Citrus Sinensis ID: 026657

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDASR
Secondary Structure (PSIPRED)
cHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccHHHHHHHHHHHHHccHHHcccEEEEccccccHHHHHHccccccccccccEEEEccccHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccHHHHHHHHHHHcccccHHHcEEEEEEccHHHHHHHHHHHHHccHccHcEEEEEcccHHHHHHHHHccHHHccHHHccccEcEccccccccccccccc
Coil and Loop (DISEMBL)
mrnsvqklgsstgkygdptLMRFLIARSMDSEKAARMFVQWQKWRatmvpngfiadsevpdeleprKIFLQgltkdglplLVIQVrkhfpskdplqFKKFVVHLLDKTIassfrgsevgneKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDigeevlpeeyggraklvavqdvtlpqledasr
Flexible Loop (DISEMBL)
mrnsvqklgsstgkygdptLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIassfrgsevgneKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEkivivtneeemKNFVKDIGEEVLpeeyggraklvavqdvtlpqledasr
Low Complexity Region (SEG)
MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDASR
Disordered region (IsUnstruct)
******************TLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVT*********
Disordered Region (DISOPRED)
MRNSV****SSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIAS*******GNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVT**Q******
Disordered Region (DISEMBL)
**********STGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDASR
Disordered Region (DISPRO)
MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQL*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDASR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
P33324	310	CRAL-TRIO domain-containi	yes	no	0.876	0.664	0.310	2e-15
Q10137	286	Sec14 cytosolic factor OS	yes	no	0.902	0.741	0.264	4e-12
Q06705	408	Phosphatidylinositol tran	no	no	0.804	0.463	0.272	4e-11
P45816	492	SEC14 cytosolic factor OS	no	no	0.834	0.398	0.292	1e-10
Q757H2	436	Phosphatidylinositol tran	yes	no	0.821	0.442	0.277	2e-10
P24280	304	SEC14 cytosolic factor OS	no	no	0.859	0.664	0.276	3e-10
Q75DK1	308	SEC14 cytosolic factor OS	no	no	0.872	0.665	0.260	8e-10
P24859	301	SEC14 cytosolic factor OS	no	no	0.859	0.671	0.253	1e-09
P53989	302	SEC14 cytosolic factor OS	no	no	0.842	0.655	0.244	1e-09
P46250	301	SEC14 cytosolic factor OS	N/A	no	0.889	0.694	0.261	1e-09

>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 23/229 (10%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRK--------- 67
           D TL+RFL AR  D   +  MFV+ ++WR     N  I D E   E E ++         
Sbjct: 51  DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYP 110

Query: 68  IFLQGLTKDGLPLLV-----IQVRKHFPSKDPLQF-----KKFVVHLLDKTIASSFRGSE 117
            +   + KDG PL       I ++K +      Q      K++ +    +  A S R   
Sbjct: 111 QYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGY 170

Query: 118 VGNEKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRM 175
           +     T +LDL+ IS  N   V   I     + Q YYPER+ K YI+H P  F ++++M
Sbjct: 171 LIETSCT-VLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKM 229

Query: 176 VSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQD 224
           V   L+  T+ KI I+ +  + K  +K I  E LP +YGG + L    D
Sbjct: 230 VKPFLDPVTVSKIFILGSSYK-KELLKQIPIENLPVKYGGTSVLHNPND 277

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1

 Score = 71.6 bits (174), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 26/238 (10%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           MR  +QKLG  T +  D TL+RFL AR  + +++  MF++ +KWR     +  I +    
Sbjct: 35  MRLELQKLGY-TERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYD 93

Query: 61  DELEPRKIFLQGLTK---DGLPLLV-----IQVRKHFPSKDPLQFKKFVVH----LLDKT 108
           ++    K + Q   K   DG P+ V     I ++K +    P +  + +V+    L  K 
Sbjct: 94  EKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKR 153

Query: 109 IASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFL-------QAYYPERLAKLY 161
             +  R +    E    I+DL     K V +  + + + ++       Q YYPER+ K Y
Sbjct: 154 FPACSRKAGGLIETSCTIMDL-----KGVGITSIHSVYSYIRQASSISQDYYPERMGKFY 208

