned_cols=33  Identities=33%  Similarity=0.535  Sum_probs=21.3

Q ss_pred             ccceeehhHHHHHHHHHHHHHHHHhhh-hhcccC
Q 026630            6 SGLIIGISIGVVIGVLLAISALFCFRY-HRKRSQ   38 (235)
Q Consensus         6 ~~~i~~i~~g~~~~~~~~~~~~~~~~~-~r~r~~   38 (235)
                      ..+|+++++|+..++++++++++++++ |++|..
T Consensus        48 knIVIGvVVGVGg~ill~il~lvf~~c~r~kktd   81 (154)
T PF04478_consen   48 KNIVIGVVVGVGGPILLGILALVFIFCIRRKKTD   81 (154)
T ss_pred             ccEEEEEEecccHHHHHHHHHhheeEEEecccCc
Confidence            468899999987777666555555444 444433

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.54  E-value=0.022  Score=43.14  Aligned_cols=108  Identities=24%  Similarity=0.345  Sum_probs=71.5

Q ss_pred             HHhhhhhccCCCCc-eeEEEEEeCCCCEEEEEEeecC------------C--h-------hcHHHHHHHHHHHccC---C
Q 026630          112 ATCNFTTLIGQGAF-GPVYKAQMSTGETVAVKVLATD------------S--K-------QGEKEFQTEVMLLGRL---H  166 (235)
Q Consensus       112 ~~~~~~~~lg~G~~-g~v~~~~~~~~~~vavK~~~~~------------~--~-------~~~~~~~~e~~~l~~l---~  166 (235)
                      ..+++.+.||.|.- |.||+.+. +|..+|+|.....            .  .       .....|..|.++..++   .
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            45567788999999 99999998 7889999994210            0  0       1234688898887666   4


Q ss_pred             CCCc--cceeeEEEeC------------------CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 026630          167 HRNL--VNLVGYCAEK------------------GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL  226 (235)
Q Consensus       167 h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yL  226 (235)
                      +.++  ++.+|+..-.                  ....+|.||++...           .++    ..-+.+|.+-|..+
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~  180 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKIL  180 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHH
Confidence            5566  7888876221                  12345666654422           122    33456777778889


Q ss_pred             hcCCccccC
Q 026630          227 HDGVSCHLF  235 (235)
Q Consensus       227 H~~~ivHr~  235 (235)
                      |..||+=|+
T Consensus       181 ~k~gI~~~D  189 (207)
T PF13095_consen  181 HKLGIVPRD  189 (207)
T ss_pred             HHCCeeecc
Confidence            999988654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.46  E-value=0.012  Score=43.53  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=55.4

Q ss_pred             hhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      +..+.|++|.+|.||++.+ .+..+++|.-+.+++  ...+..|.+++..+.-.++..=+-.+   +..++.|||+.|-.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcc
Confidence            3456799999999999999 667899998765533  35788899988887665554322222   22245599998877


Q ss_pred             hhhhh
Q 026630          195 LASHL  199 (235)
Q Consensus       195 L~~~l  199 (235)
                      |.+.-
T Consensus        99 L~~~~  103 (201)
T COG2112          99 LGKLE  103 (201)
T ss_pred             hhhhh
Confidence            76554

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.45  E-value=0.027  Score=43.98  Aligned_cols=99  Identities=16%  Similarity=0.160  Sum_probs=66.3

Q ss_pred             cCCCCc-eeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCChhh
Q 026630          120 IGQGAF-GPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS  197 (235)
Q Consensus       120 lg~G~~-g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~  197 (235)
                      |..|.. ..||+.... +..+.+|......   .....+|+.+++.+ .+--++++++.....+..+++||+++|.++..
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            445555 678988763 4678888875433   23456788887777 34456667776666566789999999977754


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          198 HLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       198 ~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      ...        ..+...++.++++.++-||+..
T Consensus        82 ~~~--------~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          82 LWE--------ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             hhc--------ccCHHHHHHHHHHHHHHHhcCC
Confidence            321        1123457888889999999754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.42  E-value=0.055  Score=41.60  Aligned_cols=117  Identities=9%  Similarity=0.093  Sum_probs=66.6

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHH---------HHHHHHHccCCC---CCccceee
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEF---------QTEVMLLGRLHH---RNLVNLVG  175 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~e~~~l~~l~h---~niv~~~~  175 (235)
                      ++....+...+++.......|.+-+. ++...++|..+......++.|         .+.+..+..+..   .....++.
T Consensus        27 ~i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   27 KILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            33333444445555555566666666 677888998875533322222         233333333322   22222222


Q ss_pred             EEEe-----CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          176 YCAE-----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       176 ~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +...     ....+++|||++|..|.++..      ++.    .++..+.+.+.-||+.|+.|.+
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD  160 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGD  160 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCC
Confidence            2221     234568999999988876541      222    2456677889999999999975

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF15102 TMEM154: TMEM154 protein family

Probab=96.41  E-value=0.0053  Score=43.27  Aligned_cols=33  Identities=30%  Similarity=0.406  Sum_probs=17.2

Q ss_pred             cceeehhHHHHHH-HHHHHHHHHHhhhhhcccCC
Q 026630            7 GLIIGISIGVVIG-VLLAISALFCFRYHRKRSQI   39 (235)
Q Consensus         7 ~~i~~i~~g~~~~-~~~~~~~~~~~~~~r~r~~~   39 (235)
                      ..|+.|+++++++ +++++++++++++||||.|.
T Consensus        56 efiLmIlIP~VLLvlLLl~vV~lv~~~kRkr~K~   89 (146)
T PF15102_consen   56 EFILMILIPLVLLVLLLLSVVCLVIYYKRKRTKQ   89 (146)
T ss_pred             ceEEEEeHHHHHHHHHHHHHHHheeEEeecccCC
Confidence            3356666664444 44444455555555555543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.37  E-value=0.021  Score=49.66  Aligned_cols=82  Identities=20%  Similarity=0.234  Sum_probs=55.2

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChh----------------------------------------cHHHHHH
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ----------------------------------------GEKEFQT  157 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~~~~  157 (235)
                      +.|+.++.|+||+|++.+|+.||||+.+++-..                                        ..-+|.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            568999999999999989999999998654110                                        0012334


Q ss_pred             HHHHHccC----CCCCccceeeEEEe-CCEEEEEEEcccCCChhhhh
Q 026630          158 EVMLLGRL----HHRNLVNLVGYCAE-KGQHMLVYVFMSKGSLASHL  199 (235)
Q Consensus       158 e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l  199 (235)
                      |...+.++    ....-+.+...+++ .....++|||++|..+.+..
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH
Confidence            44444333    33333455556654 45668999999998888774

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=96.21  E-value=0.01  Score=31.41  Aligned_cols=21  Identities=33%  Similarity=0.735  Sum_probs=11.6

Q ss_pred             eehhHHHHHHHHHHHHHHHHh
Q 026630           10 IGISIGVVIGVLLAISALFCF   30 (235)
Q Consensus        10 ~~i~~g~~~~~~~~~~~~~~~   30 (235)
                      ++|++|+++++.++++.++++
T Consensus         6 IaIIv~V~vg~~iiii~~~~Y   26 (38)
T PF02439_consen    6 IAIIVAVVVGMAIIIICMFYY   26 (38)
T ss_pred             hhHHHHHHHHHHHHHHHHHHH
Confidence            456666666655555444443

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=96.15  E-value=0.0014  Score=39.12  Aligned_cols=32  Identities=25%  Similarity=0.514  Sum_probs=0.4

Q ss_pred             ccceeehhHHHHHHHHHHHHHHHHhhhhhccc
Q 026630            6 SGLIIGISIGVVIGVLLAISALFCFRYHRKRS   37 (235)
Q Consensus         6 ~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~   37 (235)
                      +.++++++.|+++++++++++++++.+|.+++
T Consensus         8 ~~vlaavIaG~Vvgll~ailLIlf~iyR~rkk   39 (64)
T PF01034_consen    8 SEVLAAVIAGGVVGLLFAILLILFLIYRMRKK   39 (64)
T ss_dssp             -----------------------------S--
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            35556777777777666666555554444443

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=96.01  E-value=0.0073  Score=31.95  Aligned_cols=33  Identities=18%  Similarity=0.507  Sum_probs=20.6

Q ss_pred             CCCCccceeehhHHHHHHHHHHHHHHHHhhhhh
Q 026630            2 KGESSGLIIGISIGVVIGVLLAISALFCFRYHR   34 (235)
Q Consensus         2 ~~~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r   34 (235)
                      +++.-++|+++++|.++++++.+.-.+|+++.+
T Consensus         2 p~s~IaIIv~V~vg~~iiii~~~~YaCcykk~~   34 (38)
T PF02439_consen    2 PSSTIAIIVAVVVGMAIIIICMFYYACCYKKHR   34 (38)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            345567788887777766666655555554443

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.70  E-value=0.063  Score=46.75  Aligned_cols=115  Identities=15%  Similarity=0.106  Sum_probs=66.9

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChh-------------------------------------cHHHHHHHHH
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ-------------------------------------GEKEFQTEVM  160 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~-------------------------------------~~~~~~~e~~  160 (235)
                      +.|+.-+.|+|+++++.+|..||||..+++-..                                     ..-+|..|.+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            469999999999999989999999997654110                                     0113444543


Q ss_pred             HH----ccCCCCCc---cceeeEEEe-CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcc
Q 026630          161 LL----GRLHHRNL---VNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC  232 (235)
Q Consensus       161 ~l----~~l~h~ni---v~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~iv  232 (235)
                      -.    ..+.|-+.   |.+..++++ .....|+||||+|..+.+...-.. ..++......-+.++..-|-+  ..|++
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~~~qIf--~~Gff  323 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAYLEQIF--KTGFF  323 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHHHHHHH--hcCCc
Confidence            32    23345552   224444444 345679999999977765532111 235655544444443333333  34577


Q ss_pred             ccC
Q 026630          233 HLF  235 (235)
Q Consensus       233 Hr~  235 (235)
                      |-|
T Consensus       324 HaD  326 (538)
T KOG1235|consen  324 HAD  326 (538)
T ss_pred             cCC
Confidence            743

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.58  E-value=0.26  Score=38.65  Aligned_cols=110  Identities=24%  Similarity=0.212  Sum_probs=68.0

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecCCh--h-----------------cH-----HHHHHHHHHHccCC--CCCccc
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSK--Q-----------------GE-----KEFQTEVMLLGRLH--HRNLVN  172 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~-----------------~~-----~~~~~e~~~l~~l~--h~niv~  172 (235)
                      .|++|.-+.||+|...++..+|+|..+....  .                 ..     ....+|..-|.++.  +-.+++
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            5788999999999876789999999864310  0                 00     11235666666663  334444


Q ss_pred             eeeEEEeCCEEEEEEEcccCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          173 LVGYCAEKGQHMLVYVFMSKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       173 ~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      .+++.    ...|+|||+... .-.-.|.+   .++...+...+..++++.|.-|-. .++||.+
T Consensus       135 Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgD  192 (268)
T COG1718         135 PIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGD  192 (268)
T ss_pred             ceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCccccc
Confidence            44442    336999999653 11122211   122333567778888888888865 9999964

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=95.38  E-value=0.055  Score=40.34  Aligned_cols=10  Identities=50%  Similarity=0.909  Sum_probs=4.1

Q ss_pred             eeehhHHHHH
Q 026630            9 IIGISIGVVI   18 (235)
Q Consensus         9 i~~i~~g~~~   18 (235)
                      +++|++|+++
T Consensus        77 ~~~iivgvi~   86 (179)
T PF13908_consen   77 ITGIIVGVIC   86 (179)
T ss_pred             eeeeeeehhh
Confidence            3444444433

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.76  E-value=0.56  Score=35.59  Aligned_cols=108  Identities=20%  Similarity=0.222  Sum_probs=68.2

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCC----------------hhcHHHHHHHHHHHccC------CCCCccceee
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDS----------------KQGEKEFQTEVMLLGRL------HHRNLVNLVG  175 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l------~h~niv~~~~  175 (235)
                      ..||+|+.-.+|.--  .+....||......                ....++..+|+.-...+      .+.+|.+++|
T Consensus         7 ~~i~~G~~R~cy~HP--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             cccccCCCceEEECC--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            568999988888653  34456778776544                11234556666544333      4889999999


Q ss_pred             EEEeCCEEEEEEEcccC------CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccc
Q 026630          176 YCAEKGQHMLVYVFMSK------GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL  234 (235)
Q Consensus       176 ~~~~~~~~~lv~e~~~~------g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr  234 (235)
                      ...++....+|+|.+.+      -+|.+++..   ..++. .....   +-+=.+||-+++|+.+
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~---L~~f~~~l~~~~Iv~~  142 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQA---LDEFKRYLLDHHIVIR  142 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHH---HHHHHHHHHHcCCeec
Confidence            99999888999997643      346777733   23554 32333   3334556667776654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.54  E-value=0.43  Score=40.31  Aligned_cols=82  Identities=20%  Similarity=0.178  Sum_probs=54.3

Q ss_pred             hccCCCCceeEEEEEeCCC-CEEEEEEeecC-----C--hhcHHHHHHHHHHHccC---CCCCccceeeEEEeCCEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMSTG-ETVAVKVLATD-----S--KQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~-~~vavK~~~~~-----~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +.||.|.+..||+....+| +.++||.-.+.     .  +.....+..|.+.|..+   ....+++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            4589999999999987666 48999985421     1  12344566777777765   22455666555  44556899


Q ss_pred             EEcccCCC-hhhhhhc
Q 026630          187 YVFMSKGS-LASHLYD  201 (235)
Q Consensus       187 ~e~~~~g~-L~~~l~~  201 (235)
                      |||+++.. +++.|..
T Consensus       110 ME~L~~~~~lr~~Ll~  125 (401)
T PRK09550        110 MEDLSDHKILRKGLID  125 (401)
T ss_pred             EecCCCccHHHHHHhc
Confidence            99998643 5566533

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.41  E-value=0.49  Score=39.53  Aligned_cols=112  Identities=21%  Similarity=0.224  Sum_probs=71.4

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecC-------C------------------hhcHH-HHHHHHHHHccCCCCCcc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATD-------S------------------KQGEK-EFQTEVMLLGRLHHRNLV  171 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~-------~------------------~~~~~-~~~~e~~~l~~l~h~niv  171 (235)
                      .+|..|.-+.||.+.-.+|..+|||+.+..       +                  ....+ ....|++-|++++...|+
T Consensus       150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP  229 (520)
T KOG2270|consen  150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP  229 (520)
T ss_pred             cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            358888889999998878999999986421       0                  00111 234678888888877766


Q ss_pred             ceeeEEEeCCEEEEEEEcccCCCh-hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCcccc
Q 026630          172 NLVGYCAEKGQHMLVYVFMSKGSL-ASHLYDENYGPLTWNLRVHIALDVARGLEYL-HDGVSCHL  234 (235)
Q Consensus       172 ~~~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yL-H~~~ivHr  234 (235)
                      ..--....  ...|||+|+..-.. ...|.   ...++...+..+-.|++.-|.-| |..++||-
T Consensus       230 ~PePIlLk--~hVLVM~FlGrdgw~aPkLK---d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHA  289 (520)
T KOG2270|consen  230 CPEPILLK--NHVLVMEFLGRDGWAAPKLK---DASLSTSKARELYQQCVRIMRRLYQKCRLVHA  289 (520)
T ss_pred             CCCceeee--cceEeeeeccCCCCcCcccc---cccCChHHHHHHHHHHHHHHHHHHHHhceecc
Confidence            54433333  24689999963221 22221   23355556666767777777777 67788884

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=94.06  E-value=0.021  Score=35.88  Aligned_cols=18  Identities=28%  Similarity=0.455  Sum_probs=10.8

Q ss_pred             CCccCHHHHHHHHhhhhh
Q 026630          101 IPEYSYKDLQKATCNFTT  118 (235)
Q Consensus       101 ~~~~~~~~l~~~~~~~~~  118 (235)
                      ..+.+|+|...+-.+|.+
T Consensus        54 IDP~TYEDP~qAV~eFAk   71 (75)
T PF14575_consen   54 IDPHTYEDPNQAVREFAK   71 (75)
T ss_dssp             --GGGSSSHHHHHHHCSS
T ss_pred             cCcccccCHHHHHHHHHh
Confidence            345667777777666654

...

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=93.94  E-value=0.025  Score=39.10  Aligned_cols=30  Identities=30%  Similarity=0.430  Sum_probs=27.4

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecC
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATD  147 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~  147 (235)
                      +.|+.|+.|+||+|.+.+|+.||||..+++
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchH
Confidence            569999999999999988999999998765

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=93.83  E-value=0.053  Score=50.28  Aligned_cols=28  Identities=39%  Similarity=0.608  Sum_probs=20.2

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVK  142 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK  142 (235)
                      +-.+++..|+||.||....+ ..+++|.|
T Consensus        86 ~~IklisngAygavylvrh~~trqrfa~k  114 (1205)
T KOG0606|consen   86 NTIKLISNGAYGAVYLVRHKETRQRFAMK  114 (1205)
T ss_pred             ceeEeeccCCCCceeeeeccccccchhhc
Confidence            34578999999999999653 34556663

>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix

Probab=93.42  E-value=0.19  Score=29.87  Aligned_cols=33  Identities=21%  Similarity=0.314  Sum_probs=24.7

Q ss_pred             CCCCccceeehhHHHHHHHHHHHHHHHHhhhhh
Q 026630            2 KGESSGLIIGISIGVVIGVLLAISALFCFRYHR   34 (235)
Q Consensus         2 ~~~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r   34 (235)
                      +|-+.|.|+.|+++.+++++++.-.+++.++++
T Consensus         8 KGlnPGlIVLlvV~g~ll~flvGnyvlY~Yaqk   40 (69)
T PF04689_consen    8 KGLNPGLIVLLVVAGLLLVFLVGNYVLYVYAQK   40 (69)
T ss_pred             cCCCCCeEEeehHHHHHHHHHHHHHHHHHHHhh
Confidence            567789999999988888877766666655553

S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=93.34  E-value=0.3  Score=36.68  Aligned_cols=69  Identities=28%  Similarity=0.430  Sum_probs=50.3

Q ss_pred             HHHHHHHccCCC-CCccceeeEEEeCCEEEEEEEcccCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 026630          156 QTEVMLLGRLHH-RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHD  228 (235)
Q Consensus       156 ~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~~qi~~gl~yLH~  228 (235)
                      ..|.-++..+.+ +++++++|.|..    +++.||.+.+++...-.. ......+|..+..+|.++++.+++|++
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence            357777888855 699999999843    578999987765421000 111236899999999999999999976

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.26  E-value=0.98  Score=34.87  Aligned_cols=99  Identities=20%  Similarity=0.206  Sum_probs=59.6

Q ss_pred             hccCCCCceeEEEEEeCC--CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEEcccCCC
Q 026630          118 TLIGQGAFGPVYKAQMST--GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      +.|..|-...+|+....+  +..+++|........ .-+...|..++..+...++ +++++.+.    ..+++||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            457778888999987653  567888876543221 1123467777777743333 33333322    248999998866


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      +....       +.   ...++.++++.|+-||+...
T Consensus        79 l~~~~-------~~---~~~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          79 LEPED-------LR---NPKIYRLIARELAKLHSIKP  105 (235)
T ss_pred             CCHHH-------cc---ChHHHHHHHHHHHHHhcccc
Confidence            54221       10   12356778888888997653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2

Probab=92.84  E-value=0.2  Score=31.85  Aligned_cols=24  Identities=17%  Similarity=0.366  Sum_probs=11.5

Q ss_pred             eeehhHHHHHHHHHHHHHHHHhhh
Q 026630            9 IIGISIGVVIGVLLAISALFCFRY   32 (235)
Q Consensus         9 i~~i~~g~~~~~~~~~~~~~~~~~   32 (235)
                      -+++-..++++++++++++++.++
T Consensus        32 ~Lgm~~lvI~~iFil~VilwfvCC   55 (94)
T PF05393_consen   32 NLGMWFLVICGIFILLVILWFVCC   55 (94)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHH
Confidence            344555555555444444443333

; GO: 0016021 integral to membrane

>PF14851 FAM176: FAM176 family

Probab=92.42  E-value=0.84  Score=32.86  Aligned_cols=21  Identities=29%  Similarity=0.393  Sum_probs=12.4

Q ss_pred             eehhHHHHHHHHHHHHHHHHh
Q 026630           10 IGISIGVVIGVLLAISALFCF   30 (235)
Q Consensus        10 ~~i~~g~~~~~~~~~~~~~~~   30 (235)
                      +.++.|+++++++.+++++..
T Consensus        24 LYFv~gVC~GLlLtLcllV~r   44 (153)
T PF14851_consen   24 LYFVSGVCAGLLLTLCLLVIR   44 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            455666666666655555543

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=92.38  E-value=0.13  Score=38.80  Aligned_cols=28  Identities=14%  Similarity=0.282  Sum_probs=18.0

Q ss_pred             ccceeehhHHHHHHHHHHHHHHHHhhhh
Q 026630            6 SGLIIGISIGVVIGVLLAISALFCFRYH   33 (235)
Q Consensus         6 ~~~i~~i~~g~~~~~~~~~~~~~~~~~~   33 (235)
                      ..++++|+.|++..++++++++++++||
T Consensus        37 ~~I~iaiVAG~~tVILVI~i~v~vR~CR   64 (221)
T PF08374_consen   37 VKIMIAIVAGIMTVILVIFIVVLVRYCR   64 (221)
T ss_pred             eeeeeeeecchhhhHHHHHHHHHHHHHh
Confidence            4677777777776666666666665344

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins

Probab=92.35  E-value=0.14  Score=32.05  Aligned_cols=33  Identities=27%  Similarity=0.438  Sum_probs=20.1

Q ss_pred             CccceeehhHHHHHHHHHHHHHHHHhhhhhccc
Q 026630            5 SSGLIIGISIGVVIGVLLAISALFCFRYHRKRS   37 (235)
Q Consensus         5 ~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~   37 (235)
                      +.+++++|+.+-++..++++...+++-+.|+|+
T Consensus        32 s~g~LaGiV~~D~vlTLLIv~~vy~car~r~r~   64 (79)
T PF07213_consen   32 SPGLLAGIVAADAVLTLLIVLVVYYCARPRRRP   64 (79)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence            456777777777776666665555554444333

In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=92.04  E-value=0.042  Score=32.89  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=0.5

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHhhhh
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCFRYH   33 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~   33 (235)
                      ...++|+++++|+++++++++++++.++++
T Consensus        10 vlaavIaG~Vvgll~ailLIlf~iyR~rkk   39 (64)
T PF01034_consen   10 VLAAVIAGGVVGLLFAILLILFLIYRMRKK   39 (64)
T ss_dssp             ---------------------------S--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            446788888888887777776555555444

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=91.24  E-value=1.4  Score=34.12  Aligned_cols=98  Identities=16%  Similarity=0.167  Sum_probs=58.8

Q ss_pred             hccCCCCce-eEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCC---CccceeeEEEeC---CEEEEEEEcc
Q 026630          118 TLIGQGAFG-PVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR---NLVNLVGYCAEK---GQHMLVYVFM  190 (235)
Q Consensus       118 ~~lg~G~~g-~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~~  190 (235)
                      +.++.|+.. .||+.    +..+++|..+..  .....+.+|...+..+...   .++..++.....   ...+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            346666665 47864    234667765432  2234678898888777421   333444333221   2357899999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +|.++.+..       ..  ....++.++++.|.-||+..
T Consensus        77 ~G~~l~~~~-------~~--~~~~l~~~la~~l~~LH~i~  107 (235)
T cd05155          77 EGETATAAA-------LS--DPSEFAEDLADFLAALRQID  107 (235)
T ss_pred             cCCCCCccc-------cC--CHHHHHHHHHHHHHHHhCCC
Confidence            998875432       11  12367888999999999754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF15069 FAM163: FAM163 family

Probab=91.23  E-value=2.2  Score=30.11  Aligned_cols=12  Identities=33%  Similarity=0.329  Sum_probs=4.6

Q ss_pred             eeehhHHHHHHH
Q 026630            9 IIGISIGVVIGV   20 (235)
Q Consensus         9 i~~i~~g~~~~~   20 (235)
                      |.+.+++.++++
T Consensus         8 ItGgILAtVILL   19 (143)
T PF15069_consen    8 ITGGILATVILL   19 (143)
T ss_pred             EechHHHHHHHH
Confidence            334444333333

>PF15050 SCIMP: SCIMP protein

Probab=91.16  E-value=0.69  Score=31.38  Aligned_cols=19  Identities=11%  Similarity=0.352  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 026630           14 IGVVIGVLLAISALFCFRY   32 (235)
Q Consensus        14 ~g~~~~~~~~~~~~~~~~~   32 (235)
                      +++++..+++.++++|.+|
T Consensus        14 VaII~vS~~lglIlyCvcR   32 (133)
T PF15050_consen   14 VAIILVSVVLGLILYCVCR   32 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3334444444455554444

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=91.15  E-value=0.83  Score=33.99  Aligned_cols=22  Identities=32%  Similarity=0.608  Sum_probs=13.9

Q ss_pred             CccceeehhHHHHHHHHHHHHH
Q 026630            5 SSGLIIGISIGVVIGVLLAISA   26 (235)
Q Consensus         5 ~~~~i~~i~~g~~~~~~~~~~~   26 (235)
                      ..+++++|++++++++++++++
T Consensus        77 ~~~iivgvi~~Vi~Iv~~Iv~~   98 (179)
T PF13908_consen   77 ITGIIVGVICGVIAIVVLIVCF   98 (179)
T ss_pred             eeeeeeehhhHHHHHHHhHhhh
Confidence            3578888888777664444333

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.06  E-value=1.8  Score=34.03  Aligned_cols=97  Identities=15%  Similarity=0.156  Sum_probs=58.2

Q ss_pred             cCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEEcccCCChhhh
Q 026630          120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYVFMSKGSLASH  198 (235)
Q Consensus       120 lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L~~~  198 (235)
                      +..|-...+|+... ++..+++|..........-+...|..+++.+...++ +++++..  .  .++|+||+++..+..-
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~~~   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVITLD   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcccccc
Confidence            55677788998874 566788887543322211134678878777754333 3444332  2  3689999998665321


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          199 LYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       199 l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      .      ..+    ...+.++++.|.-||+...
T Consensus        79 ~------~~~----~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        79 Q------FVA----LDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             c------ccC----chhHHHHHHHHHHHhCCCC
Confidence            0      011    1345788888899997653

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=91.01  E-value=0.064  Score=47.36  Aligned_cols=110  Identities=15%  Similarity=0.075  Sum_probs=70.7

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC-ccceeeEEEeCCEEEEEEEcccCC-Chh
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN-LVNLVGYCAEKGQHMLVYVFMSKG-SLA  196 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~g-~L~  196 (235)
                      -.++++++++++.+-...+....+.+...     ....-++++|.+++||| .+..++.+..+...++.++++..+ +-.
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~  323 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA  323 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence            46788888888775422333334443211     23346778899999999 777777777788889999999876 221


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCcccc
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL  234 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr  234 (235)
                      .-.. .....+...+....++.-.++++|||+.--+||
T Consensus       324 ~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~  360 (829)
T KOG0576|consen  324 LEMT-VSEIALEQYQFAYPLRKETRPLAELHSSYKVHR  360 (829)
T ss_pred             ccCC-hhhHhhhhhhhhhhhhhhcccccccccccccCc
Confidence            1110 011123344455667777889999998877776

>PF10873 DUF2668: Protein of unknown function (DUF2668); InterPro: IPR022640 Members in this family of proteins are annotated as cysteine and tyrosine-rich protein 1, however currently no function is known []

Probab=90.96  E-value=2.2  Score=30.12  Aligned_cols=28  Identities=25%  Similarity=0.335  Sum_probs=19.7

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHhh
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCFR   31 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~~   31 (235)
                      .+.+.|.+|+.|+++++.+++.+++|.+
T Consensus        58 lsgtAIaGIVfgiVfimgvva~i~icvC   85 (155)
T PF10873_consen   58 LSGTAIAGIVFGIVFIMGVVAGIAICVC   85 (155)
T ss_pred             cccceeeeeehhhHHHHHHHHHHHHHHh
Confidence            3457889999998888766665555543

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=90.60  E-value=0.36  Score=33.90  Aligned_cols=12  Identities=25%  Similarity=0.412  Sum_probs=6.2

Q ss_pred             HhhhhhcccCCC
Q 026630           29 CFRYHRKRSQIG   40 (235)
Q Consensus        29 ~~~~~r~r~~~~   40 (235)
                      +++++++|++++
T Consensus        18 ~~~~~~rRR~r~   29 (130)
T PF12273_consen   18 LFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHhhc
Confidence            334556666554

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P

Probab=90.52  E-value=0.048  Score=36.50  Aligned_cols=22  Identities=27%  Similarity=0.546  Sum_probs=0.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhc
Q 026630           14 IGVVIGVLLAISALFCFRYHRK   35 (235)
Q Consensus        14 ~g~~~~~~~~~~~~~~~~~~r~   35 (235)
                      +|+++.|+.+++++-||++||+
T Consensus        29 IGiL~VILgiLLliGCWYckRR   50 (118)
T PF14991_consen   29 IGILIVILGILLLIGCWYCKRR   50 (118)
T ss_dssp             SS--------------------
T ss_pred             ceeHHHHHHHHHHHhheeeeec
Confidence            3444444444444555554443

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=90.35  E-value=0.39  Score=42.20  Aligned_cols=23  Identities=26%  Similarity=0.437  Sum_probs=9.4

Q ss_pred             cceeehhHHHHHHHHHHHHHHHHhh
Q 026630            7 GLIIGISIGVVIGVLLAISALFCFR   31 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~~~~~~~~~~~   31 (235)
                      |+|+++++.+  +++++++++++|+
T Consensus       270 WII~gVlvPv--~vV~~Iiiil~~~  292 (684)
T PF12877_consen  270 WIIAGVLVPV--LVVLLIIIILYWK  292 (684)
T ss_pred             EEEehHhHHH--HHHHHHHHHHHHH
Confidence            4445554333  3333333344443

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>PHA03265 envelope glycoprotein D; Provisional

Probab=90.27  E-value=0.14  Score=41.42  Aligned_cols=27  Identities=26%  Similarity=0.527  Sum_probs=13.3

Q ss_pred             CCCccceeehhHHHHHHHHHHHHHHHH
Q 026630            3 GESSGLIIGISIGVVIGVLLAISALFC   29 (235)
Q Consensus         3 ~~~~~~i~~i~~g~~~~~~~~~~~~~~   29 (235)
                      +.+++..+++++|+.++.++++.++++
T Consensus       343 s~~~~~~~g~~ig~~i~glv~vg~il~  369 (402)
T PHA03265        343 SKSNSTFVGISVGLGIAGLVLVGVILY  369 (402)
T ss_pred             CCCCCcccceEEccchhhhhhhhHHHH
Confidence            344555566666555544444433333

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=90.00  E-value=0.28  Score=40.21  Aligned_cols=109  Identities=14%  Similarity=0.051  Sum_probs=68.4

Q ss_pred             hhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--------------------Chh--cHHHHHHHHHHHccCCC--CCc
Q 026630          115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--------------------SKQ--GEKEFQTEVMLLGRLHH--RNL  170 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--------------------~~~--~~~~~~~e~~~l~~l~h--~ni  170 (235)
                      .++++||-|.-+.||.+....|.+.++|.=+..                    ...  .+-+..+|...|+.+..  --+
T Consensus        95 svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpV  174 (465)
T KOG2268|consen   95 SVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPV  174 (465)
T ss_pred             hhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCC
Confidence            356899999999999998878888888752210                    000  11234578888887732  234


Q ss_pred             cceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       171 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+    +.+..++|||++.+-.|.+.-+-     .+.+   .+...+..-+.-|-.+|+||.+
T Consensus       175 Pkpi----D~~RH~Vvmelv~g~Pl~~v~~v-----~d~~---~ly~~lm~~Iv~la~~GlIHgD  227 (465)
T KOG2268|consen  175 PKPI----DHNRHCVVMELVDGYPLRQVRHV-----EDPP---TLYDDLMGLIVRLANHGLIHGD  227 (465)
T ss_pred             CCcc----cccceeeHHHhhcccceeeeeec-----CChH---HHHHHHHHHHHHHHHcCceecc
Confidence            4444    33677899999988777655421     1222   2333334445557789999964

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=89.88  E-value=0.12  Score=44.27  Aligned_cols=51  Identities=18%  Similarity=0.107  Sum_probs=42.9

Q ss_pred             EEEEEEEcccCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++.|++|...+|.++|... .....++...+.++.|++.|++|   ++.+||+
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrd  381 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRD  381 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhh
Confidence            578999999999999999633 33446777889999999999999   9999985

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.78  E-value=7.1  Score=30.65  Aligned_cols=73  Identities=16%  Similarity=0.247  Sum_probs=47.8

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC---CCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .+.-|..-..|.... ...++-+|+-.   ......|..|+.-|..+   +--++++.+..-...+..++|+||++-|.+
T Consensus        23 ~v~gG~inea~~v~d-g~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          23 EVSGGDINEAWRLRD-GTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ccCCccccceeEeec-CCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            355555555565554 45677777643   33445677777655544   445677777777778899999999987554

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=88.75  E-value=0.76  Score=43.69  Aligned_cols=78  Identities=24%  Similarity=0.245  Sum_probs=58.6

Q ss_pred             HHHHHHHHccCCCCCccceeeEEEeCCEE----EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQH----MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       155 ~~~e~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      ...|...+.++.|+|++.++++-......    .+..|++.+-++.+.+.  .....+....+.++.++.+|++|+|+..
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~~  306 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSLS  306 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence            44566778888999999998886543322    24456788888887773  3355778888899999999999999887


Q ss_pred             cccc
Q 026630          231 SCHL  234 (235)
Q Consensus       231 ivHr  234 (235)
                      ..|.
T Consensus       307 l~~v  310 (1351)
T KOG1035|consen  307 LEHV  310 (1351)
T ss_pred             ccee
Confidence            6654

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=88.66  E-value=3.5  Score=33.08  Aligned_cols=95  Identities=16%  Similarity=0.156  Sum_probs=57.6

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC--ccceeeE------EEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN--LVNLVGY------CAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~  189 (235)
                      +.+..|....+|+.... +..+++|.....   .......|+.++..+.+.+  +++++..      ....+..+++++|
T Consensus        20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~   95 (296)
T cd05153          20 EGISAGIENTNYFVTTD-SGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF   95 (296)
T ss_pred             ecccCccccceEEEEeC-CCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence            44777777889988763 446788887542   2234556676666663322  3444331      1223456899999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG  229 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  229 (235)
                      ++|..+..         .+.    ..+.++++.|+-||..
T Consensus        96 i~G~~~~~---------~~~----~~~~~lg~~La~lH~~  122 (296)
T cd05153          96 LAGEHLTR---------PTA----AHCRQIGEALARLHLA  122 (296)
T ss_pred             CCCCCCCC---------CCH----HHHHHHHHHHHHHHHH
Confidence            99866532         122    3456778888888854

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=88.54  E-value=2.8  Score=33.80  Aligned_cols=98  Identities=23%  Similarity=0.313  Sum_probs=59.0

Q ss_pred             ccCCCCceeEEEEEeCC-------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC-ccceeeEEEeCCEEEEEEEcc
Q 026630          119 LIGQGAFGPVYKAQMST-------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN-LVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+..|-...+|+.+...       +..+++|....... ...+...|..++..+...+ .+++++.+..    ..|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence            45566667888887644       47888888654322 2224457777776663322 2344444432    3688999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      +|..+....       +.   ....+.++++.|+.||+...
T Consensus        80 ~G~~l~~~~-------~~---~~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          80 PSRTLTTEE-------LR---DPDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             CCCcCCHhH-------cC---CcHHHHHHHHHHHHhhCCCC
Confidence            886654321       10   12356788999999998654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins

Probab=88.18  E-value=3.3  Score=31.38  Aligned_cols=87  Identities=9%  Similarity=0.014  Sum_probs=0.0

Q ss_pred             cceeehhHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCcccccccccccCCCCccccCCCCCCCCCC---cccCCCCCCC
Q 026630            7 GLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESP---VKSGRNGNGK   83 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   83 (235)
                      +++|++++...++++++++..+|++++|+..++.......+.....+-..........+.+......   ...+...+|.
T Consensus       100 ~~lI~lv~~g~~lLla~~~~~~Y~~~~Rrs~~~~~~rl~Ee~~~vEng~h~n~~l~v~~~~~E~qeK~~~~Ng~~~eng~  179 (202)
T PF06365_consen  100 PTLIALVTSGSFLLLAILLGAGYCCHQRRSWSKKGQRLGEELYTVENGYHDNPTLSVAESQPEMQEKKPSLNGEAQENGT  179 (202)
T ss_pred             eEEEehHHhhHHHHHHHHHHHHHHhhhhccCCcchhhhccCceecccCccCCcccccCCCCcccccccccccCCcccCCC


Q ss_pred             cccccccccc
Q 026630           84 SMWLEGFKRS   93 (235)
Q Consensus        84 ~~~~~~~~~~   93 (235)
                      ..|......+
T Consensus       180 ~~~~~~~g~s  189 (202)
T PF06365_consen  180 GQWIVPNGHS  189 (202)
T ss_pred             CCCCcCCCCc

The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	235
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-23
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-23
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-19
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-19
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		6e-15
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-15
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-15
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		7e-13
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-11
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-11
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		8e-11
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		7e-10
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		9e-10
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-09
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-09
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-09
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-09
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-09
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-09
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-09
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-09
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-09
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-09
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-09
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-09
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-09
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-09
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-09
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-09
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-09
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-09
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-09
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		4e-09
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-09
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		5e-09
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		5e-09
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		5e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-09
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		7e-09
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-09
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		9e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-09
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-08
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-08
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-08
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-08
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-08
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-08
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		5e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		5e-08
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		6e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		6e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		6e-08
3b2t_A	311	Structure Of Phosphotransferase Length = 311		6e-08
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		7e-08
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-08
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		7e-08
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		8e-08
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-08
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		9e-08
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-08
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-07
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-07
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-07
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-07
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-07
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-07
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-07
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-07
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-07
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-07
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-07
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		1e-07
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-07
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-07
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		1e-07
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-07
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-07
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-07
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-07
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-07
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-07
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-07
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-07
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-07
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-07
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-07
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-07
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-07
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-07
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-07
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		4e-07
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		5e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-07
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		6e-07
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		7e-07
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		7e-07
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		9e-07
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-06
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-06
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		3e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-06
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-06
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-06
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-06
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-06
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-06
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		5e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		7e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		7e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-06
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-06
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		9e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		9e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		9e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		9e-06
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		9e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		9e-06
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		9e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-05
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-05
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-05
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		3e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-05
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		6e-05
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		6e-05
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		6e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-05
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		6e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		7e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		7e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		8e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		8e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		9e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		9e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		9e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		9e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-04
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		4e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		5e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		5e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-04
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		5e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		6e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		6e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-04
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-04
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		7e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		7e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
Query: 104 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
           +S ++LQ A+ NF+   ++G+G FG VYK +++ G  VAVK L  +  QG E +FQTEV 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
           ++    HRNL+ L G+C    + +LVY +M+ GS+AS L +  E+  PL W  R  IAL 
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 219 VARGLEYLHD 228
            ARGL YLHD
Sbjct: 148 SARGLAYLHD 157

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 104 YSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
           +S ++LQ A+ NF    ++G+G FG VYK +++ G  VAVK L  +  QG E +FQTEV 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
           ++    HRNL+ L G+C    + +LVY +M+ GS+AS L +  E+  PL W  R  IAL 
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 219 VARGLEYLHD 228
            ARGL YLHD
Sbjct: 140 SARGLAYLHD 149

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 101 IPEYSYK----DLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
           +P  SY+    DL++AT NF    LIG G FG VYK  +  G  VA+K    +S QG +E
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
           F+TE+  L    H +LV+L+G+C E+ + +L+Y +M  G+L  HLY  D     ++W  R
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGVSCH 233
           + I +  ARGL YLH     H
Sbjct: 142 LEICIGAARGLHYLHTRAIIH 162

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 101 IPEYSYK----DLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
           +P  SY+    DL++AT NF    LIG G FG VYK  +  G  VA+K    +S QG +E
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
           F+TE+  L    H +LV+L+G+C E+ + +L+Y +M  G+L  HLY  D     ++W  R
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGVSCH 233
           + I +  ARGL YLH     H
Sbjct: 142 LEICIGAARGLHYLHTRAIIH 162

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 96  VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
           VS +    +S+ +L+  T NF           +G+G FG VYK  ++   TVAVK LA  
Sbjct: 7   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 65
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DE 202
               +++ +++F  E+ ++ +  H NLV L+G+ ++     LVYV+M  GSL   L   +
Sbjct: 66  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              PL+W++R  IA   A G+ +LH+    H
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHIH 156

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 92  RSNVVSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKV 143
           +S  VS +    +S+ +L+  T NF           +G+G FG VYK  ++   TVAVK 
Sbjct: 3   KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKK 61
Query: 144 LAT----DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
           LA      +++ +++F  E+ ++ +  H NLV L+G+ ++     LVYV+M  GSL   L
Sbjct: 62  LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 200 Y-DENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              +   PL+W++R  IA   A G+ +LH+    H
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 96  VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
           VS +    +S+ +L+  T NF           +G+G FG VYK  ++   TVAVK LA  
Sbjct: 1   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 59
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DE 202
               +++ +++F  E+ ++ +  H NLV L+G+ ++     LVYV+M  GSL   L   +
Sbjct: 60  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              PL+W++R  IA   A G+ +LH+    H
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHHIH 150

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 104 YSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT----DSKQG 151
           +S+ +L+  T NF            G+G FG VYK  ++   TVAVK LA      +++ 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEEL 64
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWN 210
           +++F  E+ +  +  H NLV L+G+ ++     LVYV+   GSL   L   +   PL+W+
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 211 LRVHIALDVARGLEYLHDGVSCH 233
            R  IA   A G+ +LH+    H
Sbjct: 125 XRCKIAQGAANGINFLHENHHIH 147

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99  SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
           S  P+     L      +   IG+G FG V+K ++   ++V A+K L     +GE     
Sbjct: 6   SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
             +EFQ EV ++  L+H N+V L G      +  +V  F+  G L   L D+ + P+ W+
Sbjct: 66  KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
           +++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99  SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
           S  P+     L      +   IG+G FG V+K ++   ++V A+K L     +GE     
Sbjct: 6   SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
             +EFQ EV ++  L+H N+V L G      +  +V  F+  G L   L D+ + P+ W+
Sbjct: 66  KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
           +++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99  SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
           S  P+     L      +   IG+G FG V+K ++   ++V A+K L     +GE     
Sbjct: 6   SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
             +EFQ EV ++  L+H N+V L G      +  +V  F+  G L   L D+ + P+ W+
Sbjct: 66  KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
           +++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
           D+     N    IG G+FG V++A+   G  VAVK+L       E+  EF  EV ++ RL
Sbjct: 33  DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLE 224
            H N+V  +G   +     +V  ++S+GSL   L+       L    R+ +A DVA+G+ 
Sbjct: 92  RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHD 228
           YLH+
Sbjct: 152 YLHN 155

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
           D+     N    IG G+FG V++A+   G  VAVK+L       E+  EF  EV ++ RL
Sbjct: 33  DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLE 224
            H N+V  +G   +     +V  ++S+GSL   L+       L    R+ +A DVA+G+ 
Sbjct: 92  RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHD 228
           YLH+
Sbjct: 152 YLHN 155

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 92  RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
           R++ +     P YS+        DL++      TLI   G GAFG VY+ Q+S      +
Sbjct: 1   RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L    S+Q E +F  E +++ +L+H+N+V  +G   +     ++   M+ G 
Sbjct: 61  PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
           L S L +    P     L     +H+A D+A G +YL +    H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
           G P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E
Sbjct: 1   GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
             ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  
Sbjct: 60  AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
           ++  +EYL      H
Sbjct: 120 ISSAMEYLEKKNFIH 134

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
           G P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E
Sbjct: 1   GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
             ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  
Sbjct: 60  AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
           ++  +EYL      H
Sbjct: 120 ISSAMEYLEKKNFIH 134

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
           G P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E
Sbjct: 1   GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
             ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  
Sbjct: 60  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
           ++  +EYL      H
Sbjct: 120 ISSAMEYLEKKNFIH 134

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
           G P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E
Sbjct: 1   GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
             ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  
Sbjct: 60  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
           ++  +EYL      H
Sbjct: 120 ISSAMEYLEKKNFIH 134

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ +L+H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 95  FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 99  SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQT 157
            G P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  
Sbjct: 13  QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 71
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           E  ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A 
Sbjct: 72  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 218 DVARGLEYLHDGVSCH 233
            ++  +EYL      H
Sbjct: 132 QISSAMEYLEKKNFIH 147

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92  RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
           R++ +     P YS+        DL++      TLI   G GAFG VY+ Q+S      +
Sbjct: 1   RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L    S+Q E +F  E +++ + +H+N+V  +G   +     ++   M+ G 
Sbjct: 61  PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
           L S L +    P     L     +H+A D+A G +YL +    H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92  RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
           R++ +     P YS+        DL++      TLI   G GAFG VY+ Q+S      +
Sbjct: 27  RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 86
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L    S+Q E +F  E +++ + +H+N+V  +G   +     ++   M+ G 
Sbjct: 87  PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 146
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
           L S L +    P     L     +H+A D+A G +YL +    H
Sbjct: 147 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 190

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92  RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
           R++ +     P YS+        DL++      TLI   G GAFG VY+ Q+S      +
Sbjct: 1   RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L    S+Q E +F  E +++ + +H+N+V  +G   +     ++   M+ G 
Sbjct: 61  PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
           L S L +    P     L     +H+A D+A G +YL +    H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92  RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
           R++ +     P YS+        DL++      TLI   G GAFG VY+ Q+S      +
Sbjct: 7   RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L    S+Q E +F  E +++ + +H+N+V  +G   +     ++   M+ G 
Sbjct: 67  PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
           L S L +    P     L     +H+A D+A G +YL +    H
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 170

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 210 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 268
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 329 SAMEYLEKKNFIH 341

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 8   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++
Sbjct: 67  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 127 SAMEYLEKKNFIH 139

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 4   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 63  VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 123 SAMEYLEKKNFIH 135

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 249 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 307
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 221 RGLEYL 226
             +EYL
Sbjct: 368 SAMEYL 373

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 8   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 67  VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 127 SAMEYLEKKNFIH 139

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHD 228
              +H+A D+A G +YL +
Sbjct: 140 LDLLHVARDIACGCQYLEE 158

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 80  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHD 228
              +H+A D+A G +YL +
Sbjct: 140 LDLLHVARDIACGCQYLEE 158

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 12  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 72  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 210 NLRVHIALDVARGLEYLHD 228
              +H+A D+A G +YL +
Sbjct: 132 LDLLHVARDIACGCQYLEE 150

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 64  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 124 SAMEYLEKKNFIH 136

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 4   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 63  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 123 SAMEYLEKKNFIH 135

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 37  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 97  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 157 LDLLHVARDIACGCQYLEENHFIH 180

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 8   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 67  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 127 SAMEYLEKKNFIH 139

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIH 204

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 38  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 98  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 158 LDLLHVARDIACGCQYLEENHFIH 181

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 8   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 67  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 127 SAMEYLEKKNFIH 139

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 64  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 124 SAMEYLEKKNFIH 136

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 64  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 124 SAMEYLEKKNFIH 136

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
           S  DL++      TLI   G GAFG VY+ Q+S      +   VAVK L    S+Q E +
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
           F  E +++ + +H+N+V  +G   +     ++   M+ G L S L +    P     L  
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
              +H+A D+A G +YL +    H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 7   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 65
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 66  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 126 SAMEYLEKKNFIH 138

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +   S   E +F  E  ++ +L H 
Sbjct: 24  IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHP 82
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV+ FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 83  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 141
Query: 229 GVSCH 233
               H
Sbjct: 142 ACVIH 146

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 8   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 67  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 127 SAMEYLEKKNFIH 139

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H 
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 60
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV+ FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 61  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 119
Query: 229 GVSCH 233
               H
Sbjct: 120 ACVIH 124

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H 
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV+ FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 229 GVSCH 233
               H
Sbjct: 122 ACVIH 126

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H 
Sbjct: 7   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 65
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV+ FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 66  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 124
Query: 229 GVSCH 233
               H
Sbjct: 125 ACVIH 129

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 62  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 122 SAMEYLEKKNFIH 134

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
           P Y   ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++  + H NLV L+G C  +    ++  FM+ G+L  +L + N   +   + +++A  ++
Sbjct: 62  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGVSCH 233
             +EYL      H
Sbjct: 122 SAMEYLEKKNFIH 134

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H 
Sbjct: 4   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV+ FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 229 GVSCH 233
               H
Sbjct: 122 ASVIH 126

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK----QGEKEFQTEVMLLG 163
           ++  A      +IG G FG VY+A    G+ VAVK    D      Q  +  + E  L  
Sbjct: 3   EIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
            L H N++ L G C ++    LV  F   G L   L  +   P   ++ V+ A+ +ARG+
Sbjct: 62  MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGM 118
Query: 224 EYLHD 228
            YLHD
Sbjct: 119 NYLHD 123

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           ++++        +G G FG VY+        TVAVK L  D+ + E EF  E  ++  + 
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++  +EYL
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 HDGVSCH 233
                 H
Sbjct: 126 EKKNFIH 132

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
            Q        +  +G FG V+KAQ+   E VAVK+     KQ  +  + EV  L  + H 
Sbjct: 21  FQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHE 78
Query: 169 NLVNLVGYCAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
           N++  +G  AEK          L+  F  KGSL+  L       ++WN   HIA  +ARG
Sbjct: 79  NILQFIG--AEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARG 133
Query: 223 LEYLHDGV 230
           L YLH+ +
Sbjct: 134 LAYLHEDI 141

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
           +  +   F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H 
Sbjct: 5   IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            LV L G C E+    LV  FM  G L+ +L  +  G       + + LDV  G+ YL +
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 122
Query: 229 GVSCH 233
               H
Sbjct: 123 ACVIH 127

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  ++  + 
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++  +EYL
Sbjct: 66  HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 H 227
Sbjct: 126 E 126

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 113 TCNFTTLIGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV 171
           T + T ++G G FG V+K  + +TG  +A K++ T   + ++E + E+ ++ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
            L      K   +LV  ++  G L   + DE+Y  LT    +     +  G+ ++H    
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYI 208
Query: 232 CHL 234
            HL
Sbjct: 209 LHL 211

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           ++++        +G G +G VY+        TVAVK L  D+ + E EF  E  ++  + 
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++  +EYL
Sbjct: 66  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 HDGVSCH 233
                 H
Sbjct: 126 EKKNFIH 132

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S    K+F  E  LL  L H ++V  
Sbjct: 21  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-------------LTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L   L    +GP             LT +  +HIA  +A
Sbjct: 81  YGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 221 RGLEYL 226
            G+ YL
Sbjct: 139 AGMVYL 144

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           + +     +  +G FG V+KAQ+   + VAVK+     KQ  +  + E+     + H NL
Sbjct: 14  RGSLQLLEIKARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENL 71
Query: 171 VNLVGYCAEKGQHM-----LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
           +  +    ++G ++     L+  F  KGSL  +L       +TWN   H+A  ++RGL Y
Sbjct: 72  LQFIA-AEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSY 127
Query: 226 LHDGV 230
           LH+ V
Sbjct: 128 LHEDV 132

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+G FG V  A+             TVAVK+L  D
Sbjct: 65  VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 226

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG V++  + +TG   A K + T  +  ++  + E+  +  L H  LVNL     
Sbjct: 59  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
           +  + +++Y FMS G L   + DE +  ++ +  V     V +GL ++H+    HL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHL 173

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+G FG V  A+             TVAVK+L  D
Sbjct: 11  VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 70
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 71  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 172

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+G FG V  A+             TVAVK+L  D
Sbjct: 8   VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 67
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 68  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 169

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+G FG V  A+             TVAVK+L  D
Sbjct: 6   VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 65
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 66  ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 167

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG V++  + +TG   A K + T  +  ++  + E+  +  L H  LVNL     
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
           +  + +++Y FMS G L   + DE +  ++ +  V     V +GL ++H+    HL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHL 279

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G   E
Sbjct: 20  IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            KG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL 
Sbjct: 77  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G   E
Sbjct: 29  IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            KG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL 
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G   E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            KG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL 
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N+++L+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G   E
Sbjct: 14  IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            KG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL 
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
           VS   +PE    +  +        +G+GAFG V  A+             TVAVK+L  D
Sbjct: 19  VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++ L+G C + G   ++  + SKG+L  +L      
Sbjct: 79  ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                YD N  P   +T+   V     +ARG+EYL      H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 51  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 167

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 52  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 168

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 25  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 85  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 141

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 144

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 147

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 146

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 12  VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 72  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 4   VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 63
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 64  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 123
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 158

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G++YL
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S+   ++FQ E  LL  L H+++V  
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L   L              D   GPL     + +A  VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 221 RGLEYL 226
            G+ YL
Sbjct: 169 AGMVYL 174

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 5   VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 64
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 65  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 124
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 159

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 12  VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 72  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S+   ++FQ E  LL  L H+++V  
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L   L              D   GPL     + +A  VA
Sbjct: 80  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 221 RGLEYL 226
            G+ YL
Sbjct: 140 AGMVYL 145

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 12  VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 72  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   S+   ++FQ E  LL  L H+++V  
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
            G C E    ++V+ +M  G L   L              D   GPL     + +A  VA
Sbjct: 86  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 221 RGLEYL 226
            G+ YL
Sbjct: 146 AGMVYL 151

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 53  VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 112
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
                Y+ ++ P   L+    V  A  VARG+EYL      H
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 214

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
           Y  L      F  +IG+G FG V KA++       +    ++    SK   ++F  E+ +
Sbjct: 19  YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
           L +L HH N++NL+G C  +G   L   +   G+L   L               +     
Sbjct: 79  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 207 LTWNLRVHIALDVARGLEYL 226
           L+    +H A DVARG++YL
Sbjct: 139 LSSQQLLHFAADVARGMDYL 158

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
           Y  L      F  +IG+G FG V KA++       +    ++    SK   ++F  E+ +
Sbjct: 16  YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
           L +L HH N++NL+G C  +G   L   +   G+L   L               +     
Sbjct: 76  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 207 LTWNLRVHIALDVARGLEYL 226
           L+    +H A DVARG++YL
Sbjct: 136 LSSQQLLHFAADVARGMDYL 155

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           ++++        +G G +G VY         TVAVK L  D+ + E EF  E  ++  + 
Sbjct: 28  EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 86
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           H NLV L+G C  +    +V  +M  G+L  +L + N   +T  + +++A  ++  +EYL
Sbjct: 87  HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 227 H 227
Sbjct: 147 E 147

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 208

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
           Y  L      F  +IG+G FG V KA++       +    ++    SK   ++F  E+ +
Sbjct: 9   YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
           L +L HH N++NL+G C  +G   L   +   G+L   L               +     
Sbjct: 69  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 207 LTWNLRVHIALDVARGLEYL 226
           L+    +H A DVARG++YL
Sbjct: 129 LSSQQLLHFAADVARGMDYL 148

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 38  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 98  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 154

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
           VS   +PE    +L +        +G+GAFG V         K + +    VAVK+L +D
Sbjct: 12  VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
           + + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L      
Sbjct: 72  ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
                ++ ++ P   L+    V  A  VARG+EYL
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +  + G+ +  AVK L   +  GE  +F TE +++    H N
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +++L+G C   +G  ++V  +M  G L + + +E + P   +L +   L VA+G+++L
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 147

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATDSKQGE 152
           +PE    +L +        +G+GAFG V         K + +    VAVK+L +D+ + +
Sbjct: 2   LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
             +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L           
Sbjct: 62  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYL 226
           Y+ ++ P   L+    V  A  VARG+EYL
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL 151

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVM 160
           +  +   N    +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ 
Sbjct: 23  EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 161 LLGRL-HHRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LT 208
           +L  + HH N+VNL+G C + G  ++V V F   G+L+++L         Y + Y   LT
Sbjct: 83  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 209 WNLRVHIALDVARGLEYL 226
               +  +  VA+G+E+L
Sbjct: 143 LEHLIXYSFQVAKGMEFL 160

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATDSKQGE 152
           +PE    +L +        +G+GAFG V         K + +    VAVK+L +D+ + +
Sbjct: 6   LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 65
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
             +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+L  +L           
Sbjct: 66  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 125
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
           Y+ ++ P   L+    V  A  VARG+EYL      H
Sbjct: 126 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 162

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 21/128 (16%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDEN-----YGP-------LTWNLRVHIALD 218
           NL+G C + G  ++V V F   G+L+++L  +      Y P       LT    +  +  
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 219 VARGLEYL 226
           VA+G+E+L
Sbjct: 157 VAKGMEFL 164

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 89  GFKRSNVVSASGIPEYSYK-DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD 147
           G +  N +   G  + SY  +++ +    +T IG G+FG VYK +      VAVK+L   
Sbjct: 12  GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVV 69
Query: 148 SKQGE--KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
               E  + F+ EV +L +  H N++  +GY   K    +V  +    SL  HL+ +   
Sbjct: 70  DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETK 128
Query: 206 PLTWNLRVHIALDVARGLEYLH 227
              + L + IA   A+G++YLH
Sbjct: 129 FQMFQL-IDIARQTAQGMDYLH 149

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 120 IGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+GAFG V+ A+            VAVK L   +    K+FQ E  LL  L H ++V  
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 174 VGYCAEKGQHMLVYVFMSKGSL----------ASHLYD----ENYGPLTWNLRVHIALDV 219
            G C +    ++V+ +M  G L          A  L D    +  G L  +  +HIA  +
Sbjct: 83  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 220 ARGLEYL 226
           A G+ YL
Sbjct: 143 ASGMVYL 149

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVM 160
           +  +   N    +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ 
Sbjct: 23  EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 161 LLGRL-HHRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LT 208
           +L  + HH N+VNL+G C + G  ++V V F   G+L+++L         Y + Y   LT
Sbjct: 83  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 209 WNLRVHIALDVARGLEYL 226
               +  +  VA+G+E+L
Sbjct: 143 LEHLICYSFQVAKGMEFL 160

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V   +      +TGE VAVK L  +S      + + E+ +L  L+H N+V  
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            G C E G +   L+  F+  GSL  +L  +N   +    ++  A+ + +G++YL
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V   +      +TGE VAVK L  +S      + + E+ +L  L+H N+V  
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            G C E G +   L+  F+  GSL  +L  +N   +    ++  A+ + +G++YL
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
           L++       ++G GAFG VYK   +  GETV    A+K+L  T   +   EF  E +++
Sbjct: 35  LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
             + H +LV L+G C       LV   M  G L  ++++  +N G     L ++  + +A
Sbjct: 95  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 150
Query: 221 RGLEYLHDGVSCH 233
           +G+ YL +    H
Sbjct: 151 KGMMYLEERRLVH 163

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
           L++       ++G GAFG VYK   +  GETV    A+K+L  T   +   EF  E +++
Sbjct: 12  LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
             + H +LV L+G C       LV   M  G L  ++++  +N G     L ++  + +A
Sbjct: 72  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 127
Query: 221 RGLEYLHDGVSCH 233
           +G+ YL +    H
Sbjct: 128 KGMMYLEERRLVH 140

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 17  FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  F+  GSL  +L            R+ HI L      + +G
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYL 226
           +EYL
Sbjct: 130 MEYL 133

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           ++G+G FG   K     TGE + +K L    ++ ++ F  EV ++  L H N++  +G  
Sbjct: 17  VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 178 AEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLH 227
            +  +   +  ++  G+L   +   D  Y    W+ RV  A D+A G+ YLH
Sbjct: 77  YKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVSFAKDIASGMAYLH 125

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG V++  + +TG     K + T     +   + E+ ++ +LHH  L+NL     
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
           +K + +L+  F+S G L   +  E+Y  ++    ++       GL+++H+    HL
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHSIVHL 173

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNL 173
              L+G G +G VYK + + TG+  A+KV+     + E+E + E+ +L +  HHRN+   
Sbjct: 28  LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATY 86
Query: 174 VGYCAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G   +K       Q  LV  F   GS+   + +     L      +I  ++ RGL +LH
Sbjct: 87  YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 228 DGVSCH 233
                H
Sbjct: 147 QHKVIH 152

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
           K++  +      +IG G FG V    +         VA+K L +  +++  ++F +E  +
Sbjct: 28  KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M++  FM  GSL S L  +N G  T    V +   +A 
Sbjct: 88  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 146
Query: 222 GLEYLHDGVSCH 233
           G++YL D    H
Sbjct: 147 GMKYLADMNYVH 158

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
           K++  +      +IG G FG V    +         VA+K L +  +++  ++F +E  +
Sbjct: 2   KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M++  FM  GSL S L  +N G  T    V +   +A 
Sbjct: 62  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 120
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 121 GMKYLAD 127

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           L+G+G++G V K +   TG  VA+K    + D K  +K    E+ LL +L H NLVNL+ 
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 176 YCAEKGQHMLVYVFMS 191
            C +K +  LV+ F+ 
Sbjct: 92  VCKKKKRWYLVFEFVD 107

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 19  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 79  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 131
Query: 223 LEYL 226
           +EYL
Sbjct: 132 MEYL 135

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 21  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 81  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 133
Query: 223 LEYL 226
           +EYL
Sbjct: 134 MEYL 137

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-H 166
           N    +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + H
Sbjct: 31  NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 167 HRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP-----------LTWNLR 212
           H N+VNL+G C + G  ++V V F   G+L+++L  +   + P           LT    
Sbjct: 91  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 213 VHIALDVARGLEYL 226
           +  +  VA+G+E+L
Sbjct: 151 ICYSFQVAKGMEFL 164

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYL 226
           +EYL
Sbjct: 130 MEYL 133

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 18  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 78  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 130
Query: 223 LEYL 226
           +EYL
Sbjct: 131 MEYL 134

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 20  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 80  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 132
Query: 223 LEYL 226
           +EYL
Sbjct: 133 MEYL 136

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 13  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 73  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 125
Query: 223 LEYL 226
           +EYL
Sbjct: 126 MEYL 129

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 15  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 75  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 127
Query: 223 LEYL 226
           +EYL
Sbjct: 128 MEYL 131

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
           +EYL
Sbjct: 127 MEYL 130

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 157
Query: 223 LEYL 226
           +EYL
Sbjct: 158 MEYL 161

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 12  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 72  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 124
Query: 223 LEYL 226
           +EYL
Sbjct: 125 MEYL 128

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
           +EYL
Sbjct: 127 MEYL 130

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYL 226
           +EYL
Sbjct: 145 MEYL 148

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
           +EYL
Sbjct: 127 MEYL 130

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
           V   G C   G+    L+  ++  GSL  +L            R+ HI L      + +G
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYL 226
           +EYL
Sbjct: 145 MEYL 148

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      +  T  TVAVK+L   +   E K   TE+ +L  + HH N+V
Sbjct: 35  LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYVFMSK-GSLASHL 199
           NL+G C ++G  ++V V   K G+L+++L
Sbjct: 95  NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 321
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 322 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
Query: 103 EYSYK---DLQKATCNFTTLIGQGAFGPVYKAQM----STGET--VAVKVLATDSKQGEK 153
           EY Y    +  +    F  ++G GAFG V  A       TG +  VAVK+L   +   E+
Sbjct: 33  EYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 92
Query: 154 E-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY----------- 200
           E   +E+ ++ +L  H N+VNL+G C   G   L++ +   G L ++L            
Sbjct: 93  EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 201 ----------DENYGPLTWNLRVHIALDVARGLEYLH 227
                     +E+   LT+   +  A  VA+G+E+L 
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
           F   +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHL 199
           V   G C   G+    L+  ++  GSL  +L
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKAQ   T    A KV+ T S++  +++  E+ +L    H N+V L+    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +    ++  F + G++ + +  E   PLT +    +       L YLHD    H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKAQ   T    A KV+ T S++  +++  E+ +L    H N+V L+    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +    ++  F + G++ + +  E   PLT +    +       L YLHD    H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKAQ   T    A KV+ T S++  +++  E+ +L    H N+V L+    
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +    ++  F + G++ + +  E   PLT +    +       L YLHD    H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 239 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 192 FQVAKGMEFL 201

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 86  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 239 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 65
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 66  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 157 FQVAKGMEFL 166

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L  +   + P            LT    +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 91  KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
           K+S VV    +P+  +  L          IG+G FG V+  ++    T VAVK     L 
Sbjct: 94  KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
            D K    +F  E  +L +  H N+V L+G C +K    +V   +  G   + L  E   
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGVSCH 233
                LRV   L    D A G+EYL      H
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCCIH 236

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  ++++  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIYIVIE-YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  ++++  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIYIVIE-YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 108 DLQKATCNFTT-----------LIGQGAFGPVYKAQMSTGE-----TVAVKVLATDSKQG 151
           D  +A   FTT           +IG G FG VYK  + T        VA+K L     + 
Sbjct: 29  DPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK 88
Query: 152 EK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
           ++ +F  E  ++G+  H N++ L G  ++    M++  +M  G+L   L +++ G  +  
Sbjct: 89  QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVL 147
Query: 211 LRVHIALDVARGLEYLHDGVSCH 233
             V +   +A G++YL +    H
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVH 170

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 91  KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
           K+S VV    +P+  +  L          IG+G FG V+  ++    T VAVK     L 
Sbjct: 94  KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
            D K    +F  E  +L +  H N+V L+G C +K    +V   +  G   + L  E   
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGVSCH 233
                LRV   L    D A G+EYL      H
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCCIH 236

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG--EKEFQTEVMLLGRLHHRNLVNLVGYC 177
           +G+G +G VYKA+ S G  VA+K +  D++          E+ LL  LHH N+V+L+   
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDEN 203
             +    LV+ FM K      + DEN
Sbjct: 89  HSERCLTLVFEFMEKD--LKKVLDEN 112

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG--EKEFQTEVMLLGRLHHRNLVNLVGYC 177
           +G+G +G VYKA+ S G  VA+K +  D++          E+ LL  LHH N+V+L+   
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDEN 203
             +    LV+ FM K      + DEN
Sbjct: 89  HSERCLTLVFEFMEKD--LKKVLDEN 112

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 94  NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
           N  S +G+  Y   ++      F   +G G FG V   +      VA+K++   S   E 
Sbjct: 7   NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
           EF  E  ++  L H  LV L G C ++    ++  +M+ G L ++L +  +   T  L +
Sbjct: 65  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGVSCH 233
            +  DV   +EYL      H
Sbjct: 124 EMCKDVCEAMEYLESKQFLH 143

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 3   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 61
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 62  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 94  NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
           N  S +G+  Y   ++      F   +G G FG V   +      VA+K++   S   E 
Sbjct: 7   NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
           EF  E  ++  L H  LV L G C ++    ++  +M+ G L ++L +  +   T  L +
Sbjct: 65  EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGVSCH 233
            +  DV   +EYL      H
Sbjct: 124 EMCKDVCEAMEYLESKQFLH 143

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 5   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 64  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 4   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+    +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 63  EKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 239 EKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           K Q  +V  +    SL  HL+  +         + IA   ARG++YLH
Sbjct: 91  KPQLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 137

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 28  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V F   G+L+++L
Sbjct: 88  NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 30  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V F   G+L+++L
Sbjct: 90  NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
           K++  +   F   +G+  FG VYK  +   + GE    VA+K L  D  +G   +EF+ E
Sbjct: 21  KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 79
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DENY--- 204
            ML  RL H N+V L+G   +     +++ + S G L   L            D++    
Sbjct: 80  AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 205 GPLTWNLRVHIALDVARGLEYL 226
             L     VH+   +A G+EYL
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYL 161

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY   
Sbjct: 20  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           K Q  +V  +    SL  HL+  +         + IA   ARG++YLH
Sbjct: 79  KPQLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 125

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
           K++  +      +IG G FG V   ++         VA+K L A  + +  ++F +E  +
Sbjct: 24  KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M++  +M  GSL + L  +N G  T    V +   +  
Sbjct: 84  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 142
Query: 222 GLEYLHDGVSCH 233
           G++YL D  + H
Sbjct: 143 GMKYLSDMSAVH 154

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
           K++  +   F   +G+  FG VYK  +   + GE    VA+K L  D  +G   +EF+ E
Sbjct: 4   KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 62
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DENY--- 204
            ML  RL H N+V L+G   +     +++ + S G L   L            D++    
Sbjct: 63  AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 205 GPLTWNLRVHIALDVARGLEYL 226
             L     VH+   +A G+EYL
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYL 144

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V F   G+L+++L
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 120 IGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
           IG+GAFG V++A+            VAVK+L  + S   + +FQ E  L+    + N+V 
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL 199
           L+G CA      L++ +M+ G L   L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
           NL+G C + G  ++V V F   G+L+++L
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
            ++G+G +G VY  + +S    +A+K +     +  +    E+ L   L H+N+V  +G 
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 177 CAEKGQHMLVYVFMSK---GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGVS 231
            +E G    + +FM +   GSL++ L    +GPL  N +        +  GL+YLHD   
Sbjct: 88  FSENG---FIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 232 CH 233
            H
Sbjct: 144 VH 145

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRH 239
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 240 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 30  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------ASHL 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L         + L
Sbjct: 90  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
             E+  PL     +H +  VA+G+ +L
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFL 176

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 119 LIGQGAFGPVYKAQMS----TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G+G FG V +  +     T   VAVK +  D  S++  +EF +E   +    H N++ 
Sbjct: 41  ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 173 LVGYCAEKGQH-----MLVYVFMSKGSLASHLYDENY--GP--LTWNLRVHIALDVARGL 223
           L+G C E         M++  FM  G L ++L       GP  +     +   +D+A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 224 EYL 226
           EYL
Sbjct: 161 EYL 163

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATD-SKQGEKEFQTEVML 161
           K++  +      +IG G FG V     KA       VA+K L    +++  +EF +E  +
Sbjct: 11  KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G        M++  FM  G+L S L   N G  T    V +   +A 
Sbjct: 71  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHDGVSCH 233
           G+ YL +    H
Sbjct: 130 GMRYLAEMSYVH 141

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 22  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------ASHL 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L         + L
Sbjct: 82  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
             E+  PL     +H +  VA+G+ +L
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFL 168

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATD-SKQGEKEFQTEVML 161
           K++  +      +IG G FG V     KA       VA+K L    +++  +EF +E  +
Sbjct: 9   KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G        M++  FM  G+L S L   N G  T    V +   +A 
Sbjct: 69  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIAS 127
Query: 222 GLEYLHDGVSCH 233
           G+ YL +    H
Sbjct: 128 GMRYLAEMSYVH 139

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
            ++G+G +G VY  + +S    +A+K +     +  +    E+ L   L H+N+V  +G 
Sbjct: 14  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 177 CAEKGQHMLVYVFMSK---GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGVS 231
            +E G    + +FM +   GSL++ L    +GPL  N +        +  GL+YLHD   
Sbjct: 74  FSENG---FIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 232 CH 233
            H
Sbjct: 130 VH 131

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 28  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 88  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 146
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 147 GMKYLSD 153

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMS-TGE---TVAVKVLATD-SKQGEKEFQTEVML 161
           K+++ +      +IG G FG V   ++   G+    VA+K L    +++  ++F  E  +
Sbjct: 17  KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M+V  +M  GSL + L  +N G  T    V +   ++ 
Sbjct: 77  MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISA 135
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 136 GMKYLSD 142

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
           ++G G FG V+K   +  GE++ + V     + K G + FQ  T+ ML +G L H ++V 
Sbjct: 38  VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L+G C       LV  ++  GSL  H+  ++ G L   L ++  + +A+G+ YL +    
Sbjct: 98  LLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 233 H 233
           H
Sbjct: 156 H 156

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++      F   +G G FG V   +      VA+K++   S   E EF  E  ++  L H
Sbjct: 5   EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L G C ++    ++  +M+ G L ++L +  +   T  L + +  DV   +EYL 
Sbjct: 64  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 122
Query: 228 DGVSCH 233
                H
Sbjct: 123 SKQFLH 128

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V   F   G+L+++L  +   + P            LT    +  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V   F   G+L+++L  +   + P            LT    +  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLG 163
           Y   ++      F   +G G FG V   +      VA+K++   S   E EF  E  ++ 
Sbjct: 7   YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMM 65
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
            L H  LV L G C ++    ++  +M+ G L ++L +  +   T  L + +  DV   +
Sbjct: 66  NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAM 124
Query: 224 EYLHDGVSCH 233
           EYL      H
Sbjct: 125 EYLESKQFLH 134

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++      F   +G G FG V   +      VA+K++   S   E EF  E  ++  L H
Sbjct: 4   EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L G C ++    ++  +M+ G L ++L +  +   T  L + +  DV   +EYL 
Sbjct: 63  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 121
Query: 228 DGVSCH 233
                H
Sbjct: 122 SKQFLH 127

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ ++ H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKGSL   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 130 GMKYLSD 136

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
           NL+G C + G  ++V   F   G+L+++L  +   + P            LT    +  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
           ++G G FG V+K   +  GE++ + V     + K G + FQ  T+ ML +G L H ++V 
Sbjct: 20  VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L+G C       LV  ++  GSL  H+  ++ G L   L ++  + +A+G+ YL +    
Sbjct: 80  LLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 233 H 233
           H
Sbjct: 138 H 138

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
            F   +G G FG V   +      VA+K++   S   E EF  E  ++  L H  LV L 
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           G C ++    ++  +M+ G L ++L +  +   T  L + +  DV   +EYL      H
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQFLH 123

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++      F   +G G FG V   +      VA+K++   S   E EF  E  ++  L H
Sbjct: 5   EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L G C ++    ++  +M+ G L ++L +  +   T  L + +  DV   +EYL 
Sbjct: 64  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 122
Query: 228 DGVSCH 233
                H
Sbjct: 123 SKQFLH 128

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 38  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V  +M  GSL S L   +    T    V +   +A 
Sbjct: 98  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 156
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 157 GMKYLSD 163

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVML 161
           K+L  +      +IG G FG V   ++         VA+K L    +++  ++F  E  +
Sbjct: 38  KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+V+L G        M+V  FM  G+L + L   + G  T    V +   +A 
Sbjct: 98  MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQLVGMLRGIAA 156
Query: 222 GLEYLHD 228
           G+ YL D
Sbjct: 157 GMRYLAD 163

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +G G FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 5   EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +M+KGSL   L D     L     V +A  VA G+ Y+ 
Sbjct: 64  DKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           ++G+GAFG V KA+    + VA+K + ++S++  K F  E+  L R++H N+V L G C 
Sbjct: 16  VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI---ALDVARGLEYLH 227
                 LV  +   GSL + L+     PL +    H     L  ++G+ YLH
Sbjct: 73  NPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLH 120

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKA+   TG   A KV+ T S++  +++  E+ +L    H  +V L+G   
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             G+  ++  F   G++ + + + + G     ++V +   +   L +LH     H
Sbjct: 87  HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIH 140

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
            YK+++        ++G+GAFG V KA+    + VA+K + ++S++  K F  E+  L R
Sbjct: 6   DYKEIE-----VEEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSR 57
Query: 165 LHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI---ALDVAR 221
           ++H N+V L G C       LV  +   GSL + L+     PL +    H     L  ++
Sbjct: 58  VNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQ 113
Query: 222 GLEYLH 227
           G+ YLH
Sbjct: 114 GVAYLH 119

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG VYKA+   TG   A KV+ T S++  +++  E+ +L    H  +V L+G   
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             G+  ++  F   G++ + + + + G     ++V +   +   L +LH     H
Sbjct: 79  HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIH 132

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
           K++  +      +IG G FG V   ++         VA+K L A  + +  ++F +E  +
Sbjct: 3   KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M++  +M  GSL + L  +N G  T    V +   +  
Sbjct: 63  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 121
Query: 222 GLEYLHDGVSCH 233
           G++YL D    H
Sbjct: 122 GMKYLSDMSYVH 133

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
           K++  +      +IG G FG V   ++         VA+K L A  + +  ++F +E  +
Sbjct: 9   KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N+++L G   +    M++  +M  GSL + L  +N G  T    V +   +  
Sbjct: 69  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 127
Query: 222 GLEYLHDGVSCH 233
           G++YL D    H
Sbjct: 128 GMKYLSDMSYVH 139

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKG L   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +M+KGSL   L  E    L     V ++  +A G+ Y+ 
Sbjct: 70  EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +M+KGSL   L  E    L     V ++  +A G+ Y+ 
Sbjct: 70  EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V   M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGVSCH 233
           G++YL D  + H
Sbjct: 159 GMKYLSDMGAVH 170

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           D+         LIG+G FG VY  +      + +  +  D++   K F+ EVM   +  H
Sbjct: 29  DIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            N+V  +G C     H+ +   + KG     +  +    L  N    IA ++ +G+ YLH
Sbjct: 89  ENVVLFMGACMSP-PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L    +E+  + +V  +MSKG L   L  E    L     V +A  +A G+ Y+ 
Sbjct: 73  EKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             Q  +V  +    SL  HL+  +         + IA   ARG++YLH
Sbjct: 92  P-QLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 137

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 119 LIGQGAFGPVYKAQMSTGE----TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G+G FG V +AQ+   +     VAVK+L  D  +    +EF  E   +    H ++  
Sbjct: 30  MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 173 LVGYCAE---KGQ---HMLVYVFMSKGSLASHLYDENYGPLTWNLR----VHIALDVARG 222
           LVG       KG+    M++  FM  G L + L     G   +NL     V   +D+A G
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 223 LEYL 226
           +EYL
Sbjct: 150 MEYL 153

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V   M  GSL S L   +    T    V +   +A 
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 130 GMKYLSD 136

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +G G FG V+    +    VAVK L   +    + F  E  L+  L H
Sbjct: 8   EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 66
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L     ++    ++  FM+KGSL   L  +  G +     +  +  +A G+ Y+ 
Sbjct: 67  DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
           K+L     +   ++G G FG V   ++        +VA+K L    +++  ++F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G   +    M+V   M  GSL S L   +    T    V +   +A 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
           G++YL D
Sbjct: 159 GMKYLSD 165

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
           IGQG FG V+KA+   TG+ VA+K VL  + K+G       E+ +L  L H N+VNL+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
           C  K 
Sbjct: 86  CRTKA 90

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
           IGQG FG V+KA+   TG+ VA+K VL  + K+G       E+ +L  L H N+VNL+  
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 177 CAEKG 181
           C  K 
Sbjct: 85  CRTKA 89

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
           IGQG FG V+KA+   TG+ VA+K VL  + K+G       E+ +L  L H N+VNL+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
           C  K 
Sbjct: 86  CRTKA 90

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 30  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L + L        
Sbjct: 90  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 200 ---YDENYGP---LTWNLRVHIALDVARGLEYL 226
              Y+ ++ P   L+    +H +  VA+G+ +L
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL 182

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
           IGQG FG V+KA+   TG+ VA+K VL  + K+G       E+ +L  L H N+VNL+  
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
           C  K 
Sbjct: 86  CRTKA 90

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 155

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 43  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 154

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 155

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 36  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 95  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 147

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 132

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 18  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 77  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 129

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 75  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 75  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
           PE+   ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L
Sbjct: 2   PEW---EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANL 57
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           + +L H+ LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A 
Sbjct: 58  MKQLQHQRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 222 GLEYLHDGVSCH 233
           G+ ++ +    H
Sbjct: 117 GMAFIEERNYIH 128

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY + 
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           K Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 80  KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 132

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           NF T + +   G ++K +   G  + VKVL     S +  ++F  E   L    H N++ 
Sbjct: 13  NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 173 LVGYC-AEKGQH-MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           ++G C +    H  L+  +M  GSL + L++     +  +  V  ALD+ARG+ +LH
Sbjct: 72  VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKAQ + GET A+K +  + K+ E    T   E+ +L  L H N+V L   
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              K + +LV+  + +      L D   G L         L +  G+ Y HD    H
Sbjct: 69  IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 1   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYD--ENYGPLT 208
            +E Q    ++ +L H N+V L  +    G+   +VY+ +    +   +Y    +Y    
Sbjct: 61  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 209 WNLRV-HIAL---DVARGLEYLHDGVSCH 233
             L V ++ L    + R L Y+H    CH
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICH 145

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKAQ + GET A+K +  + K+ E    T   E+ +L  L H N+V L   
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              K + +LV+  + +      L D   G L         L +  G+ Y HD    H
Sbjct: 69  IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKAQ + GET A+K +  + K+ E    T   E+ +L  L H N+V L   
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              K + +LV+  + +      L D   G L         L +  G+ Y HD    H
Sbjct: 69  IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V           TGE VAVK L  D   Q    ++ E+ +L  L+H +++  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G C ++G+    LV  ++  GSL  +L   + G     L    A  +  G+ YLH
Sbjct: 82  KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 134

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V           TGE VAVK L  D   Q    ++ E+ +L  L+H +++  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G C ++G+    LV  ++  GSL  +L   + G     L    A  +  G+ YLH
Sbjct: 82  KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 134

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 75
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 76  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 228 DGVSCH 233
           +    H
Sbjct: 135 ERNYIH 140

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 33  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 85  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 179

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 18  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 69
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 70  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 125
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 126 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 164

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 63  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 228 DGVSCH 233
           +    H
Sbjct: 122 ERNYIH 127

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 70  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 228 DGVSCH 233
           +    H
Sbjct: 129 ERNYIH 134

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 35  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 86
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 87  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 142
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 143 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 181

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGET----VAVKVLATD-SKQGEKEFQTEVMLL 162
           L++       ++G GAFG VYK   +  GE     VA+KVL  + S +  KE   E  ++
Sbjct: 14  LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
             +    +  L+G C       LV   M  G L  H+  EN G L     ++  + +A+G
Sbjct: 74  AGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKG 131
Query: 223 LEYLHD 228
           + YL D
Sbjct: 132 MSYLED 137

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 37  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 88
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 89  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 144
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 145 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 183

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 7   DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 58
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 59  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 114
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 115 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 153

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 76
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 77  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 228 DGVSCH 233
           +    H
Sbjct: 136 ERNYIH 141

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 68  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
           +    H
Sbjct: 127 ERNYIH 132

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 33  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 85  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 179

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 11  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 63  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 157

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 68
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 69  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 228 DGVSCH 233
           +    H
Sbjct: 128 ERNYIH 133

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 27  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 78
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 79  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 134
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 135 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 173

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 68  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
           +    H
Sbjct: 127 ERNYIH 132

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 74  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGVSCH 233
           +    H
Sbjct: 133 ERNYIH 138

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 74  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGVSCH 233
           +    H
Sbjct: 133 ERNYIH 138

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 12  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 63
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 64  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 119
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 120 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 158

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 77
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 78  QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 228 DGVSCH 233
           +    H
Sbjct: 137 ERNYIH 142

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 68  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
           +    H
Sbjct: 127 ERNYIH 132

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 11  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 63  KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 157

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + T      +G G FG V+    +    VAVK L   S   +  F  E  L+ +L H
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           + LV L     ++  +++   +M  GSL   L   +   LT N  + +A  +A G+ ++ 
Sbjct: 73  QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 228 DGVSCH 233
           +    H
Sbjct: 132 ERNYIH 137

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88  EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
           +G K + VV+  G       E SY D        T +IG G+FG VY+A++  +GE VA+
Sbjct: 78  DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 129
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
           K +  D +   +E Q    ++ +L H N+V L  +    G+         +L YV  +  
Sbjct: 130 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 185
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +A H            +++++   + R L Y+H    CH
Sbjct: 186 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 224

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           ++ + +      +G G FG V+    +    VAVK L   +    + F  E  L+  L H
Sbjct: 9   EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
             LV L      +    ++  +M+KGSL   L  +  G +     +  +  +A G+ Y+ 
Sbjct: 68  DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLVG 175
           +G G    VY A+ +     VA+K +    ++ E   K F+ EV    +L H+N+V+++ 
Sbjct: 19  LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              E   + LV  ++   +L+ ++  E++GPL+ +  ++    +  G+++ HD    H
Sbjct: 79  VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMS 191
              + +  LV+ F+S
Sbjct: 74  IHTENKLYLVFEFLS 88

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMS 191
              + +  LV+ F+S
Sbjct: 74  IHTENKLYLVFEFLS 88

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMS 191
              + +  LV+ F+S
Sbjct: 72  IHTENKLYLVFEFLS 86

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMS 191
              + +  LV+ F+S
Sbjct: 73  IHTENKLYLVFEFLS 87

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 5   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 64
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 65  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 120
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 121 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 149

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 1   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 61  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 1   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 61  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 6   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 65
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 66  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 121
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 122 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 150

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 15  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L + L
Sbjct: 75  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 1   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 61  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
           S V +    P       Q+ +   T +IG G+FG VY+A++  +GE VA+K +  D +  
Sbjct: 2   SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 61
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
            +E Q    ++ +L H N+V L  +    G+         +L YV  +   +A H     
Sbjct: 62  NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 117
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +++++   + R L Y+H    CH
Sbjct: 118 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 146

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +   +F   +G GAFG V +A      +     TVAVK+L   + 
Sbjct: 7   IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E+E   +E+ +L  L +H N+VNL+G C   G  +++  +   G L + L
Sbjct: 67  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +   +F   +G GAFG V +A      +     TVAVK+L   + 
Sbjct: 23  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E+E   +E+ +L  L +H N+VNL+G C   G  +++  +   G L + L
Sbjct: 83  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +   +F   +G GAFG V +A      +     TVAVK+L   + 
Sbjct: 25  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E+E   +E+ +L  L +H N+VNL+G C   G  +++  +   G L + L
Sbjct: 85  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 136

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
           +L++        +G G FG V   +      VAVK++   S   E EF  E   + +L H
Sbjct: 4   ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             LV   G C+++    +V  ++S G L ++L     G L  +  + +  DV  G+ +L
Sbjct: 63  PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFL 120

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 30  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L + L
Sbjct: 90  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +    F   +G GAFG V +A      +      VAVK+L + + 
Sbjct: 30  IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             EKE   +E+ ++  L  H N+VNL+G C   G  +++  +   G L + L
Sbjct: 90  ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +   +F   +G GAFG V +A      +     TVAVK+L   + 
Sbjct: 30  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E+E   +E+ +L  L +H N+VNL+G C   G  +++  +   G L + L
Sbjct: 90  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
           +  + +P     +  +   +F   +G GAFG V +A      +     TVAVK+L   + 
Sbjct: 30  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E+E   +E+ +L  L +H N+VNL+G C   G  +++  +   G L + L
Sbjct: 90  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV-YKAQMSTGE---TVAVKVL-ATDSKQGEKEFQTEVML 161
           ++++ +  +   +IG G  G V Y      G+    VA+K L A  +++  ++F +E  +
Sbjct: 44  REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G        M+V  +M  GSL + L   + G  T    V +   V  
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHD 228
           G+ YL D
Sbjct: 163 GMRYLSD 169

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           F   +GQG F  ++K          Q+   E V +KVL    +   + F     ++ +L 
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
           H++LV   G C    +++LV  F+  GSL ++L  ++N   + W L V  A  +A  + +
Sbjct: 71  HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAAAMHF 128
Query: 226 LHDGVSCH 233
           L +    H
Sbjct: 129 LEENTLIH 136

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G+FG VYK +      V +  +   + Q  + F+ EV +L +  H N++  +GY   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             Q  +V  +    SL  HL+          L + IA   A+G++YLH     H
Sbjct: 76  P-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV-YKAQMSTGE---TVAVKVL-ATDSKQGEKEFQTEVML 161
           ++++ +  +   +IG G  G V Y      G+    VA+K L A  +++  ++F +E  +
Sbjct: 44  REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +G+  H N++ L G        M+V  +M  GSL + L   + G  T    V +   V  
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHD 228
           G+ YL D
Sbjct: 163 GMRYLSD 169

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
           V A  I E    +  +        +G+G FG V KA        +   TVAVK+L  ++ 
Sbjct: 7   VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E ++  +E  +L +++H +++ L G C++ G  +L+  +   GSL   L
Sbjct: 67  PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE- 154
           G P+Y    + +       ++G+G FG VY+   +   GE   VAVK    D     KE 
Sbjct: 15  GSPQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
           F +E +++  L H ++V L+G   E+   +++ ++   G L  H  + N   L     V 
Sbjct: 72  FMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVL 129
Query: 215 IALDVARGLEYLHDGVSC 232
            +L + + + YL + ++C
Sbjct: 130 YSLQICKAMAYL-ESINC 146

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
           V A  I E    +  +        +G+G FG V KA        +   TVAVK+L  ++ 
Sbjct: 7   VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E ++  +E  +L +++H +++ L G C++ G  +L+  +   GSL   L
Sbjct: 67  PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
           V A  I E    +  +        +G+G FG V KA        +   TVAVK+L  ++ 
Sbjct: 7   VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
             E ++  +E  +L +++H +++ L G C++ G  +L+  +   GSL   L
Sbjct: 67  PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 97  SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVL--ATDSKQG-E 152
           ++SG P+   +            +G+G FG VY A+       VA+KVL  +   K+G E
Sbjct: 8   NSSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
            + + E+ +   LHH N++ L  Y  ++ +  L+  +  +G L   L
Sbjct: 68  HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 75  IHTENKLYLVFEFLHQ 90

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 110 QKATCNFTTLIGQGAFGPVYKA----QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGR 164
           ++   +   +IG+G FG VY      Q       A+K L+  ++  + E F  E +L+  
Sbjct: 19  ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 165 LHHRNLVNLVGY-CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
           L+H N++ L+G     +G   ++  +M  G L   +      P   +L +   L VARG+
Sbjct: 79  LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGM 137
Query: 224 EYLHDGVSCH 233
           EYL +    H
Sbjct: 138 EYLAEQKFVH 147

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 71  IHTENKLYLVFEFLHQ 86

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 78  IHTENKLYLVFEFLHQ 93

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 74  IHTENKLYLVFEFL 87

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 73  IHTENKLYLVFEFL 86

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 74  IHTENKLYLVFEFLHQ 89

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 72  IHTENKLYLVFEFLHQ 87

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 71  IHTENKLYLVFEFL 84

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 74  IHTENKLYLVFEFLHQ 89

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 71  IHTENKLYLVFEFLHQ 86

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 73  IHTENKLYLVFEFL 86

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 72  IHTENKLYLVFEFL 85

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 71  IHTENKLYLVFEFLHQ 86

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 70  IHTENKLYLVFEFLHQ 85

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 71  IHTENKLYLVFEFL 84

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 71  IHTENKLYLVFEFL 84

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 92  RSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ 150
           R+  +    + E  +KD  +   +    IG G+FG VY A+ +   E VA+K ++   KQ
Sbjct: 34  RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 93
Query: 151 GEKEFQT---EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
             +++Q    EV  L +L H N +   G C  +     + +    GS AS L + +  PL
Sbjct: 94  SNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPL 151
Query: 208 TWNLRVHIALDVARGLEYLHDGVSCH 233
                  +     +GL YLH     H
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHNMIH 177

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 71  IHTENKLYLVFEFL 84

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 75  IHTENKLYLVFEFLHQ 90

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 70  IHTENKLYLVFEFLHQ 85

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V           TGE VAVK L  D+  Q    ++ E+ +L  L+H +++  
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G C + G     LV  ++  GSL  +L   + G     L    A  +  G+ YLH
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 151

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 72  IHTENKLYLVFEFL 85

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 73  IHTENKLYLVFEFL 86

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
              + +  LV+ F+
Sbjct: 71  IHTENKLYLVFEFL 84

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 70  IHTENKLYLVFEFLHQ 85

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 78  IHTENKLYLVFEFLHQ 93

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
            +G+G F  VYKA+  +T + VA+K +     +++K G  +    E+ LL  L H N++ 
Sbjct: 17  FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L+     K    LV+ FM +  L   + D +      +++ ++ + + +GLEYLH     
Sbjct: 77  LLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLHQHWIL 134
Query: 233 H 233
           H
Sbjct: 135 H 135

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 70  IHTENKLYLVFEFLHQ 85

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 72  IHTENKLYLVFEFLHQ 87

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
           IG+G +G VYKA+   TGE VA+K +  D++ +G       E+ LL  L+H N+V L+  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
              + +  LV+ F+ +
Sbjct: 71  IHTENKLYLVFEFLHQ 86

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
           +G G +  VYK    +TG  VA+K +  DS++G       E+ L+  L H N+V L    
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 178 AEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             + +  LV+ FM    K  + S         L  NL  +    + +GL + H+    H
Sbjct: 73  HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
           F   +GQG F  ++K          Q+   E V +KVL    +   + F     ++ +L 
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
           H++LV   G C    +++LV  F+  GSL ++L  ++N   + W L V  A  +A  + +
Sbjct: 71  HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAWAMHF 128
Query: 226 LHDGVSCH 233
           L +    H
Sbjct: 129 LEENTLIH 136

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
           ++G+G FG VY+   +   GE   VAVK    D     KE F +E +++  L H ++V L
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           +G   E+   +++ ++   G L  H  + N   L     V  +L + + + YL + ++C
Sbjct: 79  IGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYL-ESINC 134

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
           ++G+G FG VY+   +   GE   VAVK    D     KE F +E +++  L H ++V L
Sbjct: 15  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           +G   E+   +++ ++   G L  H  + N   L     V  +L + + + YL + ++C
Sbjct: 75  IGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYL-ESINC 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-63
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-59
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-59
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-38
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-34
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-33
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-33
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-33
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-32
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-32
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-31
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-31
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-29
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-29
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-28
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-28
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-28
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-28
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-24
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-24
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-23
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-23
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-23
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	6e-23
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-23
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-23
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-23
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-22
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-22
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-22
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-22
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-22
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-22
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-22
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-22
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-22
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	8e-22
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	8e-22
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-21
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-21
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-21
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-21
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-21
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-21
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-21
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-21
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-21
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	7e-21
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-21
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-20
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-20
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-20
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-20
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-20
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-20
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-20
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-20
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-20
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-19
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-19
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-19
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-19
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-19
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-19
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-19
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-19
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-19
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-19
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-18
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-18
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	9e-18
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-17
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-16
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-16
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-15
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-14
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-14
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-14
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-14
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-13
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-12
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-12
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-12
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-12
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-12
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-11
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-11
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	7e-11
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-10
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-10
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-10
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	6e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-10
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-09
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-08
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-08
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-08
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-07
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-07
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	7e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	7e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	8e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  198 bits (507), Expect = 3e-63
 Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 4/130 (3%)

Query: 104 YSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
               DL++AT NF    LIG G FG VYK  +  G  VA+K    +S QG +EF+TE+  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDV 219
           L    H +LV+L+G+C E+ + +L+Y +M  G+L  HLY  D     ++W  R+ I +  
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148

Query: 220 ARGLEYLHDG 229
           ARGL YLH  
Sbjct: 149 ARGLHYLHTR 158

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  188 bits (479), Expect = 3e-59
 Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 14/146 (9%)

Query: 96  VSASGIPEYSYKDLQKATCNF--------TTLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
           VS +    +S+ +L+  T NF           +G+G FG VYK  ++   TVAVK LA  
Sbjct: 7   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 65

Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-E 202
               +++ +++F  E+ ++ +  H NLV L+G+ ++     LVYV+M  GSL   L   +
Sbjct: 66  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125

Query: 203 NYGPLTWNLRVHIALDVARGLEYLHD 228
              PL+W++R  IA   A G+ +LH+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHE 151

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  188 bits (481), Expect = 3e-59
 Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 5/130 (3%)

Query: 104 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
           +S ++LQ A+ NF+   ++G+G FG VYK +++ G  VAVK L  +  QG E +FQTEV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG--PLTWNLRVHIALD 218
           ++    HRNL+ L G+C    + +LVY +M+ GS+AS L +      PL W  R  IAL 
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139

Query: 219 VARGLEYLHD 228
            ARGL YLHD
Sbjct: 140 SARGLAYLHD 149

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  133 bits (337), Expect = 6e-38
 Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 11/137 (8%)

Query: 97  SASGIPEYSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
             S   +   ++L   +       +  +G FG V+KAQ+   E VAVK+     KQ   +
Sbjct: 7   HHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSW-Q 64

Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
            + EV  L  + H N++  +G             L+  F  KGSL+  L       ++WN
Sbjct: 65  NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWN 121

Query: 211 LRVHIALDVARGLEYLH 227
              HIA  +ARGL YLH
Sbjct: 122 ELCHIAETMARGLAYLH 138

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  122 bits (307), Expect = 8e-34
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 16/140 (11%)

Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-- 152
              S +P  +  +++     +   IG+G FG V+K + +     VA+K L     +GE  
Sbjct: 8   FPKSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62

Query: 153 -----KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
                +EFQ EV ++  L+H N+V L G         +V  F+  G L   L D+   P+
Sbjct: 63  MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKA-HPI 119

Query: 208 TWNLRVHIALDVARGLEYLH 227
            W++++ + LD+A G+EY+ 
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ 139

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  120 bits (304), Expect = 3e-33
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G+G FG   K     TGE + +K L    ++ ++ F  EV ++  L H N++  +G   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +  +   +  ++  G+L   +   +     W+ RV  A D+A G+ YLH 
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHS 126

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  121 bits (305), Expect = 3e-33
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 16/134 (11%)

Query: 103 EYSYKDLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTE-- 158
           E +  +      N     LIG+G +G VYK  +     VAVKV    S    + F  E  
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVF---SFANRQNFINEKN 57

Query: 159 VMLLGRLHHRNLVNLVGYCAE-----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
           +  +  + H N+   +          + +++LV  +   GSL  +L         W    
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSC 114

Query: 214 HIALDVARGLEYLH 227
            +A  V RGL YLH
Sbjct: 115 RLAHSVTRGLAYLH 128

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  120 bits (302), Expect = 6e-33
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
               IG G+FG V++A+   G  VAVK+L       +   EF  EV ++ RL H N+V  
Sbjct: 41  IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYG-PLTWNLRVHIALDVARGLEYLH 227
           +G   +     +V  ++S+GSL   L+       L    R+ +A DVA+G+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  116 bits (293), Expect = 6e-32
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 10/126 (7%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLG 163
           +K L      F T + +   G ++K +   G  + VKVL     S +  ++F  E   L 
Sbjct: 9   FKQLN-----FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLR 62

Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
              H N++ ++G C          +  +M  GSL + L++     +  +  V  ALD+AR
Sbjct: 63  IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122

Query: 222 GLEYLH 227
           G+ +LH
Sbjct: 123 GMAFLH 128

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  117 bits (294), Expect = 9e-32
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL 165
           YK+++        ++G+GAFG V KA+    + VA+K + ++S+   K F  E+  L R+
Sbjct: 7   YKEIE-----VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRV 58

Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLE 224
           +H N+V L G C       LV  +   GSL + L+  E     T    +   L  ++G+ 
Sbjct: 59  NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 225 YLH 227
           YLH
Sbjct: 117 YLH 119

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  117 bits (294), Expect = 1e-31
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 77  GRNGNGKSMWLEGFKRSNVVSASGIPEY--SYKDLQKATCNFTTLIGQGAFGPVYKAQMS 134
           G   N   +    F R    ++  + E+   ++ L+        LIG+G FG VY  +  
Sbjct: 1   GPEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLE-----IGELIGKGRFGQVYHGRWH 55

Query: 135 TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK 192
            GE VA++++    D++   K F+ EVM   +  H N+V  +G C       ++      
Sbjct: 56  -GE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKG 113

Query: 193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            +L S + D     L  N    IA ++ +G+ YLH
Sbjct: 114 RTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLH 147

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  113 bits (286), Expect = 7e-31
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           IG G FG VY+A    G+ VAVK        D  Q  +  + E  L   L H N++ L G
Sbjct: 15  IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            C ++    LV  F   G L   L  +    +  ++ V+ A+ +ARG+ YLH
Sbjct: 74  VCLKEPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLH 122

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  110 bits (277), Expect = 4e-29
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 18/140 (12%)

Query: 97  SASGIPEYSY----KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE 152
           S SG+P        K +Q         IG+G +G V+  +   GE VAVKV  T  +   
Sbjct: 23  SGSGLPLLVQRTIAKQIQ-----MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA-S 75

Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYC----AEKGQHMLVYVFMSKGSLASHLYDENYGPLT 208
              +TE+     + H N++  +           Q  L+  +   GSL  +L       L 
Sbjct: 76  WFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLD 132

Query: 209 WNLRVHIALDVARGLEYLHD 228
               + +A     GL +LH 
Sbjct: 133 AKSMLKLAYSSVSGLCHLHT 152

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  110 bits (276), Expect = 7e-29
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 22/141 (15%)

Query: 97  SASGIPEYSY----KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGE 152
           S SG+P        + +          IG+G FG V++ +   GE VAVK+    S + E
Sbjct: 28  SGSGLPLLVQRTIARTIV-----LQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREE 78

Query: 153 KEFQTE--VMLLGRLHHRNLVNLVGYCAEKG----QHMLVYVFMSKGSLASHLYDENYGP 206
           + +  E  +     L H N++  +    +      Q  LV  +   GSL  +L       
Sbjct: 79  RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---T 135

Query: 207 LTWNLRVHIALDVARGLEYLH 227
           +T    + +AL  A GL +LH
Sbjct: 136 VTVEGMIKLALSTASGLAHLH 156

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  106 bits (268), Expect = 4e-28
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           IG G+FG VYK +      VAVK+L     + Q  + F+ EV +L +  H N++  +GY 
Sbjct: 32  IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
               Q  +V  +    SL  HL+            + IA   ARG++YLH
Sbjct: 90  -TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH 137

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  106 bits (266), Expect = 8e-28
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQ--TEVMLLGRLHHRNLVNL 173
               +G+G +G V++     GE VAVK+    S + EK +   TE+     L H N++  
Sbjct: 12  LLECVGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGF 67

Query: 174 VGYC----AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           +           Q  L+  +   GSL  +L       L     + I L +A GL +LH
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLH 122

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 97.0 bits (242), Expect = 4e-24
 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 24/152 (15%)

Query: 94  NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE------TVAVKVLATD 147
              S + +     +D+          +G+GAFG V+ A+            VAVK L   
Sbjct: 28  QYFSDACVHHIKRRDIV-----LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA 82

Query: 148 SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
           S+   ++FQ E  LL  L H+++V   G C E    ++V+ +M  G L   L        
Sbjct: 83  SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAK 142

Query: 200 -----YDENYGPLTWNLRVHIALDVARGLEYL 226
                 D   GPL     + +A  VA G+ YL
Sbjct: 143 LLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 174

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 96.9 bits (242), Expect = 8e-24
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           IG+G FG V+  ++    T VAVK          + +F  E  +L +  H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +K    +V   +  G   + L       L     + +  D A G+EYL  
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLES 231

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 93.5 bits (233), Expect = 5e-23
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G G +G VY+         VAVK L  D+ +  +EF  E  ++  + H NLV L+G C 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            +    ++  FM+ G+L  +L + N   ++  + +++A  ++  +EYL
Sbjct: 80  REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 94.4 bits (235), Expect = 5e-23
 Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 19/207 (9%)

Query: 32  YHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFK 91
           +H        +S      +P  + G+D    + + +        S      ++++ +G  
Sbjct: 9   HHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGS------ENLYFQGAN 62

Query: 92  RSNVVSASGIPEYS------YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAV 141
             ++  ++  PE                 +F  +IG+G FG VY   +   +      AV
Sbjct: 63  TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122

Query: 142 KVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAEK-GQHMLVYVFMSKGSLASHL 199
           K L   +  GE  +F TE +++    H N+++L+G C    G  ++V  +M  G L + +
Sbjct: 123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
            +E     T    +   L VA+G+++L
Sbjct: 183 RNET-HNPTVKDLIGFGLQVAKGMKFL 208

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 93.5 bits (233), Expect = 6e-23
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 97  SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQ 150
           S   +     +D+          +G+GAFG V+ A+            VAVK L   +  
Sbjct: 5   SGIHVQHIKRRDIV-----LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA 59

Query: 151 GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
             K+FQ E  LL  L H ++V   G C +    ++V+ +M  G L   L           
Sbjct: 60  ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119

Query: 200 ---YDENYGPLTWNLRVHIALDVARGLEYL 226
                +  G L  +  +HIA  +A G+ YL
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYL 149

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 94.4 bits (235), Expect = 6e-23
 Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 92  RSNVVSASGIPEYSYKDLQKATC----------NFTTLIGQGAFGPVYKAQ------MST 135
           R++ +     P Y +     +                 +G GAFG VY+ Q        +
Sbjct: 41  RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 100

Query: 136 GETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
              VAVK L     + ++ +F  E +++ + +H+N+V  +G   +     ++   M+ G 
Sbjct: 101 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 160

Query: 195 LASHL-----YDENYGPLTWNLRVHIALDVARGLEYL 226
           L S L            L     +H+A D+A G +YL
Sbjct: 161 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 92.7 bits (231), Expect = 7e-23
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC-A 178
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G    
Sbjct: 29  IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           EKG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 93.6 bits (233), Expect = 8e-23
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 120 IGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+G FG V          +TG  VAVK L       +++FQ E+ +L  LH   +V   
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90

Query: 175 GYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           G     G+    LV  ++  G L   L   +   L  +  +  +  + +G+EYL  
Sbjct: 91  GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGS 145

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 92.3 bits (230), Expect = 9e-23
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG G FG V+       + VA+K +   +   E++F  E  ++ +L H  LV L G C E
Sbjct: 16  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 74

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    LV  FM  G L+ +L     G       + + LDV  G+ YL
Sbjct: 75  QAPICLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYL 120

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 93.1 bits (232), Expect = 1e-22
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 120 IGQGAFGPVYKAQMSTGE------TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +G GAFG VY+ Q+S          VAVK L     + ++ +F  E +++ + +H+N+V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYL 226
            +G   +     ++   M+ G L S L            L     +H+A D+A G +YL
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 120 IGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+V   
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77

Query: 175 GYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           G C   G+    L+  ++  GSL  +L   +   +     +     + +G+EYL  
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGT 132

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 94.0 bits (234), Expect = 2e-22
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC-A 178
           IG+G FG V       G  VAVK +  D+    + F  E  ++ +L H NLV L+G    
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           EKG   +V  +M+KGSL  +L       L  +  +  +LDV   +EYL
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 120 IGQGAFGPVYKA-----QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+G FG V        Q +TGE VAVK L   +++  ++F+ E+ +L  L H N+V   
Sbjct: 49  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108

Query: 175 GYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           G C   G+    L+  ++  GSL  +L   +   +     +     + +G+EYL  
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGT 163

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 93.7 bits (233), Expect = 3e-22
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G G +G VY+         VAVK L  D+ +  +EF  E  ++  + H NLV L+G C 
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +    ++  FM+ G+L  +L + N   ++  + +++A  ++  +EYL  
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 90.7 bits (226), Expect = 4e-22
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V   +      VA+K++   S   E EF  E  ++  L H  LV L G C +
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    ++  +M+ G L ++L  E          + +  DV   +EYL
Sbjct: 91  QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYL 136

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 90.4 bits (225), Expect = 8e-22
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 94  NVVSASGIPEYS------YKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKV 143
           ++  ++  PE                 +F  +IG+G FG VY   +   +      AVK 
Sbjct: 1   HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 60

Query: 144 LATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYD 201
           L   +  GE  +F TE +++    H N+++L+G C   +G  ++V  +M  G L + + +
Sbjct: 61  LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN 120

Query: 202 ENYGPLTWNLRVHIALDVARGLEYLHD 228
           E     T    +   L VA+G++YL  
Sbjct: 121 ET-HNPTVKDLIGFGLQVAKGMKYLAS 146

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 90.8 bits (226), Expect = 8e-22
 Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 15/122 (12%)

Query: 120 IGQGAFGPVYKAQMSTGE------TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +GQG+FG VY+              VA+K +   +   E+ EF  E  ++   +  ++V 
Sbjct: 33  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--------YDENYGPLTWNLRVHIALDVARGLE 224
           L+G  ++    +++   M++G L S+L         +    P + +  + +A ++A G+ 
Sbjct: 93  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152

Query: 225 YL 226
           YL
Sbjct: 153 YL 154

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 90.4 bits (225), Expect = 8e-22
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V   +      +TGE VAVK L          + + E+ +L  L+H N+V  
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88

Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G C E G +   L+  F+  GSL  +L   N   +    ++  A+ + +G++YL  
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGS 144

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 90.9 bits (226), Expect = 8e-22
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 16/123 (13%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V +AQ+   +     VAVK+L  D  +    +EF  E   +    H ++  L
Sbjct: 31  LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90

Query: 174 VGYCAEKG---QHMLVYV---FMSKGSLASHL----YDENYGPLTWNLRVHIALDVARGL 223
           VG         +  +  V   FM  G L + L      EN   L     V   +D+A G+
Sbjct: 91  VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150