Query: 162 ILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
           +++ P  F S + ++   L+ AT++KI I+ +  +    ++ I  + LP + GG  + 
Sbjct: 209 VINAPWGFSSAFNLIKGFLDEATVKKIHILGSNYK-SALLEQIPADNLPAKLGGNCQC 265

Has a direct role in controlling cell septation and in forespore membrane formation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q06705|CSR1_YEAST Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 24/213 (11%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSE----------VPDELEPR 66
           D T+++F+ AR  +++K   M      WR   + N  I   E          V   LE +
Sbjct: 109 DATILKFIRARKWNADKTIAMLGHDLYWRKDTI-NKIINGGERAVYENNETGVIKNLELQ 167

Query: 67  KIFLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTA 125
           K  +QG   D  P+++++ R H  S    Q  +KF + ++++   S     E      T 
Sbjct: 168 KATIQGYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQ---SKLFFKENYPASTTI 224

Query: 126 ILDLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
           + DL   S  N+D   V+ +IT F+   A+YPE L  L I   P  F  +W ++   L+ 
Sbjct: 225 LFDLNGFSMSNMDYAPVKFLITCFE---AHYPESLGHLLIHKAPWIFNPIWNIIKNWLDP 281

Query: 183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
               KIV   N +E+  F++    + +P   GG
Sbjct: 282 VVASKIVFTKNIDELHKFIQ---PQYIPRYLGG 311

Non-classical phosphatidylinositol (PtdIns) transfer protein (PITP), which exhibits PtdIns-binding/transfer activity in the absence of detectable PtdCho-binding/transfer activity. Activates SPO14/PLD1 (phospholipase D1) by stimulating phosphoinositide synthesis via the STT4 PtdIns 4-kinase. Modulates ArfGAP function through effects on SPO14 activity. Inhibits phosphatidylcholine degradation by PLB1 (phospholipase B1). May also regulate post-Golgi membrane-trafficking events and have a role resistance to oxidative stress.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 23/219 (10%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQ---GL 73
           D TL+RFL AR  D   A  M+   +KWR     N  + D    ++ E  K++ Q     
Sbjct: 54  DATLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYKEKKEVAKLYPQYYHKT 113

Query: 74  TKDGLPLLVIQVRK---HFPSKDPLQ----------FKKFVVHLLDKTIASSFRGSEVGN 120
            KDG P+ V  V K   H   K   Q          ++ FV H L     S   G  +  
Sbjct: 114 DKDGRPVYVENVGKVNIHEMYKITTQERMLRNLVWEYESFVRHRL--PACSRVVGHLI-- 169

Query: 121 EKLTAILDLRQISYKNVD-VRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRMVSR 178
           E    ILDL+ +S  +   V G +     + Q YYPER+ K Y+++ P  F +V+ ++ R
Sbjct: 170 ETSCTILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKR 229

Query: 179 CLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRA 217
            L+  T+ KI +  +  + K  +  +    LP ++GG++
Sbjct: 230 FLDPVTVSKIHVYGSNYKEK-LLAQVPAYNLPIKFGGQS 267

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q757H2|CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)

Query: 15  YGDPTLMRFLIARSMDSEKAARMFVQWQKWRATM-VPNGFIADSE----------VPDEL 63
           Y D  L+RF+ AR  D  KA  M     +WR     P   +   E          +  +L
Sbjct: 136 YPDNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQL 195

Query: 64  EPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKL 123
           E  K  ++G  K+G P++ ++ R H  + D  + +     LL    A  F       +  
Sbjct: 196 ELGKATVRGFDKNGCPIVYVRPRLHHAA-DQTEAETSEYSLLIIEQARLFLKEPC--DTA 252

Query: 124 TAILDLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           T + DL   S  N+D   V+ +IT F+   A+YPE L KL+I   P  F  +W ++   L
Sbjct: 253 TILFDLSGFSMANMDYAPVKFLITCFE---AHYPECLGKLFIHKAPWIFPPIWNIIKNWL 309

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGR 216
           +     KI       +++ F   I  E +P E GG+
Sbjct: 310 DPVVAAKIAFTKTAADLEEF---IPAEQIPLELGGK 342