Query: 224 EYL 226
           EYL
Sbjct: 151 EYL 153

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 90.8 bits (226), Expect = 8e-22
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGE---TVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNL 170
           F  +IG+G FG V KA++         A+K +   + + +  +F  E+ +L +L HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL--------------YDENYGPLTWNLRVHIA 216
           +NL+G C  +G   L   +   G+L   L               +     L+    +H A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148

Query: 217 LDVARGLEYL 226
            DVARG++YL
Sbjct: 149 ADVARGMDYL 158

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V   +      VAVK++   S   E EF  E   + +L H  LV   G C++
Sbjct: 16  LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSK 74

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    +V  ++S G L ++L       L  +  + +  DV  G+ +L
Sbjct: 75  EYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFL 120

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 89.7 bits (223), Expect = 1e-21
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 9/117 (7%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
            IG+G+F  VYK     T   VA   L     +K   + F+ E  +L  L H N+V    
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 176 YC--AEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                 KG+  +V V   M+ G+L ++L  + +  +   +       + +GL++LH 
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHT 147

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 89.3 bits (222), Expect = 2e-21
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 9/115 (7%)

Query: 120 IGQGAFGPVYKA-------QMSTGET-VAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV 171
           +GQG F  ++K             ET V +KVL    +   + F     ++ +L H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
              G C    +++LV  F+  GSL ++L  +N   +    ++ +A  +A  + +L
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFL 129

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 88.8 bits (221), Expect = 3e-21
 Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE------TVAVKVL-ATDSKQGEK 153
           + E S   ++     F   +G+  FG VYK  +           VA+K L         +
Sbjct: 3   LKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 57

Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------------- 199
           EF+ E ML  RL H N+V L+G   +     +++ + S G L   L              
Sbjct: 58  EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117

Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
                  L     VH+   +A G+EYL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYL 144

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 89.3 bits (222), Expect = 3e-21
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 15/122 (12%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V +  +   +     VAVK +  D  S++  +EF +E   +    H N++ L
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101

Query: 174 VGYCAEKGQH-----MLVYVFMSKGSLASHL----YDENYGPLTWNLRVHIALDVARGLE 224
           +G C E         M++  FM  G L ++L     +     +     +   +D+A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161

Query: 225 YL 226
           YL
Sbjct: 162 YL 163

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 90.6 bits (225), Expect = 3e-21
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
               +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H  LV L  
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA 246

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             +E+    +V  +MSKGSL   L  E    L     V +A  +A G+ Y+  
Sbjct: 247 VVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 90.7 bits (225), Expect = 3e-21
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 2/111 (1%)

Query: 116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
               +GQG FG V+    +    VA+K L   +   E  F  E  ++ +L H  LV L  
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA 329

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             +E+    +V  +MSKGSL   L  E    L     V +A  +A G+ Y+
Sbjct: 330 VVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V+    +    VAVK L   S      F  E  L+ +L H+ LV L     +
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 79

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    ++  +M  GSL   L   +   LT N  + +A  +A G+ ++
Sbjct: 80  EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 88.5 bits (220), Expect = 5e-21
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 11/117 (9%)

Query: 120 IGQGAFGPVYKA-----QMSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G+G FG V           TGE VAVK L  D   Q    ++ E+ +L  L+H +++  
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98

Query: 174 VGYCAEKGQ--HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            G C + G     LV  ++  GSL  +L   +   +     +  A  +  G+ YLH 
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 152

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 88.4 bits (220), Expect = 6e-21
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)

Query: 120 IGQGAFGPVYKAQMSTGE-----TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G GAFG VYK             VA+K L    S +  KE   E  ++  + + ++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +G C       L+   M  G L  ++  E+   +     ++  + +A+G+ YL
Sbjct: 83  LGIC-LTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 88.5 bits (220), Expect = 7e-21
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 29/140 (20%)

Query: 116 FTTLIGQGAFGPVYKAQ------MSTGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHR 168
           +   IG+GAFG V++A+            VAVK+L  + S   + +FQ E  L+    + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------------------YDENYGP 206
           N+V L+G CA      L++ +M+ G L   L                            P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 207 LTWNLRVHIALDVARGLEYL 226
           L+   ++ IA  VA G+ YL
Sbjct: 171 LSCAEQLCIARQVAAGMAYL 190

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 87.7 bits (218), Expect = 7e-21
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLV 174
           IG+G FG VY  +           A+K L+  ++  +   F  E +L+  L+H N++ L+
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88

Query: 175 GYC-AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G     +G   ++  +M  G L   +      P   +L +   L VARG+EYL
Sbjct: 89  GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYL 140

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLV 174
           IG G  G V   ++         VA+K L     + ++ +F +E  ++G+  H N++ L 
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G        M+V  +M  GSL + L   + G  T    V +   V  G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYL 167

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           +G G FG V+ A  +    VAVK +   S    + F  E  ++  L H  LV L     +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVTK 254

Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +    ++  FM+KGSL   L  +          +  +  +A G+ ++
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 85.8 bits (213), Expect = 3e-20
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)

Query: 93  SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG 151
            +  S     +Y Y +          ++G+G +G VY    +S    +A+K +     + 
Sbjct: 8   GDCESDLLEYDYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY 62

Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLT 208
            +    E+ L   L H+N+V  +G  +E G    + +FM     GSL++ L    +GPL 
Sbjct: 63  SQPLHEEIALHKHLKHKNIVQYLGSFSENGF---IKIFMEQVPGGSLSA-LLRSKWGPLK 118

Query: 209 WNLRV--HIALDVARGLEYLHD 228
            N +        +  GL+YLHD
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHD 140

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLV 174
           +G G FG V   ++        +VA+K L     + ++ +F  E  ++G+  H N++ L 
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G   +    M+V  +M  GSL S L  ++    T    V +   +A G++YL
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL 163

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)

Query: 120 IGQGAFGPVYKAQMSTGE---TVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G G FG V K      +   TVAVK+L    +    + E   E  ++ +L +  +V ++
Sbjct: 25  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G C E    MLV      G L  +L  +    +     + +   V+ G++YL
Sbjct: 85  GIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 133

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 120 IGQGAFGPVYKAQMSTGE-----TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G GAFG VYK             VA+K L    S +  KE   E  ++  + + ++  L
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +G C       L+   M  G L  ++  E+   +     ++  + +A+G+ YL D
Sbjct: 83  LGIC-LTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYLED 135

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 85.0 bits (211), Expect = 5e-20
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 120 IGQGAFGPVYKAQ--MSTGET-VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVG 175
           +G G FG V +    M   +  VA+KVL   +++ +  E   E  ++ +L +  +V L+G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            C  +   MLV      G L   L       +  +    +   V+ G++YL
Sbjct: 78  VCQAE-ALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYL 126

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 87.2 bits (216), Expect = 6e-20
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 20/230 (8%)

Query: 3   GESSGLIIGISIGVVIGVLLAIS-ALFCFRYHRKRSQIGNSSSRRAATLPIRANGVDSCS 61
           G    L +         + +A + A     Y R  +    S   R    P +       S
Sbjct: 292 GAPEPLTV-----TAPSLTIAENMADLIDGYCRLVNGATQSFIIR----PQKEGERALPS 342

Query: 62  ILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIG 121
           I   +    +       + +    + E     +  +     +Y   ++Q+        IG
Sbjct: 343 IPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDY---EIQRERIELGRCIG 399

Query: 122 QGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGY 176
           +G FG V++    + E     VA+K     +    + +F  E + + +  H ++V L+G 
Sbjct: 400 EGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV 459

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             E     ++    + G L S L       L     +  A  ++  L YL
Sbjct: 460 ITEN-PVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYL 507

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 85.8 bits (213), Expect = 6e-20
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 120 IGQGAFGPVYKA--QMSTGE---TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           IG G FG VYK   + S+G+    VA+K L A  +++   +F  E  ++G+  H N++ L
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            G  ++    M++  +M  G+L   L  E  G  +    V +   +A G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGMKYL 163

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 85.0 bits (211), Expect = 1e-19
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 23/130 (17%)

Query: 120 IGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A        +T  TVAVK+L   +   E     +E+ +L  + HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94

Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL--------------YDENYGPLTWNLRVHIA 216
           NL+G C + G  ++V V F   G+L+++L               D     LT    +  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154

Query: 217 LDVARGLEYL 226
             VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 120 IGQGAFGPVYKAQMSTGE-----TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           +G G FG V+K             V +KV+     +Q  +     ++ +G L H ++V L
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           +G C       LV  ++  GSL  H+  ++ G L   L ++  + +A+G+ YL
Sbjct: 81  LGLCPGS-SLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYL 131

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 85.8 bits (212), Expect = 2e-19
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)

Query: 120 IGQGAFGPVYKAQ--MSTGET-VAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           +G G FG V +    M   +  VA+KVL     K   +E   E  ++ +L +  +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
            C  +   MLV      G L   L       +  +    +   V+ G++YL
Sbjct: 404 VCQAE-ALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 452

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 83.5 bits (207), Expect = 2e-19
 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 9/114 (7%)

Query: 120 IGQGAFGPVYKA--QMSTGET--VAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
           +G G+FG V +      +G+T  VAVK L        +   +F  EV  +  L HRNL+ 
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           L G         +V      GSL   L  ++ G          A+ VA G+ YL
Sbjct: 86  LYGVVLTP-PMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 137

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 41/226 (18%)

Query: 31  RYHRKRSQIGNSSSRRAATLPI-RANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEG 89
            +H   SQ   +  +    +P+ R   V + S  S ++  P   + +  +    +  L G
Sbjct: 5   HHHHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAG 64

Query: 90  FKRSNVVSASGIP-----EYSYKDLQKATCNFTTLIGQGAFGPVYKA--------QMSTG 136
                 VS   +P     E+    L          +G+G FG V  A        +    
Sbjct: 65  ------VSEYELPEDPKWEFPRDKLT-----LGKPLGEGCFGQVVMAEAVGIDKDKPKEA 113

Query: 137 ETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
            TVAVK+L  D+ + +  +  +E+ ++  +  H+N++NL+G C + G   ++  + SKG+
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 173

Query: 195 LASHL--------------YDENYGPLTWNLRVHIALDVARGLEYL 226
           L  +L                     +T+   V     +ARG+EYL
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 219

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 24/131 (18%)

Query: 120 IGQGAFGPVYKA--------QMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRN 169
           +G+GAFG V  A        +     TVAVK+L  D+ + +  +  +E+ ++  +  H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHL--------------YDENYGPLTWNLRVHI 215
           ++NL+G C + G   ++  + SKG+L  +L                     +T+   V  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162

Query: 216 ALDVARGLEYL 226
              +ARG+EYL
Sbjct: 163 TYQLARGMEYL 173

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 82.7 bits (205), Expect = 4e-19
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLV 174
           IG+G FG V++    + E     VA+K     +    + +F  E + + +  H ++V L+
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G   E     ++    + G L S L       L     +  A  ++  L YL
Sbjct: 83  GVITEN-PVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYL 132

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 82.6 bits (205), Expect = 4e-19
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 120 IGQGAFGPVYKAQMSTGE----TVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           +G+G FG VY+   +  +     VAVK      +   +++F +E +++  L H ++V L+
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
           G   E+    ++      G L  +L   N   L     V  +L + + + YL
Sbjct: 80  GII-EEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYL 129

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 82.8 bits (205), Expect = 6e-19
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 16/130 (12%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           P   ++ + +        +G GAFG VYKA+   TG   A KV+ T S++  +++  E+ 
Sbjct: 17  PNEVWEIVGE--------LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 68

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL--- 217
           +L    H  +V L+G     G+  ++  F   G++ + +  E    LT      I +   
Sbjct: 69  ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLT---EPQIQVVCR 124

Query: 218 DVARGLEYLH 227
            +   L +LH
Sbjct: 125 QMLEALNFLH 134

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 82.7 bits (205), Expect = 7e-19
 Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 29/136 (21%)

Query: 120 IGQGAFGPVYKAQMSTGE------TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +G+G FG V KA     +      TVAVK+L  ++   E  +  +E  +L +++H +++ 
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL----------------------YDENYGPLTWN 210
           L G C++ G  +L+  +   GSL   L                         +   LT  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150

Query: 211 LRVHIALDVARGLEYL 226
             +  A  +++G++YL
Sbjct: 151 DLISFAWQISQGMQYL 166

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 24/131 (18%)

Query: 120 IGQGAFGPVYKA--------QMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRN 169
           +G+GAFG V  A        + +    VAVK+L +D+ + +  +  +E+ ++  +  H+N
Sbjct: 77  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHL--------------YDENYGPLTWNLRVHI 215
           ++NL+G C + G   ++  + SKG+L  +L                     L+    V  
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196

Query: 216 ALDVARGLEYL 226
           A  VARG+EYL
Sbjct: 197 AYQVARGMEYL 207

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)

Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNLV 171
           +G GAFG V +A             VAVK+L + +   EK    +E+ ++  L  H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHL------------YDENYGPLTWNLRVHIALDV 219
           NL+G C   G  +++  +   G L + L            +       +    +H +  V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173

Query: 220 ARGLEYL 226
           A+G+ +L
Sbjct: 174 AQGMAFL 180

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 81.7 bits (202), Expect = 2e-18
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 14/114 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G+G+FG V++ +   TG   AVK +  +  +       E++    L    +V L G  
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG-A 118

Query: 178 AEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             +G    V +FM     GSL   +  +  G L  +  ++       GLEYLH 
Sbjct: 119 VREGPW--VNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHT 168

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 79.6 bits (197), Expect = 7e-18
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 24/131 (18%)

Query: 120 IGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNLV 171
           +G GAFG V +A            TVAVK+L   +   E+    +E+ +L  L +H N+V
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHL----------------YDENYGPLTWNLRVHI 215
           NL+G C   G  +++  +   G L + L                 +++   L     +  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 216 ALDVARGLEYL 226
           +  VA+G+ +L
Sbjct: 151 SYQVAKGMAFL 161

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 79.7 bits (197), Expect = 9e-18
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 40/179 (22%)

Query: 88  EGFKRSNVVSASGIPEYSYKDLQKATCN-----------FTTLIGQGAFGPVYKAQ---- 132
           E   +   V+ S   EY Y D ++   +           F  ++G GAFG V  A     
Sbjct: 10  ESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGI 69

Query: 133 --MSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYV 188
                   VAVK+L   +   E+    +E+ ++ +L  H N+VNL+G C   G   L++ 
Sbjct: 70  SKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129

Query: 189 FMSKGSLASHL---------------------YDENYGPLTWNLRVHIALDVARGLEYL 226
           +   G L ++L                      +E+   LT+   +  A  VA+G+E+L
Sbjct: 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL 188

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 77.0 bits (190), Expect = 6e-17
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 18/130 (13%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVM 160
           P+  Y   +K        IGQGA G VY A  ++TG+ VA++ +    +  ++    E++
Sbjct: 18  PKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL--- 217
           ++    + N+VN +       +  +V  +++ GSL   +  E    +       IA    
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTE--TCMD---EGQIAAVCR 123

Query: 218 DVARGLEYLH 227
           +  + LE+LH
Sbjct: 124 ECLQALEFLH 133

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 21/143 (14%)

Query: 91  KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
               + +    PE  +  L+K        IG+G+FG V+K     T + VA+K++  +  
Sbjct: 9   GLPGMQNLKADPEELFTKLEK--------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA 60

Query: 150 QGEKE-FQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPL 207
           + E E  Q E+ +L +     +    G    K   + ++  ++  GS    L +   GPL
Sbjct: 61  EDEIEDIQQEITVLSQCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSA-LDLLEP--GPL 116

Query: 208 TWNLRVHIAL---DVARGLEYLH 227
                  IA    ++ +GL+YLH
Sbjct: 117 D---ETQIATILREILKGLDYLH 136

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 76.2 bits (188), Expect = 1e-16
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 18/130 (13%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           PE  +  L+K        +G+G++G VYKA    TG+ VA+K +    +   +E   E+ 
Sbjct: 27  PEEVFDVLEK--------LGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEIS 76

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL--- 217
           ++ +    ++V   G   +     +V  +   GS++  +       LT      IA    
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLT---EDEIATILQ 132

Query: 218 DVARGLEYLH 227
              +GLEYLH
Sbjct: 133 STLKGLEYLH 142

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 12/128 (9%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           P        K        IG+G+ G V  A+   +G  VAVK++    +Q  +    EV+
Sbjct: 43  PRLLLDSYVK--------IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV 94

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++    H N+V +        +  ++  F+  G+L   +  +    L       +   V 
Sbjct: 95  IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQ--VRLNEEQIATVCEAVL 151

Query: 221 RGLEYLHD 228
           + L YLH 
Sbjct: 152 QALAYLHA 159

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 75.5 bits (186), Expect = 3e-16
 Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 20/133 (15%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQT 157
           PE  + DL++        IG G+FG VY A+ +   E VA+K ++   KQ     ++   
Sbjct: 52  PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 103

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           EV  L +L H N +   G    +    LV  +   GS +  L + +  PL     V IA 
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASD-LLEVHKKPLQ---EVEIAA 158

Query: 218 ---DVARGLEYLH 227
                 +GL YLH
Sbjct: 159 VTHGALQGLAYLH 171

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 11/116 (9%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRL--HHRNLVNLV 174
            IG G    V++      +  A+K   L     Q    ++ E+  L +L  H   ++ L 
Sbjct: 16  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75

Query: 175 GYCAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            Y         +Y+ M      L S L  +    +    R     ++   +  +H 
Sbjct: 76  DYEITDQY---IYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQ 126

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 74.3 bits (183), Expect = 7e-16
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G+G F  V   + +  G   A+K +    +Q  +E Q E  +    +H N++ LV YC
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95

Query: 178 A-EKGQHMLVYVFM---SKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHD 228
             E+G     ++ +    +G+L + +    +    LT +  + + L + RGLE +H 
Sbjct: 96  LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 74.5 bits (183), Expect = 8e-16
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 11/116 (9%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNL--VNLV 174
            IG G    V++      +  A+K   L     Q    ++ E+  L +L   +   + L 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122

Query: 175 GYCAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            Y         +Y+ M      L S L  +    +    R     ++   +  +H 
Sbjct: 123 DYEITDQY---IYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQ 173

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 73.9 bits (182), Expect = 8e-16
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 11/116 (9%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNL--VNLV 174
            IG G    V++      +  A+K   L     Q    ++ E+  L +L   +   + L 
Sbjct: 35  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94

Query: 175 GYCAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            Y         +Y+ M      L S L  +    +    R     ++   +  +H 
Sbjct: 95  DYEITDQY---IYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQ 145

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 12/119 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRL-HHRNLVNLV 174
            IG G FG V+K      G   A+K           E+    EV     L  H ++V   
Sbjct: 18  KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77

Query: 175 GYCAEKGQHMLVYVFM---SKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHD 228
              AE      + +     + GSLA  +                 + L V RGL Y+H 
Sbjct: 78  SAWAEDDH---MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 18/136 (13%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE-FQTE 158
           I    Y+  +         IG GA   V  A      E VA+K +  +  Q   +    E
Sbjct: 12  INRDDYELQEV--------IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE 63

Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV----H 214
           +  + + HH N+V+       K +  LV   +S GS+   +             V     
Sbjct: 64  IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV-LDIIKHIVAKGEHKSGVLDEST 122

Query: 215 IAL---DVARGLEYLH 227
           IA    +V  GLEYLH
Sbjct: 123 IATILREVLEGLEYLH 138

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 71.9 bits (176), Expect = 5e-15
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 119 LIGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL---HHRN 169
           L+G+GAF  VY+A           +   +KV          EF     L+ RL       
Sbjct: 72  LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ---KPANPWEFYIGTQLMERLKPSMQHM 128

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHL---YDENYGPLTWNLRVHIALDVARGLEYL 226
            +        +   +LV    S G+L + +    +     +   L +  A+ +   +E +
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188

Query: 227 HDGVSCH 233
           HD    H
Sbjct: 189 HDCEIIH 195

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 23/137 (16%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           P   ++ ++         +G G +G VYK + + TG+  A+KV+       E+E + E+ 
Sbjct: 22  PAGIFELVEL--------VGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEIN 72

Query: 161 LLGRL-HHRNLVNLVG------YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
           +L +  HHRN+    G            Q  LV  F   GS+   + +     L      
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK---EE 129

Query: 214 HIAL---DVARGLEYLH 227
            IA    ++ RGL +LH
Sbjct: 130 WIAYICREILRGLSHLH 146

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 70.7 bits (173), Expect = 2e-14
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 13/142 (9%)

Query: 92  RSNVVSASGIPEYSYKDLQKATCNFTTLIGQGA--FGPVYKAQ-MSTGETVAVKV--LAT 146
               +S+       Y+ L          IG+G      V  A+   TGE V V+   L  
Sbjct: 13  YFQGMSSFLPEGGCYELLTV--------IGKGFEDLMTVNLARYKPTGEYVTVRRINLEA 64

Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP 206
            S +     Q E+ +    +H N+V          +  +V  FM+ GS    +       
Sbjct: 65  CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG 124

Query: 207 LTWNLRVHIALDVARGLEYLHD 228
           +      +I   V + L+Y+H 
Sbjct: 125 MNELAIAYILQGVLKALDYIHH 146

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 13/138 (9%)

Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE 154
           + +     + +          + ++GQGA   V++ +   TG+  A+KV    S     +
Sbjct: 1   MGSQSTSNHLWL--------LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD 52

Query: 155 -FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV--FMSKGSLASHLYD-ENYGPLTWN 210
               E  +L +L+H+N+V L     E      V +  F   GSL + L +  N   L  +
Sbjct: 53  VQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112

Query: 211 LRVHIALDVARGLEYLHD 228
             + +  DV  G+ +L +
Sbjct: 113 EFLIVLRDVVGGMNHLRE 130

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 69.4 bits (170), Expect = 3e-14
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 15/139 (10%)

Query: 96  VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE 154
           + +     + +          + ++GQGA   V++ +   TG+  A+KV    S     +
Sbjct: 1   MGSQSTSNHLWL--------LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD 52

Query: 155 -FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYD-ENYGPLTW 209
               E  +L +L+H+N+V L     E+       + M     GSL + L +  N   L  
Sbjct: 53  VQMREFEVLKKLNHKNIVKLFA-IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE 111

Query: 210 NLRVHIALDVARGLEYLHD 228
           +  + +  DV  G+ +L +
Sbjct: 112 SEFLIVLRDVVGGMNHLRE 130

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 10/120 (8%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           ++ +G F  VY+AQ + +G   A+K L ++ ++  +    EV  + +L  H N+V     
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 177 CAEKGQHM-----LVYVFM--SKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHD 228
            +   +          +     KG L   L   E+ GPL+ +  + I     R ++++H 
Sbjct: 95  ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
            IG+G+FG     +    G    +K   ++  S +  +E + EV +L  + H N+V    
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90

Query: 176 YCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              E G    +Y+ M     G L   +  +       +  +   + +   L+++HD
Sbjct: 91  SFEENGS---LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 69.1 bits (169), Expect = 8e-14
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG V++  + +TG   A K + T  +  ++  + E+  +  L H  LVNL     
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHL 234
           +  + +++Y FMS G L   + DE+   ++ +  V     V +GL ++H+     HL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNY-VHL 279

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 68.6 bits (168), Expect = 9e-14
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G GAFG V++  + +TG     K + T     +   + E+ ++ +LHH  L+NL     
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHL 234
           +K + +L+  F+S G L   +  E+Y  ++    ++       GL+++H+  +  HL
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSI-VHL 173

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 33/184 (17%), Positives = 53/184 (28%), Gaps = 22/184 (11%)

Query: 51  PIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQ 110
               +                  V S R    +++   G+  S   S     + S++ L 
Sbjct: 8   SSGVDLGTENLYFQSMHQLQPRRV-SFRGEASETLQSPGYDPSRPESFF---QQSFQRLS 63

Query: 111 KATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKV--LATDSKQGEKEFQTEVMLLGRL-H 166
           +        +G G++G V+K +    G   AVK         +       EV    ++  
Sbjct: 64  R--------LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115

Query: 167 HRNLVNLVGYCAEKGQHMLVYVFM--SKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
           H   V L     E G    +Y+       SL  H        L          D    L 
Sbjct: 116 HPCCVRLEQAWEEGGI---LYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALA 171

Query: 225 YLHD 228
           +LH 
Sbjct: 172 HLHS 175

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 65.9 bits (161), Expect = 8e-13
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G G FG V+K  + +TG  +A K++ T   + ++E + E+ ++ +L H NL+ L     
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHL 234
            K   +LV  ++  G L   + DE+Y  LT    +     +  G+ ++H   +  HL
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQICEGIRHMHQMYI-LHL 211

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 65.3 bits (160), Expect = 9e-13
 Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNLV 174
           +G+G +G VYKA+ S G  VA+K +  D+   E E        E+ LL  LHH N+V+L+
Sbjct: 29  VGEGTYGVVYKAKDSQGRIVALKRIRLDA---EDEGIPSTAIREISLLKELHHPNIVSLI 85

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                +    LV+ FM K  L   L DEN   L  +        + RG+ + H 
Sbjct: 86  DVIHSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQ 137

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 21/127 (16%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           LIG G FG V+KA+    G+T  +K +       EK  + EV  L +L H N+V+  G  
Sbjct: 18  LIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAER-EVKALAKLDHVNIVHYNGCW 73

Query: 178 AEKGQHML-------------VYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
                                +++ M    KG+L   +       L   L + +   + +
Sbjct: 74  DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133

Query: 222 GLEYLHD 228
           G++Y+H 
Sbjct: 134 GVDYIHS 140

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQTEVMLLGRLHHRNLVNLV 174
            IG+G F  VY+A  +  G  VA+K +        K       E+ LL +L+H N++   
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98

Query: 175 GYCAEKGQHMLVYVFM---SKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHD 228
               E  +   + + +     G L+  +  + +    +         + +   LE++H 
Sbjct: 99  ASFIEDNE---LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 10/115 (8%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNL 173
           IG+G +G VYKA+   TGE VA+K +  D+   E E        E+ LL  L+H N+V L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDT---ETEGVPSTAIREISLLKELNHPNIVKL 67

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +     + +  LV+ F+ +  L   +       +   L       + +GL + H 
Sbjct: 68  LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 10/113 (8%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC 177
           ++G GA G +    M     VAVK +     +       EV LL     H N++    +C
Sbjct: 31  VLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRY--FC 85

Query: 178 AEKGQHMLVYVFMS--KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            EK +    Y+ +     +L     ++          + +      GL +LH 
Sbjct: 86  TEKDRQF-QYIAIELCAATLQ-EYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 64.5 bits (158), Expect = 2e-12
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 11/117 (9%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEF-QT---EVMLLGRLHHRNLVNLV 174
           +G G +  VYK    +TG  VA+K +  DS++G      T   E+ L+  L H N+V L 
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKELKHENIVRLY 69

Query: 175 GYCAEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                + +  LV+ FM    K  + S         L  NL  +    + +GL + H+
Sbjct: 70  DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 10/114 (8%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNLV 174
           IG+G +G VYKAQ + GET A+K +  +    E E     T  E+ +L  L H N+V L 
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLEK---EDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                K + +LV+  + +  L   L D   G L         L +  G+ Y HD
Sbjct: 67  DVIHTKKRLVLVFEHLDQ-DLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHD 118

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 65.1 bits (158), Expect = 2e-12
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLV--- 174
           +G G FG V +     TGE VA+K    +     +E +  E+ ++ +L+H N+V+     
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81

Query: 175 ---GYCAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGV 230
                 A     +L   +   G L  +L   EN   L       +  D++  L YLH+  
Sbjct: 82  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141

Query: 231 SCH 233
             H
Sbjct: 142 IIH 144

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 63.9 bits (156), Expect = 2e-12
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLV----- 171
            +G+G FG V++A+        A+K +   +++  +E    EV  L +L H  +V     
Sbjct: 12  CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71

Query: 172 ----NLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLT-WNLRVHIALDVARGL 223
               N           + +Y+ M    K +L   +           ++ +HI L +A  +
Sbjct: 72  WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131

Query: 224 EYLHD 228
           E+LH 
Sbjct: 132 EFLHS 136

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 64.0 bits (156), Expect = 4e-12
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC 177
           ++G G+ G V       G  VAVK +             E+ LL     H N++    YC
Sbjct: 22  ILGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESDDHPNVIRY--YC 76

Query: 178 AEKGQHMLVYVFMS--KGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +E     L Y+ +     +L     + ++ DEN         + +   +A G+ +LH 
Sbjct: 77  SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 63.1 bits (154), Expect = 5e-12
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 16/124 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           ++GQGAFG V KA+        A+K +    ++      +EVMLL  L+H+ +V      
Sbjct: 13  VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVRYYAAW 71

Query: 178 AEKGQHML----------VYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
            E+   +           +++ M     G+L   ++ EN      +    +   +   L 
Sbjct: 72  LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALS 130

Query: 225 YLHD 228
           Y+H 
Sbjct: 131 YIHS 134

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 63.0 bits (154), Expect = 6e-12
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 13/116 (11%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           ++G GAF  V+   Q  TG+  A+K +       +   + E+ +L ++ H N+V L    
Sbjct: 16  VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75

Query: 178 AEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                + LV   +S G L        +Y E            +   V   ++YLH+
Sbjct: 76  ESTTHYYLVMQLVSGGELFDRILERGVYTEKDA-------SLVIQQVLSAVKYLHE 124

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 12/115 (10%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNL 173
           +G+G +G VYKA    T ETVA+K +  +    E+E        EV LL  L HRN++ L
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEH---EEEGVPGTAIREVSLLKELQHRNIIEL 98

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                   +  L++ +     L  ++  +    ++  +       +  G+ + H 
Sbjct: 99  KSVIHHNHRLHLIFEYAEN-DLKKYM--DKNPDVSMRVIKSFLYQLINGVNFCHS 150

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 62.6 bits (153), Expect = 9e-12
 Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           +G+G FG V++  + S+ +T   K +       +   + E+ +L    HRN+++L     
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESFE 71

Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHL 234
              + ++++ F+S   +   +    +  L     V     V   L++LH   +  H 
Sbjct: 72  SMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNI-GHF 126

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNL 173
           +G+G F  VYKA+  +T + VA+K +    +   K+        E+ LL  L H N++ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +     K    LV+ FM    L   +  +N   LT +      L   +GLEYLH 
Sbjct: 78  LDAFGHKSNISLVFDFMET-DLEVII-KDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 11/115 (9%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLHHRNLVNL 173
           IG+G +G V+KA+   T E VA+K +  D    + E        E+ LL  L H+N+V L
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDD---DDEGVPSSALREICLLKELKHKNIVRL 66

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                   +  LV+ F  +  L  +  D   G L   +       + +GL + H 
Sbjct: 67  HDVLHSDKKLTLVFEFCDQ-DLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHS 119

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 6/120 (5%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVG 175
           +G+G F  V +    STG+  A K L      +    E   E+ +L        ++NL  
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHL 234
                 + +L+  + + G + S    E    ++ N  + +   +  G+ YLH   +  HL
Sbjct: 97  VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI-VHL 155

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
            IG G++G   K +  S G+ +  K L     ++  ++   +EV LL  L H N+V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 176 YCAEKGQHMLVYVFM---SKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLHD 228
              ++    L Y+ M     G LAS +    +    L     + +   +   L+  H 
Sbjct: 73  RIIDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G+G F   ++     T E  A K++         Q EK    E+ +   L H+++V  
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106

Query: 174 VGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G+  +      V+V +    + SL      +    LT     +    +  G +YLH
Sbjct: 107 HGFFEDNDF---VFVVLELCRRRSLLELH--KRRKALTEPEARYYLRQIVLGCQYLH 158

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           ++G+GA   V     + T +  AVK++             EV +L +   HRN++ L+ +
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79

Query: 177 CAEKGQHMLVYVFMSKGSLASHL-----YDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
             E+ +  LV+  M  GS+ SH+     ++E            +  DVA  L++LH+ G+
Sbjct: 80  FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA-------SVVVQDVASALDFLHNKGI 132

Query: 231 SCH 233
             H
Sbjct: 133 -AH 134

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G+G FG VY A+   +   +A+KVL       +   E + + EV +   L H N++ L
Sbjct: 16  PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRL 74

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            GY  +  +  L+  +   G++   L  +               ++A  L Y H
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 126

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 9/114 (7%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLV 174
           +G+G++G V K +   TG  VA+K  L +D  +  K+      E+ LL +L H NLVNL+
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK--IAMREIKLLKQLRHENLVNLL 90

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             C +K +  LV+ F+   ++   L +     L + +       +  G+ + H 
Sbjct: 91  EVCKKKKRWYLVFEFVDH-TILDDL-ELFPNGLDYQVVQKYLFQIINGIGFCHS 142

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 9/89 (10%)

Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
           +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L  + HH N+V
Sbjct: 30  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89

Query: 172 NLVGYC-AEKGQHMLVYVFMSKGSLASHL 199
           NL+G C    G  M++  F   G+L+++L
Sbjct: 90  NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G+G F   ++     T E  A K++         Q EK    E+ +   L H+++V  
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80

Query: 174 VGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            G+  +      V+V +    + SL      +    LT     +    +  G +YLH
Sbjct: 81  HGFFEDNDF---VFVVLELCRRRSLLELH--KRRKALTEPEARYYLRQIVLGCQYLH 132

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 60.6 bits (147), Expect = 6e-11
 Identities = 45/199 (22%), Positives = 68/199 (34%), Gaps = 26/199 (13%)

Query: 52  IRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKD--- 108
           +   G D    +    V   +               +   R      S  P   Y D   
Sbjct: 110 LSHTGPDLIPEVPRQLV---TNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIY 166

Query: 109 -----------LQKATCN---FTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQ 150
                       Q  T N      ++G+G FG V   Q+ +TG+  A K L       ++
Sbjct: 167 FNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK 226

Query: 151 GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTW 209
           GE     E  +L +++ R +V+L  Y  E    + LV   M+ G L  H+Y         
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE 285

Query: 210 NLRVHIALDVARGLEYLHD 228
              V  A ++  GLE LH 
Sbjct: 286 ARAVFYAAEICCGLEDLHR 304

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 59.9 bits (146), Expect = 6e-11
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEF-QT---EVMLLGRLHHRNLVNLV 174
           +G+G +  VYK     T   VA+K +  + ++G      T   EV LL  L H N+V L 
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG---APCTAIREVSLLKDLKHANIVTLH 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                +    LV+ ++ K  L  +L D+    +  +        + RGL Y H 
Sbjct: 67  DIIHTEKSLTLVFEYLDK-DLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHR 118

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 19/123 (15%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-F-QT---EVMLLGRLHHRNLVNL 173
           IGQG FG V+KA+   TG+ VA+K +  ++   EKE F  T   E+ +L  L H N+VNL
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVNL 81

Query: 174 VGYCAEKGQHM--------LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
           +  C  K            LV+ F     LA  L        T +    +   +  GL Y
Sbjct: 82  IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYY 139

Query: 226 LHD 228
           +H 
Sbjct: 140 IHR 142

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 59.9 bits (146), Expect = 8e-11
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLV 174
           IG+G++G V+K +   TG+ VA+K  L ++     K  +    E+ +L +L H NLVNL+
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK--KIALREIRMLKQLKHPNLVNLL 68

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                K +  LV+ +    ++   L D     +  +L   I     + + + H 
Sbjct: 69  EVFRRKRRLHLVFEYCDH-TVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFCHK 120

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.6 bits (145), Expect = 9e-11
 Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 30/168 (17%)

Query: 69  GPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPV 128
           GP     +G    G+         +          Y  K+           +G+GAF  V
Sbjct: 1   GPHMASMTGGQQMGRGSEFMMNASTKFSD-----NYDVKEE----------LGKGAFSVV 45

Query: 129 YKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML 185
            +    +TG   A K++ T   S +  ++ + E  +  +L H N+V L     E+  H L
Sbjct: 46  RRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105

Query: 186 VYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           V+  ++ G L     A   Y E           H    +   + Y H 
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILESIAYCHS 146

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 18/124 (14%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
           +G+G+FG V   +   TG+  AVKV++      K  ++    EV LL +L H N++ L  
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93

Query: 176 YCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-G 229
           +  +KG   LV    + G L     +   + E            I   V  G+ Y+H   
Sbjct: 94  FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-------ARIIRQVLSGITYMHKNK 146

Query: 230 VSCH 233
           +  H
Sbjct: 147 I-VH 149

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLV 174
           L+G+G  G VY+A+       VA+K+++             Q E    GRL   ++V + 
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100

Query: 175 GYCAEKGQHMLV--YVFMSKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +    GQ  +    +    G  LA+ L  +  GPL     V I   +   L+  H 
Sbjct: 101 DFGEIDGQLYVDMRLI---NGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHA 152

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 17/123 (13%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G GA+G V   +   T    A+K++     S     +   EV +L  L H N++ L  +
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104

Query: 177 CAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
             +K  + LV      G L         ++E            I   V  G+ YLH   +
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA-------AVIIKQVLSGVTYLHKHNI 157

Query: 231 SCH 233
             H
Sbjct: 158 -VH 159

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 12/118 (10%)

Query: 119 LIGQGAFGPVYKA--QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL-- 173
            I  G  G +Y A  +   G  V +K L        +     E   L  + H ++V +  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 174 VGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                ++    + Y+ M      SL           L     +   L++   L YLH 
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHS 200

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT------DSKQGEKEFQTEVMLLGRLHHRNLVN 172
           +G G F  V K  + STG   A K +              +E + EV +L ++ H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVS 231
           L      +   +L+   +S G L   L  +    L+          +  G+ YLH   + 
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKI- 136

Query: 232 CHL 234
            H 
Sbjct: 137 AHF 139

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQG-EKEFQTEVMLLGRLHHRNLVNLV 174
            +G+G FG VY A+       +A+KVL      K+G E + + E+ +   L H N++ + 
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            Y  ++ +  L+  F  +G L   L  + +G            ++A  L Y H
Sbjct: 81  NYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCH 131

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 37/190 (19%)

Query: 64  SDSTVGPESPVK--SGRNGNGKSMWLEGFKRSNVVSASG-----IPEYSYKDLQKATCNF 116
           + S      PV+  S       S   +G K + VV+  G       E SY D +      
Sbjct: 7   TTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----- 61

Query: 117 TTLIGQGAFGPVYKAQMS-TGETVAVK-VLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
              IG G+FG VY+A++  +GE VA+K VL     Q ++    E+ ++ +L H N+V L 
Sbjct: 62  ---IGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHCNIVRLR 113

Query: 175 GYCAEKGQHM------LVYVFMSKGSLASHL--YDENYGPLTWNLRVHIAL---DVARGL 223
            +    G+        LV  ++ + ++      Y      L     +++ L    + R L
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLP---VIYVKLYMYQLFRSL 169

Query: 224 EYLHDGVSCH 233
            Y+H    CH
Sbjct: 170 AYIHSFGICH 179

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 15/117 (12%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G+GAF  V +    +TG   A K++ T   S +  ++ + E  +  +L H N+V L   
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73

Query: 177 CAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             E+  H LV+  ++ G L     A   Y E           H    +   + Y H 
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADA-------SHCIQQILESIAYCHS 123

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKV-----LATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           IGQG++G V  A +  T    A+K+     +   + +  +  +TEV L+ +LHH N+  L
Sbjct: 34  IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93

Query: 174 VGYCAEKGQHMLVYVFMSKGSL 195
                ++    LV      G L
Sbjct: 94  YEVYEDEQYICLVMELCHGGHL 115

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 12/117 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLV 174
            +G G    VY A+       VA+K +    ++ E   K F+ EV    +L H+N+V+++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77

Query: 175 GYCAEKGQHMLV--YVFMSKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
               E   + LV  Y+   +G +L+ ++  E++GPL+ +  ++    +  G+++ HD
Sbjct: 78  DVDEEDDCYYLVMEYI---EGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD 129

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGYC 177
           +G G  G V+K     +G  +A K++  + K     +   E+ +L   +   +V   G  
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              G+  +    M  GSL   +  +  G +   +   +++ V +GL YL +
Sbjct: 101 YSDGEISICMEHMDGGSLDQ-VLKKA-GRIPEQILGKVSIAVIKGLTYLRE 149

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G+GAF  V +  ++  G+  A  ++ T   S +  ++ + E  +   L H N+V L   
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78

Query: 177 CAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
            +E+G H L++  ++ G L     A   Y E           H    +   + + H  GV
Sbjct: 79  ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA-------SHCIQQILEAVLHCHQMGV 131

Query: 231 SCH 233
             H
Sbjct: 132 -VH 133

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 13/123 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQG-EKEFQTEVMLLGRLHHRNLVNLV 174
           L+G+G+F  VY+A+ + TG  VA+K++   +  K G  +  Q EV +  +L H +++ L 
Sbjct: 18  LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77

Query: 175 GYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
            Y  +      VY+ +     G +  +L      P + N   H    +  G+ YLH  G+
Sbjct: 78  NYFEDSNY---VYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSHGI 133

Query: 231 SCH 233
             H
Sbjct: 134 -LH 135

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 28/133 (21%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVL-----------------ATDSKQGEKEFQTEVMLL 162
           + QG F  +   +    +  A+K                       K    +F+ E+ ++
Sbjct: 39  LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR- 221
             + +   +   G      +  ++Y +M   S+      E +  L  N    I + V + 
Sbjct: 98  TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD--EYFFVLDKNYTCFIPIQVIKC 155

Query: 222 -------GLEYLH 227
                     Y+H
Sbjct: 156 IIKSVLNSFSYIH 168

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 22/124 (17%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKV-----LATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           IG+G F  V +     TG+  AVK+       +      ++ + E  +   L H ++V L
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91

Query: 174 VGYCAEKGQHMLVYVFMSKGSL---------ASHLYDENYGPLTWNLRVHIALDVARGLE 224
           +   +  G   +V+ FM    L         A  +Y E           H    +   L 
Sbjct: 92  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA-------SHYMRQILEALR 144

Query: 225 YLHD 228
           Y HD
Sbjct: 145 YCHD 148

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE--FQTEVMLLGRLHHRNLVNLVGY 176
           +G+G+FG V K     T +  AVKV+   S + +       EV LL +L H N++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89

Query: 177 CAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
             +     +V    + G L         + E+           I   V  G+ Y+H   +
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-------ARIIKQVFSGITYMHKHNI 142

Query: 231 SCH 233
             H
Sbjct: 143 -VH 144

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 57.4 bits (139), Expect = 6e-10
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 17/123 (13%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGE--KEFQTEVMLLGRLHHRNLVNLVGY 176
           +G+G+FG V K +   T +  AVKV+   S + +       EV LL +L H N++ L   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89

Query: 177 CAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GV 230
             +     +V    + G L         + E+           I   V  G+ Y+H   +
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-------ARIIKQVFSGITYMHKHNI 142

Query: 231 SCH 233
             H
Sbjct: 143 -VH 144

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEK------EFQTEVMLLGRLHHRNLVN 172
           +G G F  V K  + STG   A K +     +  +      E + EV +L ++ H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVS 231
           L      +   +L+   +S G L   L  +    L+          +  G+ YLH   + 
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKI- 136

Query: 232 CHL 234
            H 
Sbjct: 137 AHF 139

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.8 bits (138), Expect = 7e-10
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEK------EFQTEVMLLGRLHHRNLVN 172
           +G G F  V K  Q  TG+  A K +        +      E + EV +L  + H N++ 
Sbjct: 13  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVS 231
           L      K   +L+   +S G L   L ++    LT +        +  G+ YLH   + 
Sbjct: 73  LHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRI- 129

Query: 232 CHL 234
            H 
Sbjct: 130 AHF 132

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEV-MLLGRLHHRNLVNLVGY 176
           IG+GA+G V K     +G+ +AVK + +   + E K+   ++ +++       +V   G 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89

Query: 177 CAEKGQHMLVYVFMSKGSLAS---HLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              +G   +    MS  S      ++Y      +   +   I L   + L +L +
Sbjct: 90  LFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 56.2 bits (135), Expect = 1e-09
 Identities = 15/145 (10%), Positives = 27/145 (18%), Gaps = 36/145 (24%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKE---FQTEVMLLGRLHHRNLVNLV 174
            +  G    V+    +   E  A+KV    ++    E            RL   +     
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128

Query: 175 GYC--------------------------AEKGQHMLVYVFMSKGSLAS-----HLYDEN 203
                                             ++L+    S   L             
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVF 187

Query: 204 YGPLTWNLRVHIALDVARGLEYLHD 228
            G         +   + R    L  
Sbjct: 188 RGDEGILALHILTAQLIRLAANLQS 212

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           IG+G++G V  A Q  T    A K +     +    F+ E+ ++  L H N++ L     
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76

Query: 179 EKGQHMLV 186
           +     LV
Sbjct: 77  DNTDIYLV 84

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 15/123 (12%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDS-KQGEKEF-QT---EVMLLGRLH---HRNL 170
           IG GA+G VYKA+   +G  VA+K +   +   G      +   EV LL RL    H N+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 171 VNLV-----GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
           V L+          + +  LV+  + +  L ++L       L       +     RGL++
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135

Query: 226 LHD 228
           LH 
Sbjct: 136 LHA 138

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.4 bits (133), Expect = 3e-09
 Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 37/151 (24%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRL--------- 165
           ++GQ       +A    TGE+  V V     +      K+ + EV+ L  L         
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144

Query: 166 -------------HHRNLVNLVGYCAEKGQHMLVYVF-------MSKGSLASHLYD--EN 203
                               ++    ++    ++  F        +  +    L      
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 204

Query: 204 YGPLTWNLRVHIALDVARGLEYLHD-GVSCH 233
           +  L  + R+ + L V R L  LH  G+  H
Sbjct: 205 HKSLVHHARLQLTLQVIRLLASLHHYGL-VH 234

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEK------EFQTEVMLLGRLHHRNLVN 172
           +G G F  V K  + STG   A K +     +  +      + + EV +L  + H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVS 231
           L      K   +L+   ++ G L   L ++    LT          +  G+ YLH   + 
Sbjct: 79  LHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQI- 135

Query: 232 CHL 234
            H 
Sbjct: 136 AHF 138

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 120 IGQGAFGPVYKAQ---MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           +G+G +G VYKA+       +  A+K +             E+ LL  L H N+++L   
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKV 86

Query: 177 CAEKGQH--MLVYVFMS---KGSLASHLYDENYG---PLTWNLRVHIALDVARGLEYLHD 228
                     L++ +        +  H   +       L   +   +   +  G+ YLH 
Sbjct: 87  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 28/134 (20%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLA-------------TDSKQGEKEFQTEVMLLGRL 165
           +G GA+G V   +  +     A+KV+               + ++  +E   E+ LL  L
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103

Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVA 220
            H N++ L     +K    LV  F   G L       H +DE           +I   + 
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA-------ANIMKQIL 156

Query: 221 RGLEYLHD-GVSCH 233
            G+ YLH   +  H
Sbjct: 157 SGICYLHKHNI-VH 169

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 120 IGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLVGYC 177
           +G GAFG V+  +  S+G    +K +  D  Q   E  + E+ +L  L H N++ +    
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89

Query: 178 AEKGQHMLV 186
            +     +V
Sbjct: 90  EDYHNMYIV 98

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEV-MLLGRLHHRNLVNLVGY 176
           +G+GA+G V K + + +G+ +AVK +       E K    ++ + +  +     V   G 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY---GPLTWNLRVHIALDVARGLEYLHD 228
              +G   +    M   SL    Y +       +  ++   IA+ + + LE+LH 
Sbjct: 75  LFREGDVWICMELMD-TSLDK-FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 22/123 (17%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--------SKQGEKEFQTEVMLLGRLHHRNL 170
           +G GA G V  A +  T + VA+++++                  +TE+ +L +L+H  +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEY 225
           + +  +  +   + +V   M  G L      +    E                +   ++Y
Sbjct: 203 IKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC-------KLYFYQMLLAVQY 254

Query: 226 LHD 228
           LH+
Sbjct: 255 LHE 257

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 54.2 bits (130), Expect = 7e-09
 Identities = 21/151 (13%), Positives = 42/151 (27%), Gaps = 37/151 (24%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE----------------------- 154
           ++GQ       +A    TGE+  V V     +                            
Sbjct: 80  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139

Query: 155 -----FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM----SKGSLASHLYD--EN 203
                F     L+     + ++ +     +       +++     +  +    L      
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199

Query: 204 YGPLTWNLRVHIALDVARGLEYLHD-GVSCH 233
           +  L  + R+ + L V R L  LH  G+  H
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHHYGL-VH 229

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 53.9 bits (130), Expect = 7e-09
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLH-HRNLVNLVGY 176
           +G G  G V+K +   TG  +AVK +     + E K    ++ ++ + H    +V   G 
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                   +    M   +    L     GP+   +   + + + + L YL +
Sbjct: 93  FITNTDVFIAMELMGTCAEK--LKKRMQGPIPERILGKMTVAIVKALYYLKE 142

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 53.8 bits (130), Expect = 8e-09
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC 177
           +G+G+F    K     + +  AVK++   SK+ E   Q E+  L     H N+V L    
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75

Query: 178 AEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            ++    LV   ++ G L         + E           +I   +   + ++HD
Sbjct: 76  HDQLHTFLVMELLNGGELFERIKKKKHFSETEA-------SYIMRKLVSAVSHMHD 124

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 54.0 bits (130), Expect = 8e-09
 Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 27/208 (12%)

Query: 45  RRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIP-- 102
           R      +RA  ++  + L  S +  E+ V   R G G     +   R+ +      P  
Sbjct: 103 RPQKAQALRAAYLEPQAQLFCSFLDAET-VARARAGAGDG-LFQPLLRAVLAHLGQAPFQ 160

Query: 103 ------------EYSYKDLQKATCN-FTTL--IGQGAFGPVYKAQM-STGETVAVKVLAT 146
                       ++ + + Q    + F     +G+G FG V+  QM +TG+  A K L  
Sbjct: 161 EFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220

Query: 147 D---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLY-- 200
                ++G +    E  +L ++H R +V+L  Y  E    + LV   M+ G +  H+Y  
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNV 279

Query: 201 DENYGPLTWNLRVHIALDVARGLEYLHD 228
           DE+         +     +  GLE+LH 
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 34/171 (19%), Positives = 57/171 (33%), Gaps = 30/171 (17%)

Query: 64  SDSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQG 123
             S     +    G        W++G  R  +        +  +            +G+G
Sbjct: 20  FQSMSSVTASAAPGTASLVPDYWIDGSNRDALSD-----FFEVESE----------LGRG 64

Query: 124 AFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ 182
           A   VY+  Q  T +  A+KVL       +K  +TE+ +L RL H N++ L        +
Sbjct: 65  ATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE 122

Query: 183 HMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             LV   ++ G L         Y E                +   + YLH+
Sbjct: 123 ISLVLELVTGGELFDRIVEKGYYSERDA-------ADAVKQILEAVAYLHE 166

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           ++G G    V+ A+ +     VAVKVL    A D     + F+ E      L+H  +V +
Sbjct: 19  ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAV 77

Query: 174 --VGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
              G  AE     L Y+ M      +L   ++ E  GP+T    + +  D  + L + H 
Sbjct: 78  YDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQ 134

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 38/184 (20%)

Query: 65  DSTVGPESPVKSGRNGNGKSMWLEGFKRSNVVSASGIP-EYSYKDLQKATCNFTTLIGQG 123
             +  P + VK     +      +  K       +G   E +Y + +         IG G
Sbjct: 4   TMSNAPLNGVKLNPLDDPN----KVIKVLASDGKTGEQREIAYTNCKV--------IGNG 51

Query: 124 AFGPVYKAQMSTGETVAVK-VLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYCAEKG 181
           +FG V++A++   + VA+K VL       +K F+  E+ ++  + H N+V+L  +    G
Sbjct: 52  SFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105

Query: 182 QHM------LVYVFMSKGSLASHL--YDENYGPLTWNLRVHIAL---DVARGLEYLHD-G 229
                    LV  ++ + ++      Y +    +     + I L    + R L Y+H  G
Sbjct: 106 DKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMP---MLLIKLYMYQLLRSLAYIHSIG 161

Query: 230 VSCH 233
           + CH
Sbjct: 162 I-CH 164

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 13/114 (11%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLV 174
             G       ++A   +    VA+  +       +   +E  +  + L R+    +  ++
Sbjct: 38  FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                +   ++V  ++  GSL            +    +     +A   +  H 
Sbjct: 98  DVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAHR 147

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 22/123 (17%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLAT--------DSKQGEKEFQTEVMLLGRLHHRNL 170
           +G GA G V  A +  T + VA+K+++                  +TE+ +L +L+H  +
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEY 225
           + +  +  +   + +V   M  G L      +    E                +   ++Y
Sbjct: 78  IKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATC-------KLYFYQMLLAVQY 129

Query: 226 LHD 228
           LH+
Sbjct: 130 LHE 132

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 51.4 bits (124), Expect = 5e-08
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 19/124 (15%)

Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKE---FQT--EVMLLGRLH---HRN 169
           IG+GA+G V+KA+   + G  VA+K +   +    +E     T  EV +L  L    H N
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIREVAVLRHLETFEHPN 75

Query: 170 LVNL-----VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
           +V L     V     + +  LV+  + +  L ++L       +       +   + RGL+
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134

Query: 225 YLHD 228
           +LH 
Sbjct: 135 FLHS 138

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 13/70 (18%)

Query: 105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLG 163
            Y   +         +G G+FG V +     +G+  A+K +  D +   +E      ++ 
Sbjct: 8   KYSLGKT--------LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELD----IMK 55

Query: 164 RLHHRNLVNL 173
            L H N++ L
Sbjct: 56  VLDHVNIIKL 65

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 22/126 (17%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
            +G+GA+G V  A    T E VAVK++         E  + E+ +   L+H N+V   G+
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR--------GLEYLHD 228
             E     L   + S G L   +  E    +            A+        G+ YLH 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRI--EPDIGMP--------EPDAQRFFHQLMAGVVYLHG 123

Query: 229 -GVSCH 233
            G+  H
Sbjct: 124 IGI-TH 128

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 51.3 bits (123), Expect = 7e-08
 Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 11/176 (6%)

Query: 30  FRYHRKRSQIGNSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEG 89
            +++++R +      R    L          S+  D +       ++ +  + +    E 
Sbjct: 13  NKFNKERRR-ARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTEN 71

Query: 90  FKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLA--- 145
               ++     +P+++         +   +IG+G    V +    +TG   AVK++    
Sbjct: 72  LYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTA 131

Query: 146 -----TDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
                   ++  +  + E  +L ++  H +++ L+          LV+  M KG L
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
           IG G++    +    +T    AVK++    +   +E +   +LL    H N++ L     
Sbjct: 30  IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYD 86

Query: 179 EKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +     +V   M  G L         + E            +   + + +EYLH 
Sbjct: 87  DGKYVYVVTELMKGGELLDKILRQKFFSEREA-------SAVLFTITKTVEYLHA 134

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 50.8 bits (122), Expect = 9e-08
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLG 163
            ++  +          GQG FG V   +   TG +VA+K +  D +   +E Q  +  L 
Sbjct: 24  RFQVERM--------AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLA 74

Query: 164 RLHHRNLVNL 173
            LHH N+V L
Sbjct: 75  VLHHPNIVQL 84

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 22/126 (17%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
            +G+GA+G V  A    T E VAVK++         E  + E+ +   L+H N+V   G+
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR--------GLEYLHD 228
             E     L   + S G L   +  E    +            A+        G+ YLH 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRI--EPDIGMP--------EPDAQRFFHQLMAGVVYLHG 123

Query: 229 -GVSCH 233
            G+  H
Sbjct: 124 IGI-TH 128

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 10/79 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           L+G+G++G V +     T    AVK+L          GE   + E+ LL RL H+N++ L
Sbjct: 12  LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

Query: 174 --VGYCAEKGQHMLVYVFM 190
             V Y  EK +   +Y+ M
Sbjct: 72  VDVLYNEEKQK---MYMVM 87

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 11/116 (9%)

Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVG- 175
           ++G G  G V +     TG+  A+K+L         + + EV    +     ++V ++  
Sbjct: 36  VLGLGVNGKVLECFHRRTGQKCALKLLYD-----SPKARQEVDHHWQASGGPHIVCILDV 90

Query: 176 YCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           Y         + + M     G L S + +      T      I  D+   +++LH 
Sbjct: 91  YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 11/65 (16%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVK--VLATDSKQGEKEFQT---------EVMLLGRLHHR 168
           I  G++G V     S G  VA+K         +                E+ LL   HH 
Sbjct: 30  ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89

Query: 169 NLVNL 173
           N++ L
Sbjct: 90  NILGL 94

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVL---------ATDSKQGEKEFQTEVMLLGRL-HHR 168
           +G+G    V +     T +  AVK++         A + ++  +    EV +L ++  H 
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSL-----ASHLYDENYGPLTWNLRVHIALDVARGL 223
           N++ L           LV+  M KG L           E            I   +   +
Sbjct: 85  NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET-------RKIMRALLEVI 137

Query: 224 EYLHD 228
             LH 
Sbjct: 138 CALHK 142

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 11/122 (9%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLH---H 167
           +   +IG+G FG VY  +   TG+  A+K L       KQGE     E ++L  +     
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 251

Query: 168 RNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             +V +  Y       +  +   M+ G L  HL     G  +       A ++  GLE++
Sbjct: 252 PFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHM 308

Query: 227 HD 228
           H+
Sbjct: 309 HN 310

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC 177
           +G G  G V +     T E  A+K+L         + + EV L  R     ++V +V   
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKML---QDC--PKARREVELHWRASQCPHIVRIVDVY 124

Query: 178 ----AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSC 232
               A +   ++V   +  G L S + D      T      I   +   ++YLH   +  
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-A 183

Query: 233 H 233
           H
Sbjct: 184 H 184

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVG-Y 176
           +G G  G V +     T E  A+K+L         + + EV L  R     ++V +V  Y
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKML---QDC--PKARREVELHWRASQCPHIVRIVDVY 80

Query: 177 CAEKGQHMLVYVFM 190
                    + + M
Sbjct: 81  ENLYAGRKCLLIVM 94

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 48.3 bits (114), Expect = 7e-07
 Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 20/146 (13%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK--------QGE 152
           +P    +  +K        IG+G FG V++   +    VA+K++A +          +  
Sbjct: 17  LPTEKLQRCEK--------IGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTF 67

Query: 153 KEFQTEVMLL---GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTW 209
           +E   E+++      L         G+      H +   +      A   Y+   G    
Sbjct: 68  EEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSAND 127

Query: 210 NLRVHIALDVARGLEYLHDGVSCHLF 235
                    +   LE+   G+     
Sbjct: 128 RPDFFKDDQLFIVLEFEFGGIDLEQM 153

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 48.1 bits (115), Expect = 8e-07
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            IG G FG     +   T E VAVK +   +   E   Q E++    L H N+V  
Sbjct: 27  DIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRF 81

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 24/135 (17%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH----------- 166
            +G G F  V+ A+ M     VA+K++    K   +  + E+ LL R++           
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84

Query: 167 HRNLVNLVG---YCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
             +++ L+    +    G H+ +V+  + + +L + +    +  +       I+  +  G
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLLG 143

Query: 223 LEYLHD---GVSCHL 234
           L+Y+H     +   +
Sbjct: 144 LDYMHRRCGIIHTDI 158

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 14/125 (11%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--------ATDSKQGEKEFQTEVMLLGRLHHRNL 170
           +G GAFG V+ A      + V VK +                 +   E+ +L R+ H N+
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHD 228
           + ++     +G   LV      G     L+   + +  L   L  +I   +   + YL  
Sbjct: 92  IKVLDIFENQGFFQLVMEKHGSG---LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL 148

Query: 229 GVSCH 233
               H
Sbjct: 149 KDIIH 153

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNLVGY 176
            +G+G FG V++A+        A+K +   +++  +E    EV  L +L H  +V     
Sbjct: 13  CMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 72

Query: 177 CAEKGQHMLVYVFMS 191
             E            
Sbjct: 73  WLETPPEKWQEEMDE 87

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
           Y DL+         +G G  G V+ A      + VA+K +     Q  K    E+ ++ R
Sbjct: 13  YMDLKP--------LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64

Query: 165 LHHRNLVNL 173
           L H N+V +
Sbjct: 65  LDHDNIVKV 73

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 17/65 (26%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHHRN 169
           IG G++G V +A        VA+K +        + F+          E+ +L RL+H +
Sbjct: 61  IGTGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREIAILNRLNHDH 113

Query: 170 LVNLV 174
           +V ++
Sbjct: 114 VVKVL 118

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 15/120 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHR------ 168
           +IG+G+FG V KA      + VA+K++       +Q       E+ +L  L  +      
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA----AEEIRILEHLRKQDKDNTM 159

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           N+++++     +    + +  +S  +L   +    +   +  L    A  + + L+ LH 
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 25/128 (19%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNL 170
               +IG+GAF  V   +M  TG+  A+K++      K+GE   F+ E  +L     R +
Sbjct: 64  EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI 123

Query: 171 VNLVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR------- 221
             L  + A + ++ L  V  +   G L + L    +G         I  ++AR       
Sbjct: 124 TQL--HFAFQDENYLYLVMEYYVGGDLLTLLS--KFGE-------RIPAEMARFYLAEIV 172

Query: 222 -GLEYLHD 228
             ++ +H 
Sbjct: 173 MAIDSVHR 180

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 34/145 (23%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL------------------------ATDSKQGEK 153
            IG+G++G V  A   +     A+KVL                            +    
Sbjct: 20  EIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGP 79

Query: 154 EFQT--EVMLLGRLHHRNLVNL--VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTW 209
             Q   E+ +L +L H N+V L  V     +    +V+  +++G +   +      PL+ 
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136

Query: 210 NLRVHIALDVARGLEYLHD-GVSCH 233
           +       D+ +G+EYLH   +  H
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKI-IH 160

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 13/86 (15%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
           Y+ ++K        +G+G +  V++A  ++  E V VK+L       +K+ + E+ +L  
Sbjct: 38  YQLVRK--------LGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKKIKREIKILEN 86

Query: 165 L-HHRNLVNLVGYCAEKGQHMLVYVF 189
           L    N++ L     +        VF
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVF 112

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 26/128 (20%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
            F  ++G+G+F  V  A+  +T    A+K+L       E +      E  ++ RL H   
Sbjct: 33  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92

Query: 171 VNLVGYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR------- 221
           V L  Y   +    L +   +   G L  ++                     R       
Sbjct: 93  VKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIG----------SFDETCTRFYTAEIV 140

Query: 222 -GLEYLHD 228
             LEYLH 
Sbjct: 141 SALEYLHG 148

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 25/124 (20%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
           +IG+GAFG V   ++ +  +  A+K+L      K+ E   F+ E  +L     + +  L 
Sbjct: 81  VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL- 139

Query: 175 GYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR--------GLE 224
            + A +  + L  V  +   G L + L               +  ++AR         ++
Sbjct: 140 -HYAFQDDNNLYLVMDYYVGGDLLTLLS---------KFEDRLPEEMARFYLAEMVIAID 189

Query: 225 YLHD 228
            +H 
Sbjct: 190 SVHQ 193

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 24/127 (18%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
                IG+G+FG V   Q   T +  A+K +         E +    E+ ++  L H  L
Sbjct: 18  EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFL 77

Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR-------- 221
           VNL  Y  +  + M +V   +  G L  HL             VH   +  +        
Sbjct: 78  VNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQN----------VHFKEETVKLFICELVM 126

Query: 222 GLEYLHD 228
            L+YL +
Sbjct: 127 ALDYLQN 133

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G G FG V   +   TG  VAVK+L      S     + + E+  L    H +++ L
Sbjct: 18  TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 15/64 (23%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLA------TDSKQGEKEFQT--EVMLLGRLHHRNL 170
           IG+G++G VY A   +T + VA+K +        D K+         E+ +L RL    +
Sbjct: 34  IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR------ILREITILNRLKSDYI 87

Query: 171 VNLV 174
           + L 
Sbjct: 88  IRLY 91

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
           IG+G F  V  A+ + TG  VA+K++     +    ++   EV ++  L+H N+V L
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G G FG V   +   TG  VAVK+L      S     + + E+  L    H +++ L
Sbjct: 23  TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 10/120 (8%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEF---QTEVMLLGRLHHRNL 170
           ++  L+G+G FG V   +  +TG   A+K+L  +    + E     TE  +L    H  L
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67

Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHI-ALDVARGLEYLHD 228
             L  Y  +    +  V  + + G L  HL  E         R      ++   LEYLH 
Sbjct: 68  TALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RARFYGAEIVSALEYLHS 123

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 27/124 (21%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKE-FQTEVMLLGRLHHRNLVNLV 174
           +IG+GAFG V   +  ST +  A+K+L+     K+ +   F  E  ++   +   +V L 
Sbjct: 76  VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 134

Query: 175 GYCAEKGQHMLVYV--FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR--------GLE 224
            + A +    L  V  +M  G L + +               +    AR         L+
Sbjct: 135 -FYAFQDDRYLYMVMEYMPGGDLVNLMS-----------NYDVPEKWARFYTAEVVLALD 182

Query: 225 YLHD 228
            +H 
Sbjct: 183 AIHS 186

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 14/62 (22%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL-----ATDSKQGEKEFQT--EVMLLGRLHHRNLV 171
           +G+GA+G V  A    TGE VA+K +        + +      T  E+ +L    H N++
Sbjct: 19  LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR------TLREIKILKHFKHENII 72

Query: 172 NL 173
            +
Sbjct: 73  TI 74

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
            +G+G+FG V  A    T + VA+K ++      S    +  + E+  L  L H +++ L
Sbjct: 16  TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKL 74

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 16/127 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEF------QTEVMLLGRLHHR--N 169
           L+G G FG VY    +S    VA+K +  D      E         EV+LL ++      
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH 227
           ++ L+ +       +L+   + +      L+D     G L   L       V   + + H
Sbjct: 110 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166

Query: 228 D-GVSCH 233
           + GV  H
Sbjct: 167 NCGV-LH 172

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 18/129 (13%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL------ATDSKQGEKEFQTEVMLLGRLH----H 167
           L+G+G FG V+    ++    VA+KV+                   EV LL ++     H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEY 225
             ++ L+ +   +       + + +   A  L+D     GPL           V   +++
Sbjct: 98  PGVIRLLDWFETQEG---FMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154

Query: 226 LHD-GVSCH 233
            H  GV  H
Sbjct: 155 CHSRGV-VH 162

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 27/139 (19%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---T 157
           P+YS +D           +G G+FG V+  +    G   A+KVL  +     K+ +    
Sbjct: 1   PKYSLQDF-----QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 55

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           E ++L  + H  ++ + G   +  Q  ++  ++  G L S L                  
Sbjct: 56  ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ----------RFPN 105

Query: 218 DVAR--------GLEYLHD 228
            VA+         LEYLH 
Sbjct: 106 PVAKFYAAEVCLALEYLHS 124

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK---QGEKEFQTEVMLLGRL-----HHRN 169
            +G G FG V   Q +   +  AVKV+    K         + E  +L ++     ++ N
Sbjct: 42  KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA----KIEADILKKIQNDDINNNN 97

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEY 225
           +V   G       HM     +    L   LY+     NY            +++ + L Y
Sbjct: 98  IVKYHGKFMYYD-HM----CLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNY 152

Query: 226 LHD 228
           L  
Sbjct: 153 LRK 155

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEF---QTEVMLLGRLHHRNL 170
            +  L+G+G FG V   +  +TG   A+K+L  +    + E     TE  +L    H  L
Sbjct: 151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210

Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHI-ALDVARGLEYLH 227
             L  Y  +    +  V  + + G L  HL  E         R      ++   L+YLH
Sbjct: 211 TALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED---RARFYGAEIVSALDYLH 265

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLL-----------GRLHH 167
           +G G F  V+ +  +   + VA+KV+ +     E     E+ LL            R   
Sbjct: 45  LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETA-LDEIRLLKSVRNSDPNDPNREMV 103

Query: 168 RNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
             L++        G H+ +V+  +    L   +   NY  L       I   V +GL+YL
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL 162

Query: 227 HD 228
           H 
Sbjct: 163 HT 164

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 17/64 (26%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHHRN 169
           +G GA+G V  A    +GE VA+K L+       + FQ+         E++LL  + H N
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHEN 84

Query: 170 LVNL 173
           ++ L
Sbjct: 85  VIGL 88

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 26/129 (20%)

Query: 115 NFTTLIGQGAFGPVY----KAQMSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHR 168
               ++GQG+FG V+     +     +  A+KVL   +   +     + E  +L  ++H 
Sbjct: 27  ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 86

Query: 169 NLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR------ 221
            +V L  Y  +    + L+  F+  G L + L  E          V    +  +      
Sbjct: 87  FIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKE----------VMFTEEDVKFYLAEL 135

Query: 222 --GLEYLHD 228
              L++LH 
Sbjct: 136 ALALDHLHS 144

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
           +    +G G+FG V   +   +G   A+K+L        K+ +    E  +L  ++   L
Sbjct: 44  DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR--------G 222
           V L     +     +V  +++ G + SHL                +   AR         
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----------RFSEPHARFYAAQIVLT 153

Query: 223 LEYLHD 228
            EYLH 
Sbjct: 154 FEYLHS 159

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 25/95 (26%)

Query: 89  GFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD 147
           GF R  V   +      Y+DLQ         +G GA+G V  A    TG  VA+K L   
Sbjct: 10  GFYRQEVTKTAWEVRAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLY-- 59

Query: 148 SKQGEKEFQT---------EVMLLGRLHHRNLVNL 173
                + FQ+         E+ LL  + H N++ L
Sbjct: 60  -----RPFQSELFAKRAYRELRLLKHMRHENVIGL 89

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 14/62 (22%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL-----ATDSKQGEKEFQT--EVMLLGRLHHRNLV 171
           IG+GA+G V  A        VA+K +      T  ++      T  E+ +L R  H N++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQR------TLREIKILLRFRHENII 88

Query: 172 NL 173
            +
Sbjct: 89  GI 90

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 25/78 (32%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT------- 157
           Y++L+         IG GA G V  A        VA+K L+       + FQ        
Sbjct: 64  YQNLKP--------IGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRA 108

Query: 158 --EVMLLGRLHHRNLVNL 173
             E++L+  ++H+N+++L
Sbjct: 109 YRELVLMKCVNHKNIISL 126

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVL---------ATDSKQGEKEFQTEVMLLGR 164
           NF  ++G+G+FG V  ++   T E  AVK+L           +    EK      +L   
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR-----VLALP 398

Query: 165 LHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
                L  L   C +    +  V  +++ G L  H+     G       V  A ++A GL
Sbjct: 399 GKPPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGL 455

Query: 224 EYLHD 228
            +L  
Sbjct: 456 FFLQS 460

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 15/120 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHR------ 168
           LIG+G+FG V KA      E VA+K++        Q     Q EV LL  ++        
Sbjct: 61  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA----QIEVRLLELMNKHDTEMKY 116

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            +V+L  +   +    LV+  +S  +L   L + N+  ++ NL    A  +   L +L  
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 24/78 (30%)

Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLA------TDSKQGEKEFQT- 157
           Y+ ++K        +G+GA+G V+K+    TGE VAVK +       TD++      +T 
Sbjct: 11  YELVKK--------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQ------RTF 56

Query: 158 -EVMLLGRLH-HRNLVNL 173
            E+M+L  L  H N+VNL
Sbjct: 57  REIMILTELSGHENIVNL 74

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVL---------ATDSKQGEKEFQTEVMLLGR 164
               ++G+G+FG V+ A+   T +  A+K L           +    EK      +L   
Sbjct: 20  ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR-----VLSLA 74

Query: 165 LHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
             H  L ++     +  +++  V  +++ G L  H+          +     A ++  GL
Sbjct: 75  WEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGL 131

Query: 224 EYLHD 228
           ++LH 
Sbjct: 132 QFLHS 136

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 17/64 (26%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT---------EVMLLGRLHHRN 169
           IG GA G V  A        VA+K L+       + FQ          E++L+  ++H+N
Sbjct: 33  IGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNHKN 85

Query: 170 LVNL 173
           ++ L
Sbjct: 86  IIGL 89

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSK--QGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG G FG +   + + T E VA+K+    S+  Q   E++    L        +  +  +
Sbjct: 17  IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG---IPQVYYF 73

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                 + +V   +   SL   L+D      +    + IA+ +   +EY+H 
Sbjct: 74  GPCGKYNAMVLELLGP-SL-EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	235
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.87
3uqc_A	286	Probable conserved transmembrane protein; structur	99.87
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.87
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.87
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.87
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.87
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.87
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.87
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.87
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.86
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.86
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.86
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.86
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.86
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.86
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.86
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.86
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.86
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.86
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.86
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.86
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.86
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.86
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.86
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.86
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.86
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.85
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.85
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.85
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.85
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.85
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.85
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.85
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.85
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.85
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.84
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.84
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.84
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.84
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.84
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.84
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.84
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.84
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.84
3bhy_A	283	Death-associated protein kinase 3; death associate	99.84
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.84
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.84
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.84
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.84
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.84
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.84
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.84
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.84
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.84
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.84
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.84
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.84
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.84
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.84
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.83
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.83
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.83
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.83
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.83
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.83
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.83
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.83
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.83
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.83
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.83
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.83
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.83
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.83
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.83
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.83
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.83
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.83
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.83
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.83
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.83
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.83
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.83
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.83
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.83
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.83
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.83
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.83
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.83
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.83
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.82
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.82
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.82
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.82
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.82
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.82
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.82
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.82
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.82
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.82
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.82
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.82
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.82
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.82
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.82
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.82
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.82
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.82
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.82
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.82
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.82
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.82
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.82
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.82
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.82
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.82
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.82
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.81
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.81
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.81
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.81
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.81
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.81
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.81
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.81
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.81
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.81
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.81
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.81
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.8
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.8
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.8
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.8
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.8
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.8
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.8
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.8
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.8
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.8
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.8
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.8
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.8
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.8
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.79
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.79
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.79
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.79
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.79
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.79
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.79
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.79
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.78
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.78
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.78
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.78
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.78
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.78
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.78
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.78
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.77
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.77
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.77
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.77
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.77
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.77
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.77
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.76
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.76
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.76
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.75
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.75
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.75
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.75
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.75
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.74
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.74
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.74
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.74
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.73
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.73
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.72
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.72
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.7
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.7
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.7
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.65
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.55
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.51
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.7
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.28
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.17
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.02
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	97.68
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	97.68
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	97.65
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	97.31
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.28
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.16
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.02
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.75
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.71
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.67
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.64
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.41
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.54
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	94.56
1iij_A	35	ERBB-2 receptor protein-tyrosine kinase; alpha-hel	94.49
2l34_A	33	TYRO protein tyrosine kinase-binding protein; immu	94.1
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	93.82
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	93.34
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	93.29
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	92.74
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.42
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	92.05
2klu_A	70	T-cell surface glycoprotein CD4; cell membrane, di	91.68
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	91.65
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	90.44
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	90.05
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	89.51
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	88.75
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	88.14
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	86.67
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	86.14
1afo_A	40	Glycophorin A; integral membrane protein, transmem	84.74
2llm_A	43	Amyloid beta A4 protein; alzheimer'S disease, prot	84.67
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	84.22
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	83.95
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	83.77
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	83.6
2l9u_A	40	Receptor tyrosine-protein kinase ERBB-3; transmenb	83.52
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	83.2
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	81.77
3mes_A	424	Choline kinase; malaria, structural genomics, stru	80.75

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=7.3e-30  Score=204.27  Aligned_cols=127  Identities=31%  Similarity=0.476  Sum_probs=110.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      +.+..+.+.+.||+|+||.||+|.+.      ++..||||.++.......++|.+|+.+|++++|||||+++|+|.+.+.
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            44455667889999999999999753      367899999987777777889999999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDE-----------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++|||||++|+|.++|+..           ....+++.+++.++.||+.||+|||+++||||+
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  153 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRD  153 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence            99999999999999999642           235699999999999999999999999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=7.8e-30  Score=206.72  Aligned_cols=125  Identities=31%  Similarity=0.476  Sum_probs=110.6

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      +.++.+.+.||+|+||.||+|.+.      ++..||||.++..+....++|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            344566788999999999999863      36789999998777777788999999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDEN-------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||||++|+|.++++...             ..++++.+++.++.||+.||+|||+++||||+
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  183 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD  183 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence            9999999999999996432             24689999999999999999999999999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=8.4e-30  Score=204.71  Aligned_cols=129  Identities=29%  Similarity=0.450  Sum_probs=109.8

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE  179 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~  179 (235)
                      .++...++.+.+.||+|+||.||+|.+.      ++..||||.+... .....++|.+|+.++++++|||||+++|+|.+
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  100 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK  100 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence            3444555677889999999999999862      4568999999755 34456789999999999999999999999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++.++|||||++|+|.++|....              ...+++.+++.++.|||.||+|||+++||||+
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  170 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKD  170 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999996421              24589999999999999999999999999997

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=3e-28  Score=197.98  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=105.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +|.+.+.||+|+||.||++.. .+++.||||.+...  .....+.+.+|+.+++.++|||||++++++.+.+..|+||||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            466778999999999999964 56899999999765  444566899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |++|+|.+++.......+++.++..++.||+.||+|||++|||||+
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRD  150 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD  150 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETT
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            9999999999766666789999999999999999999999999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.95  E-value=2.6e-28  Score=195.50  Aligned_cols=124  Identities=28%  Similarity=0.433  Sum_probs=106.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ++...++.+.+.||+|+||.||+|.+.  ..||||.++..  .....+.|.+|+.++++++|||||+++|++.. +..++
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i  108 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI  108 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence            444555667889999999999999874  36999998644  44556789999999999999999999998865 46799


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||||++|+|.++|+.. ...+++.+++.++.||+.||+|||+++||||+
T Consensus       109 VmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRD  157 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD  157 (307)
T ss_dssp             EEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             EEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence            99999999999999653 35699999999999999999999999999997

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=1.2e-27  Score=191.51  Aligned_cols=121  Identities=21%  Similarity=0.283  Sum_probs=108.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.+.+.   +....+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            477889999999999999964 57899999999754   23445678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||++|+|.+++...  +.+++.++..++.||+.||+|||++|||||+
T Consensus       113 y~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD  157 (311)
T 4aw0_A          113 YAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD  157 (311)
T ss_dssp             CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            99999999999643  5699999999999999999999999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.94  E-value=1.2e-27  Score=194.19  Aligned_cols=119  Identities=24%  Similarity=0.285  Sum_probs=107.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      |++.+.||+|+||.||++.. .+|+.||||.+........+.+.+|+.+|+.++|||||++++++.+.+..|+|||||++
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  155 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  155 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            55667899999999999975 46899999999766545556788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++..   ..+++.++..++.||+.||+|||++||||||
T Consensus       156 g~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  195 (346)
T 4fih_A          156 GALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD  195 (346)
T ss_dssp             EEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            999999954   3589999999999999999999999999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.94  E-value=6e-27  Score=194.57  Aligned_cols=119  Identities=24%  Similarity=0.285  Sum_probs=107.7

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      |++.+.||+|+||.||++.. .+|+.||||.+........+.+.+|+.+|+.++|||||++++++.+.+.+|+|||||++
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            45567899999999999975 56899999999876555566789999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++..   ..+++.++..++.||+.||+|||++||||||
T Consensus       233 G~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRD  272 (423)
T 4fie_A          233 GALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD  272 (423)
T ss_dssp             EEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            999999954   3489999999999999999999999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=2.4e-26  Score=182.80  Aligned_cols=118  Identities=27%  Similarity=0.346  Sum_probs=103.0

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEEEE
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVYV  188 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e  188 (235)
                      +.+.||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+.+++.++|||||++++++.+    .+..++|||
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE  109 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence            456799999999999975 46789999999754  44456679999999999999999999999865    346799999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      ||++|+|.+++...  ..+++..+..++.||+.||+|||+++  ||||+
T Consensus       110 y~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRD  156 (290)
T 3fpq_A          110 LMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRD  156 (290)
T ss_dssp             CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCC
T ss_pred             CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecc
Confidence            99999999999653  56899999999999999999999999  99997

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=2.9e-26  Score=180.93  Aligned_cols=120  Identities=19%  Similarity=0.305  Sum_probs=103.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.+...   .......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            567789999999999999974 46899999999754   23345678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+ +|+|.+++...  ..+++.++..++.||+.||+|||++||+||+
T Consensus        94 y~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD  137 (275)
T 3hyh_A           94 YA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRD  137 (275)
T ss_dssp             CC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            99 67999999654  5699999999999999999999999999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=6.3e-27  Score=187.15  Aligned_cols=121  Identities=22%  Similarity=0.235  Sum_probs=101.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +|++.+.||+|+||.||++..    ..++.||+|.+...  .......+.+|+.+++.++|||||++++++.+.+..|+|
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            467889999999999999964    24678999999754  222334678999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||++|+|.+++...  ..+++.++..++.||+.||+|||++|||||+
T Consensus       105 mEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  151 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRD  151 (304)
T ss_dssp             ECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             EEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            9999999999999653  5699999999999999999999999999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=1.2e-26  Score=189.58  Aligned_cols=129  Identities=28%  Similarity=0.434  Sum_probs=109.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCC------CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCC-CCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMST------GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHH-RNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~  178 (235)
                      +++++.++.+.+.||+|+||.||+|.+..      ++.||||.+... .....+.|.+|+.+|.+++| ||||+++|+|.
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            56777888889999999999999997532      247999999765 34456689999999999965 99999999996


Q ss_pred             e-CCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 E-KGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~-~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      . .+..++|||||++|+|.++|+...              ...+++.+++.++.|||.||+|||+++||||+
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRD  210 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD  210 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCc
Confidence            6 457899999999999999996421              24589999999999999999999999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=2.4e-26  Score=186.00  Aligned_cols=115  Identities=24%  Similarity=0.248  Sum_probs=102.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+.+.||+|+||.||++.. .+++.||||.++....     ..+|+.+++.++|||||++++++.+.+..|+|||||++
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            44567899999999999975 4689999999975432     24799999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  +.+++.++..++.||+.||+|||+++|||||
T Consensus       135 g~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  175 (336)
T 4g3f_A          135 GSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGD  175 (336)
T ss_dssp             CBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            9999999643  5699999999999999999999999999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=1.1e-25  Score=180.28  Aligned_cols=123  Identities=21%  Similarity=0.276  Sum_probs=101.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC---------
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG---------  181 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---------  181 (235)
                      .|++.+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|+.+|+.++|||||++++++.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            466778999999999999975 46889999999755 3444567899999999999999999999986543         


Q ss_pred             ---EEEEEEEcccCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 ---QHMLVYVFMSKGSLASHLYDENY-GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ---~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                         ..|++||||++|+|.+++..... ...++..+..++.||+.||+|||++|||||+
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRD  143 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRD  143 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCcccc
Confidence               36899999999999999965321 2345667889999999999999999999997

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.92  E-value=2.3e-25  Score=178.92  Aligned_cols=118  Identities=28%  Similarity=0.355  Sum_probs=98.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC----EEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||+|.+ +|+.||||.+...... ...+..|+..+..++|||||++++++...+    ..++|||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            345678899999999999998 6899999999644322 122345666677889999999999997653    5799999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG--------VSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~--------~ivHr~  235 (235)
                      ||++|+|.++++.   ..+++..+..++.|++.||+|||++        +||||+
T Consensus        82 y~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRD  133 (303)
T 3hmm_A           82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSC
T ss_pred             CCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeecc
Confidence            9999999999965   3589999999999999999999987        999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=1.7e-24  Score=187.46  Aligned_cols=122  Identities=27%  Similarity=0.419  Sum_probs=110.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||++.. .+|+.+|+|.+........+.+.+|+.+|+.++||||+++++++.+.+.++++||||+
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~  237 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  237 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence            567788999999999999964 5789999999987766666788999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++.++..++.||+.||+|||+++|+||+
T Consensus       238 gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRD  280 (573)
T 3uto_A          238 GGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD  280 (573)
T ss_dssp             CCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999999543 35699999999999999999999999999996

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.91  E-value=2e-24  Score=179.24  Aligned_cols=120  Identities=24%  Similarity=0.332  Sum_probs=103.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe------CCEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE------KGQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~  183 (235)
                      +|.+.+.||+|+||.||++.. .+|+.||||.++..  .....+.+.+|+.+|+.++|||||++++++..      .+.+
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~  134 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV  134 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence            466778999999999999965 57899999999754  33445678899999999999999999998754      3578


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|||||+ |+|.+++..  ...+++.++..++.||+.||+|||++|||||+
T Consensus       135 ~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~~iiHRD  183 (398)
T 4b99_A          135 YVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD  183 (398)
T ss_dssp             EEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCC
Confidence            99999996 689999954  36799999999999999999999999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.89  E-value=4.5e-23  Score=169.20  Aligned_cols=116  Identities=19%  Similarity=0.251  Sum_probs=101.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .|.+.+.||+|+||.||++..    ..++.||+|.+....  ....+.+|+.++..+ +||||+++++++.+.+..++||
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            466778999999999999964    245789999986543  234678999999988 7999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++     ..+++.++..++.||+.||+|||++|||||+
T Consensus       100 E~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRD  142 (361)
T 4f9c_A          100 PYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRD  142 (361)
T ss_dssp             ECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCc
Confidence            999999999998     2489999999999999999999999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=2.9e-23  Score=180.38  Aligned_cols=120  Identities=24%  Similarity=0.289  Sum_probs=100.8

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHH---HHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQ---TEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      |.+.++||+|+||.||++.. .++..+|+|.+.+..   ........   .++.+++.++|||||++++.+.+.+.+|+|
T Consensus       191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV  270 (689)
T 3v5w_A          191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI  270 (689)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence            44557899999999999964 568999999996431   11222233   345677888999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||++|+|.++|...  ..+++..+..++.||+.||+|||++|||||+
T Consensus       271 mEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRD  317 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRD  317 (689)
T ss_dssp             ECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999653  5699999999999999999999999999997

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=4.9e-22  Score=159.88  Aligned_cols=122  Identities=25%  Similarity=0.417  Sum_probs=110.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ++.+.+.||+|+||.||++.. .++..+|+|.+...+....+.|.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   90 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK   90 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence            456678899999999999975 4588999999876666777889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++.++..++.|++.||+|||+++|+||+
T Consensus        91 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~d  133 (310)
T 3s95_A           91 GGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD  133 (310)
T ss_dssp             TCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            99999999653 35689999999999999999999999999996

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.87  E-value=1.6e-22  Score=166.85  Aligned_cols=128  Identities=27%  Similarity=0.483  Sum_probs=109.0

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYC  177 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~  177 (235)
                      ++....+.+.+.||+|+||.||++...        .+..||+|.+... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            344556777889999999999999742        3457999999765 344556799999999999 899999999999


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+..++||||+++|+|.+++....              ...+++.++..++.||+.||+|||++||+||+
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  228 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRD  228 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999999999999999996532              13478999999999999999999999999996

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.87  E-value=2.5e-22  Score=160.03  Aligned_cols=123  Identities=11%  Similarity=0.095  Sum_probs=105.8

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      +...+|.+.+.||+|+||.||++... .++.||+|.+....   ....+.+.+|+..+..++||||+++++++...+..+
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            33445677889999999999999764 47899999997652   334467899999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++++|.+++..   . ....+...++.|++.||+|||++||+||+
T Consensus       108 lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~givH~D  154 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAGVALSI  154 (286)
T ss_dssp             EEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            99999999999999943   2 35667899999999999999999999996

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.87  E-value=5.8e-22  Score=160.23  Aligned_cols=122  Identities=39%  Similarity=0.720  Sum_probs=109.2

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      |.+.+.||+|+||.||++...++..||+|.+........+.+.+|+.+++.++||||+++++++...+..+++|||+++|
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG  120 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred             cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence            45567899999999999998788999999987766666678999999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++....  ...+++..+..++.|++.||+|||++|++||+
T Consensus       121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~d  164 (321)
T 2qkw_B          121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRD  164 (321)
T ss_dssp             BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCC
Confidence            9999996433  23589999999999999999999999999996

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.87  E-value=7.1e-22  Score=160.38  Aligned_cols=121  Identities=21%  Similarity=0.293  Sum_probs=108.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~   95 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY   95 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence            356678999999999999975 57899999999754  444556788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        96 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD  139 (328)
T 3fe3_A           96 ASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRD  139 (328)
T ss_dssp             CTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence            9999999999553  4589999999999999999999999999996

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.87  E-value=1.4e-22  Score=173.06  Aligned_cols=128  Identities=26%  Similarity=0.427  Sum_probs=113.1

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCC-CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      +++....+.+.+.||+|+||.||+|.+.. +..||+|.+.... ...+.|.+|+.+++.++||||+++++++...+..++
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            45556667788999999999999998754 7889999997543 345689999999999999999999999999899999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+++|+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrD  343 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN  343 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999999765556789999999999999999999999999996

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.87  E-value=2.3e-21  Score=156.87  Aligned_cols=118  Identities=23%  Similarity=0.278  Sum_probs=106.5

Q ss_pred             hhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      ...+.||+|+||.||++... +++.||||.+........+.+.+|+.+++.++||||+++++.+...+..+++|||++++
T Consensus        48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  127 (321)
T 2c30_A           48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG  127 (321)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCC
Confidence            34467999999999999764 68999999998766666678999999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus       128 ~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  166 (321)
T 2c30_A          128 ALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRD  166 (321)
T ss_dssp             BHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            99999843   4589999999999999999999999999996

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.87  E-value=1.4e-21  Score=162.11  Aligned_cols=123  Identities=23%  Similarity=0.244  Sum_probs=109.7

Q ss_pred             HhhhhhccCCC--CceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQG--AFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G--~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      +|.+.+.||+|  +||.||++... ++..||+|.+...  .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence            45677899999  99999999764 6889999999754  3444567889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  153 (389)
T 3gni_B          106 SFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRS  153 (389)
T ss_dssp             ECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999999999766556799999999999999999999999999996

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.87  E-value=7.9e-22  Score=159.86  Aligned_cols=126  Identities=25%  Similarity=0.416  Sum_probs=109.6

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      +...++.+.+.||+|+||.||++...    .+..||+|.+... .....+.|.+|+.+++.++||||+++++++.+.+..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            44456677899999999999999763    3446999999765 445566899999999999999999999999988899


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++... ...+++.++..++.|++.||+|||+++|+||+
T Consensus       126 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  176 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD  176 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            9999999999999999543 35689999999999999999999999999996

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.87  E-value=5.6e-22  Score=163.68  Aligned_cols=126  Identities=26%  Similarity=0.435  Sum_probs=109.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      +....+.+.+.||+|+||.||+|...    .+..||+|.+... .....+.|.+|+.+++.++||||+++++++...+..
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            33445667789999999999999753    4678999999765 445566899999999999999999999999998899


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++... ...+++.++..++.||+.||+|||+++|+||+
T Consensus       122 ~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  172 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD  172 (373)
T ss_dssp             EEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            9999999999999999643 34689999999999999999999999999996

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.87  E-value=1.1e-21  Score=157.16  Aligned_cols=120  Identities=22%  Similarity=0.313  Sum_probs=107.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  100 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence            456678899999999999974 5688999999976655556778999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++...   .+++..+..++.|++.||+|||++||+||+
T Consensus       101 ~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D  141 (297)
T 3fxz_A          101 GGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (297)
T ss_dssp             TCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCC
Confidence            99999999653   489999999999999999999999999996

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.87  E-value=1.6e-21  Score=160.31  Aligned_cols=121  Identities=23%  Similarity=0.326  Sum_probs=107.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+.....      ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            456778999999999999975 4688999999976422      135678999999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+++|+|.+++..  ...+++..+..++.||+.||+|||++||+||+
T Consensus        93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  140 (361)
T 2yab_A           93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (361)
T ss_dssp             EEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999999999999943  35699999999999999999999999999996

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.86  E-value=1.8e-22  Score=170.70  Aligned_cols=127  Identities=23%  Similarity=0.361  Sum_probs=110.5

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +++....+.+.+.||+|+||.||+|.+..+..||||.+.... ...+.|.+|+.+++.++||||+++++++. .+..++|
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            355566777889999999999999998778899999997543 34678999999999999999999999986 5578999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  309 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD  309 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999999999999654333588899999999999999999999999996

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.86  E-value=2.1e-21  Score=159.62  Aligned_cols=124  Identities=22%  Similarity=0.302  Sum_probs=109.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ....|.+.+.||+|+||.||++.. .++..+|+|.+...  .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            456778889999999999999975 46889999999755  334456789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++..  ...+++.++..++.||+.||+|||++||+||+
T Consensus       107 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~D  153 (362)
T 2bdw_A          107 FDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNGIVHRN  153 (362)
T ss_dssp             ECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            999999999999854  35689999999999999999999999999996

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.86  E-value=8.1e-22  Score=155.21  Aligned_cols=123  Identities=27%  Similarity=0.388  Sum_probs=108.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--CEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--GQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~  187 (235)
                      .++.+.+.||+|+||.||++.. .+..+|+|.+...  .....+.+.+|+.+++.++||||+++++++.+.  +..+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            3456678999999999999998 5889999999755  344456799999999999999999999999876  6789999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      ||+++|+|.+++.......+++..+..++.||+.||+|||+++  ++||+
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~d  138 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA  138 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCC
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence            9999999999997655556899999999999999999999999  99996

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.86  E-value=3.3e-21  Score=156.27  Aligned_cols=123  Identities=23%  Similarity=0.316  Sum_probs=108.5

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...|.+.+.||+|+||.||++.. .++..+|+|.+.....      ...+.+.+|+.+++.++||||+++++++.+....
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            35577889999999999999975 4688999999975422      2356789999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++..  ...+++..+..++.||+.||+|||+++|+||+
T Consensus        90 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  139 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFD  139 (326)
T ss_dssp             EEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCC
Confidence            999999999999999943  35689999999999999999999999999996

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.86  E-value=1.1e-21  Score=165.78  Aligned_cols=121  Identities=31%  Similarity=0.452  Sum_probs=106.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-EEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-QHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~  190 (235)
                      ..+.+.+.||+|+||.||++.+ .+..||||.++...  ..+.|.+|+.+++.++||||+++++++...+ ..++||||+
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~  269 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM  269 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred             HHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence            3455668899999999999988 57899999997543  4468999999999999999999999987654 789999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++.......+++..++.++.||+.||+|||+++|+||+
T Consensus       270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  314 (450)
T 1k9a_A          270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  314 (450)
T ss_dssp             TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            999999999765444579999999999999999999999999996

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.86  E-value=3e-22  Score=165.53  Aligned_cols=127  Identities=26%  Similarity=0.399  Sum_probs=110.0

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ++....+.+.+.||+|+||.||+|... ++..||+|.+... .......|.+|+.+++.++||||+++++++...+..++
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            344456677889999999999999874 6889999998754 33344578899999999999999999999999889999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+++|+|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       190 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  238 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRD  238 (377)
T ss_dssp             EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcc
Confidence            99999999999999643 23589999999999999999999999999996

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.86  E-value=2.9e-21  Score=156.35  Aligned_cols=124  Identities=19%  Similarity=0.265  Sum_probs=103.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--------  181 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------  181 (235)
                      .+|.+.+.||+|+||.||++... ++..||+|.+... .....+.+.+|+.+++.++||||+++++.+...+        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45667789999999999999764 7889999999754 3345567999999999999999999999885543        


Q ss_pred             -------------------------------------------------EEEEEEEcccCCChhhhhhcCC-CCCCCHHH
Q 026630          182 -------------------------------------------------QHMLVYVFMSKGSLASHLYDEN-YGPLTWNL  211 (235)
Q Consensus       182 -------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~  211 (235)
                                                                       ..+++|||+++|+|.+++.... ....++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             3799999999999999996532 23356667


Q ss_pred             HHHHHHHHHHHHHHHhcCCccccC
Q 026630          212 RVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       212 ~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..++.||+.||+|||++||+||+
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~D  189 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRD  189 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecC
Confidence            899999999999999999999996

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.86  E-value=2e-21  Score=153.22  Aligned_cols=122  Identities=30%  Similarity=0.480  Sum_probs=108.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .++.+.+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..+++|||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            4556778999999999999988788899999997543 234578999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus        89 ~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  131 (269)
T 4hcu_A           89 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  131 (269)
T ss_dssp             TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99999999543 35689999999999999999999999999996

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.86  E-value=1.2e-21  Score=160.48  Aligned_cols=127  Identities=21%  Similarity=0.319  Sum_probs=109.3

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      +....|.+.+.||+|+||.||++.. .++..||+|.+...     .....+.+.+|+.+++.++||||+++++.+.+.+.
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            3456778889999999999999965 46889999998643     12245678999999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++|+|.+++...  ....+++..+..++.||+.||+|||+++|+||+
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrD  155 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD  155 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            99999999999998887532  234589999999999999999999999999996

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=7e-22  Score=156.85  Aligned_cols=125  Identities=25%  Similarity=0.380  Sum_probs=106.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +...++.+.+.||+|+||.||++...++..||+|.+.... ...+.+.+|+.++..++||||+++++++.+.+..+++||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            4445667788999999999999998778899999997543 234578999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++... ...+++.++..++.|++.||+|||+++|+||+
T Consensus       100 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  145 (283)
T 3gen_A          100 YMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD  145 (283)
T ss_dssp             CCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             ccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            99999999999642 34589999999999999999999999999996

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.86  E-value=4.1e-22  Score=158.60  Aligned_cols=125  Identities=23%  Similarity=0.392  Sum_probs=108.8

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC-C-------CEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST-G-------ETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG  181 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  181 (235)
                      ...++.+.+.||+|+||.||++.... +       ..+++|.+........+.+.+|+.+++.++||||+++++++.+.+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            34456778899999999999996432 2       469999997666666778999999999999999999999999998


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++|||+++|+|.+++.... ..+++..+..++.||+.||+|||+++|+||+
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  138 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGN  138 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCC
Confidence            9999999999999999996542 3489999999999999999999999999996

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=3.3e-21  Score=159.78  Aligned_cols=122  Identities=24%  Similarity=0.352  Sum_probs=108.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.+++.++||||+++++.+.+....++||||++
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  131 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  131 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence            466778999999999999965 4678999999987655556678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus       132 gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  174 (387)
T 1kob_A          132 GGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLD  174 (387)
T ss_dssp             CCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            99999999543 34689999999999999999999999999996

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.86  E-value=2.7e-22  Score=169.62  Aligned_cols=127  Identities=27%  Similarity=0.385  Sum_probs=109.8

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +++....+.+.+.||+|+||.||+|.+..+..||+|.+.... ...+.|.+|+.+++.++||||+++++++.+ +..++|
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            345556677788999999999999998777789999997543 335689999999999999999999999876 668999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  305 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  305 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999999999999643334589999999999999999999999999996

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.86  E-value=2.1e-21  Score=158.07  Aligned_cols=121  Identities=25%  Similarity=0.294  Sum_probs=106.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E   85 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence            456678999999999999975 46889999999754   23345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        86 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  130 (337)
T 1o6l_A           86 YANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRD  130 (337)
T ss_dssp             CCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence            99999999998543  4589999999999999999999999999996

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.86  E-value=6.2e-22  Score=159.42  Aligned_cols=126  Identities=33%  Similarity=0.486  Sum_probs=109.0

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +...++.+.+.||+|+||.||++.. .+..+|+|.+...  .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3445567778999999999999987 6889999998755  334456789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          187 YVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      |||+++|+|.+++.... ...+++..+..++.||+.||+|||++|  |+||+
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~D  164 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRN  164 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTT
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCC
Confidence            99999999999996432 123899999999999999999999999  99996

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.86  E-value=3.1e-21  Score=154.18  Aligned_cols=122  Identities=22%  Similarity=0.325  Sum_probs=107.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+|.+.+.||+|+||.||++.. ..+..+|+|.+...   .....+.+.+|+..+..++||||+++++++...+..+++|
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            4566778999999999999974 46889999998643   3344567899999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++...  .++++..+..++.|++.||+|||++||+||+
T Consensus        91 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D  136 (294)
T 4eqm_A           91 EYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRD  136 (294)
T ss_dssp             ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999999999543  4689999999999999999999999999996

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.86  E-value=6.7e-22  Score=162.88  Aligned_cols=128  Identities=29%  Similarity=0.461  Sum_probs=109.7

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++....+.+.+.||+|+||.||++.+.      .+..||+|.++.. .......+.+|+.+++.++||||+++++++.+.
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  146 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  146 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            444566778899999999999999742      3558999999654 444556789999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN-----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...++||||+++|+|.+++....     ...+++.+++.++.||+.||+|||++||+||+
T Consensus       147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  206 (367)
T 3l9p_A          147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRD  206 (367)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            88999999999999999996422     24589999999999999999999999999996

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.86  E-value=1.6e-21  Score=158.00  Aligned_cols=121  Identities=23%  Similarity=0.265  Sum_probs=103.9

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..+++|||+
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   87 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence            4566789999999999999754 68899999986542 233456889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++..  ...+++..+..++.||+.||+|||++||+||+
T Consensus        88 ~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~givH~D  130 (323)
T 3tki_A           88 SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  130 (323)
T ss_dssp             TTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            99999999943  35689999999999999999999999999996

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=1.3e-21  Score=160.40  Aligned_cols=126  Identities=25%  Similarity=0.311  Sum_probs=106.9

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  182 (235)
                      .+...++.+.+.||+|+||.||++.. .++..+|+|.+...   .......+..|..++..+ +||||+++++++.+.+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            34445667789999999999999975 45889999999754   233445678899999887 79999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrD  149 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRD  149 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence            99999999999999999653  4589999999999999999999999999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.86  E-value=1.2e-21  Score=162.26  Aligned_cols=131  Identities=29%  Similarity=0.441  Sum_probs=112.0

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeC--------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCcccee
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMS--------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLV  174 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~  174 (235)
                      ..+++...++.+.+.||+|+||.||++...        .+..||+|.+... .......+.+|+.+++.+ +||||++++
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~  141 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL  141 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence            344566677888899999999999999742        2347999999765 444556789999999999 999999999


Q ss_pred             eEEEeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          175 GYCAEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       175 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++...+..++||||+++|+|.+++....              ...+++.++..++.||+.||+|||+++|+||+
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  216 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD  216 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            99999999999999999999999996533              23589999999999999999999999999996

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.86  E-value=6.1e-22  Score=158.18  Aligned_cols=126  Identities=26%  Similarity=0.450  Sum_probs=109.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CC
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KG  181 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~  181 (235)
                      +...++.+.+.||+|+||.||++.+     .++..||+|.+........+.+.+|+.+++.++||||+++++++..  ..
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            3445667789999999999999974     3577999999987766667789999999999999999999999854  35


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++|+||+
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  139 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD  139 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            6899999999999999996542 4589999999999999999999999999996

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.86  E-value=3.8e-21  Score=158.68  Aligned_cols=118  Identities=27%  Similarity=0.411  Sum_probs=101.2

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            46799999999999975 46889999999876666667899999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  212 (373)
T 2x4f_A          174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLD  212 (373)
T ss_dssp             HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            9988643 24589999999999999999999999999996

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.86  E-value=8.9e-22  Score=156.56  Aligned_cols=130  Identities=25%  Similarity=0.404  Sum_probs=113.6

Q ss_pred             CHHHHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       105 ~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ..+++...++.+.+.||+|+||.||++... .+..+|+|.+... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            334556667778899999999999999764 4778999998654 33456789999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++.......+++..+..++.|++.||+|||+++++||+
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  136 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD  136 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSC
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            9999999999999999776666799999999999999999999999999996

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.85  E-value=2.9e-22  Score=172.67  Aligned_cols=127  Identities=27%  Similarity=0.385  Sum_probs=109.8

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +++....+.+.+.||+|+||.||++.+..+..||||.+.... ...+.|.+|+.+|+.++||||+++++++.+ +..++|
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv  339 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  339 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence            345556677788999999999999998777789999997553 335689999999999999999999999876 668999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++.......+++.+++.++.||+.||+|||+++|+||+
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrD  388 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  388 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999999999999643334589999999999999999999999999996

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.85  E-value=2.7e-21  Score=157.47  Aligned_cols=126  Identities=31%  Similarity=0.490  Sum_probs=108.6

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ....+.+.+.||+|+||.||++...      ++..||+|.+... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            3455667789999999999999763      3478999999765 34445679999999999999999999999999899


Q ss_pred             EEEEEEcccCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDEN----------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|||+++|+|.+++....                      ...+++.++..++.||+.||+|||++||+||+
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            999999999999999996532                      15689999999999999999999999999996

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=4.5e-21  Score=155.17  Aligned_cols=121  Identities=19%  Similarity=0.253  Sum_probs=105.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+.... .....+.+|+.+++.++||||+++++.+.+.+..+++|||++
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            456678899999999999975 357789999986543 344568899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++.++..++.||+.||+|||++||+||+
T Consensus        85 g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~D  127 (321)
T 1tki_A           85 GLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFD  127 (321)
T ss_dssp             CCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence            99999999543 34689999999999999999999999999996

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.85  E-value=3.6e-21  Score=155.53  Aligned_cols=121  Identities=21%  Similarity=0.283  Sum_probs=106.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++.. .+++.+|+|.+...   .....+.+.+|..+++.++||||+++++.+.+....+++||
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e   86 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   86 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence            456678999999999999975 46889999999754   22345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        87 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  131 (318)
T 1fot_A           87 YIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRD  131 (318)
T ss_dssp             CCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99999999999653  4589999999999999999999999999996

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.85  E-value=4.2e-21  Score=155.06  Aligned_cols=123  Identities=25%  Similarity=0.311  Sum_probs=105.4

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--EEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--QHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++....  ..++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence            3566788999999999999764 48899999997542 344567889999999999999999999987654  7899999


Q ss_pred             cccCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++.... ...+++..+..++.||+.||+|||++||+||+
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  137 (319)
T 4euu_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN  137 (319)
T ss_dssp             CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            999999999996532 23489999999999999999999999999996

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.85  E-value=6.7e-21  Score=156.58  Aligned_cols=120  Identities=23%  Similarity=0.317  Sum_probs=106.1

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+..... ..+.+.+|+..++.++||||+++++++.+.+..++||||++
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   99 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS   99 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence            4567789999999999999754 688999999975432 23568899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus       100 ~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~D  141 (361)
T 3uc3_A          100 GGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRD  141 (361)
T ss_dssp             SCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999998543  4589999999999999999999999999996

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.85  E-value=4.8e-21  Score=152.00  Aligned_cols=125  Identities=24%  Similarity=0.312  Sum_probs=109.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ...|.+.+.||+|+||.||++... ++..||+|.+...  .......+.+|+..+..+ +||||+++++++.+.+..+++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            456777899999999999999764 6899999999754  334456788999999988 999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++....  ...+++..+..++.||+.||+|||+++|+||+
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  140 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMD  140 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecC
Confidence            99999999999996421  25589999999999999999999999999996

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.85  E-value=2.8e-21  Score=159.90  Aligned_cols=122  Identities=21%  Similarity=0.268  Sum_probs=107.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..|.+.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            4566778999999999999975 45789999998653   2334567889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        95 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrD  140 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRD  140 (384)
T ss_dssp             CCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            999999999999543  5699999999999999999999999999996

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.85  E-value=6e-21  Score=150.98  Aligned_cols=123  Identities=20%  Similarity=0.241  Sum_probs=109.3

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...|.+.+.||+|+||.||++... ++..+++|.+........+.+.+|+.+++.++||||+++++.+.+.+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            345777889999999999999753 4678999999876555667899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.|++.||+|||++|++||+
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  131 (277)
T 3f3z_A           88 CTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRD  131 (277)
T ss_dssp             CCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            9999999988543  4589999999999999999999999999996

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=3.2e-21  Score=154.33  Aligned_cols=126  Identities=27%  Similarity=0.445  Sum_probs=105.4

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC--
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK--  180 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--  180 (235)
                      +....+.+.+.||+|+||.||++.+     .++..||+|.+... .......+.+|+.+++.++||||+++++++...  
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG   97 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence            3344567778999999999999983     35789999999754 344556889999999999999999999999776  


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+++|||+++|+|.+++.... ..+++..+..++.|++.||+|||+++|+||+
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  151 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRD  151 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Confidence            66899999999999999995432 4589999999999999999999999999996

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.85  E-value=2e-21  Score=158.00  Aligned_cols=129  Identities=28%  Similarity=0.477  Sum_probs=109.2

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe--------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGY  176 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~  176 (235)
                      .++...++.+.+.||+|+||.||++..        .++..||+|.+... .......+.+|+.+++.+ +||||++++++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  109 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  109 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence            345566778889999999999999975        24678999999765 344566789999999999 99999999999


Q ss_pred             EEeCCEEEEEEEcccCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAEKGQHMLVYVFMSKGSLASHLYDENY--------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +...+..++||||+++|+|.+++.....              ..+++..+..++.||+.||+|||+++|+||+
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  182 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRD  182 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999999999999999999999965321              2488999999999999999999999999996