Non-classical phosphatidylinositol (PtdIns) transfer protein (PITP), which exhibits PtdIns-binding/transfer activity in the absence of detectable PtdCho-binding/transfer activity. May also regulate post-Golgi membrane-trafficking events and have a role resistance to oxidative stress.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 15/217 (6%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQ---GL 73
           D TL+RFL AR  D + A  MF   +KWR     +  + D    ++    K + Q     
Sbjct: 55  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 114

Query: 74  TKDGLPLLVIQ---VRKHFPSK---DPLQFKKFVVH---LLDKTIASSFRGSEVGNEKLT 124
            KDG P+   +   V  H  +K   +    K  V     ++   + +  R +    E   
Sbjct: 115 DKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSC 174

Query: 125 AILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
            I+DL+ IS  +   V   +    ++ Q YYPER+ K YI++ P  F + +R+    L+ 
Sbjct: 175 TIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDP 234

Query: 183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
            T+ KI I+ +  + K  +K I  E LP ++GG++++
Sbjct: 235 VTVSKIFILGSSYQ-KELLKQIPAENLPVKFGGKSEV 270

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Essential for viability and secretion.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2

 Score = 64.3 bits (155), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 29/234 (12%)

Query: 5   VQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELE 64
           V K    T +  D TL+RFL AR  D   A  MF   +KWR     +    D    ++  
Sbjct: 41  VLKQAGFTKRLDDSTLLRFLRARKFDVAAARAMFENCEKWRKENGVDTIFEDFHYEEKPL 100

Query: 65  PRKIFLQ---GLTKDGLPLLV-------------IQVRKHFPSKDPLQFKKFVVHLLDKT 108
             K + Q      KDG P+ +             I  ++        +++ F  + L   
Sbjct: 101 VAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERMLKNLIWEYESFSRYRL--- 157

Query: 109 IASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGF-----QFLQAYYPERLAKLYIL 163
             +S R ++   E    ILDL+ IS   +     +  +        Q YYPER+ K Y++
Sbjct: 158 -PASSRQADCLVETSCTILDLKGIS---ISAAAQVLSYVREASNIGQNYYPERMGKFYMI 213

Query: 164 HMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRA 217
           + P  F + +R+    L+  T+ KI I+ +  + K  +K I  E LP ++GG++
Sbjct: 214 NAPFGFSAAFRLFKPFLDPVTVSKIFILGSSYQ-KELLKQIPAENLPVKFGGQS 266

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 23/225 (10%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTK- 75
           D TL+RFL AR  D E +  M+   +KWR     +    D    ++    K + Q   K 
Sbjct: 53  DSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPLVAKYYPQYYHKT 112

Query: 76  --DGLPLLV-------------IQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
             DG P+ +             I  ++        +++ FV + L     +  R +    
Sbjct: 113 DNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRL----PACSRKAGYLV 168

Query: 121 EKLTAILDLRQISYKNVD--VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSR 178
           E    ILDL+ IS  +    +  +       Q YYPER+ K Y+++ P  F + +R+   
Sbjct: 169 ETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKP 228

Query: 179 CLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQ 223
            L+  T+ KI I+ +  + K+ +K I  E LP+++GG++++   +
Sbjct: 229 FLDPVTVSKIFILGSSYQ-KDLLKQIPAENLPKKFGGQSEVSEAE 272

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 23/221 (10%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIAD---SEVPDELEPRKIFLQGL 73
           D TL+RFL AR  D   A  MF   +KWR     N  + D    E P   +    +    
Sbjct: 53  DSTLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIMQDFHYDEKPLVAKYYPQYYHKT 112

Query: 74  TKDGLPLLVIQVRKHFPSKDPLQFKKFVVH-------------LLDKTIASSFRGSEVGN 120
            KDG P+      +   + +  + +K                 +++  + +  R +    
Sbjct: 113 DKDGRPVYF----EELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLV 168

Query: 121 EKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRMVSR 178
           E    ++DL+ IS  +   V   +    ++ Q YYPER+ K Y+++ P  F + +R+   
Sbjct: 169 ETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKP 228

Query: 179 CLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
            L+  T+ KI I+ +  +    +K I  E LP ++GG++++
Sbjct: 229 FLDPVTVSKIFILGSSYQ-SELLKQIPAENLPSKFGGKSEV 268

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 24/233 (10%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIAD---S 57
            R  + +LG    +  D +L+RFL AR  D +KA  MFV  +KWR     N  + D    
Sbjct: 40  FRQQLTELGYK-DRLDDASLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYE 98