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.85  E-value=1.1e-21  Score=154.60  Aligned_cols=124  Identities=25%  Similarity=0.353  Sum_probs=108.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ...++.+.+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.++..++||||+++++++.+.+..+++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            345567788999999999999988777789999997543 2345789999999999999999999999998999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus        85 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  129 (268)
T 3sxs_A           85 ISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRD  129 (268)
T ss_dssp             CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999999999653 24589999999999999999999999999996

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=5.1e-21  Score=161.24  Aligned_cols=124  Identities=19%  Similarity=0.262  Sum_probs=107.5

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ....|.+.+.||+|+||.||++.. .++..+|+|.+....  ....+.+.+|+.+++.++||||+++++.+.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            345677889999999999999964 568899999997653  33455789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+.+...  ..+++.++..++.||+.||+|||++||+||+
T Consensus        89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrD  135 (444)
T 3soa_A           89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRN  135 (444)
T ss_dssp             ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999654  4589999999999999999999999999996

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.85  E-value=1.5e-21  Score=157.09  Aligned_cols=128  Identities=26%  Similarity=0.436  Sum_probs=109.5

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++....+.+.+.||+|+||.||++..      .++..||+|.+... .....+.+.+|+.+++.++||||+++++++...
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            34455667788999999999999964      23478999999765 445567889999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENY----------------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+++|+|.+++.....                      ..+++.++..++.||+.||+|||+++|+||+
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            899999999999999999965322                      2478899999999999999999999999996

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=4.7e-21  Score=154.35  Aligned_cols=122  Identities=28%  Similarity=0.323  Sum_probs=104.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+|.+.+.||+|+||.||++...++..+|+|.+...  .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            345667889999999999998878999999999754  223346788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++ +|.+++... ...+++..+..++.|++.||+|||++||+||+
T Consensus       101 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~D  144 (311)
T 3niz_A          101 MEK-DLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRD  144 (311)
T ss_dssp             CSE-EHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCC-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            985 888888543 35689999999999999999999999999996

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.85  E-value=2.3e-21  Score=155.91  Aligned_cols=129  Identities=26%  Similarity=0.412  Sum_probs=110.6

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      .++...++.+.+.||+|+||.||++..      .++..||+|.+... .....+.+.+|+.++..+ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            345556677889999999999999974      24568999999755 334456799999999999 9999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDENY----------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+..+++|||+++|+|.+++.....                ..+++..+..++.||+.||+|||+++++||+
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  170 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD  170 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            99999999999999999999965432                2489999999999999999999999999996

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.85  E-value=1.5e-20  Score=151.38  Aligned_cols=116  Identities=26%  Similarity=0.348  Sum_probs=104.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      +.||+|+||.||++.. .++..||+|.+..........+.+|+.++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI   98 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence            6799999999999974 46889999999876555667889999999885 899999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        99 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  136 (316)
T 2ac3_A           99 LSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRD  136 (316)
T ss_dssp             HHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCC
Confidence            9999653  4589999999999999999999999999996

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.85  E-value=5.4e-21  Score=156.49  Aligned_cols=121  Identities=21%  Similarity=0.233  Sum_probs=106.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++.. .++..+|+|.+...   .....+.+.+|+.++..++||||+++++.+.+.+..++|||
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  121 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence            455678899999999999975 46889999999654   22345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       122 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  166 (350)
T 1rdq_E          122 YVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD  166 (350)
T ss_dssp             CCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            99999999999653  4589999999999999999999999999996

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.85  E-value=7e-21  Score=151.40  Aligned_cols=124  Identities=20%  Similarity=0.293  Sum_probs=108.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ..|.+.+.||+|+||.||++.. .++..+++|.+... .....+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4677789999999999999975 46789999998765 344567889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++...  ....+++..+..++.|++.||+|||++||+||+
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~d  149 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKD  149 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECC
Confidence            9999999988532  235689999999999999999999999999996

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.85  E-value=1.8e-21  Score=157.89  Aligned_cols=123  Identities=21%  Similarity=0.313  Sum_probs=102.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecCC----hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDS----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ...|.+.+.||+|+||.||++..    .++..+|+|.+....    ......+.+|+.+++.++||||+++++.+...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            34567789999999999999975    478899999997542    2334567889999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~D  146 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRD  146 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEccc
Confidence            99999999999999999543  4588999999999999999999999999996

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.84  E-value=7.4e-21  Score=161.40  Aligned_cols=121  Identities=21%  Similarity=0.312  Sum_probs=106.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+....   ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E   96 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME   96 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            456678899999999999975 478999999997542   2234578899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++..  ...+++..+..++.||+.||+|||++||+||+
T Consensus        97 ~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  141 (476)
T 2y94_A           97 YVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHMVVHRD  141 (476)
T ss_dssp             CCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Confidence            9999999999953  35699999999999999999999999999996

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.84  E-value=6.7e-21  Score=151.72  Aligned_cols=120  Identities=28%  Similarity=0.341  Sum_probs=105.2

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++....+..+|+|.+....  ......+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence            45678899999999999988778999999986542  2334678899999999999999999999999999999999998


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        84 ~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  125 (288)
T 1ob3_A           84 Q-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD  125 (288)
T ss_dssp             E-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             C-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            6 999988543 35689999999999999999999999999996

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.84  E-value=8e-21  Score=161.96  Aligned_cols=125  Identities=23%  Similarity=0.337  Sum_probs=110.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      -...+|.+.+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++++.+....++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            3456788889999999999999975 46889999998643  23345678999999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||+++|+|.+.+...  ..+++..+..++.||+.||.|||++||+||+
T Consensus        99 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  146 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRD  146 (486)
T ss_dssp             EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            99999999999988543  4589999999999999999999999999996

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.84  E-value=1.4e-21  Score=160.17  Aligned_cols=129  Identities=29%  Similarity=0.475  Sum_probs=107.9

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      +++...++.+.+.||+|+||.||++.+      .++..||+|.+... .....+.+.+|+.++..+ +||||+++++++.
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~   96 (359)
T 3vhe_A           17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   96 (359)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence            445566777889999999999999963      23468999999765 344456799999999999 8999999999987


Q ss_pred             eCC-EEEEEEEcccCCChhhhhhcCCC-----------------------------------------------------
Q 026630          179 EKG-QHMLVYVFMSKGSLASHLYDENY-----------------------------------------------------  204 (235)
Q Consensus       179 ~~~-~~~lv~e~~~~g~L~~~l~~~~~-----------------------------------------------------  204 (235)
                      ..+ ..+++|||+++|+|.+++.....                                                     
T Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (359)
T 3vhe_A           97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV  176 (359)
T ss_dssp             STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence            754 58999999999999999965321                                                     


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          205 -----------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       205 -----------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                 ..+++..+..++.||+.||+|||+++|+||+
T Consensus       177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~D  218 (359)
T 3vhe_A          177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD  218 (359)
T ss_dssp             -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence                       1288899999999999999999999999996

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=7e-21  Score=164.28  Aligned_cols=122  Identities=27%  Similarity=0.340  Sum_probs=107.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +.+.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.++..++||||+++++.+.+.+..++||||
T Consensus       186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy  265 (576)
T 2acx_A          186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL  265 (576)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence            44557899999999999975 46899999999653   223445688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++.......+++..+..++.||+.||+|||++||+||+
T Consensus       266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrD  311 (576)
T 2acx_A          266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD  311 (576)
T ss_dssp             CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence            9999999999765445699999999999999999999999999996

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.84  E-value=9.3e-21  Score=154.82  Aligned_cols=121  Identities=20%  Similarity=0.288  Sum_probs=105.7

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+.+.+.||+|+||.||++... +++.+|+|.+...   .......+.+|..++..+ +||||+++++++.+.+..++||
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~   89 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   89 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence            4566789999999999999764 5789999999754   333445678899999887 8999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        90 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  135 (345)
T 3a8x_A           90 EYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRD  135 (345)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            999999999999643  4589999999999999999999999999996

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.84  E-value=1.6e-20  Score=150.53  Aligned_cols=123  Identities=24%  Similarity=0.380  Sum_probs=106.2

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ..+|.+.+.||+|+||.||++.. .+++.+|+|.+..........+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            45677889999999999999975 36889999999866444456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.|++.||+|||++|++||+
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  131 (304)
T 2jam_A           88 VSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRD  131 (304)
T ss_dssp             CCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred             CCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999998543  4589999999999999999999999999996

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.3e-21  Score=158.09  Aligned_cols=128  Identities=28%  Similarity=0.482  Sum_probs=106.5

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ++....+.+.+.||+|+||.||++..      ..+..||+|.+... .....+.+.+|+.++..+ +||||+++++++..
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            44556677889999999999999974      23457999999754 334456789999999999 99999999999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENY---------------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+..+++|||+++|+|.+++.....                     ..+++..+..++.||+.||+|||++||+||+
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999999999999999999965321                     2378999999999999999999999999996

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.84  E-value=3.1e-21  Score=160.90  Aligned_cols=120  Identities=19%  Similarity=0.199  Sum_probs=103.6

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++... ++..+|+|.+...   .......+.+|..++..++||||+++++++.+....++|||
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E  149 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME  149 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            3455678999999999999754 5789999999653   11223357889999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus       150 ~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrD  193 (410)
T 3v8s_A          150 YMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRD  193 (410)
T ss_dssp             CCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            9999999999954   3489999999999999999999999999996

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.84  E-value=5.4e-21  Score=154.74  Aligned_cols=132  Identities=42%  Similarity=0.701  Sum_probs=109.6

Q ss_pred             cCHHHHHH--HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          104 YSYKDLQK--ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       104 ~~~~~l~~--~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      +...++..  ..|.+.+.||+|+||.||++...++..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   99 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP   99 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence            34444443  3445568899999999999987788999999987542 22333689999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDG---VSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~---~ivHr~  235 (235)
                      +..+++|||+++|+|.+++....  ...+++..+..++.|++.||+|||++   +|+||+
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~D  159 (326)
T 3uim_A          100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD  159 (326)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCC
T ss_pred             CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCC
Confidence            89999999999999999996532  34589999999999999999999999   999996

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.84  E-value=2.1e-20  Score=147.60  Aligned_cols=123  Identities=23%  Similarity=0.260  Sum_probs=108.2

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ..+|.+.+.||+|+||.||++... ++..+++|.+... .....+.+.+|+.+++.++||||+++++++...+..++++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            356677889999999999999754 6889999998754 33445678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++..  ...+++..+..++.|++.||+|||++|++||+
T Consensus        86 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  130 (276)
T 2yex_A           86 YCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  130 (276)
T ss_dssp             CCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9999999999843  35689999999999999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.84  E-value=2e-20  Score=148.37  Aligned_cols=123  Identities=24%  Similarity=0.363  Sum_probs=108.4

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...|.+.+.||+|+||.||++... ++..+++|.+.....      ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            456778899999999999999764 688999999875421      2356899999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++...  ..+++..+..++.||+.||+|||+++++||+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  133 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFD  133 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999999999999999543  4589999999999999999999999999996

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.84  E-value=4.1e-21  Score=156.86  Aligned_cols=125  Identities=21%  Similarity=0.296  Sum_probs=106.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  183 (235)
                      +....+.+.+.||+|+||.||++.. .+++.+|+|.+....   ......+..|..++..+ +||||+++++.+.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            3344566778999999999999976 457899999997541   23445677888888876 999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        94 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  143 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRD  143 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            9999999999999999643  4589999999999999999999999999996

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=1e-20  Score=148.70  Aligned_cols=122  Identities=30%  Similarity=0.460  Sum_probs=108.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .++.+.+.||+|+||.||++...++..+++|.+..... ..+.+.+|+.+++.++||||+++++++.+.+..+++|||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            34566788999999999999887788999999975532 34678999999999999999999999999889999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|.+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus        87 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  129 (267)
T 3t9t_A           87 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  129 (267)
T ss_dssp             TCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             CCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999654 34689999999999999999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.84  E-value=4e-21  Score=157.20  Aligned_cols=120  Identities=23%  Similarity=0.313  Sum_probs=99.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..|.+.+.||+|+||.||++... ++..||+|.+....  ..+.+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            34667789999999999999764 57889999997543  2346789999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus       131 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  173 (349)
T 2w4o_A          131 TGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRD  173 (349)
T ss_dssp             CSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            999999999543  5689999999999999999999999999996

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.84  E-value=4.2e-21  Score=161.34  Aligned_cols=122  Identities=18%  Similarity=0.192  Sum_probs=105.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++... ++..+|+|.+....   ......+..|..++..++||||+++++.+.+.+..++|||
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E  154 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD  154 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence            4556788999999999999764 46789999997531   1222347889999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++... ...+++..+..++.||+.||+|||+++||||+
T Consensus       155 y~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrD  200 (437)
T 4aw2_A          155 YYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD  200 (437)
T ss_dssp             CCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            99999999999652 35699999999999999999999999999996

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.84  E-value=1.4e-20  Score=152.19  Aligned_cols=123  Identities=23%  Similarity=0.340  Sum_probs=108.6

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...|.+.+.||+|+||.||++.. .++..+|+|.+.....      ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            45677889999999999999975 4688999999975422      1356789999999999999999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~d  140 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999543  5689999999999999999999999999996

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.84  E-value=1.8e-20  Score=159.72  Aligned_cols=125  Identities=26%  Similarity=0.376  Sum_probs=110.6

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ....+|.+.+.||+|+||.||++.. .++..+|+|.+....   ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            3456778889999999999999975 478899999996542   345668999999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       103 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  151 (484)
T 3nyv_A          103 LVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRD  151 (484)
T ss_dssp             EEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            999999999999998543  5689999999999999999999999999996

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.84  E-value=1e-20  Score=151.35  Aligned_cols=120  Identities=24%  Similarity=0.347  Sum_probs=99.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh--------------------------hcHHHHHHHHHHHccC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK--------------------------QGEKEFQTEVMLLGRL  165 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~~l  165 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+.....                          ...+.+.+|+.+++.+
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            456778999999999999965 4678999999865421                          1134688999999999


Q ss_pred             CCCCccceeeEEEe--CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          166 HHRNLVNLVGYCAE--KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       166 ~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++++++.+  .+..+++|||+++++|.+++.   ...+++.++..++.||+.||+|||+++|+||+
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  162 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRD  162 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99999999999976  568899999999999988762   34689999999999999999999999999996

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.84  E-value=1.7e-20  Score=148.43  Aligned_cols=122  Identities=25%  Similarity=0.393  Sum_probs=106.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE   91 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence            456678899999999999975 578899999996542   2234678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus        92 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  137 (278)
T 3cok_A           92 MCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRD  137 (278)
T ss_dssp             CCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSS
T ss_pred             cCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            99999999999643 35689999999999999999999999999996

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=8.7e-21  Score=157.74  Aligned_cols=123  Identities=25%  Similarity=0.311  Sum_probs=105.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--EEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--QHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+  ..++|||
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e   89 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred             ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence            4566788999999999999764 58899999997542 334567889999999999999999999987654  7799999


Q ss_pred             cccCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++.... ...+++..+..++.||+.||+|||++||+||+
T Consensus        90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  137 (396)
T 4eut_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN  137 (396)
T ss_dssp             CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECC
Confidence            999999999995432 23389999999999999999999999999996

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.84  E-value=1.5e-20  Score=151.56  Aligned_cols=124  Identities=26%  Similarity=0.361  Sum_probs=106.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv  186 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++++..    ....+++
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  108 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL  108 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence            4566778999999999999975 5788999999977666667789999999999999999999999863    3478899


Q ss_pred             EEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++..  .....+++..+..++.||+.||+|||+++|+||+
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~d  159 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRD  159 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999864  2345689999999999999999999999999996

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.84  E-value=1.8e-20  Score=160.12  Aligned_cols=124  Identities=23%  Similarity=0.276  Sum_probs=105.0

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ....|.+.+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.+++.++||||+++++++.+....++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            345677889999999999999975 46789999999754  233456789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       115 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  161 (494)
T 3lij_A          115 MECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD  161 (494)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            9999999999988543  4589999999999999999999999999996

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.84  E-value=5e-21  Score=155.13  Aligned_cols=128  Identities=28%  Similarity=0.456  Sum_probs=107.2

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++...+|.+.+.||+|+||.||++..      ..+..||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            44556677889999999999999973      24678999999754 444556789999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENY-----GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+++|||+++|+|.+++.....     ..+++..+..++.||+.||+|||++||+||+
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~d  165 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRD  165 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCc
Confidence            889999999999999999965321     3488999999999999999999999999996

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.84  E-value=8.2e-21  Score=157.65  Aligned_cols=122  Identities=19%  Similarity=0.284  Sum_probs=103.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.+.+.||+|+||.||++... ++..+|+|.+...   .......+..|..++..+ +||||+++++++.+.+..++|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            34667789999999999999754 5678999999754   222334577888888876 899999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|..++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       132 ~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrD  178 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRD  178 (396)
T ss_dssp             EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence            9999999999999653  4589999999999999999999999999996

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.84  E-value=5.6e-21  Score=155.45  Aligned_cols=123  Identities=18%  Similarity=0.252  Sum_probs=107.6

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ..+|.+.+.||+|+||.||++... ++..+++|.+...   .....+.+.+|+.+++.++||||+++++++.+.+..+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            345667789999999999999753 5788999998754   334456789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++...  ..+++.++..++.||+.||+|||++||+||+
T Consensus       120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d  166 (335)
T 2owb_A          120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD  166 (335)
T ss_dssp             ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecC
Confidence            9999999999998543  4589999999999999999999999999996

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.84  E-value=1.7e-20  Score=151.45  Aligned_cols=122  Identities=25%  Similarity=0.336  Sum_probs=94.2

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+... .......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence            456678899999999999975 46889999999755 3334467889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDE----NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~----~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + |+|.+++...    ....+++..+..++.||+.||+|||++||+||+
T Consensus        86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~D  133 (317)
T 2pmi_A           86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRD  133 (317)
T ss_dssp             C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            8 5999988532    224589999999999999999999999999996

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.84  E-value=3.1e-20  Score=150.56  Aligned_cols=132  Identities=20%  Similarity=0.256  Sum_probs=111.6

Q ss_pred             cCHHHHHHHHhhhh-hccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          104 YSYKDLQKATCNFT-TLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       104 ~~~~~l~~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      +...+.....+.+. +.||+|+||.||++.. .++..||+|.+...  .......+.+|+.++..+ +||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            33345555566565 7899999999999975 36889999998754  334466889999999998 5799999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+..++||||+++|+|.+++.......+++..+..++.|++.||+|||++||+||+
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~D  156 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLD  156 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence            999999999999999999999665556799999999999999999999999999996

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.83  E-value=3.7e-20  Score=148.54  Aligned_cols=133  Identities=35%  Similarity=0.644  Sum_probs=113.5

Q ss_pred             CccCHHHHHHHHhhhh--------hccCCCCceeEEEEEeCCCCEEEEEEeecC----ChhcHHHHHHHHHHHccCCCCC
Q 026630          102 PEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHHRN  169 (235)
Q Consensus       102 ~~~~~~~l~~~~~~~~--------~~lg~G~~g~v~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~n  169 (235)
                      ..+.+.++......+.        +.||+|+||.||++.. ++..+++|.+...    .....+.+.+|+.+++.++|||
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   91 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN   91 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence            4567777777765553        5699999999999987 6889999998643    2334567899999999999999


Q ss_pred             ccceeeEEEeCCEEEEEEEcccCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       170 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++++...+..+++|||+++|+|.+++... ...++++..+..++.||+.||+|||++|++||+
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  158 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD  158 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence            999999999988999999999999999998532 235689999999999999999999999999996

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.83  E-value=6.2e-21  Score=159.23  Aligned_cols=122  Identities=19%  Similarity=0.186  Sum_probs=105.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+.+.+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|..++..++||||+++++.+.+.+..++|||
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE  141 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME  141 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEc
Confidence            455668899999999999976 46899999999753   12233457889999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       142 ~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrD  187 (412)
T 2vd5_A          142 YYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRD  187 (412)
T ss_dssp             CCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999999999642 23589999999999999999999999999996

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.83  E-value=2e-20  Score=149.21  Aligned_cols=120  Identities=26%  Similarity=0.344  Sum_probs=103.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            55678899999999999975 46789999999755  3333467889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++ ++.+++... ...+++..+..++.|++.||+|||++||+||+
T Consensus        84 ~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~d  126 (292)
T 3o0g_A           84 DQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD  126 (292)
T ss_dssp             SE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            76 666666443 35699999999999999999999999999996

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.83  E-value=2.9e-21  Score=152.95  Aligned_cols=126  Identities=25%  Similarity=0.380  Sum_probs=107.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ++...++.+.+.||+|+||.||++...++..+++|.+.... ...+.+.+|+.+++.++||||+++++++.+ +..+++|
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~   86 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence            34445677788999999999999998777899999986543 345678999999999999999999998864 4578999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.......+++..+..++.|++.||+|||++|++||+
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  134 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD  134 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            999999999999543223589999999999999999999999999996

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.83  E-value=2e-20  Score=149.65  Aligned_cols=123  Identities=25%  Similarity=0.369  Sum_probs=105.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..|.+.+.||+|+||.||++... ++..+++|.+........+.+.+|+.+++.++||||+++++.+...+..+++|||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            44567788999999999999764 57899999997666666778999999999999999999999999989999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++... ...+++..+..++.||+.||+|||++|++||+
T Consensus        99 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  142 (302)
T 2j7t_A           99 PGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD  142 (302)
T ss_dssp             TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            999999988542 24589999999999999999999999999996

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.83  E-value=4.7e-21  Score=154.24  Aligned_cols=121  Identities=21%  Similarity=0.265  Sum_probs=103.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC----EEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~  184 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...   .......+.+|+..+..++||||+++++.+....    ..+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            456778999999999999975 56789999999765   2333457889999999999999999999986543    348


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++++|.+++...  ..+++..+..++.|++.||+|||+++|+||+
T Consensus        93 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  141 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRD  141 (311)
T ss_dssp             EEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence            999999999999999643  4689999999999999999999999999996

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.83  E-value=1.8e-20  Score=148.56  Aligned_cols=125  Identities=23%  Similarity=0.343  Sum_probs=107.3

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe------
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE------  179 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------  179 (235)
                      ++.....|.+.+.||+|+||.||++... ++..+++|.+.....    .+.+|+.++..++||||+++++++..      
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPE   81 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence            4556667788899999999999999764 689999999975532    46789999999999999999998754      


Q ss_pred             ----------CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 ----------KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                                ....+++|||+++|+|.+++.......+++..+..++.||+.||.|||++||+||+
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  147 (284)
T 2a19_B           82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRD  147 (284)
T ss_dssp             -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence                      34578999999999999999654445689999999999999999999999999996

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.83  E-value=4.2e-20  Score=149.74  Aligned_cols=113  Identities=20%  Similarity=0.251  Sum_probs=101.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      +.||+|+||.||++.. .++..+|+|.+...   ....+.+|+..+..+. ||||+++++++.+....++||||+++|+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            6799999999999975 46889999999643   3456788999999996 99999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        94 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D  131 (325)
T 3kn6_A           94 FERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRD  131 (325)
T ss_dssp             HHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Confidence            9999654  5699999999999999999999999999996

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.83  E-value=1.2e-20  Score=154.03  Aligned_cols=123  Identities=15%  Similarity=0.252  Sum_probs=107.8

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChh---c--------------HHHHHHHHHHHccCCCCCcccee
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQ---G--------------EKEFQTEVMLLGRLHHRNLVNLV  174 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~---~--------------~~~~~~e~~~l~~l~h~niv~~~  174 (235)
                      .+|.+.+.||+|+||.||++.. ++..||+|.+......   .              .+.+.+|+.++..++||||++++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            3566778999999999999988 8999999998744111   1              16899999999999999999999


Q ss_pred             eEEEeCCEEEEEEEcccCCChhhh------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          175 GYCAEKGQHMLVYVFMSKGSLASH------LYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       175 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++...+..++||||+++|+|.++      +.......+++..+..++.||+.||+|||+ +|++||+
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~d  177 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD  177 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCC
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecC
Confidence            999999999999999999999999      644335679999999999999999999999 9999996

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.83  E-value=2.8e-20  Score=147.98  Aligned_cols=128  Identities=23%  Similarity=0.351  Sum_probs=112.2

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ..+....+|.+.+.||+|+||.||++... ++..+++|.+...  .......+.+|+.+++.++||||+++++.+...+.
T Consensus        16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence            34555677888899999999999999764 6889999998754  33456788999999999999999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++||+++++|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  146 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRD  146 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99999999999999988543  3589999999999999999999999999996

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.83  E-value=1.9e-20  Score=151.72  Aligned_cols=123  Identities=25%  Similarity=0.398  Sum_probs=107.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEE--eCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA--EKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~  184 (235)
                      ..+.+.+.||+|+||.||++.+     ..+..||+|.+........+.+.+|+.+++.++||||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4566778999999999999984     357789999998776666778999999999999999999999886  456789


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++++|.+++.... ..+++..+..++.|++.||+|||+++|+||+
T Consensus       103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  152 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRD  152 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999999999999996422 3589999999999999999999999999996

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.83  E-value=1.1e-20  Score=150.83  Aligned_cols=122  Identities=18%  Similarity=0.246  Sum_probs=106.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+|.+.+.||+|+||.||++... ++..+++|.+...   .....+.+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            44567789999999999999764 5788999998754   3344567889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++...  ..+++..+..++.|++.||+|||++|++||+
T Consensus        95 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  140 (294)
T 2rku_A           95 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD  140 (294)
T ss_dssp             ECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            999999999988543  4589999999999999999999999999996

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2.2e-20  Score=151.86  Aligned_cols=125  Identities=26%  Similarity=0.434  Sum_probs=106.9

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeCC-----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMST-----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ....+.+.+.||+|+||.||++....     +..||+|.+... .......+.+|+.+++.++||||+++++++...+..
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  121 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM  121 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence            33445567889999999999997532     235999999765 444556789999999999999999999999998999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus       122 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  172 (333)
T 1mqb_A          122 MIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRD  172 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999999999999999653 35689999999999999999999999999996

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.83  E-value=7.4e-21  Score=156.91  Aligned_cols=122  Identities=28%  Similarity=0.295  Sum_probs=97.1

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC---hhcHHHHHHHHHH-HccCCCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS---KQGEKEFQTEVML-LGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.+.+.||+|+||.||++... ++..+|+|.+....   ......+..|..+ ++.++||||+++++.+.+.+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            34677899999999999999754 57889999997542   2233456677766 5678999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       118 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrD  164 (373)
T 2r5t_A          118 LDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRD  164 (373)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            9999999999999643  4588999999999999999999999999996

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.83  E-value=3.6e-20  Score=149.60  Aligned_cols=118  Identities=28%  Similarity=0.409  Sum_probs=103.5

Q ss_pred             hhhhccCCCCceeEEEEEeC-----CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMS-----TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLV  186 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv  186 (235)
                      .+.+.||+|+||.||++.+.     ++..||+|.+... .....+.+.+|+.+++.++||||+++++++.+  ....+++
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            56788999999999988642     5778999999765 34456679999999999999999999999987  4678999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++...   .+++..+..++.|++.||+|||++||+||+
T Consensus       114 ~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~D  159 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRD  159 (318)
T ss_dssp             ECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999999999999543   489999999999999999999999999996

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.83  E-value=5.1e-20  Score=148.25  Aligned_cols=128  Identities=21%  Similarity=0.146  Sum_probs=106.9

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCC
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKG  181 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~  181 (235)
                      ..++...++.+.+.||+|+||.||++... +++.||||.+...  .......+..|+..+..+ +||||+++++++.+.+
T Consensus        51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            44666778888899999999999999764 6899999998654  233344556666665555 9999999999999999


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++|||+ +++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  182 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLD  182 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            999999999 66999888553 34699999999999999999999999999996

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=1.8e-20  Score=154.19  Aligned_cols=123  Identities=21%  Similarity=0.227  Sum_probs=102.7

Q ss_pred             HHHHhhhhhccCCCCceeEEEEE------eCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC---CCCccceeeEEEeC
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH---HRNLVNLVGYCAEK  180 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~  180 (235)
                      ....|.+.+.||+|+||.||++.      ...+..||+|.+....   ..++..|...+..++   |+||+.+++.+...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            33456667889999999999993      4567899999997553   335667777776665   99999999999999


Q ss_pred             CEEEEEEEcccCCChhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDE---NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..++||||+++|+|.+++...   ....+++..+..++.||+.||+|||+++||||+
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrD  197 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGD  197 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCC
Confidence            9999999999999999999631   235699999999999999999999999999996

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.83  E-value=1.8e-20  Score=153.48  Aligned_cols=125  Identities=23%  Similarity=0.274  Sum_probs=106.8

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~  183 (235)
                      +...++.+.+.||+|+||.||++... ++..+|+|.+...   .......+..|..++..+ +||||+++++.+.+.+..
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            33445677789999999999999764 4678999999754   223456788999999888 899999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        97 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrD  146 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD  146 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence            9999999999999999643  4589999999999999999999999999996

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.83  E-value=1.3e-20  Score=152.90  Aligned_cols=121  Identities=23%  Similarity=0.332  Sum_probs=102.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+....  ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  113 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE  113 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence            3567778999999999999964 467899999997542  2234567899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++ +|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       114 ~~~~-~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~D  157 (329)
T 3gbz_A          114 YAEN-DLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRD  157 (329)
T ss_dssp             CCSE-EHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCC
Confidence            9985 999999654  4589999999999999999999999999996

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.83  E-value=6.3e-21  Score=154.03  Aligned_cols=128  Identities=23%  Similarity=0.405  Sum_probs=108.6

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ++...++.+.+.||+|+||.||++...      .+..||+|.+... .......+.+|+.+++.++||||+++++++.+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            344456777899999999999999643      3578999998754 334456789999999999999999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDE--------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+++|+|.+++...        ....+++..+..++.||+.||+|||++||+||+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  163 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD  163 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            8999999999999999998531        124578999999999999999999999999996

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.83  E-value=1.1e-20  Score=153.91  Aligned_cols=120  Identities=19%  Similarity=0.268  Sum_probs=104.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            356678899999999999975 57889999998643   12234578899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+ +|+|.+++...  ..+++.++..++.||+.||+|||++||+||+
T Consensus        90 ~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~D  133 (336)
T 3h4j_B           90 YA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD  133 (336)
T ss_dssp             CC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             CC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            99 68999988543  4589999999999999999999999999996

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.83  E-value=1.3e-20  Score=149.53  Aligned_cols=125  Identities=22%  Similarity=0.307  Sum_probs=105.1

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      +...++.+.+.||+|+||.||++....    +..+++|.+... .....+.+.+|+..++.++||||+++++++. .+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence            334566778999999999999997532    346999998654 3444567899999999999999999999984 4567


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++|+|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  141 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRD  141 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            8999999999999999653 34689999999999999999999999999996

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.83  E-value=3.5e-20  Score=158.71  Aligned_cols=122  Identities=23%  Similarity=0.296  Sum_probs=104.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh-------------hcHHHHHHHHHHHccCCCCCccceeeEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK-------------QGEKEFQTEVMLLGRLHHRNLVNLVGYC  177 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~~~  177 (235)
                      ..|.+.+.||+|+||.||++.. .++..+|+|.+.....             ...+.+.+|+.+++.++||||+++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4566778999999999999975 4578999999875421             2346789999999999999999999999


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+....++||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  171 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRD  171 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            9999999999999999999998543  4589999999999999999999999999996

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.83  E-value=2.8e-20  Score=155.79  Aligned_cols=125  Identities=18%  Similarity=0.259  Sum_probs=104.2

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--------hhcHHHHHHHHHHHccCCCCCccceeeEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCA  178 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~  178 (235)
                      +.....|.+.+.||+|+||.||++.. .++..||+|.+....        ......+.+|+.+++.++||||+++++++.
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            34456677889999999999999965 467899999986531        111224789999999999999999999975


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      . +..++||||+++|+|.+++..  ...+++..+..++.|++.||+|||+++|+||+
T Consensus       211 ~-~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  264 (419)
T 3i6u_A          211 A-EDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRD  264 (419)
T ss_dssp             S-SEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             c-CceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            4 567899999999999999853  35689999999999999999999999999996

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.83  E-value=3e-20  Score=149.37  Aligned_cols=121  Identities=24%  Similarity=0.294  Sum_probs=105.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +|.+.+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            3566788999999999999764 5889999998654  233356788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        84 ~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~d  127 (311)
T 4agu_A           84 CDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRD  127 (311)
T ss_dssp             CSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            9999999888543  4589999999999999999999999999996

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=1.2e-20  Score=153.75  Aligned_cols=125  Identities=26%  Similarity=0.308  Sum_probs=104.4

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-----ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+|.+.+.||+|+||.||++.. .++..+|+|.+...     .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            45677889999999999999975 46789999998643     2344567899999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 026630          185 LVYVFMSKGSLASHLYDE--------------------------------------NYGPLTWNLRVHIALDVARGLEYL  226 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~--------------------------------------~~~~~~~~~~~~~~~qi~~gl~yL  226 (235)
                      +||||+++|+|.+++...                                      ....+++..+..++.||+.||+||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999998410                                      011234667888999999999999


Q ss_pred             hcCCccccC
Q 026630          227 HDGVSCHLF  235 (235)
Q Consensus       227 H~~~ivHr~  235 (235)
                      |+++|+||+
T Consensus       185 H~~~ivH~D  193 (345)
T 3hko_A          185 HNQGICHRD  193 (345)
T ss_dssp             HHTTEECCC
T ss_pred             HHCCccccC
Confidence            999999996

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.83  E-value=3.9e-20  Score=161.73  Aligned_cols=115  Identities=25%  Similarity=0.380  Sum_probs=100.9

Q ss_pred             ccCCCCceeEEEEEeC---CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          119 LIGQGAFGPVYKAQMS---TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      .||+|+||.||+|.+.   ++..||||.++.. .....+.|.+|+.+++.++||||+++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            6999999999999753   4557999999765 33456789999999999999999999999876 46899999999999


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrD  461 (613)
T 2ozo_A          422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRN  461 (613)
T ss_dssp             HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCc
Confidence            99999543 45689999999999999999999999999996

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.83  E-value=2.2e-21  Score=157.78  Aligned_cols=124  Identities=18%  Similarity=0.200  Sum_probs=101.9

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC--------hhcHHHHHHHHHHHccCC---------CCCc
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS--------KQGEKEFQTEVMLLGRLH---------HRNL  170 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~ni  170 (235)
                      .+...+|.+.+.||+|+||.||++.. ++..||+|.+....        ....+.+.+|+.+++.++         ||||
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           16 CLPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             HSCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             hcccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            34566778889999999999999987 78999999997542        223467889998888775         7777


Q ss_pred             cceeeEEE------------------------------eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHH
Q 026630          171 VNLVGYCA------------------------------EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA  220 (235)
Q Consensus       171 v~~~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~  220 (235)
                      +++.+.+.                              +.+..++||||+++|++.+.+..   ..+++..+..++.||+
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT  171 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence            77776642                              26789999999999987777733   4589999999999999


Q ss_pred             HHHHHHh-cCCccccC
Q 026630          221 RGLEYLH-DGVSCHLF  235 (235)
Q Consensus       221 ~gl~yLH-~~~ivHr~  235 (235)
                      .||+||| +++|+||+
T Consensus       172 ~aL~~lH~~~~ivHrD  187 (336)
T 2vuw_A          172 ASLAVAEASLRFEHRD  187 (336)
T ss_dssp             HHHHHHHHHHCCBCSC
T ss_pred             HHHHHHHHhCCEeECC
Confidence            9999999 99999996

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.83  E-value=3e-20  Score=159.71  Aligned_cols=121  Identities=26%  Similarity=0.351  Sum_probs=105.3

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .+.+.||+|+||.||++.. .+++.+|+|.+...   .......+..|+.++..++||||+++++.+.+....++||||+
T Consensus       188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~  267 (543)
T 3c4z_A          188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIM  267 (543)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEec
Confidence            3446799999999999976 46899999999754   2234567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDEN--YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++....  ...+++..+..++.||+.||+|||++||+||+
T Consensus       268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrD  314 (543)
T 3c4z_A          268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD  314 (543)
T ss_dssp             TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence            9999999986532  34699999999999999999999999999996

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=3.6e-20  Score=146.96  Aligned_cols=121  Identities=22%  Similarity=0.323  Sum_probs=106.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+...  .....+.+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   86 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL   86 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence            456678899999999999975 45889999999754  344456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.|++.||+|||++|++||+
T Consensus        87 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  130 (284)
T 3kk8_A           87 VTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRN  130 (284)
T ss_dssp             CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCC
Confidence            9999999888543  4589999999999999999999999999996

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.83  E-value=3.1e-20  Score=151.55  Aligned_cols=119  Identities=18%  Similarity=0.262  Sum_probs=103.2

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ...|.+.+.||+|+||.||++.. .++..+|+|.+......    ..+|+.++.++ +||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            45677788999999999999975 45789999999765332    34677777777 79999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus        97 ~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrD  141 (342)
T 2qr7_A           97 LMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRD  141 (342)
T ss_dssp             CCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecc
Confidence            99999999999543  5689999999999999999999999999996

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2.2e-20  Score=154.18  Aligned_cols=120  Identities=28%  Similarity=0.476  Sum_probs=101.4

Q ss_pred             hhhhccCCCCceeEEEEEeC--CC--CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQMS--TG--ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYV  188 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e  188 (235)
                      .+.+.||+|+||.||+|...  ++  ..+|+|.+... .....+.|.+|+.+++.++||||+++++++.. .+..+++||
T Consensus        92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e  171 (373)
T 3c1x_A           92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  171 (373)
T ss_dssp             EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred             ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence            45578999999999999753  22  36899988654 44556789999999999999999999998754 557889999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       172 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  217 (373)
T 3c1x_A          172 YMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRD  217 (373)
T ss_dssp             CCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCc
Confidence            99999999999643 35588999999999999999999999999996

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.83  E-value=3.9e-20  Score=149.83  Aligned_cols=124  Identities=27%  Similarity=0.460  Sum_probs=107.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-----CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--EE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--QH  183 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~  183 (235)
                      ...+.+.+.||+|+||.||++.+     .++..||+|.+........+.+.+|+.+++.++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            34556778999999999999974     357899999998766666778999999999999999999999986543  67


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+++++|.+++.... ..+++..+..++.|++.||+|||+++|+||+
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  170 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRD  170 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            89999999999999996543 4589999999999999999999999999996

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.83  E-value=7e-20  Score=146.00  Aligned_cols=118  Identities=24%  Similarity=0.336  Sum_probs=102.9

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      ..||+|+||.||++.. .++..|++|.+........+.+.+|+.+++.++||||+++++.+...+..+++|||+++++|.
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            4799999999999975 567899999998766666678999999999999999999999999999999999999999999


Q ss_pred             hhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          197 SHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       197 ~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.... ...+++..+..++.||+.||+|||++|++||+
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  147 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD  147 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccC
Confidence            9996542 23467888999999999999999999999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.82  E-value=2.2e-20  Score=150.91  Aligned_cols=127  Identities=28%  Similarity=0.437  Sum_probs=99.7

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCC----CEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~----~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      +...+|.+.+.||+|+||.||++.....    ..||+|.+...  .....+.+.+|+.+++.++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            3445677789999999999999975433    27999998754  34456789999999999999999999999977655


Q ss_pred             E------EEEEEcccCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 H------MLVYVFMSKGSLASHLYDE----NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~------~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .      +++|||+++|+|.+++...    ....+++..+..++.||+.||+|||++||+||+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~D  162 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRD  162 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence            4      8999999999999998532    123589999999999999999999999999996

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.82  E-value=4.1e-20  Score=146.02  Aligned_cols=121  Identities=21%  Similarity=0.299  Sum_probs=106.5

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++... ++..+++|.+...   .....+.+.+|+..++.++||||+++++.+...+..+++||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME   91 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence            4566789999999999999764 6889999998654   22345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++...  ..+++..+..++.||+.||+|||+++++||+
T Consensus        92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  136 (276)
T 2h6d_A           92 YVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRD  136 (276)
T ss_dssp             CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred             ccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            99999999999643  4589999999999999999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.82  E-value=5e-20  Score=150.65  Aligned_cols=124  Identities=26%  Similarity=0.310  Sum_probs=106.1

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ....+...+.||+|+||.||++.. .++..||+|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            344566778899999999999974 578899999997542   2334578999999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||++ |+|.+++... ...+++..+..++.|++.||+|||+++|+||+
T Consensus       132 v~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  179 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  179 (348)
T ss_dssp             EEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            999997 6888887532 25689999999999999999999999999996

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.82  E-value=6.3e-20  Score=148.62  Aligned_cols=124  Identities=33%  Similarity=0.560  Sum_probs=103.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCE--EEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGET--VAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ..+.+.+.||+|+||.||++... ++..  +++|.+... .....+.+.+|+.++..+ +||||+++++++.+.+..+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            34567789999999999999653 4543  489988754 333445789999999999 999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++....              ...+++..+..++.||+.||+|||++||+||+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  167 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  167 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            99999999999996432              24689999999999999999999999999996

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=5.9e-20  Score=146.12  Aligned_cols=119  Identities=24%  Similarity=0.363  Sum_probs=102.3

Q ss_pred             hhhh-ccCCCCceeEEEEEeC---CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          115 NFTT-LIGQGAFGPVYKAQMS---TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       115 ~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+.+ .||+|+||.||++.+.   .+..||+|.+... .....+.+.+|+.+++.++||||+++++++ ..+..+++|||
T Consensus        12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~   90 (287)
T 1u59_A           12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEM   90 (287)
T ss_dssp             EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred             hhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEe
Confidence            3444 8999999999999753   5678999999765 444566799999999999999999999999 45568999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++.. ....+++..+..++.|++.||+|||+++++||+
T Consensus        91 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  135 (287)
T 1u59_A           91 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD  135 (287)
T ss_dssp             CTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence            999999999954 335689999999999999999999999999996

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.82  E-value=7e-20  Score=149.41  Aligned_cols=120  Identities=16%  Similarity=0.191  Sum_probs=105.6

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCC--CCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHH--RNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++...++..||+|.+...  .....+.+.+|+.++..++|  |||+++++++...+..+++||
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e   89 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME   89 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence            35667899999999999998878899999998754  34445678999999999976  999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +.+++|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        90 -~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrD  133 (343)
T 3dbq_A           90 -CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSD  133 (343)
T ss_dssp             -CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             -CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence             5578999999654  5689999999999999999999999999996

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=1.4e-20  Score=158.72  Aligned_cols=122  Identities=23%  Similarity=0.283  Sum_probs=98.1

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..+.+.+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+++.++||||+++++.+...+..++||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            3466678999999999999964 56889999999753   3334456788999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+ +||+||+
T Consensus       228 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrD  274 (446)
T 4ejn_A          228 EYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRD  274 (446)
T ss_dssp             CCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred             eeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECC
Confidence            999999999998543  468999999999999999999998 9999996

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.82  E-value=7.8e-20  Score=146.44  Aligned_cols=120  Identities=23%  Similarity=0.381  Sum_probs=106.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+... .....+.+.+|+.+++.++||||+++++.+...+..+++|||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  102 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL  102 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence            356678899999999999965 46889999999755 3445678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++|.+++..   ..+++..+..++.|++.||.|||++|++||+
T Consensus       103 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  144 (303)
T 3a7i_A          103 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRD  144 (303)
T ss_dssp             TTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            99999999943   4689999999999999999999999999985

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.82  E-value=3.5e-20  Score=149.96  Aligned_cols=119  Identities=32%  Similarity=0.480  Sum_probs=101.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC----EEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~  187 (235)
                      .++.+.+.||+|+||.||++.. .++.||+|.+.... .....+..|+..+..++||||+++++++....    ..++||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            3456678999999999999987 57899999996543 22335567888999999999999999997643    479999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG----------VSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~----------~ivHr~  235 (235)
                      ||+++|+|.+++...   .+++..+..++.|++.||+|||++          +|+||+
T Consensus       102 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~D  156 (322)
T 3soc_A          102 AFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRD  156 (322)
T ss_dssp             ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSC
T ss_pred             ecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCC
Confidence            999999999999653   489999999999999999999999          999996

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.82  E-value=4.6e-20  Score=147.37  Aligned_cols=121  Identities=28%  Similarity=0.458  Sum_probs=101.7

Q ss_pred             hhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEE-eCCEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA-EKGQHMLVY  187 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~  187 (235)
                      +.+.+.||+|+||.||++....    ...+++|.+... .....+.+.+|+.+++.++||||+++++++. ..+..+++|
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  106 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  106 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence            4556889999999999997532    225889988754 4445567899999999999999999999864 456789999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++... ...+++..+..++.|++.||+|||+++++||+
T Consensus       107 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~d  153 (298)
T 3f66_A          107 PYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRD  153 (298)
T ss_dssp             ECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            999999999999653 35689999999999999999999999999996

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.82  E-value=1e-20  Score=157.59  Aligned_cols=113  Identities=22%  Similarity=0.242  Sum_probs=95.2

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHc-cCCCCCccceeeEEEe----CCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLG-RLHHRNLVNLVGYCAE----KGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~~~~~lv~e~~~  191 (235)
                      +.||+|+||.||++.. .++..||+|.+...     ..+.+|+.++. ..+||||+++++++..    ....++||||++
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD  142 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence            6799999999999965 46889999998632     34667887764 4589999999999865    567899999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.......+++..+..++.||+.||+|||++||+||+
T Consensus       143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  186 (400)
T 1nxk_A          143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD  186 (400)
T ss_dssp             SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99999999765445699999999999999999999999999996

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.82  E-value=7.5e-20  Score=146.15  Aligned_cols=121  Identities=26%  Similarity=0.378  Sum_probs=103.3

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      |.+.+.||+|+||.||++... ++..+|+|.+...  .......+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus         5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (299)
T 2r3i_A            5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   84 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence            456688999999999999764 6889999998654  2233467889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + ++|.+++.......+++..+..++.||+.||+|||++|++||+
T Consensus        85 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  128 (299)
T 2r3i_A           85 H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  128 (299)
T ss_dssp             S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             c-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            7 5999999766556689999999999999999999999999996

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.82  E-value=1.1e-19  Score=145.97  Aligned_cols=123  Identities=20%  Similarity=0.270  Sum_probs=105.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+...   +......+.+|+.+++.++||||+++++.+...+..+++||
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            466778999999999999975 56889999999753   34455678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++..  .....+++..+..++.||+.||+|||++|++||+
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  161 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRD  161 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            9999999999853  2235689999999999999999999999999996

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.82  E-value=1.1e-20  Score=150.53  Aligned_cols=125  Identities=30%  Similarity=0.424  Sum_probs=104.4

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      .|+...++.+.+.||+|+||.||++...  ..+++|.+...  .....+.|.+|+.+++.++||||+++++++ ..+..+
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~   95 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA   95 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence            3555666778899999999999999863  35999998654  344556799999999999999999999965 445678


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++++|.+++... ...+++..+..++.|++.||+|||+++|+||+
T Consensus        96 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~D  145 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRD  145 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            999999999999999543 35689999999999999999999999999996

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.82  E-value=2.9e-20  Score=147.79  Aligned_cols=121  Identities=31%  Similarity=0.555  Sum_probs=103.1

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChh-------cHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ-------GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      .++.+.+.||+|+||.||++.. .++..||+|.+......       ..+.+.+|+.+++.++||||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            4456778999999999999975 46889999998654221       1267899999999999999999999986655  


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      +++|||+++|+|.+++... ...+++..+..++.|++.||+|||+++  ++||+
T Consensus        97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~d  149 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRD  149 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSC
T ss_pred             eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCC
Confidence            6999999999999988653 356899999999999999999999999  99996

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.82  E-value=4.4e-20  Score=146.20  Aligned_cols=121  Identities=23%  Similarity=0.338  Sum_probs=105.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+++.++||||+++++++.+.+..+++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   89 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence            456678899999999999965 45678999998643   22334578899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.|++.||+|||++||+||+
T Consensus        90 ~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d  134 (279)
T 3fdn_A           90 YAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRD  134 (279)
T ss_dssp             CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECC
T ss_pred             cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            99999999998543  4589999999999999999999999999996

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.82  E-value=6.8e-20  Score=148.54  Aligned_cols=124  Identities=25%  Similarity=0.429  Sum_probs=100.2

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      ...+|.+.+.||+|+||.||++... ++.    .|++|.+... .....+.+.+|+.+++.++||||+++++++.... .
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~   91 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence            3445667789999999999999753 333    4688887544 3455678999999999999999999999998765 6


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++||+++|+|.+++.... ..+++..+..++.||+.||+|||+++|+||+
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~D  142 (327)
T 3poz_A           92 QLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  142 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            78999999999999996543 5689999999999999999999999999996

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.82  E-value=5.5e-20  Score=147.90  Aligned_cols=122  Identities=24%  Similarity=0.339  Sum_probs=107.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..|.+.+.||+|+||.||++... ++..||+|.+...   +....+.+.+|+..++.++||||+++++++...+..++++
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            45667789999999999999753 6789999998654   2333467899999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++...  ..+++..+..++.|++.||+|||+++|+||+
T Consensus       114 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  159 (309)
T 2h34_A          114 RLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRD  159 (309)
T ss_dssp             ECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCC
Confidence            999999999999643  4589999999999999999999999999996

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.82  E-value=5.7e-20  Score=149.08  Aligned_cols=119  Identities=18%  Similarity=0.178  Sum_probs=103.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+.....  ...+.+|+.+++.+ +||||+++++++...+..+++|||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            456678899999999999974 5788999999875432  23578999999999 9999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrD  130 (330)
T 2izr_A           88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRD  130 (330)
T ss_dssp             -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence             89999999653 35699999999999999999999999999996

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.82  E-value=9.4e-20  Score=149.45  Aligned_cols=125  Identities=21%  Similarity=0.252  Sum_probs=107.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-----CCCccceeeEEEeCCE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-----HRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~  182 (235)
                      +...+|.+.+.||+|+||.||++.. .++..||+|.+... ......+..|+.++..+.     ||||+++++.+...+.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            3345677789999999999999975 56789999998643 334456778888888885     9999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||+
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  162 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTD  162 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            99999999 88999999776556799999999999999999999999999996

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.82  E-value=3.8e-20  Score=145.86  Aligned_cols=119  Identities=33%  Similarity=0.507  Sum_probs=100.5

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC----hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ++.+.+.||+|+||.||++.. .+..+|+|.+....    ....+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             heeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            456678899999999999987 58899999986542    2335678999999999999999999999999989999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---ccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV---SCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~---ivHr~  235 (235)
                      |+++++|.+++..   ..+++..+..++.|++.||+|||+++   ++||+
T Consensus        87 ~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~d  133 (271)
T 3dtc_A           87 FARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD  133 (271)
T ss_dssp             CCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSC
T ss_pred             cCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecC
Confidence            9999999999843   46899999999999999999999999   88986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.82  E-value=9.5e-20  Score=146.70  Aligned_cols=119  Identities=26%  Similarity=0.328  Sum_probs=98.8

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEE-------------
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA-------------  178 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-------------  178 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+...+....+.+.+|+.+++.++||||+++++++.             
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   91 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL   91 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence            4566788999999999999764 47899999998776666778999999999999999999998873             


Q ss_pred             -eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 -EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       .....+++|||++ |+|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  145 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRD  145 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             cccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence             3467899999998 699999843   4589999999999999999999999999996

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.82  E-value=1.4e-20  Score=152.70  Aligned_cols=127  Identities=25%  Similarity=0.423  Sum_probs=107.1

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC------CCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeC
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST------GETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEK  180 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~  180 (235)
                      +....+.+.+.||+|+||.||++....      ...|++|.+... .....+.+.+|+.++..+ +||||+++++++...
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            334556677899999999999997532      247999999765 344556789999999999 899999999999998


Q ss_pred             CEEEEEEEcccCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDEN------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+++|+|.+++....            ...+++..+..++.||+.||+|||+++|+||+
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  189 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD  189 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            99999999999999999985421            24578999999999999999999999999996

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.82  E-value=7.4e-20  Score=148.50  Aligned_cols=121  Identities=27%  Similarity=0.397  Sum_probs=105.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +|.+.+.||+|+||.||++... ++..||+|.+...  .....+.+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  105 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF  105 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence            4566789999999999999764 5889999998654  333445688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       106 ~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~d  149 (331)
T 4aaa_A          106 VDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRD  149 (331)
T ss_dssp             CSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccC
Confidence            9999888876433  4589999999999999999999999999996

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.82  E-value=6.3e-20  Score=148.32  Aligned_cols=124  Identities=19%  Similarity=0.265  Sum_probs=103.2

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--------hhcHHHHHHHHHHHccCCCCCccceeeEEEe
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE  179 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~  179 (235)
                      .....|.+.+.||+|+||.||++.. .++..||+|.+....        ......+.+|+.+++.++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            4456788889999999999999975 457899999986432        1123357899999999999999999999876


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .. .+++|||+++++|.+++..  ...+++..+..++.||+.||+|||++||+||+
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  139 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRD  139 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             Cc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            65 7999999999999999853  35689999999999999999999999999996

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.82  E-value=1.1e-20  Score=151.05  Aligned_cols=127  Identities=26%  Similarity=0.340  Sum_probs=93.5

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +....|.+.+.||+|+||.||++.. .++..||+|.+... .....+.+.+|+..+..++||||+++++.+...+..+++
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            3344566778999999999999974 46789999998654 233455788999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYD------ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++..      .....+++..+..++.||+.||+|||++|++||+
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  146 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD  146 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999853      1235689999999999999999999999999996

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.82  E-value=3.3e-20  Score=152.24  Aligned_cols=123  Identities=20%  Similarity=0.288  Sum_probs=107.9

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      ..+|.+.+.||+|+||.||++... ++..+|+|.+... .....+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            345566788999999999999764 6789999999765 44455678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      |+++++|.+++...  ..+++..+..++.|++.||+|||++ +|+||+
T Consensus       112 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~d  157 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD  157 (360)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCC
Confidence            99999999999653  4589999999999999999999996 999996

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.82  E-value=1.2e-19  Score=150.49  Aligned_cols=120  Identities=16%  Similarity=0.187  Sum_probs=105.4

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCC--CCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++....+..||+|.+...  .......+.+|+.++..++  ||||+++++++...+..+++||
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E  136 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME  136 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence            35677899999999999998777899999999754  3445567999999999996  5999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +.+++|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus       137 -~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrD  180 (390)
T 2zmd_A          137 -CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSD  180 (390)
T ss_dssp             -CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             -cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence             5678999999654  4689999999999999999999999999996

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.82  E-value=8.8e-20  Score=160.02  Aligned_cols=115  Identities=25%  Similarity=0.385  Sum_probs=100.1

Q ss_pred             hccCCCCceeEEEEEeC---CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMS---TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||+|.+.   .+..||||.++..  +....+.+.+|+.+++.++||||+++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            46999999999999642   4568999999754  33446789999999999999999999999865 457899999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..+++..+..++.||+.||+|||+++||||+
T Consensus       454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrD  494 (635)
T 4fl3_A          454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRD  494 (635)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCC
Confidence            9999999654  4589999999999999999999999999996

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=6.4e-20  Score=146.42  Aligned_cols=119  Identities=27%  Similarity=0.389  Sum_probs=101.0

Q ss_pred             hhhccCCCCceeEEEEEeC-CCC---EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE-EEEEEc
Q 026630          116 FTTLIGQGAFGPVYKAQMS-TGE---TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH-MLVYVF  189 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~-~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~  189 (235)
                      ..+.||+|+||.||++... ++.   .+|+|.+... .....+.+.+|+.+++.++||||+++++++.+.+.. ++++||
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~  104 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY  104 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence            3478999999999999742 222   6999998754 344556889999999999999999999999765544 899999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+|+|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus       105 ~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  149 (298)
T 3pls_A          105 MCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRD  149 (298)
T ss_dssp             CTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            9999999999653 35689999999999999999999999999996

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.81  E-value=2.3e-20  Score=148.16  Aligned_cols=122  Identities=23%  Similarity=0.377  Sum_probs=106.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+|.+.+.||+|+||.||++... ++..+++|.+...   .......+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            34667789999999999999764 5678999998643   2223467889999999999999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus        94 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  139 (284)
T 2vgo_A           94 EFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRD  139 (284)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             EeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            999999999999653  4589999999999999999999999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=145.87  Aligned_cols=125  Identities=24%  Similarity=0.332  Sum_probs=102.6

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +.....|.+.+.||+|+||.||++... ++..||+|.+....  ....+.+|+.++..++||||+++++.+...+..+++
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            445566777889999999999999764 58899999997543  345788999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++... ...+++..+..++.|++.||.|||++|++||+
T Consensus       103 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  150 (314)
T 3com_A          103 MEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRD  150 (314)
T ss_dssp             EECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             eecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence            9999999999998532 35689999999999999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.81  E-value=3.9e-20  Score=150.52  Aligned_cols=124  Identities=21%  Similarity=0.257  Sum_probs=106.3

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh--------hcHHHHHHHHHHHccCCCCCccceeeEEEeC
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK--------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK  180 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~  180 (235)
                      ...+|.+.+.||+|+||.||++.. .++..||+|.+.....        .....+.+|+.+++.++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            345677788999999999999964 5678999999975421        1233567899999999999999999999999


Q ss_pred             CEEEEEEEcccCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+..| +|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  155 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRD  155 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEec
Confidence            9999999999776 999998543  4689999999999999999999999999996

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.81  E-value=1.3e-19  Score=144.76  Aligned_cols=122  Identities=24%  Similarity=0.295  Sum_probs=104.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe-----------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-----------  179 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----------  179 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+... ....+.+.+|+.+++.++||||+++++.+.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            4567778999999999999975 46889999998643 3345678999999999999999999998754           


Q ss_pred             --CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 --KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                        ....+++|||+++|+|.+++.... ..+++..+..++.|++.||+|||+++++||+
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  141 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRD  141 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence              356799999999999999996532 4578889999999999999999999999996

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.81  E-value=1.6e-19  Score=148.60  Aligned_cols=124  Identities=20%  Similarity=0.282  Sum_probs=107.1

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh--------hcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK--------QGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ....|.+.+.||+|+||.||++... +|..||||.++....        ...+.+.+|+.++..+ +||||+++++++..
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            3455667789999999999999764 689999999875421        1244678999999998 89999999999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ....++||||+++++|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus       172 ~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~D  225 (365)
T 2y7j_A          172 SSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRD  225 (365)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            99999999999999999999643  4589999999999999999999999999996

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=1.8e-19  Score=144.71  Aligned_cols=127  Identities=28%  Similarity=0.362  Sum_probs=101.3

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-----hhcHHHHHHHHHHHccC---CCCCccceeeEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-----KQGEKEFQTEVMLLGRL---HHRNLVNLVGYCA  178 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~  178 (235)
                      ++...+|.+.+.||+|+||.||++.. .++..||+|.+....     ......+.+|+..++.+   +||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            44556778889999999999999974 568899999986431     12234566777776665   5999999999997


Q ss_pred             eCC-----EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKG-----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...     ..+++|||++ |+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus        85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  145 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD  145 (308)
T ss_dssp             ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            754     5789999997 5999999766555699999999999999999999999999996

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.81  E-value=5.1e-20  Score=155.84  Aligned_cols=120  Identities=21%  Similarity=0.254  Sum_probs=94.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  184 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...  +....+.+.+|+.+++.++||||+++++++...     ...+
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            567788999999999999964 46889999998653  344556789999999999999999999998433     5689


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+. ++|.+++...  ..+++..+..++.||+.||+|||++|||||+
T Consensus       134 lv~e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrD  181 (458)
T 3rp9_A          134 VVLEIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRD  181 (458)
T ss_dssp             EEECCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEEeccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCC
Confidence            9999984 6999998543  5699999999999999999999999999996

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.81  E-value=2e-19  Score=143.15  Aligned_cols=119  Identities=27%  Similarity=0.345  Sum_probs=102.7

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVY  187 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~  187 (235)
                      .+.+.||+|+||.||++.. .++..|++|.+...  .....+.+.+|+.+++.++||||+++++++..    ....++||
T Consensus        29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  108 (290)
T 1t4h_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence            4567899999999999965 46778999998754  44556678999999999999999999998865    35689999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+++  ++||+
T Consensus       109 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~d  156 (290)
T 1t4h_A          109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRD  156 (290)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSC
T ss_pred             EecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECC
Confidence            999999999999543  45899999999999999999999999  99996

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.81  E-value=1.3e-19  Score=145.72  Aligned_cols=126  Identities=27%  Similarity=0.451  Sum_probs=101.1

Q ss_pred             HHHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC--
Q 026630          110 QKATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG--  181 (235)
Q Consensus       110 ~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--  181 (235)
                      ....+.+.+.||+|+||.||++...    .+..+|+|.+...  .....+.+.+|+.+++.++||||+++++++....  
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            3445667788999999999999653    2347999998754  3444567899999999999999999999987654  


Q ss_pred             ---EEEEEEEcccCCChhhhhhc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 ---QHMLVYVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ---~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                         ..+++|||+++|+|.+++..    .....+++..+..++.||+.||.|||+++|+||+
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  172 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRD  172 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence               35899999999999999843    2235689999999999999999999999999996

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.81  E-value=1.3e-19  Score=144.75  Aligned_cols=121  Identities=21%  Similarity=0.221  Sum_probs=105.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---------hhcHHHHHHHHHHHccCC-CCCccceeeEEEeCC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---------KQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKG  181 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~  181 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+....         ....+.+.+|+.++.++. ||||+++++++...+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   97 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence            456678899999999999976 467899999997542         122456789999999995 999999999999999


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++|||+++++|.+++...  ..+++..+..++.||+.||+|||++|++||+
T Consensus        98 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  149 (298)
T 1phk_A           98 FFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRD  149 (298)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999999999999999643  4589999999999999999999999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.81  E-value=2.6e-20  Score=149.87  Aligned_cols=128  Identities=30%  Similarity=0.488  Sum_probs=106.6

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ++...++.+.+.||+|+||.||++..      .++..||+|.+... .....+.+.+|+.++..+ +||||+++++.+..
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  102 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  102 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence            34455677789999999999999963      24578999999765 334456789999999999 79999999999876


Q ss_pred             CC-EEEEEEEcccCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KG-QHMLVYVFMSKGSLASHLYDENY--------------GPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~-~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+ ..+++|||+++|+|.+++.....              ..+++..+..++.||+.||+|||+++|+||+
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d  173 (316)
T 2xir_A          103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD  173 (316)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            54 58999999999999999965321              1278899999999999999999999999996

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.81  E-value=2.6e-20  Score=147.46  Aligned_cols=122  Identities=31%  Similarity=0.466  Sum_probs=103.1

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-CEEEEEEEc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-GQHMLVYVF  189 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~  189 (235)
                      ...+.+.+.||+|+||.||++.. .+..+++|.+....  ..+.+.+|+.+++.++||||+++++.+... +..+++|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            34566778999999999999987 58899999986543  446789999999999999999999987554 468999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++|.+++.......+++..+..++.|++.||+|||++|++||+
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  142 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  142 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            9999999999654323478899999999999999999999999996

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.81  E-value=1.4e-19  Score=144.25  Aligned_cols=121  Identities=25%  Similarity=0.372  Sum_probs=101.4

Q ss_pred             HHhhhhh-ccCCCCceeEEEEEe---CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          112 ATCNFTT-LIGQGAFGPVYKAQM---STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       112 ~~~~~~~-~lg~G~~g~v~~~~~---~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      .++.+.+ .||+|+||.||++.+   ..+..+++|.+...  .....+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            3445555 899999999999954   23578999998754  233356799999999999999999999998 5567889


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++++|.+++...  ..+++..+..++.||+.||+|||+++++||+
T Consensus        95 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  142 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRD  142 (291)
T ss_dssp             EEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCC
Confidence            99999999999999654  4589999999999999999999999999996

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=3.9e-20  Score=151.69  Aligned_cols=122  Identities=22%  Similarity=0.251  Sum_probs=105.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecCC----hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDS----KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~  182 (235)
                      ..|.+.+.||+|+||.||++..    .++..||+|.+....    ......+.+|+.++..+ +||||+++++.+...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            4567788999999999999976    368899999986431    22334567899999999 79999999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  184 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRD  184 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999999999999653  4589999999999999999999999999996

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.81  E-value=8.9e-20  Score=145.77  Aligned_cols=117  Identities=27%  Similarity=0.390  Sum_probs=97.8

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHcc--CCCCCccceeeEEEe----CCEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR--LHHRNLVNLVGYCAE----KGQHML  185 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~~l  185 (235)
                      .++.+.+.||+|+||.||++.. ++..||+|.+...   ....+..|.+++..  ++||||+++++.+..    ....++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            4566778999999999999988 7889999998643   23445566665554  799999999998754    246789


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH--------DGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH--------~~~ivHr~  235 (235)
                      +|||+++|+|.+++..   ..+++..+..++.||+.||+|||        +++|+||+
T Consensus        84 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  138 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRD  138 (301)
T ss_dssp             EECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSC
T ss_pred             ehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCC
Confidence            9999999999999943   45899999999999999999999        99999996

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.80  E-value=1.6e-19  Score=143.07  Aligned_cols=122  Identities=23%  Similarity=0.388  Sum_probs=103.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.+.+.||+|+||.||++....    +..|++|.+... .....+.+.+|+.+++.++||||+++++++.+. ..+++
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEE
Confidence            455677899999999999997532    235999998765 444566899999999999999999999998654 46899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++++|.+++... ...+++..+..++.|++.||+|||++|++||+
T Consensus        91 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  138 (281)
T 3cc6_A           91 MELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRD  138 (281)
T ss_dssp             EECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999999999999653 24589999999999999999999999999996

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.80  E-value=2.7e-20  Score=164.71  Aligned_cols=126  Identities=18%  Similarity=0.229  Sum_probs=104.8

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC--CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS--TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ..++...+|.+.+.||+|+||.||++...  +++.|++|.+... .......+.+|+.++..++||||+++++++...+.
T Consensus        74 ~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  153 (681)
T 2pzi_A           74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR  153 (681)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT
T ss_pred             CCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC
Confidence            34444567788899999999999999764  5789999998654 44455678999999999999999999999976544


Q ss_pred             -----EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 -----HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 -----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                           .++||||+++++|.+++..    .+++.++..++.||+.||+|||++|||||+
T Consensus       154 ~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrD  207 (681)
T 2pzi_A          154 HGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYND  207 (681)
T ss_dssp             TSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Confidence                 6999999999999988732    589999999999999999999999999996

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.80  E-value=3.4e-19  Score=144.48  Aligned_cols=123  Identities=25%  Similarity=0.428  Sum_probs=103.4

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..+|.+.+.||+|+||.||++... ++.    .+++|.+... .....+.+.+|+.+++.++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            345667789999999999999753 344    3577777544 4455678999999999999999999999998765 77


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++|+|.+++.... ..+++..+..++.||+.||+|||+++|+||+
T Consensus        93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  142 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  142 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCC
Confidence            8999999999999996543 5689999999999999999999999999996

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=1.2e-19  Score=145.44  Aligned_cols=122  Identities=27%  Similarity=0.333  Sum_probs=102.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC----hhcHHHHHHHHHHHccCCCCCccceeeEEE--eCCEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS----KQGEKEFQTEVMLLGRLHHRNLVNLVGYCA--EKGQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l  185 (235)
                      +|.+.+.||+|+||.||++.. .++..+++|.+....    ......+.+|+.+++.++||||+++++++.  .....++
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            456778999999999999975 467899999986532    234567899999999999999999999984  4457899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||++++ |.+++.......+++..+..++.||+.||+|||+++++||+
T Consensus        86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d  134 (305)
T 2wtk_C           86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKD  134 (305)
T ss_dssp             EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            99999876 77777655556799999999999999999999999999996

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.80  E-value=4.4e-20  Score=149.52  Aligned_cols=121  Identities=27%  Similarity=0.481  Sum_probs=99.9

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCE----EEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGET----VAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ++.+.+.||+|+||.||++... ++..    +++|.+... .......+.+|+.+++.++||||+++++++.+ +..+++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v   92 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLV   92 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEEE
Confidence            4566788999999999999753 3443    788887543 23334467789999999999999999998864 467899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+++|+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  140 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRN  140 (325)
T ss_dssp             EECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence            9999999999999653 34688899999999999999999999999996

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.80  E-value=2.9e-19  Score=145.32  Aligned_cols=126  Identities=27%  Similarity=0.366  Sum_probs=108.5

Q ss_pred             ccCHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHcc--CCCCCccceeeEEEeC
Q 026630          103 EYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR--LHHRNLVNLVGYCAEK  180 (235)
Q Consensus       103 ~~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~  180 (235)
                      +....+.....+.+.+.||+|+||.||++.. ++..||+|.+...   ....+.+|..++..  ++||||+++++.+...
T Consensus        33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            3445667778888999999999999999987 6889999998643   33467788887776  7999999999999876


Q ss_pred             C----EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCccccC
Q 026630          181 G----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH--------DGVSCHLF  235 (235)
Q Consensus       181 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH--------~~~ivHr~  235 (235)
                      .    ..+++|||+++|+|.+++..   ..+++..+..++.|++.||+|||        +++|+||+
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  172 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  172 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             CCccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCC
Confidence            5    78999999999999999954   35899999999999999999999        99999996

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.80  E-value=4.6e-20  Score=149.38  Aligned_cols=120  Identities=24%  Similarity=0.287  Sum_probs=100.6

Q ss_pred             hhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh-hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      |.+.+.||+|+||.||++... ++..||+|.+..... .....+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            556788999999999999764 688999999865422 112245679999999999999999999999999999999997


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       |+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        84 -~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  125 (324)
T 3mtl_A           84 -KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRD  125 (324)
T ss_dssp             -EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             -cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence             5999988653 34689999999999999999999999999996

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=5.9e-19  Score=143.18  Aligned_cols=125  Identities=24%  Similarity=0.318  Sum_probs=104.6

Q ss_pred             cCHHHHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHcc--CCCCCccceeeEEEeC-
Q 026630          104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR--LHHRNLVNLVGYCAEK-  180 (235)
Q Consensus       104 ~~~~~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~-  180 (235)
                      ....+....+|.+.+.||+|+||.||++.. .+..||+|.+....   ...+..|.+++..  ++||||+++++.+... 
T Consensus        29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             HHHHTTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             cccccccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            334556667888899999999999999987 58899999986432   2344555555554  4999999999999876 


Q ss_pred             ---CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CccccC
Q 026630          181 ---GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG--------VSCHLF  235 (235)
Q Consensus       181 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~--------~ivHr~  235 (235)
                         ...+++|||+++|+|.+++...   .+++..+..++.|++.||+|||++        +|+||+
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  167 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD  167 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSC
T ss_pred             CCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecc
Confidence               7899999999999999999543   589999999999999999999999        999996

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.80  E-value=2.5e-19  Score=144.90  Aligned_cols=122  Identities=29%  Similarity=0.458  Sum_probs=105.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEe------CCEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE------KGQHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~~  184 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+.... .....+.+|+..++.+ +||||+++++++..      .+..+
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~  103 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW  103 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence            356678899999999999975 468899999987543 2345788999999998 89999999999976      46789


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++.......+++..+..++.||+.||+|||++|++||+
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  154 (326)
T 2x7f_A          104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRD  154 (326)
T ss_dssp             EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            999999999999999765445689999999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.80  E-value=1.6e-19  Score=145.14  Aligned_cols=118  Identities=30%  Similarity=0.436  Sum_probs=101.0

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      ++.+.+.||+|+||.||++.. .+..+|+|.+...  ...+.|.+|+..++.++||||+++++.+.+  ..+++|||+++
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             HeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            455678899999999999987 5788999998643  344678999999999999999999998764  47899999999


Q ss_pred             CChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCccccC
Q 026630          193 GSLASHLYDENY-GPLTWNLRVHIALDVARGLEYLHD---GVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~gl~yLH~---~~ivHr~  235 (235)
                      |+|.+++..... ..+++..++.++.|++.||+|||+   ++|+||+
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~d  130 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD  130 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCC
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCC
Confidence            999999965432 247889999999999999999999   8999996

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.80  E-value=2.6e-19  Score=143.28  Aligned_cols=113  Identities=22%  Similarity=0.251  Sum_probs=98.3

Q ss_pred             hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHH-ccCCCCCccceeeEEEe----CCEEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLL-GRLHHRNLVNLVGYCAE----KGQHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~~  191 (235)
                      +.||+|+||.||++.. .++..||+|.+...     ..+.+|+..+ +..+||||+++++++..    ....+++|||++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~   98 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   98 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence            6799999999999965 56889999998632     3566788877 55699999999999876    667899999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.......+++..+..++.|++.||+|||+++|+||+
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  142 (299)
T 3m2w_A           99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD  142 (299)
T ss_dssp             SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999765555799999999999999999999999999996

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.80  E-value=1.2e-19  Score=152.56  Aligned_cols=120  Identities=22%  Similarity=0.247  Sum_probs=103.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  184 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...     ...+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            456778999999999999975 45778999999754  344456789999999999999999999998765     5789


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||++ |+|.+++...  ..+++..+..++.||+.||+|||++||+||+
T Consensus       107 lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrD  154 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRD  154 (432)
T ss_dssp             EEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence            9999996 5999999543  5689999999999999999999999999996

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.80  E-value=4.6e-19  Score=144.89  Aligned_cols=122  Identities=30%  Similarity=0.404  Sum_probs=102.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--------C
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--------K  180 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~  180 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++.+..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            3566778999999999999976 57889999998654  23334578899999999999999999999876        3


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..++||||+++ +|.+.+... ...+++.++..++.||+.||+|||++||+||+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D  149 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRD  149 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            468999999975 888777543 35689999999999999999999999999996

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.80  E-value=2.3e-19  Score=141.89  Aligned_cols=123  Identities=21%  Similarity=0.255  Sum_probs=104.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~  187 (235)
                      .|.+.+.||+|+||.||++.. .++..+++|.+...  .....+.+.+|+.+++.++||||+++++.+.+  ....+++|
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   86 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   86 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred             heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence            455678899999999999975 46889999999754  34455678999999999999999999998754  57899999


Q ss_pred             EcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-----ccccC
Q 026630          188 VFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGV-----SCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~-----ivHr~  235 (235)
                      ||+++++|.+++...  ....+++..+..++.|++.||+|||+++     ++||+
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~d  141 (279)
T 2w5a_A           87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD  141 (279)
T ss_dssp             ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCC
T ss_pred             eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEec
Confidence            999999999999642  2345899999999999999999999999     99986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.80  E-value=2e-19  Score=147.55  Aligned_cols=122  Identities=23%  Similarity=0.247  Sum_probs=102.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC-----------hhcHHHHHHHHHHHccCCCCCccceeeEEEe-
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS-----------KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-  179 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-  179 (235)
                      ..|.+.+.||+|+||.||++...++..||+|.+....           ....+.+.+|+.+++.++||||+++++++.. 
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  101 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF  101 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred             cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence            3455668999999999999987789999999985431           1123678999999999999999999999844 


Q ss_pred             ----CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 ----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                          ....+++|||++ |+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus       102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  159 (362)
T 3pg1_A          102 EEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRD  159 (362)
T ss_dssp             CTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             cCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecC
Confidence                236899999998 5898888643 35689999999999999999999999999996

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=3e-19  Score=148.00  Aligned_cols=123  Identities=26%  Similarity=0.365  Sum_probs=96.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCC-CCCccceeeEEEeCC--E
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKG--Q  182 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~  182 (235)
                      ....+|.+.+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.++..+. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3445677788999999999999964 56889999998643  3445567889999999996 999999999997544  6


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||++ ++|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrD  134 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRD  134 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            899999997 599999865   3589999999999999999999999999996

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.80  E-value=3.3e-19  Score=146.55  Aligned_cols=125  Identities=19%  Similarity=0.222  Sum_probs=99.9

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC------CCEEEEEEeecCChhc-----------HHHHHHHHHHHccCCCCCcc
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST------GETVAVKVLATDSKQG-----------EKEFQTEVMLLGRLHHRNLV  171 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv  171 (235)
                      +....|.+.+.||+|+||.||++....      +..||+|.+.......           ...+..|+..+..++||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            334456778899999999999997643      4789999987654221           11234566677888999999


Q ss_pred             ceeeEEEeC----CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          172 NLVGYCAEK----GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       172 ~~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++++++...    ...+++|||+ +++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrD  177 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGD  177 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEec
Confidence            999998664    4579999999 99999999653 35699999999999999999999999999996

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.79  E-value=1.6e-19  Score=159.35  Aligned_cols=122  Identities=24%  Similarity=0.276  Sum_probs=105.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv  186 (235)
                      .++.+.+.||+|+||.||++.. .++..+|+|.+...   .......+..|..++..+ +||+|+.+.+++.+.+..++|
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV  420 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV  420 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred             cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence            3456678899999999999975 45788999999753   223445678899999887 799999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||+++||||+
T Consensus       421 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrD  467 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD  467 (674)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCC
T ss_pred             EeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            9999999999999653  4589999999999999999999999999996

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.79  E-value=3.4e-19  Score=156.85  Aligned_cols=126  Identities=22%  Similarity=0.317  Sum_probs=106.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ  182 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~  182 (235)
                      ++...++.+.+.||+|+||.||+|.+..    +..+|+|.+... .....+.+.+|+.+++.++||||+++++++.+ +.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence            3445567778899999999999997632    347899988654 44445689999999999999999999999854 56


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++||||+++|+|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  516 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRD  516 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            88999999999999999653 34589999999999999999999999999996

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=2e-19  Score=148.15  Aligned_cols=119  Identities=26%  Similarity=0.321  Sum_probs=96.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~  183 (235)
                      .|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...+      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            355678899999999999975 56899999998643  3344567899999999999999999999997653      45


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+ +++|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus       106 ~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~D  153 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD  153 (367)
T ss_dssp             EEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999 7899999864   3589999999999999999999999999996

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.79  E-value=5.3e-19  Score=143.20  Aligned_cols=116  Identities=20%  Similarity=0.299  Sum_probs=101.8

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CCCccceeeEEEe--CCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCAE--KGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~  187 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+....   .+.+.+|+.++..++ ||||+++++++.+  ....+++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            4456778999999999999964 578899999986433   357889999999996 9999999999987  56789999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++++|.+++.     .++...+..++.||+.||+|||++||+||+
T Consensus       113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  155 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRD  155 (330)
T ss_dssp             ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            9999999999983     388999999999999999999999999996

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.79  E-value=2.8e-19  Score=148.00  Aligned_cols=119  Identities=20%  Similarity=0.316  Sum_probs=97.2

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe-----------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-----------  179 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----------  179 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+..+...    ..+|+.+++.++||||+++++++..           
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            3466778999999999999964 57899999998755322    2379999999999999999999843           


Q ss_pred             ---------------------------CCEEEEEEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          180 ---------------------------KGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       180 ---------------------------~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                                                 ....++||||++ |+|.+.+..  .....+++..+..++.||+.||+|||++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence                                       234889999998 488777743  23456899999999999999999999999


Q ss_pred             ccccC
Q 026630          231 SCHLF  235 (235)
Q Consensus       231 ivHr~  235 (235)
                      |+||+
T Consensus       162 i~H~D  166 (383)
T 3eb0_A          162 ICHRD  166 (383)
T ss_dssp             EECSC
T ss_pred             CccCc
Confidence            99996

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.79  E-value=7.3e-20  Score=149.42  Aligned_cols=125  Identities=18%  Similarity=0.206  Sum_probs=98.5

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC----CCCEEEEEEeecCChh-----------cHHHHHHHHHHHccCCCCCccc
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS----TGETVAVKVLATDSKQ-----------GEKEFQTEVMLLGRLHHRNLVN  172 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~  172 (235)
                      ++...+|.+.+.||+|+||.||++...    .+..+|+|........           ....+.+|+..+..++||||++
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            344456777899999999999999764    5678999998755321           1234667888899999999999


Q ss_pred             eeeEEEe----CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          173 LVGYCAE----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       173 ~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++.+..    ....+++|||+ +++|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  176 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGD  176 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999977    67889999999 99999999543  3689999999999999999999999999996

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.79  E-value=1.4e-19  Score=148.18  Aligned_cols=118  Identities=20%  Similarity=0.216  Sum_probs=100.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCC---------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccc----------
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMST---------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVN----------  172 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~----------  172 (235)
                      ..|.+.+.||+|+||.||++....         +..+|+|.+...     +.+.+|+.++..++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            456778899999999999997643         789999998754     35788999999999999887          


Q ss_pred             -----eeeEEEe-CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          173 -----LVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       173 -----~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                           +++++.. ....+++|||+ +++|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  184 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGN  184 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence                 5667765 67889999999 99999999765346799999999999999999999999999996

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.78  E-value=2.8e-20  Score=150.00  Aligned_cols=125  Identities=26%  Similarity=0.406  Sum_probs=105.8

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      ++...++.+.+.||+|+||.||++....  .+++|.+...  .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence            3344556678899999999999998743  4899998644  23334467789999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||+++++|.+++... ...+++..+..++.||+.||+|||++|++||+
T Consensus       107 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d  155 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD  155 (319)
T ss_dssp             ECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            99999999999999543 34689999999999999999999999999996

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=2.4e-19  Score=146.41  Aligned_cols=122  Identities=29%  Similarity=0.348  Sum_probs=99.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCCh-----hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK-----QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHML  185 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l  185 (235)
                      .+|.+.+.||+|+||.||++... ++..||+|.+.....     .....+.+|+.+++.++||||+++++++...+..++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            45667789999999999999763 588999999865321     112467899999999999999999999999999999


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++ +|.+++... ...+++..+..++.|++.||+|||++||+||+
T Consensus        90 v~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  137 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD  137 (346)
T ss_dssp             EEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
Confidence            9999986 898888543 34688889999999999999999999999996

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=3.3e-19  Score=144.06  Aligned_cols=122  Identities=25%  Similarity=0.358  Sum_probs=99.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe--CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccC---CCCCccceeeEEE-----eC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM--STGETVAVKVLATD--SKQGEKEFQTEVMLLGRL---HHRNLVNLVGYCA-----EK  180 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~~  180 (235)
                      +|.+.+.||+|+||.||++..  .++..||+|.+...  .......+.+|+.+++.+   +||||+++++++.     ..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   91 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   91 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence            456678999999999999976  45778999998643  222223566777766655   8999999999986     45


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...+++|||++ |+|.+++.......+++..+..++.||+.||+|||++||+||+
T Consensus        92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~d  145 (326)
T 1blx_A           92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD  145 (326)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            67899999998 6999999765555689999999999999999999999999996

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.78  E-value=5.4e-19  Score=143.24  Aligned_cols=124  Identities=23%  Similarity=0.392  Sum_probs=105.0

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CCCccceeeEEE--------eC
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGYCA--------EK  180 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~  180 (235)
                      ..++.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+..+..+. ||||+++++++.        ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            34567788999999999999975 468899999997766666678899999999995 999999999984        33


Q ss_pred             CEEEEEEEcccCCChhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      ...++++||++ |+|.+++.. .....+++..+..++.||+.||+|||+++  |+||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~D  163 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD  163 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEcc
Confidence            45789999996 699998854 22356999999999999999999999999  99996

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.78  E-value=1e-18  Score=139.47  Aligned_cols=120  Identities=17%  Similarity=0.150  Sum_probs=104.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+.....  ...+.+|+..+..+ +|+|++.+++++......+++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            3456778999999999999974 5788999999865432  23577899999999 899999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +++|.+++... ...+++..+..++.||+.||+|||++||+||+
T Consensus        88 ~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  131 (298)
T 1csn_A           88 L-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD  131 (298)
T ss_dssp             C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             c-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            9 99999999653 24589999999999999999999999999996

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.78  E-value=3.5e-19  Score=150.92  Aligned_cols=118  Identities=22%  Similarity=0.250  Sum_probs=99.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~  183 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++...      ...
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            456678899999999999964 46789999999754  444556788999999999999999999999654      457


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++ +|.+.+..    .+++..+..++.||+.||+|||++||+||+
T Consensus       143 ~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrD  189 (464)
T 3ttj_A          143 YLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRD  189 (464)
T ss_dssp             EEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999999976 57777632    389999999999999999999999999996

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.78  E-value=1.1e-18  Score=140.37  Aligned_cols=121  Identities=16%  Similarity=0.183  Sum_probs=105.8

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCC--CCCccceeeEEEeCCEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..|.+.+.||+|+||.||++...++..+|+|.+...  .......+.+|+.++..++  ||||+++++++...+..+++|
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            445667899999999999998878899999999754  3445567899999999996  599999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      | +.+++|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       108 e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  152 (313)
T 3cek_A          108 E-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSD  152 (313)
T ss_dssp             C-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             e-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            9 5678999999654  4689999999999999999999999999996

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.78  E-value=3.8e-19  Score=141.45  Aligned_cols=122  Identities=29%  Similarity=0.405  Sum_probs=96.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC--CCC--EEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS--TGE--TVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      .+|.+.+.||+|+||.||++.+.  ++.  .|++|.+...   .....+.+.+|+.+++.++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            45677789999999999999752  233  6899998654   2344567899999999999999999999987765 78


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+++++|.+++... ...+++..+..++.||+.||+|||+++++||+
T Consensus        97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  146 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD  146 (291)
T ss_dssp             EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999999643 24589999999999999999999999999996

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.78  E-value=4.8e-19  Score=145.83  Aligned_cols=120  Identities=28%  Similarity=0.315  Sum_probs=94.7

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQ  182 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~  182 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            3456678899999999999964 56789999998653  334456788999999999999999999998653      56


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++++|++ +++|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus       109 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~D  157 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRD  157 (367)
T ss_dssp             CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            79999999 6799998843   4589999999999999999999999999996

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.78  E-value=1.1e-18  Score=143.82  Aligned_cols=118  Identities=21%  Similarity=0.240  Sum_probs=100.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~  183 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...+      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  105 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  105 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred             heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence            456678899999999999964 46789999999754  3344567889999999999999999999997654      78


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++ +|.+++..    .+++..+..++.||+.||+|||++||+||+
T Consensus       106 ~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  152 (371)
T 2xrw_A          106 YIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRD  152 (371)
T ss_dssp             EEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            999999975 88888842    388999999999999999999999999996

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.78  E-value=3e-19  Score=141.94  Aligned_cols=124  Identities=20%  Similarity=0.253  Sum_probs=99.8

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHH-HHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKE-FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~-~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      ..++.+.+.||+|+||.||++.. .++..+|+|.+... ....... +..+...++.++||||+++++++.+.+..+++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            34566778999999999999975 56889999999755 2222233 444445588889999999999999999999999


Q ss_pred             EcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          188 VFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      ||+++ +|.+++..  .....+++..+..++.|++.||+|||++ |++||+
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~d  135 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD  135 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCC
Confidence            99974 88877743  2345699999999999999999999998 999996

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=2.6e-19  Score=148.32  Aligned_cols=128  Identities=22%  Similarity=0.271  Sum_probs=105.2

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC--------CCCccceeeE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH--------HRNLVNLVGY  176 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~  176 (235)
                      ..++...+|.+.+.||+|+||.||++.. .++..||+|.+... ....+.+.+|+.+++.++        |+||+++++.
T Consensus        31 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~  109 (397)
T 1wak_A           31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD  109 (397)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred             hhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence            3444456677889999999999999964 46789999998643 334567889999988885        7889999999


Q ss_pred             EE----eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          177 CA----EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       177 ~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      +.    .....++||||+ +++|.+++.......+++..+..++.||+.||+|||++ ||+||+
T Consensus       110 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrD  172 (397)
T 1wak_A          110 FKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTD  172 (397)
T ss_dssp             EEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCC
T ss_pred             eeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            87    445789999999 66777777655556799999999999999999999998 999996

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.77  E-value=1.1e-18  Score=141.55  Aligned_cols=123  Identities=20%  Similarity=0.353  Sum_probs=105.1

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe--CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCC------CccceeeEEEeCCE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM--STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR------NLVNLVGYCAEKGQ  182 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~~~  182 (235)
                      ..+|.+.+.||+|+||.||++..  .++..||+|.+... ....+.+.+|+.++..++|+      +++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            34667788999999999999975  35788999998643 33455788899888887665      49999999999999


Q ss_pred             EEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          183 HMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       183 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++|||+ +++|.+++......++++..+..++.||+.||+|||++||+||+
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  143 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTD  143 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            99999999 88999999766555789999999999999999999999999996

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.77  E-value=1e-18  Score=143.67  Aligned_cols=119  Identities=22%  Similarity=0.250  Sum_probs=102.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+... .....+.+.+|+.++..++||||+++++++...     ...++
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            456778999999999999965 46778999999754 344456789999999999999999999998654     36899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||++ |+|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus       108 v~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  153 (364)
T 3qyz_A          108 VQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRD  153 (364)
T ss_dssp             EEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999997 499999854   3489999999999999999999999999996

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.77  E-value=1.3e-19  Score=149.58  Aligned_cols=121  Identities=21%  Similarity=0.214  Sum_probs=95.3

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHH---HHHccCCCCCcccee-------eEEEe
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEV---MLLGRLHHRNLVNLV-------GYCAE  179 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~~  179 (235)
                      +.+.+.||+|+||.||++.. .+++.||||.+...   .....+.+.+|+   ..++.++||||++++       +++.+
T Consensus        75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~  154 (377)
T 3byv_A           75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  154 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred             EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence            44568899999999999975 46899999999743   334556789999   556666899999998       66554


Q ss_pred             CC-----------------EEEEEEEcccCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KG-----------------QHMLVYVFMSKGSLASHLYDEN-----YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~-----------------~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+                 ..+++|||+ +|+|.+++....     ...+++..+..++.||+.||+|||++||+||+
T Consensus       155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  231 (377)
T 3byv_A          155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  231 (377)
T ss_dssp             TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            43                 278999999 679999996421     11233577888999999999999999999996

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.77  E-value=9.9e-19  Score=142.85  Aligned_cols=119  Identities=20%  Similarity=0.264  Sum_probs=101.9

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l  185 (235)
                      .|.+.+.||+|+||.||++... ++..||+|.+... .......+.+|+.+++.++||||+++++++...     ...++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l   91 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI   91 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence            3556788999999999999764 5789999999654 334456788999999999999999999987654     67899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||++ |+|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus        92 v~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~D  137 (353)
T 2b9h_A           92 IQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRD  137 (353)
T ss_dssp             EECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999997 599999854   3589999999999999999999999999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.77  E-value=1.7e-18  Score=145.42  Aligned_cols=122  Identities=20%  Similarity=0.303  Sum_probs=103.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC------CCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL------HHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~~  184 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+... ......+.+|+.++..+      +|+||+.+++.+...+..+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            4567789999999999999965 45789999999643 33344667777776665      6789999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+. ++|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  225 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCD  225 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSC
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9999996 5999999776656799999999999999999999999999996

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.77  E-value=1.9e-18  Score=143.95  Aligned_cols=116  Identities=21%  Similarity=0.289  Sum_probs=90.7

Q ss_pred             hhccCCCCceeEEEEEeC---CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEEEccc
Q 026630          117 TTLIGQGAFGPVYKAQMS---TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVYVFMS  191 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~  191 (235)
                      .++||+|+||.||++...   ++..+|+|.+....  ....+.+|+.+++.++||||+++++++..  ....++||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            357999999999999854   57789999986442  22467899999999999999999999954  678999999997


Q ss_pred             CCChhhhhhc-------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYD-------ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~-------~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +|.+++..       .....+++..+..++.||+.||+|||+++|+||+
T Consensus       104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~D  153 (405)
T 3rgf_A          104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRD  153 (405)
T ss_dssp             E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCC
Confidence            5 88888742       1223489999999999999999999999999996

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.77  E-value=3.6e-18  Score=138.91  Aligned_cols=117  Identities=20%  Similarity=0.269  Sum_probs=94.8

Q ss_pred             hhhh-hccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHH-HHHccCCCCCccceeeEEEe----CCEEEEE
Q 026630          114 CNFT-TLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEV-MLLGRLHHRNLVNLVGYCAE----KGQHMLV  186 (235)
Q Consensus       114 ~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~----~~~~~lv  186 (235)
                      |.+. +.||+|+||.||++... +++.||+|.+.... .    ...|+ ..+..++||||+++++++..    ....++|
T Consensus        30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  104 (336)
T 3fhr_A           30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII  104 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence            4443 46999999999999764 68899999986432 1    22233 33556699999999999865    4458999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++.......+++.++..++.||+.||+|||++||+||+
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~d  153 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD  153 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999765555799999999999999999999999999996

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.76  E-value=1.6e-18  Score=142.93  Aligned_cols=118  Identities=27%  Similarity=0.353  Sum_probs=100.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE------
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH------  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~------  183 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++...+..      
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  122 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  122 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence            455678899999999999965 46789999999754  334456788999999999999999999999776544      


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||++ ++|.+++.    ..+++..+..++.||+.||+|||++||+||+
T Consensus       123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  169 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD  169 (371)
T ss_dssp             EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            99999997 58888872    2389999999999999999999999999996

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.76  E-value=1.7e-18  Score=141.72  Aligned_cols=118  Identities=27%  Similarity=0.355  Sum_probs=99.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCE------E
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ------H  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~  183 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++.....      .
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            355668899999999999975 46889999999654  33345678899999999999999999999976543      4


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||++ ++|.+++.    ..+++..+..++.||+.||+|||++||+||+
T Consensus       105 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~d  151 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD  151 (353)
T ss_dssp             EEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             EEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            89999997 58888873    2489999999999999999999999999996

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.76  E-value=2.1e-19  Score=144.51  Aligned_cols=127  Identities=21%  Similarity=0.302  Sum_probs=97.8

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChh------cHHHHHHHHHHHccC----CCCCccceee
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ------GEKEFQTEVMLLGRL----HHRNLVNLVG  175 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~  175 (235)
                      .+....+|.+.+.||+|+||.||++.. .++..||+|.+......      ....+.+|+..+..+    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            345566788889999999999999975 46789999999654221      222456788888887    8999999999


Q ss_pred             EEEeCCEEEEEEEc-ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          176 YCAEKGQHMLVYVF-MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       176 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++...+..++++|+ +.+++|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  164 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRD  164 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            99888889999999 7899999999653  4589999999999999999999999999996

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.76  E-value=2.7e-19  Score=156.28  Aligned_cols=124  Identities=23%  Similarity=0.304  Sum_probs=105.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe------CCEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE------KGQH  183 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~  183 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+... .......+.+|+.+++.++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            4677889999999999999965 46889999998754 44556679999999999999999999998754      5677


Q ss_pred             EEEEEcccCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++||+||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrD  146 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRD  146 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            99999999999999996532 23588889999999999999999999999996

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.75  E-value=1.2e-18  Score=146.37  Aligned_cols=118  Identities=18%  Similarity=0.150  Sum_probs=97.0

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      ++...+.||+|+||.|+.....+++.||||.+......   .+.+|+.+++.+ +||||+++++.+.+....+++|||++
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            34556789999999976555558899999998654322   346899999998 89999999999999999999999996


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       |+|.+++.... ..+.......++.||+.||+|||+++|+||+
T Consensus       102 -g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  143 (432)
T 3p23_A          102 -ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRD  143 (432)
T ss_dssp             -EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             -CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCC
Confidence             59999996543 3345556678999999999999999999996

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.75  E-value=8.4e-18  Score=136.44  Aligned_cols=117  Identities=28%  Similarity=0.447  Sum_probs=94.5

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHH--HccCCCCCccceeeEEEe-----CCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML--LGRLHHRNLVNLVGYCAE-----KGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~-----~~~~~  184 (235)
                      .++.+.+.||+|+||.||++.. ++..||+|.+....   ...+..|..+  +..++||||+++++.+..     ....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            3456678999999999999987 78899999997443   2344444444  556899999999986532     23678


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG---------VSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~---------~ivHr~  235 (235)
                      +||||+++|+|.+++...   ..++.....++.||+.||+|||++         +|+||+
T Consensus        89 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~D  145 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD  145 (336)
T ss_dssp             EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSS
T ss_pred             EEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecc
Confidence            999999999999999553   358889999999999999999999         999996

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.75  E-value=3.7e-18  Score=142.96  Aligned_cols=118  Identities=25%  Similarity=0.343  Sum_probs=95.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l  185 (235)
                      .|.+.+.||+|+||.||++.. .++..||||.+.....    .+.+|+.+++.++||||+++++++...      ...++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            356678899999999999976 4588999999865432    224799999999999999999988432      24678


Q ss_pred             EEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||+++ +|.+.+..  .....+++..+..++.||+.||+|||++||+||+
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  181 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD  181 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999986 66666532  2335689999999999999999999999999996

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.75  E-value=1e-17  Score=133.40  Aligned_cols=119  Identities=20%  Similarity=0.305  Sum_probs=100.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEE-EeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC-AEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+......  ..+.+|+.++..++|++++..+..+ ...+..+++|||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            456678899999999999975 57889999998755322  3588999999999888877766665 5677889999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  130 (296)
T 3uzp_A           88 -GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  130 (296)
T ss_dssp             -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             -CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence             89999999643 34689999999999999999999999999996

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.75  E-value=3.4e-18  Score=139.51  Aligned_cols=126  Identities=18%  Similarity=0.340  Sum_probs=104.6

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeC-CC-CEEEEEEeecCChhcHHHHHHHHHHHccCCCCC------ccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMS-TG-ETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN------LVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~  179 (235)
                      +....+|.+.+.||+|+||.||++... ++ ..||+|.+... ......+.+|+.+++.++|++      ++.+.+++..
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            334456778899999999999999753 34 68999998643 334557788999988887665      8899999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+..+++|||+ +++|.+++.......+++..+..++.||+.||+|||++||+||+
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~D  148 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTD  148 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            99999999999 66888888665556799999999999999999999999999996

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.74  E-value=3.7e-18  Score=143.55  Aligned_cols=115  Identities=19%  Similarity=0.135  Sum_probs=92.8

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .+.||+|+||.||.+...+++.||||.+...   ..+.+.+|+.++..+ +||||+++++.+.+.+..+++|||++ |+|
T Consensus        20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL   95 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL   95 (434)
T ss_dssp             EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred             cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence            4779999999998776568999999998643   234578899999876 89999999999999999999999996 699


Q ss_pred             hhhhhcCCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          196 ASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       196 ~~~l~~~~~~~-----~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+++.......     .++..+..++.||+.||+|||+++|+||+
T Consensus        96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  140 (434)
T 2rio_A           96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRD  140 (434)
T ss_dssp             HHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccC
Confidence            99996532111     12234578999999999999999999996

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.74  E-value=1.5e-18  Score=142.70  Aligned_cols=125  Identities=21%  Similarity=0.301  Sum_probs=105.0

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-----------CCCccceeeE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-----------HRNLVNLVGY  176 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~  176 (235)
                      +...+|.+.+.||+|+||.||++.. .++..||+|.+... ......+.+|+.++..++           ||||+++++.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            3445677889999999999999975 56789999998643 334456788998888775           8999999999


Q ss_pred             EEeCC----EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          177 CAEKG----QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       177 ~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      +...+    ..+++|||+ +++|.+++.......+++..+..++.||+.||+|||++ ||+||+
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~D  157 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD  157 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSC
T ss_pred             hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence            87543    788999999 88999999765556699999999999999999999998 999996

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.74  E-value=3.5e-18  Score=141.95  Aligned_cols=118  Identities=22%  Similarity=0.340  Sum_probs=94.3

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv  186 (235)
                      +|.+.+.||+|+||.||++....+..+|+|.+......    ..+|+.+++.++||||+++++++...+      ..++|
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv  116 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV  116 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence            45677899999999999998867777999988654322    236999999999999999999985433      37899


Q ss_pred             EEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||++++ +...+..  .....+++..+..++.||+.||+|||++||+||+
T Consensus       117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  166 (394)
T 4e7w_A          117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRD  166 (394)
T ss_dssp             EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            9999874 4333321  2235689999999999999999999999999996

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.74  E-value=1e-17  Score=133.34  Aligned_cols=120  Identities=20%  Similarity=0.302  Sum_probs=98.3

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEE-EeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC-AEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~  189 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+......  ..+.+|+.++..++|++++..+..+ ...+..+++|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            4567788999999999999974 57789999987654222  2477899999999888877777666 667788999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      + +++|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D  130 (296)
T 4hgt_A           87 L-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  130 (296)
T ss_dssp             C-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             c-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            9 89999999643 34589999999999999999999999999996

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.74  E-value=1.3e-17  Score=134.98  Aligned_cols=123  Identities=19%  Similarity=0.227  Sum_probs=100.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHH-HHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVM-LLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .++.+.+.||+|+||.||++.. .++..||+|.+... .......+..|+. +++.++||||+++++++...+..+++||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            3455678899999999999976 46889999999765 3334445666666 6778899999999999999999999999


Q ss_pred             cccCCChhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          189 FMSKGSLASHLYD---ENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      |+++ +|.+++..   .....+++..+..++.|++.||.|||++ |++||+
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~d  151 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRD  151 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSC
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECC
Confidence            9985 88777642   2245689999999999999999999999 999996

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.73  E-value=1.2e-18  Score=140.85  Aligned_cols=126  Identities=20%  Similarity=0.283  Sum_probs=105.0

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh------hcHHHHHHHHHHHccCC--CCCccceeeEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK------QGEKEFQTEVMLLGRLH--HRNLVNLVGYCA  178 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~~~~~~~  178 (235)
                      +....+|.+.+.||+|+||.||++.. .++..||+|.+.....      .....+.+|+.+++.++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34455677789999999999999964 5678999999975421      12235678899999885  699999999999


Q ss_pred             eCCEEEEEEEcccC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSK-GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+..++++|++.+ ++|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  174 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRD  174 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCC
Confidence            99999999999976 8999999643  4689999999999999999999999999996

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=134.71  Aligned_cols=121  Identities=18%  Similarity=0.252  Sum_probs=90.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCC-hhcHHH-HHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDS-KQGEKE-FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~-~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ++.+.+.||+|+||.||++... ++..||+|.+.... ...... +..+..+++.++||||+++++++...+..+++|||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~  105 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL  105 (318)
T ss_dssp             GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence            4556788999999999999764 68899999997652 222233 34444567888999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG-VSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~ivHr~  235 (235)
                      + ++.+..+. ......+++..+..++.|++.||+|||++ |++||+
T Consensus       106 ~-~~~~~~l~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d  150 (318)
T 2dyl_A          106 M-GTCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRD  150 (318)
T ss_dssp             C-SEEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred             c-CCcHHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCC
Confidence            9 44444444 32235689999999999999999999995 999996

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.73  E-value=3.4e-17  Score=139.21  Aligned_cols=119  Identities=21%  Similarity=0.253  Sum_probs=98.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC-CCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH-RNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .|.+.+.||+|+||.||++.. .++..||||.+......  ..+..|+.++..++| +++..+..++...+..+++|||+
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            456778999999999999975 56889999988654322  247889999999976 55555555667788899999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +++|.+++... ...+++..++.++.||+.||+|||+++||||+
T Consensus        86 -g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD  128 (483)
T 3sv0_A           86 -GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRD  128 (483)
T ss_dssp             -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             -CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence             89999999643 35699999999999999999999999999996

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.72  E-value=2.2e-17  Score=135.22  Aligned_cols=126  Identities=24%  Similarity=0.263  Sum_probs=89.9

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC-----
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG-----  181 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----  181 (235)
                      .....+|.+.+.||+|+||.||++.. .++..||+|.+.... .....+..++..+..++||||+++++++...+     
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            34445677788999999999999976 468899999986542 22335667888888899999999999986533     


Q ss_pred             --EEEEEEEcccCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCccccC
Q 026630          182 --QHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLH--DGVSCHLF  235 (235)
Q Consensus       182 --~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~~qi~~gl~yLH--~~~ivHr~  235 (235)
                        ..+++|||+++ +|...+..  .....+++..+..++.|++.||.|||  ++||+||+
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~D  156 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRD  156 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSC
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCc
Confidence              27899999986 55544432  33456889999999999999999999  99999996

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.72  E-value=7e-18  Score=138.98  Aligned_cols=119  Identities=12%  Similarity=0.006  Sum_probs=82.6

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---hcHHHHHHHH---HHHccCCCCCcccee-------eEEEe
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK---QGEKEFQTEV---MLLGRLHHRNLVNLV-------GYCAE  179 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~~  179 (235)
                      +.+.+.||+|+||.||++.. .++..||+|.+.....   ...+.+.+|+   ..+.. +||||++++       +.+..
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence            45678899999999999975 4678999999986532   3344667775   45555 799977744       44433


Q ss_pred             C-----------------CEEEEEEEcccCCChhhhhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCccccC
Q 026630          180 K-----------------GQHMLVYVFMSKGSLASHLYDENYGPLTWNLR------VHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~------~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .                 ...++||||++ |+|.+++.... ..+.+..+      ..++.||+.||+|||++||+||+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD  219 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH  219 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence            2                 33799999999 89999996431 22344445      67889999999999999999996

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.70  E-value=2.4e-17  Score=142.02  Aligned_cols=108  Identities=14%  Similarity=0.124  Sum_probs=84.7

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCCh--------hcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK--------QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .+.||+|+||.||++.. .+..+++|.......        ...+.+.+|+.++++++||||+++..++...+..+++||
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            46799999999999965 678889998643311        113458999999999999999977777767777899999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|.+++..          +..++.|++.||+|||+++|+||+
T Consensus       420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrD  456 (540)
T 3en9_A          420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHND  456 (540)
T ss_dssp             CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTT
T ss_pred             CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCC
Confidence            9999999999943          468999999999999999999996

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.70  E-value=7e-17  Score=133.50  Aligned_cols=122  Identities=28%  Similarity=0.331  Sum_probs=101.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-CC-----CccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HR-----NLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~  184 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.+... ......+..|+.++..++ |+     +++.+.+.+...+..+
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  132 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC  132 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence            4566778999999999999975 35778999999643 333456677888877774 44     4999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH--DGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH--~~~ivHr~  235 (235)
                      +||||++ |+|.+++.......+++..+..++.|++.||+|||  +.||+||+
T Consensus       133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrD  184 (382)
T 2vx3_A          133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCD  184 (382)
T ss_dssp             EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCC
T ss_pred             EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCC
Confidence            9999996 59999997765567999999999999999999999  57899996

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.70  E-value=4e-17  Score=141.38  Aligned_cols=111  Identities=16%  Similarity=0.064  Sum_probs=84.9

Q ss_pred             cCCCCceeEEEE-EeCCCCEEEEEEeecCC----------hhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEE
Q 026630          120 IGQGAFGPVYKA-QMSTGETVAVKVLATDS----------KQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       120 lg~G~~g~v~~~-~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+.|..|....+ .+-.|..+++|.+....          ....++|.+|+.+|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            444555444333 22357889999996541          22345799999999999 7999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||++|++|.++|...  ++++..   .++.||+.||+|||++||||||
T Consensus       322 Eyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRD  364 (569)
T 4azs_A          322 EKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDD  364 (569)
T ss_dssp             ECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESC
T ss_pred             ecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceecc
Confidence            999999999999643  557654   4789999999999999999997

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.65  E-value=1.4e-16  Score=126.47  Aligned_cols=106  Identities=11%  Similarity=0.048  Sum_probs=84.0

Q ss_pred             hhccCCCCceeEEEEEeCCCCEEEEEEeecCCh------------------hcHHHHHHHHHHHccCCCCCccceeeEEE
Q 026630          117 TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK------------------QGEKEFQTEVMLLGRLHHRNLVNLVGYCA  178 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~~~~~~~  178 (235)
                      .+.||+|+||.||++...++..+|+|.++....                  .....+.+|+.+++.++  | +++.+++.
T Consensus        95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            478999999999999887788999999864321                  12456899999999998  4 66666554


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      . +..++||||+++|+|.+ +..        .....++.|++.||+|||++||+||+
T Consensus       172 ~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrD  218 (282)
T 1zar_A          172 W-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGD  218 (282)
T ss_dssp             E-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             c-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCC
Confidence            4 45689999999999988 511        12356999999999999999999996

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.55  E-value=5e-15  Score=123.68  Aligned_cols=120  Identities=23%  Similarity=0.218  Sum_probs=85.6

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCC-CCc---------cceeeE----
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHH-RNL---------VNLVGY----  176 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h-~ni---------v~~~~~----  176 (235)
                      ...+.||+|+||.||++.. .+++.||||.+...   .....+.+.+|+.++..++| .|.         +.....    
T Consensus        81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  160 (413)
T 3dzo_A           81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP  160 (413)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred             EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence            3457899999999999974 56899999998743   22335678999999999876 211         111111    


Q ss_pred             --------EEe-----CCEEEEEEEcccCCChhhhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 --------CAE-----KGQHMLVYVFMSKGSLASHLY-----DENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 --------~~~-----~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                              +..     ....+++|+++ +++|.+++.     ......+++..++.++.||+.||+|||+++|+||+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD  236 (413)
T 3dzo_A          161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  236 (413)
T ss_dssp             C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                    111     12356667665 679998884     22334577888999999999999999999999996

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.51  E-value=8.4e-15  Score=114.74  Aligned_cols=113  Identities=19%  Similarity=0.123  Sum_probs=81.2

Q ss_pred             hhhccCCCCceeEEEEEe-CCCCE--EEEEEeecCChh------------------------cHHHHHHHHHHHccCCCC
Q 026630          116 FTTLIGQGAFGPVYKAQM-STGET--VAVKVLATDSKQ------------------------GEKEFQTEVMLLGRLHHR  168 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~h~  168 (235)
                      +.+.||+|+||.||++.. .+|..  ||||.++.....                        ....+.+|+..+..+.|+
T Consensus        51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~  130 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA  130 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence            457899999999999976 67888  999987543111                        113578999999999888


Q ss_pred             CccceeeEEEeCCEEEEEEEcccC-C----ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCccccC
Q 026630          169 NLVNLVGYCAEKGQHMLVYVFMSK-G----SLASHLYDENYGPLTWNLRVHIALDVARGLEYLH-DGVSCHLF  235 (235)
Q Consensus       169 niv~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH-~~~ivHr~  235 (235)
                      ++.....+..  ...++||||+.+ |    +|.++...     .++.....++.|++.||.||| ++||+||+
T Consensus       131 ~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrD  196 (258)
T 1zth_A          131 GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHAD  196 (258)
T ss_dssp             TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSS
T ss_pred             CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            6532222222  245899999942 4    56555421     223456789999999999999 99999996

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.40  E-value=5.2e-14  Score=115.42  Aligned_cols=112  Identities=11%  Similarity=0.027  Sum_probs=77.0

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCC--------------hhcHH--------HHHHHHHHHccCCCCCcc
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDS--------------KQGEK--------EFQTEVMLLGRLHHRNLV  171 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------------~~~~~--------~~~~e~~~l~~l~h~niv  171 (235)
                      +.+.+.||+|+||.||+|...+|+.||||.++...              .....        ...+|...|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            34567899999999999988889999999875320              00011        123466666666555443


Q ss_pred             ceeeEEEeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       172 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ...-+....  .++||||+++++|..+...        .....++.|++.+|.|||++|||||+
T Consensus       177 vp~p~~~~~--~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~gIVHrD  230 (397)
T 4gyi_A          177 VPEPIAQSR--HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHGLIHGD  230 (397)
T ss_dssp             CCCEEEEET--TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCeeeeccC--ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            222222222  3699999999888765411        12356789999999999999999996

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.70  E-value=3.7e-08  Score=76.75  Aligned_cols=107  Identities=12%  Similarity=0.012  Sum_probs=81.4

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.+...++.|+.+.||+... .+..+++|..+.........+.+|..++..+ .+..++++++.+...+..+++|||++|
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   94 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             ceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence            34456677788889999976 4688999998753212223578899888887 467888999999888899999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD  228 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  228 (235)
                      .+|.+.+.       +......++.+++.+|+.||+
T Consensus        95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             eehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            99877641       112234788999999999998

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.28  E-value=2.6e-06  Score=69.38  Aligned_cols=107  Identities=15%  Similarity=0.245  Sum_probs=77.3

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEee--cCC-hhcHHHHHHHHHHHccCC--CCCccceeeEEEeC---CEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLA--TDS-KQGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEK---GQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e~  189 (235)
                      +.++.|.++.+|+.... +..+++|..+  ... ......+.+|..++..+.  +..++++++.+.+.   +..++||||
T Consensus        44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            46899999999999874 5678888775  332 122346778999888885  45678888888765   447899999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG  229 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  229 (235)
                      +++..+.+..    ...++..+...++.+++..|+.||+.
T Consensus       123 v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~  158 (359)
T 3dxp_A          123 VSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTV  158 (359)
T ss_dssp             CCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9998775422    13367888889999999999999974

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.17  E-value=8.2e-06  Score=62.96  Aligned_cols=97  Identities=16%  Similarity=0.109  Sum_probs=70.4

Q ss_pred             CCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC--ccceeeEEEeCCEEEEEEEcccCCChhhh
Q 026630          121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN--LVNLVGYCAEKGQHMLVYVFMSKGSLASH  198 (235)
Q Consensus       121 g~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~  198 (235)
                      +.|..+.||+....++..+++|......   ...+..|..+++.+.+.+  ++++++.....+..+++|||+++.+|.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            3556689999987667789999976442   235678888888874434  566888877777789999999998884  


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          199 LYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       199 l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      . ..    .+   ...++.+++..|+.||+..
T Consensus       104 ~-~~----~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A          104 S-SH----LA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             T-SC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred             c-Cc----CC---HhHHHHHHHHHHHHHhCCC
Confidence            2 11    22   2367788899999999764

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=97.68  E-value=2.6e-05  Score=42.19  Aligned_cols=30  Identities=17%  Similarity=0.285  Sum_probs=15.8

Q ss_pred             ccceeehhHHHHHHHHHHHHHHHHhhhhhc
Q 026630            6 SGLIIGISIGVVIGVLLAISALFCFRYHRK   35 (235)
Q Consensus         6 ~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~   35 (235)
                      .+.|+++++|++++++++++++++++||+.
T Consensus        11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~   40 (44)
T 2jwa_A           11 LTSIISAVVGILLVVVLGVVFGILIKRRQQ   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhheehhhh
Confidence            355788888855444444444444444433

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=97.68  E-value=5.9e-05  Score=40.97  Aligned_cols=32  Identities=16%  Similarity=0.118  Sum_probs=14.2

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHhhhhhc
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCFRYHRK   35 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~   35 (235)
                      ++.+.|++.++|.+++++++++++++|.+||+
T Consensus         8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~   39 (44)
T 2ks1_B            8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRH   39 (44)
T ss_dssp             SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCcceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence            34455555555544444444433333333333

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=97.65  E-value=4.6e-05  Score=41.28  Aligned_cols=32  Identities=13%  Similarity=0.131  Sum_probs=14.1

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHhhhhhc
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCFRYHRK   35 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~~~~r~   35 (235)
                      +..+.|++.++|.+++++++++++++|.+||+
T Consensus         7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr   38 (44)
T 2l2t_A            7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKS   38 (44)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCcceEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence            34455555555544444444433333333333

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=97.31  E-value=0.00011  Score=38.72  Aligned_cols=30  Identities=23%  Similarity=0.459  Sum_probs=20.9

Q ss_pred             CCCccceeehhHHHHHHHHHHHHHHHHhhh
Q 026630            3 GESSGLIIGISIGVVIGVLLAISALFCFRY   32 (235)
Q Consensus         3 ~~~~~~i~~i~~g~~~~~~~~~~~~~~~~~   32 (235)
                      +.+.+.|++|++|+++++.+++.+++++++
T Consensus         7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            7 GLTGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            345688999999988887666555554433

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.16  E-value=0.0036  Score=49.84  Aligned_cols=94  Identities=18%  Similarity=0.151  Sum_probs=70.7

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC---CCCccceeeEEEeCCEEEEEEEcccCCC
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH---HRNLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      +.|+.|....+|+... ++..+++|..+..   ....+..|...|+.+.   ...++++++.....+..+++|||+++..
T Consensus        42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~  117 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK  117 (312)
T ss_dssp             EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred             EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence            3578899999999876 5678888987643   2456788888887772   3668888888877788999999999865


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      +..                ..+.++.+.|+-||+...
T Consensus       118 ~~~----------------~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          118 NKQ----------------SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCT----------------THHHHHHHHHHHHHHCCC
T ss_pred             CCc----------------hhHHHHHHHHHHHHcCCC
Confidence            410                245678888999998653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.02  E-value=0.005  Score=48.78  Aligned_cols=103  Identities=19%  Similarity=0.148  Sum_probs=74.3

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCC---CccceeeEEE-eCCEEEEEEEcccCC
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR---NLVNLVGYCA-EKGQHMLVYVFMSKG  193 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~g  193 (235)
                      +.++.|....+|+.    +..+++|..+  .......+..|..++..+.+.   .++..+.... ..+..+++|||++|.
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            34677877788877    4667788743  223345788999999888542   3556666654 345578999999998


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      ++......    .++..+...++.+++..|+.||+..
T Consensus        99 ~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~  131 (306)
T 3tdw_A           99 ILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFP  131 (306)
T ss_dssp             ECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            88764322    2577788899999999999999865

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.75  E-value=0.0034  Score=50.66  Aligned_cols=113  Identities=6%  Similarity=0.008  Sum_probs=75.0

Q ss_pred             hcc-CCCCceeEEEEEeC-------CCCEEEEEEeecCC---hhcHHHHHHHHHHHccCC-C--CCccceeeEEEeC---
Q 026630          118 TLI-GQGAFGPVYKAQMS-------TGETVAVKVLATDS---KQGEKEFQTEVMLLGRLH-H--RNLVNLVGYCAEK---  180 (235)
Q Consensus       118 ~~l-g~G~~g~v~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~---  180 (235)
                      +.| +.|....+|+....       ++..+++|......   ......+.+|..+++.+. +  ..++++++.+.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 78888899988653       25678888765432   101235677888777773 2  3567777776554   


Q ss_pred             CEEEEEEEcccCCChhhhhh----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          181 GQHMLVYVFMSKGSLASHLY----DENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +..+++|||+++..+.+.+.    +.....++..+...++.++++.|+-||+..
T Consensus       106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            34689999999977765421    011113566677788999999999999764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.71  E-value=0.0086  Score=46.18  Aligned_cols=102  Identities=15%  Similarity=0.069  Sum_probs=72.1

Q ss_pred             cCCCCce-eEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          120 IGQGAFG-PVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       120 lg~G~~g-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      +..|..+ .||+-... .+..+.+|.-+..   ....+.+|...++.+ .+-.++++++.+.+.+..++|||++++.++.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            4445444 58877643 4567888887543   234677888888776 3445778888888889999999999998887


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +....      .......++.+++..|+-||+..
T Consensus       109 ~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A          109 QVLEE------YPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             HHHHH------CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             ccccC------CHHHHHHHHHHHHHHHHHhcCCC
Confidence            76522      12234567888999999999754

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.67  E-value=0.0046  Score=48.79  Aligned_cols=103  Identities=19%  Similarity=0.176  Sum_probs=71.4

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCC--ccceeeEEEeCC---EEEEEEEccc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRN--LVNLVGYCAEKG---QHMLVYVFMS  191 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~~~~~~~~~~---~~~lv~e~~~  191 (235)
                      +.++.|....+|+..    ..+++|..+..  .....+.+|..++..+ .+..  ++..+......+   ..|+|||+++
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            447788888888753    45788876432  3345688999988877 4433  334444332322   3478999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      |.+|.....    ..++..+...++.+++..|+.||+..
T Consensus       100 G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~  134 (304)
T 3sg8_A          100 GVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSIN  134 (304)
T ss_dssp             CEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            988875442    23678888999999999999999754

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.64  E-value=0.013  Score=45.74  Aligned_cols=93  Identities=18%  Similarity=0.208  Sum_probs=62.0

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC-C--CccceeeEEEeCCEEEEEEEcccCCC
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH-R--NLVNLVGYCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~--niv~~~~~~~~~~~~~lv~e~~~~g~  194 (235)
                      +.+|.|..+.||+.+..+|+.+.+|..+.........|..|...|+.+.. .  .+++.++  .+.  .+++|||++.+.
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~~--~~lv~e~l~~~~   96 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG--WDD--RTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--EET--TEEEEECCCCCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe--ccC--ceEEEEeecccC
Confidence            55899999999999998999999998765544444467889888887732 2  2334443  333  368899987643


Q ss_pred             hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          195 LASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       195 L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      .            +..    .+.++...|+-||...
T Consensus        97 ~------------~~~----~~~~lg~~La~lH~~~  116 (288)
T 3f7w_A           97 P------------TPE----AAERFGHQLAAMHLAG  116 (288)
T ss_dssp             C------------CHH----HHHHHHHHHHHHHHTC
T ss_pred             C------------ChH----HHHHHHHHHHhhhhcc
Confidence            2            222    2345566777788653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.54  E-value=0.066  Score=43.76  Aligned_cols=101  Identities=14%  Similarity=0.050  Sum_probs=58.8

Q ss_pred             hccCCCCceeEEEEEeC-CCCEEEEEEeecCCh-------hcHHHHHHHHHHHccCCC--C-CccceeeEEEeCCEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMS-TGETVAVKVLATDSK-------QGEKEFQTEVMLLGRLHH--R-NLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~lv  186 (235)
                      +.+|.|.++.||++... .+..+++|.......       .....+..|..++..+..  + .++.++..  +.+..++|
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence            46899999999999643 467899998653211       122345678887776632  3 34455543  34456799


Q ss_pred             EEcccCCCh-hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 026630          187 YVFMSKGSL-ASHLYDENYGPLTWNLRVHIALDVARGLEYLH  227 (235)
Q Consensus       187 ~e~~~~g~L-~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH  227 (235)
                      ||++++... ...+....   ...    ..+.+++..|+-+|
T Consensus       114 mE~l~g~~~~~~~l~~~~---~~~----~~~~~l~~~La~lH  148 (397)
T 2olc_A          114 MEDLSHLKIARKGLIEGE---NYP----HLSQHIGEFLGKTL  148 (397)
T ss_dssp             ECCCTTSEEHHHHHHTTC---CCT----THHHHHHHHHHHHH
T ss_pred             EEeCCCcchHHHHHhcCC---cCH----HHHHHHHHHHHHHh
Confidence            999976433 33332211   111    23566677777777

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=94.56  E-value=0.028  Score=29.96  Aligned_cols=16  Identities=31%  Similarity=0.582  Sum_probs=7.6

Q ss_pred             eeehhHHHHHHHHHHH
Q 026630            9 IIGISIGVVIGVLLAI   24 (235)
Q Consensus         9 i~~i~~g~~~~~~~~~   24 (235)
                      +.+|+++++.++++++
T Consensus        12 ~~~I~~~vv~Gv~ll~   27 (41)
T 2k9y_A           12 NLAVIGGVAVGVVLLL   27 (41)
T ss_dssp             STHHHHHHHHHHHHHH
T ss_pred             eEEEEeehhHHHHHHH
Confidence            3445555555544333

>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1

Probab=94.49  E-value=0.0018  Score=33.04  Aligned_cols=24  Identities=21%  Similarity=0.433  Sum_probs=9.8

Q ss_pred             ceeehhHHHHHHHHHHHHHHHHhh
Q 026630            8 LIIGISIGVVIGVLLAISALFCFR   31 (235)
Q Consensus         8 ~i~~i~~g~~~~~~~~~~~~~~~~   31 (235)
                      .|++.++|+++++++++.+.++++
T Consensus         9 sIaagVvglll~vii~l~~~~~iR   32 (35)
T 1iij_A            9 FIIATVVGVLLFLILVVVVGILIK   32 (35)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTHHHH
T ss_pred             EeHHHHHHHHHHHHHHHHhheEEe
Confidence            345555553333333333333333

>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B

Probab=94.10  E-value=0.032  Score=28.14  Aligned_cols=28  Identities=25%  Similarity=0.472  Sum_probs=20.9

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHHhh
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFCFR   31 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~~~   31 (235)
                      .+.+.+++|++|.+++++++.+.++++.
T Consensus         4 L~~gaIaGIVvgdi~~t~~i~~~vy~~~   31 (33)
T 2l34_A            4 VSPGVLAGIVVGDLVLTVLIALAVYFLG   31 (33)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCcceEEeEeHHHHHHHHHHHHHHhhee
Confidence            4567888999998888877666666553

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=93.82  E-value=0.1  Score=28.19  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=29.1

Q ss_pred             cceeehhHHHHHHHHHHHHHHHHhhhhhcccCCC
Q 026630            7 GLIIGISIGVVIGVLLAISALFCFRYHRKRSQIG   40 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~~~~   40 (235)
                      ....+|+.|++.++++++++++.+....+|++..
T Consensus         8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B            8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            4567889999999999999999999999998864

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=93.34  E-value=0.1  Score=28.08  Aligned_cols=34  Identities=18%  Similarity=0.064  Sum_probs=20.1

Q ss_pred             cceeehhHHHHHHHHHHHHHHHHhhhhhcccCCC
Q 026630            7 GLIIGISIGVVIGVLLAISALFCFRYHRKRSQIG   40 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~~~~   40 (235)
                      +....|+.+++-+++++++.+.++.+.|+|++++
T Consensus         9 ~~~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~~   42 (44)
T 2jwa_A            9 SPLTSIISAVVGILLVVVLGVVFGILIKRRQQKI   42 (44)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHhheehhhhhc
Confidence            4444566666554444445555567788877753

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=93.29  E-value=0.14  Score=27.54  Aligned_cols=35  Identities=20%  Similarity=0.255  Sum_probs=27.8

Q ss_pred             cceeehhHHHHHHHHHHHHHHHHhhhhhcccCCCC
Q 026630            7 GLIIGISIGVVIGVLLAISALFCFRYHRKRSQIGN   41 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~~~~~~~~~~~~~r~r~~~~~   41 (235)
                      ....+|+.|++.++++++++++.+....+|++..+
T Consensus         7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A            7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             CCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            34557788888888888888988999999988653

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=92.74  E-value=0.035  Score=29.56  Aligned_cols=18  Identities=44%  Similarity=0.715  Sum_probs=8.5

Q ss_pred             cceeehhHHHHHHHH-HHHH
Q 026630            7 GLIIGISIGVVIGVL-LAIS   25 (235)
Q Consensus         7 ~~i~~i~~g~~~~~~-~~~~   25 (235)
                      .++.++++|+++ ++ +++.
T Consensus        14 ~I~~~vv~Gv~l-l~~iv~~   32 (41)
T 2k9y_A           14 AVIGGVAVGVVL-LLVLAGV   32 (41)
T ss_dssp             HHHHHHHHHHHH-HHHHHHH
T ss_pred             EEEeehhHHHHH-HHHHHHH
Confidence            344445555554 55 4433

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.42  E-value=0.021  Score=48.00  Aligned_cols=59  Identities=8%  Similarity=0.086  Sum_probs=16.7

Q ss_pred             hccCCCCceeEEEEEeCC-CCEEEE------EEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe
Q 026630          118 TLIGQGAFGPVYKAQMST-GETVAV------KVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE  179 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~  179 (235)
                      +.+|   ||.||+|.+.. ..+||+      |.....  .......|.+|..++..++|||+++.+++...
T Consensus       148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4555   99999998743 357888      666543  22334578889999999999999999887643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=92.05  E-value=0.8  Score=36.09  Aligned_cols=92  Identities=16%  Similarity=0.235  Sum_probs=49.8

Q ss_pred             ccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-----CCCCcccee-e--EEEeCCEEEEEEEcc
Q 026630          119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-----HHRNLVNLV-G--YCAEKGQHMLVYVFM  190 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~-~--~~~~~~~~~lv~e~~  190 (235)
                      .|+.|..+.+|+....++ .+++|..... .   ..+..|..++..+     ..|.++... |  +....+..++++||+
T Consensus        39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             ECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            455567889999877444 5888888642 1   2233344444333     234333311 1  123466788999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD  228 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  228 (235)
                      ++.++..         .+.    ..+.+++..|+-||.
T Consensus       114 ~G~~~~~---------~~~----~~~~~~g~~La~lH~  138 (346)
T 2q83_A          114 EGRPFEL---------TVK----QDLEFIMKGLADFHT  138 (346)
T ss_dssp             CCBCCCT---------TSH----HHHHHHHHHHHHHHH
T ss_pred             cCccCCC---------CCH----HHHHHHHHHHHHHHH
Confidence            9866531         122    234677777777885

>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}

Probab=91.68  E-value=0.25  Score=28.81  Aligned_cols=15  Identities=47%  Similarity=0.645  Sum_probs=8.0

Q ss_pred             hhHHHHHHHHHHHHH
Q 026630           12 ISIGVVIGVLLAISA   26 (235)
Q Consensus        12 i~~g~~~~~~~~~~~   26 (235)
                      |++|.++++++++.+
T Consensus        12 ivlGg~~~lll~~gl   26 (70)
T 2klu_A           12 IVLGGVAGLLLFIGL   26 (70)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHH
Confidence            566666655444443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=91.65  E-value=0.75  Score=37.46  Aligned_cols=98  Identities=14%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             ccCCCCceeEEEEEeC--------CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC-ccceeeEEEeCCEEEEEEEc
Q 026630          119 LIGQGAFGPVYKAQMS--------TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN-LVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+..|-...+|+....        ++..+++|..... ......+.+|..+++.+...+ .+++++.+.+    .+|+||
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~  131 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY  131 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence            4666777788988763        2467888875321 223456678988887773222 3555555432    389999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      +++..|..--       +..   ..+..++++.|+-||+..+
T Consensus       132 i~G~~l~~~~-------l~~---p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          132 IPSRPLKTQE-------LRE---PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             CSEEECCGGG-------GGC---HHHHHHHHHHHHHHHTCCC
T ss_pred             ecCccCChhH-------hCC---HHHHHHHHHHHHHHhCCCC
Confidence            9985553211       111   2456788999999998754

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=90.44  E-value=0.43  Score=26.89  Aligned_cols=8  Identities=50%  Similarity=0.949  Sum_probs=3.2

Q ss_pred             HHHHHHHH
Q 026630           14 IGVVIGVL   21 (235)
Q Consensus        14 ~g~~~~~~   21 (235)
                      ++++.+++
T Consensus        17 ~svl~GLl   24 (54)
T 2knc_A           17 VGVLGGLL   24 (54)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            33344443

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=90.05  E-value=0.5  Score=26.58  Aligned_cols=9  Identities=33%  Similarity=0.704  Sum_probs=3.5

Q ss_pred             HHHHHHHHH
Q 026630           14 IGVVIGVLL   22 (235)
Q Consensus        14 ~g~~~~~~~   22 (235)
                      ++++.++++
T Consensus        14 ~svl~GLLL   22 (54)
T 2l8s_A           14 LSAFAGLLL   22 (54)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            333444433

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=89.51  E-value=1.5  Score=36.24  Aligned_cols=97  Identities=19%  Similarity=0.310  Sum_probs=61.4

Q ss_pred             hccCCCCceeEEEEEeCC--------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMST--------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e  188 (235)
                      +.|+.|....+|+....+        +..+++|......  ....+..|..++..+...++ +++++.+.  +  .+++|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence            357778888999997642        4678888874311  11455678888877743333 55665543  2  38999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      |+++.+|..-       .+.   ...++.++++.|+-||...
T Consensus       153 ~l~G~~l~~~-------~l~---~~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          153 YIPSRPLSCH-------EIS---LAHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             CCCEEECCTT-------GGG---SHHHHHHHHHHHHHHTTCC
T ss_pred             EeCCcccChh-------hcC---CHHHHHHHHHHHHHHhCCc
Confidence            9986444211       011   1245778899999999865

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=88.75  E-value=1.6  Score=35.76  Aligned_cols=102  Identities=9%  Similarity=0.068  Sum_probs=57.8

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecC-----Ch----hcHHHHHHHHHHHc-cCCCCCccceeeEEEeCCEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATD-----SK----QGEKEFQTEVMLLG-RLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~-----~~----~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      +.+|.|..+.+|+... ++..+++|.....     ..    .....+..|+..+. ......+++++...  .+..++||
T Consensus        40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~  116 (420)
T 2pyw_A           40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM  116 (420)
T ss_dssp             EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred             EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence            4588999999999965 5678999943221     10    02223444443322 22234566666554  45668999


Q ss_pred             Ecc-cCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 026630          188 VFM-SKG-SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG  229 (235)
Q Consensus       188 e~~-~~g-~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  229 (235)
                      ||+ ++. .+...+.....  .+     ..+.+++..|+-||..
T Consensus       117 e~l~~g~~~l~~~l~~~~~--~~-----~~~~~lg~~La~lH~~  153 (420)
T 2pyw_A          117 RYLEPPHIILRKGLIAGIE--YP-----FLADHMSDYMAKTLFF  153 (420)
T ss_dssp             CCCCTTCEEHHHHHHHTCC--CT-----THHHHHHHHHHHHHHT
T ss_pred             eecCCcchhHHHHHhcCCC--CH-----HHHHHHHHHHHHHHHh
Confidence            999 773 34333322211  11     2456677777777754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=88.14  E-value=2.7  Score=32.90  Aligned_cols=94  Identities=15%  Similarity=0.125  Sum_probs=55.4

Q ss_pred             cCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC--CCccceeeE-----EEeCCEEEEEEEcccC
Q 026630          120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH--RNLVNLVGY-----CAEKGQHMLVYVFMSK  192 (235)
Q Consensus       120 lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~-----~~~~~~~~lv~e~~~~  192 (235)
                      ++ |....+|+....+|..+++|..+... .....+..|..++..+..  -.+++++..     ....+..++++||+++
T Consensus        34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G  111 (328)
T 1zyl_A           34 LN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  111 (328)
T ss_dssp             EC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             ec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence            55 66778998876567678999986431 123355567666665521  123333332     2234566889999987


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD  228 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  228 (235)
                      ..+..         .+.    ..+.+++..|+-||.
T Consensus       112 ~~~~~---------~~~----~~~~~~g~~La~lH~  134 (328)
T 1zyl_A          112 RQFEA---------DNI----DQMEAVGRYLGRMHQ  134 (328)
T ss_dssp             EECCS---------SCH----HHHHHHHHHHHHHHH
T ss_pred             CCCCC---------CCH----HHHHHHHHHHHHHHH
Confidence            54320         122    235667777777774

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=86.67  E-value=0.48  Score=29.18  Aligned_cols=16  Identities=25%  Similarity=0.304  Sum_probs=7.8

Q ss_pred             eeehhHHHHHHHHHHH
Q 026630            9 IIGISIGVVIGVLLAI   24 (235)
Q Consensus         9 i~~i~~g~~~~~~~~~   24 (235)
                      +++|++|++.+++++.
T Consensus        10 ~~~Iv~gvi~gilliG   25 (79)
T 2knc_B           10 ILVVLLSVMGAILLIG   25 (79)
T ss_dssp             SHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHH
Confidence            3455555555544333

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=86.14  E-value=4.5  Score=33.75  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=58.7

Q ss_pred             ccCCCCceeEEEEEeCC-CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEEcccCCChh
Q 026630          119 LIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       119 ~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      .|+.|-...+|+....+ +..+++|......... -+...|..++..+...++ +++++.+  .+  ..|+||+++.+|.
T Consensus       115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l~  189 (458)
T 2qg7_A          115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYALS  189 (458)
T ss_dssp             EECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEECC
T ss_pred             EcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccCC
Confidence            46777778899988744 3678888764332111 112477777777754444 4566655  22  3599999875542


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      .       ..+..   ..++.++++.|+-||+...
T Consensus       190 ~-------~~l~~---~~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          190 R-------EDIKN---PKFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             T-------TTTTS---HHHHHHHHHHHHHHHTCCC
T ss_pred             h-------hhcCC---HHHHHHHHHHHHHHhcCCc
Confidence            1       11111   2467788999999998654

>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A

Probab=84.74  E-value=1.4  Score=22.71  Aligned_cols=23  Identities=35%  Similarity=0.245  Sum_probs=14.1

Q ss_pred             CCccceeehhHHHHHHHHHHHHH
Q 026630            4 ESSGLIIGISIGVVIGVLLAISA   26 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~   26 (235)
                      -+...++.|+.++.++++-.+++
T Consensus         7 fs~p~i~lII~~vmaGiIG~Ill   29 (40)
T 1afo_A            7 FSEPEITLIIFGVMAGVIGTILL   29 (40)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHH
Confidence            34556777777777776544433

>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A

Probab=84.67  E-value=0.2  Score=26.55  Aligned_cols=26  Identities=27%  Similarity=0.461  Sum_probs=14.2

Q ss_pred             CCccceeehhHHHHHHHHHHHHHHHH
Q 026630            4 ESSGLIIGISIGVVIGVLLAISALFC   29 (235)
Q Consensus         4 ~~~~~i~~i~~g~~~~~~~~~~~~~~   29 (235)
                      ++.+.++++.++.+.+..++++.+++
T Consensus        14 ~srga~iGL~v~gVai~~vIVvsl~m   39 (43)
T 2llm_A           14 SNKGAIIGLMVGGVVIATVIVITLVM   39 (43)
Confidence            45566777776655554444444443

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=84.22  E-value=5.1  Score=31.18  Aligned_cols=95  Identities=11%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC--ccceeeE------EEeCCEEEEEEEc
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN--LVNLVGY------CAEKGQHMLVYVF  189 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~  189 (235)
                      +.|+.|....+|+....++ .+++|.......  ...+..|..++..+...+  +++++..      ....+..+++++|
T Consensus        28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eccCCCcccceEEEEeCCc-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            3466787788999877555 677888765211  123445665555442111  2333321      1234567899999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD  228 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  228 (235)
                      +++..+..         .+    ...+.+++..|+-||.
T Consensus       105 l~G~~~~~---------~~----~~~~~~~g~~La~lH~  130 (322)
T 2ppq_A          105 LEGMWLRK---------PE----AKHCREVGKALAAMHL  130 (322)
T ss_dssp             CCCBCCSS---------CC----HHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCC---------CC----HHHHHHHHHHHHHHHH
Confidence            98865421         12    2345677778888885

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=83.95  E-value=6  Score=31.02  Aligned_cols=101  Identities=13%  Similarity=0.081  Sum_probs=53.2

Q ss_pred             ccCCCCcee-EEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC--CCCccceeeEEEeCCEEEEEEEcccCCCh
Q 026630          119 LIGQGAFGP-VYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEKGQHMLVYVFMSKGSL  195 (235)
Q Consensus       119 ~lg~G~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~L  195 (235)
                      .|+.|.... +|+....++..+++|..+.....   .+..|..++..+.  .-.+++++......+  +++||++.+..+
T Consensus        25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~---~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l   99 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGG---DTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF   99 (333)
T ss_dssp             C--------CCEEEECTTCCEEEEEECCTTTTC---CSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred             ECCCCCCCceEEEEEcCCCCeEEEEECCCCCCc---cccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence            354454433 56665533667777765433211   2234555554442  223556665543333  689999987777


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      .+.+....   .+.   ...+.+++..|+-||...
T Consensus       100 ~~~l~~~~---~~~---~~~~~~~~~~La~lH~~~  128 (333)
T 3csv_A          100 TEVINNDP---AQE---MPLYRAAVDLLIHLHDAQ  128 (333)
T ss_dssp             HHHHHHCG---GGH---HHHHHHHHHHHHHHHTSC
T ss_pred             HHHhcCCC---ccH---HHHHHHHHHHHHHHhcCC
Confidence            77663321   111   356778888899999754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=83.77  E-value=11  Score=29.72  Aligned_cols=92  Identities=13%  Similarity=0.137  Sum_probs=54.6

Q ss_pred             CCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC---CCCCccceeeE------EEeCCEEEEEEEccc
Q 026630          121 GQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL---HHRNLVNLVGY------CAEKGQHMLVYVFMS  191 (235)
Q Consensus       121 g~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~------~~~~~~~~lv~e~~~  191 (235)
                      |.|....+|+....++ .+++|..+....      ..|...+..+   .-|.+++++..      ....+..+++|+|++
T Consensus        32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            3444678999987566 889998765432      2333333333   11224444432      233567889999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +..+..       ..++..    .+.+++..|+-||...
T Consensus       105 G~~~~~-------~~~~~~----~~~~lg~~La~LH~~~  132 (339)
T 3i1a_A          105 APNGFT-------QNLTGK----QWKQLGKVLRQIHETS  132 (339)
T ss_dssp             CCBTTT-------SCCCHH----HHHHHHHHHHHHHTCC
T ss_pred             CCcCcc-------cCCCHH----HHHHHHHHHHHHhCcC
Confidence            866521       123433    3467888888899765

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=83.60  E-value=2.9  Score=23.48  Aligned_cols=25  Identities=8%  Similarity=0.084  Sum_probs=13.9

Q ss_pred             ccceeehhHHHHHHHHHHHHHHHHh
Q 026630            6 SGLIIGISIGVVIGVLLAISALFCF   30 (235)
Q Consensus         6 ~~~i~~i~~g~~~~~~~~~~~~~~~   30 (235)
                      -++|+..+++.++++.+++++++-+
T Consensus        12 ~wiIi~svl~GLllL~li~~~LwK~   36 (54)
T 2knc_A           12 IWWVLVGVLGGLLLLTILVLAMWKV   36 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3555666666666665555554443

>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}

Probab=83.52  E-value=1.7  Score=21.68  Aligned_cols=23  Identities=17%  Similarity=0.364  Sum_probs=10.9

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhh
Q 026630           12 ISIGVVIGVLLAISALFCFRYHR   34 (235)
Q Consensus        12 i~~g~~~~~~~~~~~~~~~~~~r   34 (235)
                      +++|++++.+++...+++|+-||
T Consensus        12 ~i~gl~vif~~lg~tflywrgrr   34 (40)
T 2l9u_A           12 VIAGLVVIFMMLGGTFLYWRGRR   34 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCceeEEEcccc
Confidence            34444444444444555555443

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*

Probab=83.20  E-value=0.23  Score=45.19  Aligned_cols=18  Identities=22%  Similarity=0.178  Sum_probs=0.0

Q ss_pred             CccceeehhHHHHHHHHH
Q 026630            5 SSGLIIGISIGVVIGVLL   22 (235)
Q Consensus         5 ~~~~i~~i~~g~~~~~~~   22 (235)
                      +.+.+++|++++++++++
T Consensus       703 ~~~aii~il~~~~~ll~~  720 (880)
T 1q55_A          703 DLPIILVILGSVLALLIL  720 (880)
T ss_dssp             ------------------
T ss_pred             cHHHHHHHHHHHHHHHHH
Confidence            345566665555444433

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=81.77  E-value=3.2  Score=32.14  Aligned_cols=96  Identities=8%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             hccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEEcc-cCCCh
Q 026630          118 TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYVFM-SKGSL  195 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~L  195 (235)
                      +.|+.|....+|+.     ..+++|......... .+...|...+..+...++ +++++.  +.+.-++++||+ ++.++
T Consensus        24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             EEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred             eEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence            55788888899988     457788775432111 122456666665532233 344443  333346899999 55443


Q ss_pred             hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          196 ASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      ....         ......++.+++..|+-||+.+
T Consensus        96 ~~~~---------~~~~~~~~~~~~~~La~lH~~~  121 (301)
T 3dxq_A           96 SPEK---------FKTRPGSPARAGEAFRKLHGSG  121 (301)
T ss_dssp             CHHH---------HHHSTTHHHHHHHHHHHHHTSC
T ss_pred             CHhh---------HhhhHHHHHHHHHHHHHHhCCC
Confidence            2110         0000236778888999999865

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=80.75  E-value=6.9  Score=32.28  Aligned_cols=99  Identities=16%  Similarity=0.190  Sum_probs=59.0

Q ss_pred             hccCCCCceeEEEEEeCC--------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCC-ccceeeEEEeCCEEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMST--------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN-LVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e  188 (235)
                      +.+..|-...+|+.....        +..+++|........ .-+..+|..+++.+...+ .+++++.+  .+  ++|+|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEEE
Confidence            346667778889987642        577888886443211 112346777776663222 34555432  22  68999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      |+++..|..--       +.   ...++.++++.|+-||+..+
T Consensus       151 fI~G~~l~~~~-------l~---~~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          151 FIDGEPLTTKQ-------LQ---LTHICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             CCCSEECCTGG-------GG---SHHHHHHHHHHHHHHHTHHH
T ss_pred             EeCCccCChhh-------cC---CHHHHHHHHHHHHHHhcCch
Confidence            99985542110       11   12367788899999997543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	235
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-33
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-32
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-32
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-31
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-31
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-31
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-31
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-31
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-30
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-30
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-30
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-29
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-29
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-28
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-28
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-28
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-28
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-27
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-27
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-27
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-27
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-26
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-26
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-26
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-25
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-25
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-25
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-25
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-24
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-24
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-24
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-24
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-24
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-24
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-23
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-23
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-23
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-23
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-23
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-22
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-22
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-22
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-22
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-22
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-21
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-21
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-21
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-20
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-20
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-19
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-19
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-18
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-18
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-17
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-13

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 3e-33
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVM 160
           +P  + K +++        +G G FG V+    +    VAVK L   S      F  E  
Sbjct: 10  VPRETLKLVER--------LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEAN 60

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           L+ +L H+ LV L      +    ++  +M  GSL   L   +   LT N  + +A  +A
Sbjct: 61  LMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119

Query: 221 RGLEYLHDGVSCH 233
            G+ ++ +    H
Sbjct: 120 EGMAFIEERNYIH 132

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-32
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 9/132 (6%)

Query: 103 EYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLL 162
             + K+L+         IG+G FG V       G  VAVK +   +    + F  E  ++
Sbjct: 3   ALNMKELK-----LLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVM 54

Query: 163 GRLHHRNLVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
            +L H NLV L+G   E KG   +V  +M+KGSL  +L       L  +  +  +LDV  
Sbjct: 55  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 114

Query: 222 GLEYLHDGVSCH 233
            +EYL      H
Sbjct: 115 AMEYLEGNNFVH 126

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 8e-32
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 2/113 (1%)

Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
            F   +G G FG V   +      VA+K++  +    E EF  E  ++  L H  LV L 
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
           G C ++    ++  +M+ G L ++L +           + +  DV   +EYL 
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLE 117

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  115 bits (288), Expect = 2e-31
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 14/136 (10%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQT 157
           PE  + DL++        IG G+FG VY A+ +   E VA+K ++   KQ     ++   
Sbjct: 13  PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
           EV  L +L H N +   G    +    LV  +    +    L + +  PL       +  
Sbjct: 65  EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS--DLLEVHKKPLQEVEIAAVTH 122

Query: 218 DVARGLEYLHDGVSCH 233
              +GL YLH     H
Sbjct: 123 GALQGLAYLHSHNMIH 138

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  115 bits (290), Expect = 2e-31
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G GAFG V++    +TG   A K + T  +  ++  + E+  +  L H  LVNL    
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +  + +++Y FMS G L   + DE+   ++ +  V     V +GL ++H+    H
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVH 147

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (286), Expect = 2e-31
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 104 YSYKDLQKATCNFTT-----------LIGQGAFGPVYKAQM----STGETVAVKVLATD- 147
           ++++D  +A   F             +IG G FG V    +         VA+K L +  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 148 SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
           +++  ++F +E  ++G+  H N+++L G   +    M++  FM  GSL      +N G  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125

Query: 208 TWNLRVHIALDVARGLEYLHDGVSCH 233
           T    V +   +A G++YL D    H
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNYVH 151

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (285), Expect = 3e-31
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 10/133 (7%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
           PE  ++ + +        +G GAFG VYKAQ   T    A KV+ T S++  +++  E+ 
Sbjct: 10  PEDFWEIIGE--------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 61

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           +L    H N+V L+     +    ++  F + G++ + + +    PLT +    +     
Sbjct: 62  ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTL 120

Query: 221 RGLEYLHDGVSCH 233
             L YLHD    H
Sbjct: 121 DALNYLHDNKIIH 133

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 3e-31
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 109 LQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGR 164
           ++    +F  +  +G G  G V+K     +G  +A K++  + K     +   E+ +L  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 165 LHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
            +   +V   G     G+  +    M  GSL   L     G +   +   +++ V +GL 
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLT 118

Query: 225 YLHD 228
           YL +
Sbjct: 119 YLRE 122

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  114 bits (285), Expect = 1e-30
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G GAFG V++    +TG     K + T     +   + E+ ++ +LHH  L+NL    
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +K + +L+  F+S G L   +  E+Y  ++    ++       GL+++H+    H
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVH 150

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 3e-30
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 2/119 (1%)

Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
            F   IG G FG V+       + VA+K +  +    E++F  E  ++ +L H  LV L 
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           G C E+    LV+ FM  G L+ +      G       + + LDV  G+ YL +    H
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  110 bits (276), Expect = 7e-30
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 7/132 (5%)

Query: 103 EYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVML 161
           E    D+          +G G +G VY+        TVAVK L  D+ + E EF  E  +
Sbjct: 13  EMERTDIT-----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66

Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
           +  + H NLV L+G C  +    ++  FM+ G+L  +L + N   ++  + +++A  ++ 
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 126

Query: 222 GLEYLHDGVSCH 233
            +EYL      H
Sbjct: 127 AMEYLEKKNFIH 138

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-29
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
            IG G+FG VYK +      VAVK+L     + Q  + F+ EV +L +  H N++  +GY
Sbjct: 15  RIGSGSFGTVYKGK--WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                Q  +V  +    SL  HL+            + IA   A+G++YLH     H
Sbjct: 73  S-TAPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIH 127

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 4e-29
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 119 LIGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKE-FQTEVMLLGRL-HHRNL 170
            +G GAFG V +A            TVAVK+L   +   E+E   +E+ +L  L +H N+
Sbjct: 30  TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89

Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHLY----------------DENYGPLTWNLRVH 214
           VNL+G C   G  +++  +   G L + L                 +++   L     + 
Sbjct: 90  VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149

Query: 215 IALDVARGLEYLHDGVSCH 233
            +  VA+G+ +L      H
Sbjct: 150 FSYQVAKGMAFLASKNCIH 168

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  107 bits (269), Expect = 1e-28
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
           +F  ++G GAF  V  A+   T + VA+K +A  + +G E   + E+ +L ++ H N+V 
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 71

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L       G   L+   +S G L   + ++  G  T      +   V   ++YLHD    
Sbjct: 72  LDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIV 129

Query: 233 H 233
           H
Sbjct: 130 H 130

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 13/139 (9%)

Query: 91  KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSK 149
           K  ++VS  G P+  Y   +K        IGQGA G VY A  ++TG+ VA++ +    +
Sbjct: 8   KLRSIVSV-GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58

Query: 150 QGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTW 209
             ++    E++++    + N+VN +       +  +V  +++ GSL   + +     +  
Sbjct: 59  PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDE 115

Query: 210 NLRVHIALDVARGLEYLHD 228
                +  +  + LE+LH 
Sbjct: 116 GQIAAVCRECLQALEFLHS 134

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 5e-28
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 120 IGQGAFGPVYKAQM---STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVG 175
           +G G FG V +           VA+KVL   +++ + +E   E  ++ +L +  +V L+G
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 76

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            C +    MLV      G L   L  +    +  +    +   V+ G++YL 
Sbjct: 77  VC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLE 126

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 6e-28
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 120 IGQGAFGPVYKAQM---STGETVAVKVLATDSKQGE--KEFQTEVMLLGRLHHRNLVNLV 174
           +G G FG V K         +TVAVK+L  ++       E   E  ++ +L +  +V ++
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           G C E    MLV      G L  +L       +     + +   V+ G++YL +    H
Sbjct: 75  GIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVH 130

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 6e-28
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
            +G+G FG VY A+   +   +A+KVL     +    E + + EV +   L H N++ L 
Sbjct: 13  PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 72

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           GY  +  +  L+  +   G++   L  +               ++A  L Y H     H
Sbjct: 73  GYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIH 129

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 25/156 (16%)

Query: 91  KRSNVVSASGIP-----EYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL 144
           K + VV+  G       E SY D +        +IG G+FG VY+A+   +GE VA+K +
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKV 53

Query: 145 ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM------LVYVFMSKGSLASH 198
                Q ++    E+ ++ +L H N+V L  +    G+        LV  ++ +      
Sbjct: 54  ----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109

Query: 199 L-YDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             Y      L           + R L Y+H    CH
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 2e-27
 Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVM 160
           IP  S +   K        +GQG FG V+    +    VA+K L        + F  E  
Sbjct: 14  IPRESLRLEVK--------LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQ 64

Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
           ++ +L H  LV L      +    +V  +MSKGSL   L  E    L     V +A  +A
Sbjct: 65  VMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 123

Query: 221 RGLEYLHDGVSCH 233
            G+ Y+      H
Sbjct: 124 SGMAYVERMNYVH 136

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 4e-27
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
            +G+GA+G V  A    T E VAVK++    +    +  + E+ +   L+H N+V   G+
Sbjct: 12  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             E     L   + S G L   +  E    +           +  G+ YLH     H
Sbjct: 72  RREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 126

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 8e-27
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 40/178 (22%)

Query: 96  VSASGIPEYSYKDLQKATCN-----------FTTLIGQGAFGPVYKA------QMSTGET 138
           V+ S   EY Y D ++   +           F  ++G GAFG V  A      +      
Sbjct: 10  VTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ 69

Query: 139 VAVKVLATDSKQGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLA 196
           VAVK+L   +   E+E   +E+ ++ +L  H N+VNL+G C   G   L++ +   G L 
Sbjct: 70  VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 129

Query: 197 SHLY---------------------DENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           ++L                      +E+   LT+   +  A  VA+G+E+L      H
Sbjct: 130 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 187

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 4e-26
 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 24/151 (15%)

Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET---VAVKVLATD-SKQGEKEFQT 157
           P   + D++     F  +IG+G FG V KA++         A+K +    SK   ++F  
Sbjct: 5   PVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 59

Query: 158 EVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY------------ 204
           E+ +L +L HH N++NL+G C  +G   L   +   G+L   L                 
Sbjct: 60  ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 119

Query: 205 --GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
               L+    +H A DVARG++YL      H
Sbjct: 120 TASTLSSQQLLHFAADVARGMDYLSQKQFIH 150

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 4e-26
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
           IG+G FG V++ +   GE VAVK+ ++  ++     + E+     L H N++  +    +
Sbjct: 11  IGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNK 68

Query: 180 KGQH----MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
                    LV  +   GSL  +L   N   +T    + +AL  A GL +LH
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 117

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.8 bits (248), Expect = 6e-26
 Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 17/140 (12%)

Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATD---SKQGEK 153
           I E   + L+K        +G G+FG V + +         +VAVK L  D     +   
Sbjct: 5   IGEKDLRLLEK--------LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 56

Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
           +F  EV  +  L HRNL+ L G         +V      GSL   L     G        
Sbjct: 57  DFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLS 114

Query: 214 HIALDVARGLEYLHDGVSCH 233
             A+ VA G+ YL      H
Sbjct: 115 RYAVQVAEGMGYLESKRFIH 134

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 1e-25
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 6/119 (5%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           ++G+G+F  V  A+ ++T    A+K+L       +        E  ++ RL H   V L 
Sbjct: 15  ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
               +  +      +   G L  ++     G            ++   LEYLH     H
Sbjct: 75  FTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIH 131

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 1e-25
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 115 NFTTLIGQGAFGPVYKAQM----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
           +F  +IG+G FG VY   +          AVK L   +  GE  +F TE +++    H N
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89

Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           +++L+G C   +G  ++V  +M  G L + + +E     T    +   L VA+G+++L  
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS 148

Query: 229 GVSCH 233
               H
Sbjct: 149 KKFVH 153

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 2e-25
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 3/116 (2%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G+G FG V++    S+ +T   K +       +   + E+ +L    HRN+++L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
               + ++++ F+S   +   + + +   L     V     V   L++LH     H
Sbjct: 71  ESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 4e-25
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
           ++G G  G V +     T E  A+K+L     Q   + + EV L  R     ++V +V  
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVDV 73

Query: 177 C----AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
                A +   ++V   +  G L S + D      T      I   +   ++YLH     
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 133

Query: 233 H 233
           H
Sbjct: 134 H 134

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.2 bits (241), Expect = 1e-24
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 31/160 (19%)

Query: 105 SYKDLQKATCNFTTL--IGQGAFGPVYKAQ------MSTGETVAVKVLATD-SKQGEKEF 155
               L+    N   +  IG+GAFG V++A+            VAVK+L  + S   + +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 156 QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY----------- 204
           Q E  L+    + N+V L+G CA      L++ +M+ G L   L   +            
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 205 -----------GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                       PL+   ++ IA  VA G+ YL +    H
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH 163

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 1e-24
 Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 13/151 (8%)

Query: 88  EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL-- 144
            GF R  V   +      Y+DLQ         +G GA+G V  A    TG  VA+K L  
Sbjct: 2   SGFYRQEVTKTAWEVRAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLYR 53

Query: 145 ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE-- 202
              S+   K    E+ LL  + H N++ L+              F            +  
Sbjct: 54  PFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM 113

Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            +  L  +    +   + +GL Y+H     H
Sbjct: 114 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 144

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 1e-24
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGY 176
            IG+GA+G V  A        VA+K ++    Q   +    E+ +L R  H N++ +   
Sbjct: 15  YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 74

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDE-NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                   +  V++    + + LY       L+ +   +    + RGL+Y+H     H
Sbjct: 75  IRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 132

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 96.0 bits (238), Expect = 2e-24
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLV 174
           ++G G    V+ A+ +     VAVKVL  D  +       F+ E      L+H  +V + 
Sbjct: 14  ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73

Query: 175 GYCAEK----GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                +        +V  ++   +L   ++    GP+T    + +  D  + L + H 
Sbjct: 74  DTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQ 129

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.0 bits (238), Expect = 2e-24
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 7/120 (5%)

Query: 119 LIGQGAFGPVYKAQM----STGETVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
            IG+G FG V++       +    VA+K     +    +E F  E + + +  H ++V L
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
           +G    +    ++    + G L S         L     +  A  ++  L YL      H
Sbjct: 74  IGVI-TENPVWIIMELCTLGELRSF-LQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 2e-24
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 7/122 (5%)

Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
            IG G++G   K +  S G+ +  K L   + ++  ++   +EV LL  L H N+V    
Sbjct: 11  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 70

Query: 176 YCAEKGQHM--LVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
              ++      +V  +   G LAS +    +    L     + +   +   L+  H    
Sbjct: 71  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 130

Query: 232 CH 233
             
Sbjct: 131 GG 132

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 97.1 bits (241), Expect = 2e-24
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVM---LLGRLHHRNLV 171
           +IG+G FG VY  +   TG+  A+K L       KQGE     E +   L+       +V
Sbjct: 11  IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 70

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
            +        +   +   M+ G L  HL    +G  +       A ++  GLE++H+   
Sbjct: 71  CMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFV 128

Query: 232 CH 233
            +
Sbjct: 129 VY 130

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 94.2 bits (233), Expect = 1e-23
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 120 IGQGAFGPVYKAQMSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
           IG+G +G VYKAQ + GET A+K +    + +        E+ +L  L H N+V L    
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             K + +LV+  + +      L D   G L         L +  G+ Y HD    H
Sbjct: 70  HTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 1e-23
 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE-----FQTEVMLLGRLHHRNLVN 172
            +G+G F  VYKA+  +T + VA+K +    +   K+        E+ LL  L H N++ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L+     K    LV+ FM        +  +N   LT +      L   +GLEYLH     
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122

Query: 233 H 233
           H
Sbjct: 123 H 123

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 1e-23
 Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 15/129 (11%)

Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
           +GQG+FG VY+       +      VA+K +    S +   EF  E  ++   +  ++V 
Sbjct: 28  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 87

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGLE 224
           L+G  ++    +++   M++G L S+L         +    P + +  + +A ++A G+ 
Sbjct: 88  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 147

Query: 225 YLHDGVSCH 233
           YL+     H
Sbjct: 148 YLNANKFVH 156

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 93.4 bits (231), Expect = 3e-23
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            IG G+FG +Y    ++ GE VA+K+    +K    +   E  +   +     +  + +C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
             +G + ++ + +   SL   L++      +    + +A  +   +EY+H     H
Sbjct: 72  GAEGDYNVMVMELLGPSL-EDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 4e-23
 Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT----EVMLLGRLHHRNLVNL 173
           ++G+G+FG V+ A+   T +  A+K L  D    + + +     + +L     H  L ++
Sbjct: 9   MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 68

Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                 K     V  +++ G L  H+  ++      +     A ++  GL++LH 
Sbjct: 69  FCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS 121

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 6e-23
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
           F   IG+G+F  VYK     T   VA   L     +K   + F+ E  +L  L H N+V 
Sbjct: 13  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 173 LVGYCAE----KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
                      K   +LV   M+ G+L ++L  + +  +   +       + +GL++LH 
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHT 130

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 1e-22
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
           ++G GAFG VYK   +  GE V + V         S +  KE   E  ++  + + ++  
Sbjct: 16  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L+G C       L+   M  G L  +   E+   +     ++  + +A+G+ YL D    
Sbjct: 76  LLGIC-LTSTVQLITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 133

Query: 233 H 233
           H
Sbjct: 134 H 134

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 1e-22
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 24/139 (17%)

Query: 119 LIGQGAFGPVYKAQM--------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHR 168
            +G+GAFG V  A+         +    VAVK+L +D +++   +  +E+ ++  +  H+
Sbjct: 20  PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--------------ENYGPLTWNLRVH 214
           N++NL+G C + G   ++  + SKG+L  +L                     L+    V 
Sbjct: 80  NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 139

Query: 215 IALDVARGLEYLHDGVSCH 233
            A  VARG+EYL      H
Sbjct: 140 CAYQVARGMEYLASKKCIH 158

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 90.9 bits (225), Expect = 1e-22
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 13/126 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL---------ATDSKQGEKEFQTEVMLLGRLH-H 167
           ++G+G    V +     T +  AVK++         A + ++  +    EV +L ++  H
Sbjct: 10  ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 69

Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
            N++ L           LV+  M KG L  +L       L+      I   +   +  LH
Sbjct: 70  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALH 127

Query: 228 DGVSCH 233
                H
Sbjct: 128 KLNIVH 133

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 2e-22
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 115 NFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRN 169
           NF  +  IG+G +G VYKA+   TGE VA+K +   T+++        E+ LL  L+H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           +V L+     + +  LV+ F+ +      +       +   L       + +GL + H  
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLK-KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 230 VSCH 233
              H
Sbjct: 122 RVLH 125

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 3e-22
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 23/133 (17%)

Query: 119 LIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGR-LHHRNL 170
            +G+GAFG V +A      + +T  TVAVK+L   +   E +   +E+ +L    HH N+
Sbjct: 20  PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 79

Query: 171 VNLVGYCAEKGQH-MLVYVFMSKGSLASHLYDENY--------------GPLTWNLRVHI 215
           VNL+G C + G   M++  F   G+L+++L  +                  LT    +  
Sbjct: 80  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 139

Query: 216 ALDVARGLEYLHD 228
           +  VA+G+E+L  
Sbjct: 140 SFQVAKGMEFLAS 152

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 5e-22
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 119 LIGQGAFGPVYKAQMSTGE-----TVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
           +IG G FG VYK  + T        VA+K L     + ++ +F  E  ++G+  H N++ 
Sbjct: 14  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 73

Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
           L G  ++    M++  +M  G+       E  G  +    V +   +A G++YL +    
Sbjct: 74  LEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 132

Query: 233 H 233
           H
Sbjct: 133 H 133

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 1e-21
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 15/145 (10%)

Query: 102 PEYSYKDLQKATCNFT------TLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGE 152
           P +  ++L K            + +G GA+G V  A    TG  VAVK L     S    
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61

Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQ----HMLVYVFMSKGSLASHLYDENYGPLT 208
           K    E+ LL  + H N++ L+            + +  V    G+  +++       LT
Sbjct: 62  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLT 119

Query: 209 WNLRVHIALDVARGLEYLHDGVSCH 233
            +    +   + RGL+Y+H     H
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIH 144

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 4e-21
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 9/117 (7%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGE------KEFQTEVMLLGRLHHRNLV 171
            +G G F  V K +  STG   A K +     +        ++ + EV +L  + H N++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76

Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            L      K   +L+   ++ G L   L       LT          +  G+ YLH 
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHS 131

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 4e-21
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE------FQTEVMLLGRLH--HRN 169
           L+G G FG VY    +S    VA+K +  D      E         EV+LL ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           ++ L+ +       +L+               E  G L   L       V   + + H+ 
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNC 129

Query: 230 VSCH 233
              H
Sbjct: 130 GVLH 133

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.2 bits (215), Expect = 9e-21
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 6/118 (5%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKE---FQTEVMLLGRLHHRNLVNLVG 175
           +G G+FG V   +   +G   A+K+L        K+      E  +L  ++   LV L  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108

Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
              +     +V  +++ G + SHL     G  +       A  +    EYLH     +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 85.6 bits (211), Expect = 2e-20
 Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 4/116 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            IG+G+FG +++   +   + VA+K      +    + + E      L     +  V Y 
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
            ++G H ++ + +  G     L D      +       A  +   ++ +H+    +
Sbjct: 70  GQEGLHNVLVIDL-LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.1 bits (210), Expect = 3e-20
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 11/134 (8%)

Query: 104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEV 159
           YS +D Q         +G G+FG V+  +    G   A+KVL  +     +  +    E 
Sbjct: 1   YSLQDFQ-----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER 55

Query: 160 MLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDV 219
           ++L  + H  ++ + G   +  Q  ++  ++  G L S L      P    +    A +V
Sbjct: 56  LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--NPVAKFYAAEV 113

Query: 220 ARGLEYLHDGVSCH 233
              LEYLH     +
Sbjct: 114 CLALEYLHSKDIIY 127

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (203), Expect = 2e-19
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 5/117 (4%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IG+G +G V+KA+   T E VA+K +    D +        E+ LL  L H+N+V L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69

Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                +  LV+ F  +       +D   G L   +       + +GL + H     H
Sbjct: 70  LHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 3e-19
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLV 174
           L+G+G FG V   +  +TG   A+K+L  +   +K       TE  +L    H  L  L 
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71

Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
                  +   V  + + G L  HL        T         ++   LEYLH     +
Sbjct: 72  YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVY 128

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 81.8 bits (201), Expect = 7e-19
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGY 176
            +G+G +  V++A  ++  E V VK+L       +K+ + E+ +L  L    N++ L   
Sbjct: 42  KLGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKKIKREIKILENLRGGPNIITLADI 98

Query: 177 CAEKGQHMLVYVF--MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
             +        VF  ++            Y  LT         ++ + L+Y H 
Sbjct: 99  VKDPVSRTPALVFEHVNNTDFKQL-----YQTLTDYDIRFYMYEILKALDYCHS 147

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%)

Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRL---HHRNLVN 172
           IG+GA+G V+KA+   + G  VA+K +   T  +        EV +L  L    H N+V 
Sbjct: 15  IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 74

Query: 173 LVGYCAEKGQHMLVYVFM----SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           L   C          + +        L ++L       +       +   + RGL++LH 
Sbjct: 75  LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 134

Query: 229 GVSCH 233
               H
Sbjct: 135 HRVVH 139

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (196), Expect = 4e-18
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
            IG GA G V  A        VA+K L     ++   K    E++L+  ++H+N+++L+ 
Sbjct: 24  PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83

Query: 176 YCAEKGQHMLV-YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
               +        V++    + ++L       L      ++   +  G+++LH     H
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 142

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 13/125 (10%)

Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
           IGQG FG V+KA+   TG+ VA+K +    + +        E+ +L  L H N+VNL+  
Sbjct: 18  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 77

Query: 177 CAE--------KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
           C          KG   LV+ F         L        T +    +   +  GL Y+H 
Sbjct: 78  CRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 135

Query: 229 GVSCH 233
               H
Sbjct: 136 NKILH 140

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 4e-17
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 119 LIGQGAFGPVYKAQ----MSTGETVAVKVL----ATDSKQGEKEFQTEVMLLGRL-HHRN 169
           ++G GA+G V+  +      TG+  A+KVL         +  +  +TE  +L  +     
Sbjct: 31  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 90

Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
           LV L      + +  L+  +++ G L +HL        T +       ++   LE+LH  
Sbjct: 91  LVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL 148

Query: 230 VSCH 233
              +
Sbjct: 149 GIIY 152

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 15/125 (12%)

Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDS----------KQGEKEFQTEVMLLGRLHHR 168
           L+G+G    V+           VK                  G+  F    +   R   R
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66

Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
            L  L G          VY +     L   +  +    +       +   +   +   + 
Sbjct: 67  ALQKLQGLA-----VPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH 121

Query: 229 GVSCH 233
               H
Sbjct: 122 RGIVH 126

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.1 bits (157), Expect = 5e-13
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 16/130 (12%)

Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
            +G G F  V+ A+ M     VA+K++  D K   +  + E+ LL R++  +        
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 178 A--------------EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
           A                G H+++   +   +L + +    +  +       I+  +  GL
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 224 EYLHDGVSCH 233
           +Y+H      
Sbjct: 139 DYMHRRCGII 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	235
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.94
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.93
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.92
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.91
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.9
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.9
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.9
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.9
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.9
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.9
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.9
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.89
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.88
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.88
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.88
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.87
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.87
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.86
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.86
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.85
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.84
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.83
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.82
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.62
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.62
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.34
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.55
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	89.27
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	81.85
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	80.32

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3e-28  Score=192.38  Aligned_cols=129  Identities=26%  Similarity=0.409  Sum_probs=114.2

Q ss_pred             HHHHHHHHhhhhhccCCCCceeEEEEEeC-CCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          106 YKDLQKATCNFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       106 ~~~l~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      -+++...++.+.+.||+|+||.||+|.+. +++.||||.++.+. ...+.|.+|+.+++.++||||+++++++.+.+..+
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            34556667778899999999999999764 57889999986543 34568999999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+++|+|.+++.......+++..+..++.||+.||+|||+++|+||+
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrD  140 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD  140 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCc
Confidence            999999999999999766667799999999999999999999999999996

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.9e-27  Score=182.72  Aligned_cols=120  Identities=30%  Similarity=0.481  Sum_probs=107.5

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.+.+.||+|+||.||+|.+.++..||||.++.. ....++|.+|+.++++++||||++++|++...+..++||||+++|
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            4567889999999999999878889999999754 334568999999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++... ...+++..+..++.||+.||+|||+++|+||+
T Consensus        86 ~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrD  126 (263)
T d1sm2a_          86 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  126 (263)
T ss_dssp             BHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred             cHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccceeecc
Confidence            999998653 35689999999999999999999999999996

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.3e-27  Score=184.01  Aligned_cols=121  Identities=23%  Similarity=0.263  Sum_probs=105.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|++.+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~   85 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   85 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEecc
Confidence            356778999999999999975 468899999997552 233456899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++..  ...+++.++..++.||+.||+|||++||+||+
T Consensus        86 ~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrD  128 (271)
T d1nvra_          86 SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  128 (271)
T ss_dssp             TTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCc
Confidence            99999999943  35699999999999999999999999999997

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=183.60  Aligned_cols=120  Identities=22%  Similarity=0.310  Sum_probs=108.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            466778899999999999975 5689999999986655556789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++..   ..+++.++..++.||+.||+|||++|||||+
T Consensus       101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrD  141 (293)
T d1yhwa1         101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (293)
T ss_dssp             TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence            9999998854   3589999999999999999999999999996

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1e-26  Score=184.55  Aligned_cols=121  Identities=29%  Similarity=0.482  Sum_probs=104.9

Q ss_pred             hhhhhccCCCCceeEEEEEeCC-C---CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQMST-G---ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +.+.+.||+|+||.||+|.... +   ..||||.+... .....+.|.+|+.+|++++||||++++|++...+..++|||
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            4455789999999999997632 2   25889988655 45556789999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++... ...+++.++..++.||+.||+|||+++||||+
T Consensus       108 y~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrD  153 (299)
T d1jpaa_         108 FMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD  153 (299)
T ss_dssp             CCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCc
Confidence            99999999988643 35689999999999999999999999999996

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-27  Score=184.98  Aligned_cols=121  Identities=27%  Similarity=0.375  Sum_probs=109.2

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      |++.+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            56678899999999999975 46889999999877666667899999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++.+. ...+++.++..++.||+.||+|||++||+||+
T Consensus        94 g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrD  135 (288)
T d2jfla1          94 GAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRD  135 (288)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEee
Confidence            9999987543 35699999999999999999999999999996

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-27  Score=187.10  Aligned_cols=126  Identities=25%  Similarity=0.380  Sum_probs=109.1

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEE
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      |++...+.+.+.||+|+||.||+|.++++..||||.+.... ...+.|.+|+.++.+++||||++++|++.+ +..++||
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~   86 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence            45556777889999999999999998778899999996543 345679999999999999999999998755 4578999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++.......+++.+++.++.||+.||.|||+++|+||+
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrD  134 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD  134 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence            999999999988554444689999999999999999999999999996

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.5e-27  Score=185.11  Aligned_cols=123  Identities=29%  Similarity=0.400  Sum_probs=105.3

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +....+.+.+.||+|+||.||+|.+.  ..||||.++..  +....+.|.+|+.++.+++||||+++++++.. +..++|
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv   81 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV   81 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence            33445667789999999999999863  46999998654  44556789999999999999999999998754 467899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++... ...+++..++.++.||+.||+|||+++||||+
T Consensus        82 ~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrD  129 (276)
T d1uwha_          82 TQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD  129 (276)
T ss_dssp             EECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccc
Confidence            9999999999999643 35699999999999999999999999999996

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=178.73  Aligned_cols=120  Identities=26%  Similarity=0.394  Sum_probs=107.2

Q ss_pred             hhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccCC
Q 026630          114 CNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKG  193 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g  193 (235)
                      +.+.+.||+|+||.||+|.++++..||||.++... ...++|.+|+.++..++||||++++|++.+++..++||||+++|
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            35678899999999999998778899999997653 34468999999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       194 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|.+++.... ..+++..+..++.||+.||+|||++||+||+
T Consensus        85 ~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~d  125 (258)
T d1k2pa_          85 CLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRD  125 (258)
T ss_dssp             EHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSC
T ss_pred             cHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCccccc
Confidence            9999975433 4588999999999999999999999999996

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-26  Score=179.32  Aligned_cols=121  Identities=23%  Similarity=0.338  Sum_probs=107.4

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.+...   +......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            366778999999999999976 46889999998643   23345678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++|||||+
T Consensus        87 y~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~ivHrD  131 (263)
T d2j4za1          87 YAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRD  131 (263)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             ecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeee
Confidence            99999999999543  4589999999999999999999999999996

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2e-26  Score=183.38  Aligned_cols=122  Identities=26%  Similarity=0.391  Sum_probs=103.9

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC-hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      ..|++.+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3467789999999999999975 468899999997552 23345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |++|+|.+++...  ..+++.++..++.||+.||+|||+++||||+
T Consensus        89 ~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrD  132 (307)
T d1a06a_          89 VSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRD  132 (307)
T ss_dssp             CCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEE
Confidence            9999999999543  5699999999999999999999999999996

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=2.5e-26  Score=185.86  Aligned_cols=122  Identities=27%  Similarity=0.419  Sum_probs=110.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|++.+.||+|+||.||++.. .+|..||||.+........+.+.+|+.+++.++||||+++++++.+.+..++|||||+
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            567789999999999999975 4688999999987766666789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++..+..++.||+.||+|||++|||||+
T Consensus       107 gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrD  149 (350)
T d1koaa2         107 GGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD  149 (350)
T ss_dssp             SCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeee
Confidence            99999998543 35699999999999999999999999999996

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-26  Score=181.62  Aligned_cols=119  Identities=24%  Similarity=0.381  Sum_probs=101.9

Q ss_pred             hhhhc-cCCCCceeEEEEEeC---CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          115 NFTTL-IGQGAFGPVYKAQMS---TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       115 ~~~~~-lg~G~~g~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+.+. ||+|+||.||+|.+.   ++..||||.+... .....+.|.+|+.++++++||||++++|++.++ ..++||||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~~lvmE~   89 (285)
T d1u59a_          11 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEM   89 (285)
T ss_dssp             EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEEC
T ss_pred             EECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-eEEEEEEe
Confidence            34454 999999999999653   3447999999765 445567899999999999999999999998654 57899999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++.++..++.||+.||+|||+++|+||+
T Consensus        90 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrD  134 (285)
T d1u59a_          90 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRD  134 (285)
T ss_dssp             CTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCc
Confidence            9999999998543 35699999999999999999999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.93  E-value=4.7e-26  Score=184.37  Aligned_cols=122  Identities=23%  Similarity=0.344  Sum_probs=109.5

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      .|++.+.||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++||||+++++++.+.+..++|||||+
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            467788999999999999975 5789999999987665566678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++.. ...++++.++..++.||+.||+|||++|||||+
T Consensus       110 gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRD  152 (352)
T d1koba_         110 GGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD  152 (352)
T ss_dssp             CCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            9999988743 334699999999999999999999999999996

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6e-26  Score=179.70  Aligned_cols=122  Identities=23%  Similarity=0.323  Sum_probs=108.4

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC------ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD------SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      ..|++.+.||+|+||.||++.. .+|+.||||.+...      .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3567789999999999999975 56899999998643      1223568999999999999999999999999999999


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|||||++|+|.+++...  ..+++..+..++.||+.||+|||+++|+||+
T Consensus        90 iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrD  138 (293)
T d1jksa_          90 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFD  138 (293)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecc
Confidence            999999999999999653  4699999999999999999999999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=5.2e-26  Score=181.05  Aligned_cols=123  Identities=24%  Similarity=0.279  Sum_probs=107.3

Q ss_pred             HHHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC---hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS---KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ...|...+.||+|+||.||+|.. .++..||||.+....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            45577778999999999999964 567889999997552   23345789999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||++|+|..++...  .++++.++..++.||+.||.|||++|||||+
T Consensus        94 ~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrD  140 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  140 (309)
T ss_dssp             EECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             EEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            9999999997766433  5699999999999999999999999999996

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.3e-27  Score=183.68  Aligned_cols=123  Identities=28%  Similarity=0.392  Sum_probs=108.3

Q ss_pred             HHHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       111 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      ..++.+.+.||+|+||.||+|...++..||||.+.... ...+.|.+|+.++++++|||||++++++.+ +..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEec
Confidence            45678889999999999999998777889999996543 345689999999999999999999999854 5578999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|..++.......+++.+++.++.||+.||+|||+++|+||+
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~D  138 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  138 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheeccc
Confidence            999999998665455699999999999999999999999999996

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.4e-26  Score=177.33  Aligned_cols=115  Identities=25%  Similarity=0.389  Sum_probs=98.5

Q ss_pred             hccCCCCceeEEEEEeCC---CCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcccC
Q 026630          118 TLIGQGAFGPVYKAQMST---GETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSK  192 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~---~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  192 (235)
                      +.||+|+||.||+|.+..   ++.||||.++..  +....+.|.+|+.++++++||||++++|+|.++ ..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            469999999999997532   457999999654  334456899999999999999999999998654 56899999999


Q ss_pred             CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          193 GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       193 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+|.+++...  ..+++.+++.++.||+.||+|||+++||||+
T Consensus        92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrD  132 (277)
T d1xbba_          92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRD  132 (277)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCCcccCC
Confidence            9999999654  4699999999999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=180.14  Aligned_cols=121  Identities=19%  Similarity=0.253  Sum_probs=106.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEccc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMS  191 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  191 (235)
                      +|.+.+.||+|+||.||+|.. .+++.+|+|.++.... ....+.+|+.+|+.++||||+++++++.+.+..|+|||||+
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            466778999999999999975 4678999999976533 33468899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          192 KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       192 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +|+|.+++... ...+++.++..++.||+.||+|||++||+||+
T Consensus        85 gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrD  127 (321)
T d1tkia_          85 GLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFD  127 (321)
T ss_dssp             CCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence            99999999543 24689999999999999999999999999996

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-26  Score=184.61  Aligned_cols=122  Identities=20%  Similarity=0.289  Sum_probs=108.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .+|.+.+.||+|+||.||++.. .++..||+|.++.. .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4566778999999999999975 46789999999765 344456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                      +++|+|.+++.+.  ..+++..+..++.||+.||.|||+ +||+||+
T Consensus        86 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRD  130 (322)
T d1s9ja_          86 MDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRD  130 (322)
T ss_dssp             CTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccc
Confidence            9999999999643  458999999999999999999997 5999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.5e-26  Score=179.17  Aligned_cols=121  Identities=21%  Similarity=0.283  Sum_probs=107.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|++.+.||+|+||.||++.. .++..||||.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            467889999999999999975 46889999999753   23345678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  +.+++..+..++.|++.||+|||+++||||+
T Consensus        89 y~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrD  133 (288)
T d1uu3a_          89 YAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRD  133 (288)
T ss_dssp             CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCc
Confidence            99999999998543  5699999999999999999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-25  Score=174.12  Aligned_cols=119  Identities=27%  Similarity=0.345  Sum_probs=102.9

Q ss_pred             hhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe----CCEEEEEE
Q 026630          115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE----KGQHMLVY  187 (235)
Q Consensus       115 ~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~  187 (235)
                      .+.+.||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+.++++++||||+++++++.+    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            3456799999999999975 46789999998754  44455679999999999999999999999865    34679999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV--SCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~--ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+++  |+||+
T Consensus        92 E~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrD  139 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRD  139 (270)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSC
T ss_pred             eCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCC
Confidence            999999999999643  46899999999999999999999999  99996

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-26  Score=183.14  Aligned_cols=128  Identities=28%  Similarity=0.480  Sum_probs=105.8

Q ss_pred             HHHHHHhhhhhccCCCCceeEEEEEeCC-C-----CEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEe
Q 026630          108 DLQKATCNFTTLIGQGAFGPVYKAQMST-G-----ETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE  179 (235)
Q Consensus       108 ~l~~~~~~~~~~lg~G~~g~v~~~~~~~-~-----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~  179 (235)
                      ++++.++.+.+.||+|+||.||+|.... +     ..||+|.+... .......+.+|+.++.++ +|||||++++++.+
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~  112 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  112 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee
Confidence            4556677888999999999999997532 2     26899998654 444556789999999988 89999999999999


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDEN---------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+..++|||||++|+|.++++...                     ...+++..++.++.||+.||+|||+++||||+
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRD  189 (325)
T d1rjba_         113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  189 (325)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            999999999999999999996532                     13588999999999999999999999999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.7e-27  Score=181.48  Aligned_cols=121  Identities=32%  Similarity=0.476  Sum_probs=103.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEEEEEcc
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYVFM  190 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~  190 (235)
                      .++.+.+.||+|+||.||+|.+ .+..||||.++.+  ...+.|.+|+.++++++||||++++|++.+ .+..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            3456778899999999999998 5789999999654  334679999999999999999999999854 45679999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+|.+++.......+++..++.++.||+.||.|||+++|+||+
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~d  128 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  128 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccc
Confidence            999999999654434589999999999999999999999999996

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=2e-25  Score=175.01  Aligned_cols=121  Identities=21%  Similarity=0.214  Sum_probs=106.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh---------hcHHHHHHHHHHHccCC-CCCccceeeEEEeCC
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK---------QGEKEFQTEVMLLGRLH-HRNLVNLVGYCAEKG  181 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~  181 (235)
                      +|++.+.||+|+||.||++.. .+++.+|||.+.....         ...+.+.+|+.++++++ ||||+++++++.+++
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            456778999999999999965 5688999999975421         12346889999999996 999999999999999


Q ss_pred             EEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..++||||+++|||.+++...  .++++.++..++.||+.||+|||++||+||+
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHrD  135 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRD  135 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence            999999999999999999653  5699999999999999999999999999996

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-25  Score=176.73  Aligned_cols=122  Identities=26%  Similarity=0.443  Sum_probs=105.7

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCC-----CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTG-----ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      ++...++||+|+||.||+|.+...     ..||||.+... .......|.+|+.+++.++||||++++|++.+.+..+++
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            345678899999999999976432     36999999755 444556799999999999999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+.+|++.+++... ...+++.+++.++.||+.||+|||+++|+||+
T Consensus        88 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrD  135 (283)
T d1mqba_          88 TEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRD  135 (283)
T ss_dssp             EECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhccccccccCc
Confidence            9999999999888553 35699999999999999999999999999996

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=174.28  Aligned_cols=123  Identities=21%  Similarity=0.255  Sum_probs=99.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--CCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--KGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~  187 (235)
                      .|++.+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++++++||||+++++++.+  .+..++||
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivm   84 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   84 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEE
Confidence            456778999999999999965 56889999999765  34445678999999999999999999999864  45689999


Q ss_pred             EcccCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-----ccccC
Q 026630          188 VFMSKGSLASHLYDE--NYGPLTWNLRVHIALDVARGLEYLHDGV-----SCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~-----ivHr~  235 (235)
                      ||+++|+|.+++...  ....+++..+..++.||+.||+|||+++     ||||+
T Consensus        85 Ey~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrD  139 (269)
T d2java1          85 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD  139 (269)
T ss_dssp             ECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred             ecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCc
Confidence            999999999998532  2356999999999999999999999876     99996

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-25  Score=177.76  Aligned_cols=129  Identities=26%  Similarity=0.412  Sum_probs=111.3

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEe------CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      ++++..++.+.+.||+|+||.||+|++      ..+..||||.+... .......|.+|+.+++.+ +||||+++++++.
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            456667888899999999999999975      23458999999765 444556799999999998 7999999999999


Q ss_pred             eCCEEEEEEEcccCCChhhhhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EKGQHMLVYVFMSKGSLASHLYDEN----------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+..+++|||+++|+|.++++...                ...+++..+..++.||+.||+|||++++|||+
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrD  170 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD  170 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999999999999999999986432                23588999999999999999999999999996

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6e-25  Score=176.74  Aligned_cols=121  Identities=25%  Similarity=0.294  Sum_probs=107.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+.+.   .....+.+.+|+.+|+.++||||+++++.+.+.+..++|||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccccee
Confidence            356778999999999999975 57899999999754   23345678899999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|.+++...  ..+++..+..++.||+.||+|||++|||||+
T Consensus        86 y~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRD  130 (337)
T d1o6la_          86 YANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRD  130 (337)
T ss_dssp             CCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             ccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccc
Confidence            99999999999653  4589999999999999999999999999996

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=4.8e-25  Score=173.08  Aligned_cols=121  Identities=21%  Similarity=0.262  Sum_probs=105.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC----EEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~  184 (235)
                      +|.+.+.||+|+||.||++.. .+++.||+|.++..   +......|.+|+.+++.++||||+++++++...+    ..|
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence            466778999999999999974 57889999999754   3344557899999999999999999999986643    478


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++|+|.+++...  ..+++.++..++.||+.||+|||++|||||+
T Consensus        88 lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrD  136 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRD  136 (277)
T ss_dssp             EEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcc
Confidence            999999999999988543  4689999999999999999999999999996

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=173.28  Aligned_cols=123  Identities=33%  Similarity=0.566  Sum_probs=103.0

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCC--EEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGE--TVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .+++.+.||+|+||.||+|.+. ++.  .||||.+... .....+.|.+|+.++.++ +||||+++++++.+.+..++||
T Consensus        11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~   90 (309)
T d1fvra_          11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI   90 (309)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEE
Confidence            3456788999999999999764 333  5778887644 344556799999999998 7999999999999999999999


Q ss_pred             EcccCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDE--------------NYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.++++..              ....+++.+++.++.||+.||.|||+++|+||+
T Consensus        91 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrD  152 (309)
T d1fvra_          91 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  152 (309)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccc
Confidence            999999999999643              235689999999999999999999999999996

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.2e-25  Score=173.08  Aligned_cols=125  Identities=22%  Similarity=0.313  Sum_probs=105.8

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeCC----CCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEE
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~  183 (235)
                      +++.++.+.+.||+|+||.||+|.+..    +..||+|.+... .....+.|.+|+.++++++||||+++++++.+ +..
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~   82 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV   82 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSC
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeE
Confidence            345567788999999999999997532    346888888654 44455679999999999999999999999864 568


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+++|+|.+++... ...+++.+++.++.||+.||+|||+++|+||+
T Consensus        83 ~iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrD  133 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRD  133 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhcccCeeccc
Confidence            9999999999999987543 35689999999999999999999999999996

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.4e-24  Score=173.27  Aligned_cols=121  Identities=21%  Similarity=0.283  Sum_probs=107.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      .|++.+.||+|+||.||++.. .+|..||+|.++..   .....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   84 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   84 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEee
Confidence            356778999999999999975 56899999999753   23445678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++|+|..++...  ..+++..+..++.||+.||+|||++|||||+
T Consensus        85 ~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~iiHrD  129 (316)
T d1fota_          85 YIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRD  129 (316)
T ss_dssp             CCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             ecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccCcEEccc
Confidence            99999999988544  4578889999999999999999999999996

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.5e-25  Score=173.45  Aligned_cols=129  Identities=29%  Similarity=0.449  Sum_probs=105.3

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeCC--------CCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMST--------GETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGY  176 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~  176 (235)
                      ++++..++.+.+.||+|+||.||+++...        +..||||.+..+ .......+.+|...+.++ +||||++++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            55666778888999999999999996421        237999999766 445557888999988888 89999999999


Q ss_pred             EEeCCEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          177 CAEKGQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       177 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |.+++..++||||+++|+|.+++....              ...+++.+++.++.||+.||+|||+++||||+
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrD  160 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD  160 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeee
Confidence            999999999999999999999996432              24589999999999999999999999999996

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-24  Score=173.15  Aligned_cols=121  Identities=21%  Similarity=0.301  Sum_probs=103.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHc-cCCCCCccceeeEEEeCCEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLG-RLHHRNLVNLVGYCAEKGQHMLVY  187 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~  187 (235)
                      .|.+.+.||+|+||.||+|.. .+++.||||.+...   .....+.+..|...+. .++||||+++++++.+.+..++||
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivm   82 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   82 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEE
Confidence            356778999999999999965 46889999999753   2234456677777654 689999999999999999999999


Q ss_pred             EcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          188 VFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       188 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||+++|+|.+++...  ..+++.++..++.||+.||+|||+++|+||+
T Consensus        83 Ey~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~iiHrD  128 (320)
T d1xjda_          83 EYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRD  128 (320)
T ss_dssp             ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             eecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            999999999999643  4589999999999999999999999999996

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.3e-24  Score=169.16  Aligned_cols=119  Identities=28%  Similarity=0.459  Sum_probs=102.1

Q ss_pred             hhhccCCCCceeEEEEEeCCC----CEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe-CCEEEEEEEc
Q 026630          116 FTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE-KGQHMLVYVF  189 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~  189 (235)
                      +.++||+|+||.||+|.+..+    ..||||.+... +....++|.+|+.++++++||||++++|++.. ++..++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            356899999999999986432    25899999754 55566789999999999999999999999865 5688999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|+|.+++... ...+++..++.++.|++.||.|||+++|+||+
T Consensus       111 ~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrD  155 (311)
T d1r0pa_         111 MKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRD  155 (311)
T ss_dssp             CTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             eecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhcccCcccCC
Confidence            9999999998643 35578889999999999999999999999996

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.2e-24  Score=169.36  Aligned_cols=122  Identities=26%  Similarity=0.377  Sum_probs=103.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCC--hhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDS--KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      .|.+.+.||+|+||.||+|.. .+++.||+|.+....  ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~   82 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   82 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEee
Confidence            345678899999999999975 568999999996542  23456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+ ++.+++.......+++..+..++.||+.||+|||++|||||+
T Consensus        83 ~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrD  127 (298)
T d1gz8a_          83 LHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  127 (298)
T ss_dssp             CSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccc
Confidence            975 555666555556799999999999999999999999999996

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.2e-24  Score=172.85  Aligned_cols=127  Identities=31%  Similarity=0.486  Sum_probs=108.6

Q ss_pred             HHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC
Q 026630          109 LQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG  181 (235)
Q Consensus       109 l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~  181 (235)
                      .++..+++.+.||+|+||.||+|++.      ++..||||.+... .....+.|.+|+.+++.++||||+++++++...+
T Consensus        10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~   89 (301)
T d1lufa_          10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK   89 (301)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence            34456677899999999999999753      3468999999765 3444567999999999999999999999999999


Q ss_pred             EEEEEEEcccCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          182 QHMLVYVFMSKGSLASHLYDEN----------------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       182 ~~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ..+++|||+++|+|.++++...                      ...+++..++.++.|++.||+|||++++|||+
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            9999999999999999985321                      23478999999999999999999999999996

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-24  Score=171.11  Aligned_cols=129  Identities=22%  Similarity=0.399  Sum_probs=110.0

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEe
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE  179 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~  179 (235)
                      +++...++.+.+.||+|+||.||+|.+.      .+..||||.+... .......|.+|+.++++++||||+++++.+..
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~   94 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   94 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec
Confidence            3555567778899999999999999752      2468999999754 44445679999999999999999999999998


Q ss_pred             CCEEEEEEEcccCCChhhhhhc--------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYD--------ENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~--------~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .+..++||||+++|+|.+++..        .....+++..+..++.|++.||.|||+++|+||+
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrD  158 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD  158 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeece
Confidence            8999999999999999999853        2234578999999999999999999999999996

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.3e-24  Score=168.71  Aligned_cols=122  Identities=29%  Similarity=0.400  Sum_probs=96.0

Q ss_pred             HHhhhhhccCCCCceeEEEEEeC--CC--CEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEE
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQMS--TG--ETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM  184 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~  184 (235)
                      .++++.+.||+|+||.||+|.+.  ++  ..||||.+...   .....+.|.+|+.++++++||||++++|++.+. ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            34567788999999999999753  22  36899998654   334456899999999999999999999999764 568


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||||+++|++.+++... ...+++..++.++.||+.||.|||+++|+||+
T Consensus        87 lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrD  136 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD  136 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeee
Confidence            999999999999888543 34599999999999999999999999999996

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=6.1e-24  Score=171.79  Aligned_cols=121  Identities=21%  Similarity=0.233  Sum_probs=107.8

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  188 (235)
                      +|++.+.||+|+||.||++.. .+|..||+|.+...   +....+.+.+|+.+++.++||||+++++.+.+....+++||
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            567778999999999999975 46899999998643   23445678999999999999999999999999999999999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+.+|+|.+++...  ..+++.++..++.||+.||.|||+++||||+
T Consensus       122 ~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRD  166 (350)
T d1rdqe_         122 YVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD  166 (350)
T ss_dssp             CCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCc
Confidence            99999999999543  4689999999999999999999999999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.90  E-value=5.6e-24  Score=167.70  Aligned_cols=121  Identities=26%  Similarity=0.304  Sum_probs=106.2

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      +|++.+.||+|+||.||+|...++..||||.+...  .....+.+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~   82 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             CceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEee
Confidence            35567889999999999998888999999999755  2333568999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .++.+..+..  ....+++..+..++.||+.||+|||+++||||+
T Consensus        83 ~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrD  125 (286)
T d1ob3a_          83 DQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD  125 (286)
T ss_dssp             SEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             hhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCcEEecC
Confidence            8877666653  346799999999999999999999999999996

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-23  Score=168.40  Aligned_cols=121  Identities=26%  Similarity=0.425  Sum_probs=100.6

Q ss_pred             HhhhhhccCCCCceeEEEEEeC-CCC----EEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMS-TGE----TVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      +|.+.+.||+|+||.||+|.+. +++    .||+|.+... .....+.|.+|+.++++++||||++++|+|.+. ..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence            3567789999999999999753 333    5899988654 445567899999999999999999999999865 45788


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +||+.+|+|.+++... ...+++..++.++.||+.||+|||+++||||+
T Consensus        89 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrD  136 (317)
T d1xkka_          89 TQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  136 (317)
T ss_dssp             EECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCc
Confidence            8999999999988654 35689999999999999999999999999996

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1e-23  Score=169.49  Aligned_cols=118  Identities=23%  Similarity=0.257  Sum_probs=99.7

Q ss_pred             Hhhhh-hccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEe----CCEEEE
Q 026630          113 TCNFT-TLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAE----KGQHML  185 (235)
Q Consensus       113 ~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~l  185 (235)
                      .|.+. ++||+|+||.||+|.. .+++.||||.++..     ..+.+|+.++.++ +||||+++++++.+    ....++
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i   86 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   86 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence            34444 5699999999999965 56899999998632     3567899886554 89999999999865    356899


Q ss_pred             EEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||||++|+|.+++.......+++.++..++.||+.||+|||++||+||+
T Consensus        87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRD  136 (335)
T d2ozaa1          87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD  136 (335)
T ss_dssp             EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence            99999999999999765445799999999999999999999999999996

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=1.3e-23  Score=170.76  Aligned_cols=120  Identities=24%  Similarity=0.289  Sum_probs=101.4

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC---ChhcHHHHHH---HHHHHccCCCCCccceeeEEEeCCEEEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD---SKQGEKEFQT---EVMLLGRLHHRNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~---e~~~l~~l~h~niv~~~~~~~~~~~~~lv  186 (235)
                      |.+.+.||+|+||.||++.. .++..||+|.+...   .......+.+   ++.+++.++||||+++++++.+.+..++|
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            56678999999999999975 46899999998643   1122223334   46778888999999999999999999999


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||++|||||+
T Consensus        86 mE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrD  132 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRD  132 (364)
T ss_dssp             ECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCcccee
Confidence            9999999999999653  4588999999999999999999999999996

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.5e-24  Score=167.67  Aligned_cols=117  Identities=29%  Similarity=0.345  Sum_probs=97.9

Q ss_pred             hhccCCCCceeEEEEEe-CCCCEEEEEEeecCChh-----cHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEcc
Q 026630          117 TTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ-----GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       117 ~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .++||+|+||.||+|.. .+++.||||.++.....     ..+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            36799999999999975 46889999998654221     1346889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++++..+.  .....+++..+..++.||+.||+|||++||+||+
T Consensus        83 ~~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrD  125 (299)
T d1ua2a_          83 ETDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD  125 (299)
T ss_dssp             SEEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             cchHHhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhccceeccc
Confidence            988776665  3345688899999999999999999999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.4e-23  Score=165.09  Aligned_cols=129  Identities=29%  Similarity=0.463  Sum_probs=103.7

Q ss_pred             HHHHHHHhhhhhccCCCCceeEEEEEeC------CCCEEEEEEeecC-ChhcHHHHHHHHHHHccC-CCCCccceeeEEE
Q 026630          107 KDLQKATCNFTTLIGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCA  178 (235)
Q Consensus       107 ~~l~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~  178 (235)
                      +++++.++.+.+.||+|+||.||+|.+.      +++.||||.+... .....+.+..|...+.++ +|+||+.+.+.+.
T Consensus         8 wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~   87 (299)
T d1ywna1           8 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   87 (299)
T ss_dssp             HBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence            3455667888899999999999999752      2357999998754 444556788888887777 7899999999886


Q ss_pred             eC-CEEEEEEEcccCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          179 EK-GQHMLVYVFMSKGSLASHLYDEN--------------YGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       179 ~~-~~~~lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      .. +..+++||||++|+|.++++...              ...+++.+++.++.||+.||+|||+++||||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrD  159 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD  159 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCc
Confidence            54 56899999999999999996431              23588999999999999999999999999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.5e-23  Score=161.20  Aligned_cols=121  Identities=25%  Similarity=0.302  Sum_probs=106.6

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCCEEEEEEEc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF  189 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  189 (235)
                      +|++.+.||+|+||.||+|.. .+++.||||.++..  .......+.+|+.+++.++||||+++.+.+.+....++++|+
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            356678999999999999975 56789999999755  334466889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          190 MSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       190 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +.+++|..++..  ...+++..+..++.|++.||+|||+++||||+
T Consensus        83 ~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrD  126 (292)
T d1unla_          83 CDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD  126 (292)
T ss_dssp             CSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcCCEeeec
Confidence            999998887743  35689999999999999999999999999996

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-22  Score=161.30  Aligned_cols=116  Identities=29%  Similarity=0.401  Sum_probs=96.7

Q ss_pred             HhhhhhccCCCCceeEEEEEeCCCCEEEEEEeecCChhcHHHHH--HHHHHHccCCCCCccceeeEEEeCC----EEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQ--TEVMLLGRLHHRNLVNLVGYCAEKG----QHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv  186 (235)
                      ++.+.+.||+|+||.||+|++ +|..||||.+....   ...+.  .|+..+..++||||+++++++.+.+    ..++|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            345668899999999999987 78899999986442   22333  4555566789999999999997643    67899


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD--------GVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~--------~~ivHr~  235 (235)
                      |||+++|+|.+++++.   .+++.+++.++.|++.||+|||+        ++||||+
T Consensus        80 ~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrD  133 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             EecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccc
Confidence            9999999999999653   48999999999999999999996        6999996

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.87  E-value=1.6e-22  Score=162.29  Aligned_cols=115  Identities=20%  Similarity=0.297  Sum_probs=100.3

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeC--CEEEEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEK--GQHMLVYV  188 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e  188 (235)
                      +|.+.+.||+|+||.||+|.. .+++.||+|.++...   .+.+.+|+.+|..+ +||||+++++++...  ...++|||
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            567789999999999999975 568899999986543   45788999999999 599999999998743  56899999


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      |+++++|..+.     ..+++.++..++.||+.||+|||++|||||+
T Consensus       113 ~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrD  154 (328)
T d3bqca1         113 HVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRD  154 (328)
T ss_dssp             CCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            99999998765     3589999999999999999999999999996

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-22  Score=162.51  Aligned_cols=120  Identities=20%  Similarity=0.248  Sum_probs=98.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC-ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC----EEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG----QHMLV  186 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv  186 (235)
                      +|.+.+.||+|+||.||+|.. .+++.||||.+... .....+.+.+|+.+|+.++||||+++++.+....    ..+++
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            356678999999999999964 57899999999754 3445567899999999999999999999986542    23455


Q ss_pred             EEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          187 YVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       187 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|+.+|+|.+++..   ..+++.++..++.||+.||+|||++|||||+
T Consensus        89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRD  134 (345)
T d1pmea_          89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRD  134 (345)
T ss_dssp             EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            566779999999954   3589999999999999999999999999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-22  Score=163.18  Aligned_cols=120  Identities=25%  Similarity=0.289  Sum_probs=101.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeC-----CEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK-----GQHM  184 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~  184 (235)
                      +|.+.+.||+|+||.||+|.. .+++.||||.+...  +....+.+.+|+.+++.++|||++++++++...     ...+
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            466778999999999999974 57899999999754  334455788999999999999999999998532     3446


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++||+.+|+|.+++..   ..+++..+..++.||+.||+|||++||+||+
T Consensus        99 ~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~giiHrD  146 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRD  146 (348)
T ss_dssp             EEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence            67788889999999943   4599999999999999999999999999996

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.5e-23  Score=160.44  Aligned_cols=121  Identities=21%  Similarity=0.292  Sum_probs=102.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCCh------hcHHHHHHHHHHHccCC--CCCccceeeEEEeCCEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSK------QGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEKGQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~  183 (235)
                      +|++.+.||+|+||.||+|.. .++..||||.+.....      .....+.+|+.++++++  ||||+++++++.+.+..
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            467788999999999999975 5689999999875311      11223668999999885  89999999999999999


Q ss_pred             EEEEEcccC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSK-GSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++||||+.+ +++.+++...  ..+++.++..++.||+.||+|||++||+||+
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrD  135 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRD  135 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             EEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            999999975 6777887543  4689999999999999999999999999996

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.6e-22  Score=161.27  Aligned_cols=119  Identities=26%  Similarity=0.321  Sum_probs=95.1

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEeCC------EE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKG------QH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~  183 (235)
                      +|.+.+.||+|+||.||+|.. .+++.||||.+...  .....+.+.+|+.+|+.++||||+++++++...+      ..
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence            456678899999999999975 56899999999754  3344567899999999999999999999997654      56


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+ +.+|..+...   ..+++..+..++.||+.||+|||++|||||+
T Consensus        99 ~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrD  146 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD  146 (346)
T ss_dssp             EEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             EEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence            9999999 5577777643   4599999999999999999999999999996

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.1e-22  Score=159.73  Aligned_cols=117  Identities=22%  Similarity=0.238  Sum_probs=97.0

Q ss_pred             hhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe------CCEEE
Q 026630          114 CNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE------KGQHM  184 (235)
Q Consensus       114 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~~  184 (235)
                      |++.+.||+|+||.||+|.. .+++.||||.++..  .......+.+|+.+++.++||||+++++++..      ....|
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            56678999999999999975 46899999999755  33445578899999999999999999999853      36889


Q ss_pred             EEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          185 LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       185 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ++|||+.+ ++.+.+.    ..+++..+..++.||+.||+|||++||+||+
T Consensus        99 iv~Ey~~~-~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrD  144 (355)
T d2b1pa1          99 LVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRD  144 (355)
T ss_dssp             EEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEeccch-HHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhccccccc
Confidence            99999976 5555552    3489999999999999999999999999996

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.4e-22  Score=161.02  Aligned_cols=119  Identities=25%  Similarity=0.330  Sum_probs=95.2

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccceeeEEEeC------CEEEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK------GQHML  185 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~l  185 (235)
                      +|+..++||+|+||.||++.. .+++.||||.+..+...    +.+|+.+++.++||||+++++++...      ...++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            345567899999999999975 46899999999765322    24799999999999999999998532      35789


Q ss_pred             EEEcccCCChhhhhh-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          186 VYVFMSKGSLASHLY-DENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       186 v~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ||||++++.+..+.. ......+++.++..++.||+.||+|||++||+||+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrD  147 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD  147 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence            999998754333321 12345699999999999999999999999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=156.16  Aligned_cols=122  Identities=28%  Similarity=0.356  Sum_probs=99.6

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecC--ChhcHHHHHHHHHHHccCCCCCccceeeEEEe--------C
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE--------K  180 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~  180 (235)
                      .+|.+.+.||+|+||.||+|.. .+++.||||.+...  .......+.+|+.+|+.++|||++++++.+..        .
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            4556778999999999999975 57899999998644  33445678999999999999999999998854        2


Q ss_pred             CEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          181 GQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       181 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +..+++|||+.++.+....  .....++......++.||+.||.|||++||+||+
T Consensus        90 ~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrD  142 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRD  142 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhccCCEEecC
Confidence            4578999999887665544  3445689999999999999999999999999996

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.1e-22  Score=158.71  Aligned_cols=121  Identities=22%  Similarity=0.252  Sum_probs=103.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe----CCCCEEEEEEeecC----ChhcHHHHHHHHHHHccCCC-CCccceeeEEEeCCEE
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM----STGETVAVKVLATD----SKQGEKEFQTEVMLLGRLHH-RNLVNLVGYCAEKGQH  183 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~  183 (235)
                      +|++.+.||+|+||.||++..    .+|..||+|.+...    +....+.+.+|+.++++++| |||+++++.+.+....
T Consensus        25 ~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~  104 (322)
T d1vzoa_          25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  104 (322)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCce
Confidence            367889999999999999964    24789999998643    22334567899999999966 8999999999999999


Q ss_pred             EEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          184 MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       184 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      +++|||+.+|+|.+++...  ..++......++.||+.||+|||+++||||+
T Consensus       105 ~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrD  154 (322)
T d1vzoa_         105 HLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRD  154 (322)
T ss_dssp             EEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             eeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEecc
Confidence            9999999999999999544  4577888999999999999999999999996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.1e-21  Score=154.10  Aligned_cols=123  Identities=24%  Similarity=0.313  Sum_probs=95.8

Q ss_pred             HHhhhhhccCCCCceeEEEEEe-CC-CCEEEEEEeecC--ChhcHHHHHHHHHHHccC---CCCCccceeeEEEe-----
Q 026630          112 ATCNFTTLIGQGAFGPVYKAQM-ST-GETVAVKVLATD--SKQGEKEFQTEVMLLGRL---HHRNLVNLVGYCAE-----  179 (235)
Q Consensus       112 ~~~~~~~~lg~G~~g~v~~~~~-~~-~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----  179 (235)
                      .+|.+.+.||+|+||.||++.. .+ ++.||||.++..  .......+.+|+.+++.+   +||||+++++++..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            3566778999999999999975 34 557999998643  222233456777766555   89999999999853     


Q ss_pred             CCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       180 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      ....++++||++++++.... ......+++..+..++.||+.||+|||+++||||+
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrD  141 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD  141 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecC
Confidence            24678999999887665444 33446689999999999999999999999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.82  E-value=3.5e-20  Score=146.19  Aligned_cols=119  Identities=17%  Similarity=0.151  Sum_probs=100.7

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCC-CCccceeeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH-RNLVNLVGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~  190 (235)
                      .|.+.+.||+|+||.||+|.. .+++.||+|.+......  ..+.+|++.++.++| +|++.+.+++......++||||+
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc--HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            466788999999999999975 46789999998654222  246678888888854 89999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                       +++|.+++... ...++......++.|++.||+|||++||+||+
T Consensus        84 -~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrD  126 (293)
T d1csna_          84 -GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD  126 (293)
T ss_dssp             -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             -CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHCCceecc
Confidence             67999988543 35689999999999999999999999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=6.5e-20  Score=145.01  Aligned_cols=119  Identities=19%  Similarity=0.236  Sum_probs=96.0

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCccce-eeEEEeCCEEEEEEEcc
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL-VGYCAEKGQHMLVYVFM  190 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-~~~~~~~~~~~lv~e~~  190 (235)
                      +|.+.+.||+|+||.||+|.. .+++.||||.+......  ..+..|+.+++.++|+|++.. .++....+..++||||+
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            366788999999999999975 46789999998755322  257789999999977765555 45557778899999999


Q ss_pred             cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          191 SKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       191 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                      . ++|...+... ...+++..+..++.|++.||+|||++|||||+
T Consensus        86 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrD  128 (299)
T d1ckia_          86 G-PSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  128 (299)
T ss_dssp             C-CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             C-Cchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            4 5776666433 35699999999999999999999999999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=6.9e-16  Score=124.65  Aligned_cols=122  Identities=20%  Similarity=0.260  Sum_probs=93.9

Q ss_pred             HhhhhhccCCCCceeEEEEEe-CCCCEEEEEEeecCChhcHHHHHHHHHHHccCC-----------CCCccceeeEEEe-
Q 026630          113 TCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-----------HRNLVNLVGYCAE-  179 (235)
Q Consensus       113 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~-  179 (235)
                      +|.+.+.||+|+||.||+|.. .+|+.||||.++.+. ...+.+.+|+.+++.++           |+||+++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            477889999999999999975 578999999997542 23456778888877664           5789999988754 


Q ss_pred             -CCEEEEEEEcccCCC-hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCccccC
Q 026630          180 -KGQHMLVYVFMSKGS-LASHLYDENYGPLTWNLRVHIALDVARGLEYLHD-GVSCHLF  235 (235)
Q Consensus       180 -~~~~~lv~e~~~~g~-L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~-~~ivHr~  235 (235)
                       ....+++++++..+. ............+++..+..++.||+.||+|||+ +||+||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrD  151 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD  151 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSC
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCccccc
Confidence             456667777665443 3333334455678999999999999999999997 9999996

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.62  E-value=4.6e-16  Score=114.71  Aligned_cols=107  Identities=10%  Similarity=0.053  Sum_probs=81.2

Q ss_pred             hhhccCCCCceeEEEEEeCCCCEEEEEEeecCCh------------------hcHHHHHHHHHHHccCCCCCccceeeEE
Q 026630          116 FTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK------------------QGEKEFQTEVMLLGRLHHRNLVNLVGYC  177 (235)
Q Consensus       116 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~~~~~~  177 (235)
                      +.+.||+|+||.||+|...+|..||||.++....                  ........|...+..+.|++++..++..
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4678999999999999877899999998753210                  0112345678888999999998877553


Q ss_pred             EeCCEEEEEEEcccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCccccC
Q 026630          178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHLF  235 (235)
Q Consensus       178 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~ivHr~  235 (235)
                          ..+++|||+++..+.++         +......++.|++.+|+|||++||+||+
T Consensus        84 ----~~~lvme~~~~~~~~~l---------~~~~~~~i~~ql~~~l~~lH~~giiHrD  128 (191)
T d1zara2          84 ----GNAVLMELIDAKELYRV---------RVENPDEVLDMILEEVAKFYHRGIVHGD  128 (191)
T ss_dssp             ----TTEEEEECCCCEEGGGC---------CCSCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ----CCEEEEEeeccccccch---------hhHHHHHHHHHHHHHHHHHhhCCEEEcc
Confidence                23699999988665432         2233467899999999999999999997

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.34  E-value=0.00044  Score=51.49  Aligned_cols=100  Identities=15%  Similarity=0.060  Sum_probs=68.9

Q ss_pred             CceeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccC-CCCCccceeeEEEeCCEEEEEEEcccCCChhhhhhcC
Q 026630          124 AFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE  202 (235)
Q Consensus       124 ~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  202 (235)
                      +.+.||+... ++..+.+|............+.+|...+..+ .+--+++++....+.+..++||+++++.++.+.....
T Consensus        26 s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~  104 (263)
T d1j7la_          26 SPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE  104 (263)
T ss_dssp             SSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC
T ss_pred             CCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc
Confidence            3467898875 5667788887654333333466777776655 3444677888888888999999999998886654211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          203 NYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       203 ~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                             .....++.+++..++.||+...
T Consensus       105 -------~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_         105 -------QSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHTSCC
T ss_pred             -------ccHHHHHHHHHHHHHHHhccCc
Confidence                   1234467888889999997653

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.55  E-value=0.12  Score=37.27  Aligned_cols=98  Identities=18%  Similarity=0.124  Sum_probs=64.3

Q ss_pred             cCCCCc-eeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCC--CCCccceeeEEEeCCEEEEEEEcccCCChh
Q 026630          120 IGQGAF-GPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH--HRNLVNLVGYCAEKGQHMLVYVFMSKGSLA  196 (235)
Q Consensus       120 lg~G~~-g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~L~  196 (235)
                      +..|.. +.||+.....+..+++|..+.....   .+..|...+..+.  .-.++++++...+.+..+++|+++++.++.
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~---~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGALN---ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCCEEEEEECSCTTS---CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCcccCCeEEEEEeCCCCEEEEEeCCccCHh---HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            444443 5789988777777888987654332   3456666665552  334667787777778889999999886653


Q ss_pred             hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 026630          197 SHLYDENYGPLTWNLRVHIALDVARGLEYLHDGV  230 (235)
Q Consensus       197 ~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  230 (235)
                      +.       ..+.   ...+.+++..|+-||+..
T Consensus        95 ~~-------~~~~---~~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          95 SS-------HLAP---AEKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             TS-------CCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             cc-------cccH---HHHHHHHHHHHHHHccCC
Confidence            32       1222   234567788888898654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=89.27  E-value=0.96  Score=34.94  Aligned_cols=76  Identities=14%  Similarity=0.071  Sum_probs=45.4

Q ss_pred             hccCCCCceeEEEEEeCC-CCEEEEEEeecC-------ChhcHHHHHHHHHHHccC-CC--CCccceeeEEEeCCEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMST-GETVAVKVLATD-------SKQGEKEFQTEVMLLGRL-HH--RNLVNLVGYCAEKGQHMLV  186 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~-------~~~~~~~~~~e~~~l~~l-~h--~niv~~~~~~~~~~~~~lv  186 (235)
                      +.||.|....||+....+ ++.+++|.-...       -+........|...+..+ .+  ..+++++.+  +.+..+++
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            458999999999997543 578889875431       111222344577666655 22  344555443  44455789


Q ss_pred             EEcccCCCh
Q 026630          187 YVFMSKGSL  195 (235)
Q Consensus       187 ~e~~~~g~L  195 (235)
                      ||++++..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999976543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=81.85  E-value=6.4  Score=29.03  Aligned_cols=68  Identities=15%  Similarity=0.127  Sum_probs=43.1

Q ss_pred             eeEEEEEeCCCCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCcc--ceee-----EEEeCCEEEEEEEcccCCC
Q 026630          126 GPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV--NLVG-----YCAEKGQHMLVYVFMSKGS  194 (235)
Q Consensus       126 g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv--~~~~-----~~~~~~~~~lv~e~~~~g~  194 (235)
                      -.||+.+..+|..+++|..+... ...+.+..|...+..|...++.  ..+.     .....+..+.++++++|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            46999988889999999987542 2334566777766665322221  1111     2244567888999997743

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=80.32  E-value=5  Score=30.58  Aligned_cols=98  Identities=17%  Similarity=0.273  Sum_probs=60.3

Q ss_pred             hccCCCCceeEEEEEeCC--------CCEEEEEEeecCChhcHHHHHHHHHHHccCCCCCc-cceeeEEEeCCEEEEEEE
Q 026630          118 TLIGQGAFGPVYKAQMST--------GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL-VNLVGYCAEKGQHMLVYV  188 (235)
Q Consensus       118 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e  188 (235)
                      +.|+-|-.-.+|+....+        ...++++..- .. ....+..+|..+++.+.-.++ +++++.+.+    ++|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            457778888899987543        2456666653 22 222345678888877743333 466666532    58899


Q ss_pred             cccCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q 026630          189 FMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS  231 (235)
Q Consensus       189 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~i  231 (235)
                      |+++..+...-       +   ....+..+++..|+-+|...+
T Consensus       122 fi~g~~l~~~d-------~---~~~~~~~~iA~~La~lH~~~~  154 (395)
T d1nw1a_         122 YIPSRPLSCHE-------I---SLAHMSTKIAKRVAKVHQLEV  154 (395)
T ss_dssp             CCCEEECCTTG-------G---GSHHHHHHHHHHHHHHTTCCC
T ss_pred             EeccccCChhh-------c---cchhhhHHHHHHHHHHhhccc
Confidence            99874442111       1   123467788888999998654