Query: 58  EVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVH-------------L 104
           E P   +    +     KDG P+   ++ K     D ++  K                 +
Sbjct: 99  EKPIVAKMYPTYYHKTDKDGRPVYFEELGK----VDLVKMLKITTQERMLKNLVWEYEAM 154

Query: 105 LDKTIASSFRGSEVGNEKLTAILDLRQISYKNV-DVRGMI-TGFQFLQAYYPERLAKLYI 162
               + +  R +    E    +LDL  IS  +  +V G +    +  Q YYPER+ K Y+
Sbjct: 155 CQYRLPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYL 214

Query: 163 LHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
           ++ P  F + +++    L+  T+ KI I+    + K  +K I  + LP ++GG
Sbjct: 215 INAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYK-KELLKQIPPQNLPVKFGG 266

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
359472684	243	PREDICTED: CRAL-TRIO domain-containing p	0.987	0.954	0.75	1e-102
255584967	243	aspartate semialdehyde dehydrogenase, pu	0.987	0.954	0.732	1e-100
297737622	262	unnamed protein product [Vitis vinifera]	0.978	0.877	0.739	1e-100
224099563	244	predicted protein [Populus trichocarpa]	0.982	0.946	0.761	4e-99
356499583	247	PREDICTED: phosphatidylinositol transfer	0.995	0.947	0.709	5e-99
224111428	235	predicted protein [Populus trichocarpa]	0.970	0.970	0.758	6e-99
217074872	249	unknown [Medicago truncatula] gi|3885024	0.957	0.903	0.747	3e-97
124484399	246	SEC14 cytosolic factor / phosphoglycerid	0.978	0.934	0.695	2e-92
388515887	216	unknown [Lotus japonicus]	0.910	0.990	0.714	1e-87
42571481	252	sec.4-like phosphatidylinositol transfer	0.974	0.908	0.682	2e-86

>gi|359472684|ref|XP_003631185.1| PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like [Vitis vinifera]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/232 (75%), Positives = 208/232 (89%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           MR SVQKLGSST KYGDPTLMRFLIARSMDSEKAA+MFVQWQKWRA +VP+GF+ +SE+ 
Sbjct: 12  MRKSVQKLGSSTEKYGDPTLMRFLIARSMDSEKAAKMFVQWQKWRAALVPDGFVPESEIR 71

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           +ELE RKI+LQGL+K+G P+++++  KHFPSKD LQFKKFV HLLDKTIASSF+G E+GN
Sbjct: 72  EELETRKIYLQGLSKNGYPVMIVKACKHFPSKDHLQFKKFVAHLLDKTIASSFKGREIGN 131

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL  ILDL+QI++KNVD RG+ITGFQFLQ+YYPERLA+ +IL+MPGFFVSVWRMVS  L
Sbjct: 132 EKLIGILDLQQITFKNVDARGLITGFQFLQSYYPERLARCFILNMPGFFVSVWRMVSYFL 191

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLED 232
           E+ATLEKIVIV+NE E ++F+K+IGEE LPEEYGGR+ L+A+QDVTL  LED
Sbjct: 192 EKATLEKIVIVSNEAERRDFIKEIGEEALPEEYGGRSNLIALQDVTLTPLED 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584967|ref|XP_002533195.1| aspartate semialdehyde dehydrogenase, putative [Ricinus communis] gi|223526993|gb|EEF29187.1| aspartate semialdehyde dehydrogenase, putative [Ricinus communis]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/232 (73%), Positives = 203/232 (87%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           +R SV+KLGSST +Y D TLMRFLIARSMD EKAA+MFVQWQKWRAT VPNGFI++SE+ 
Sbjct: 12  LRKSVEKLGSSTEEYKDATLMRFLIARSMDPEKAAKMFVQWQKWRATFVPNGFISESEIQ 71

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           DELE RK FLQGL+ +G P+ +++++ HFPSKD LQFKK+VVHLLDKTIASSFRG E+GN
Sbjct: 72  DELESRKAFLQGLSIEGYPVFLVKLKLHFPSKDHLQFKKYVVHLLDKTIASSFRGKEIGN 131

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL AI+DL+ ISYKN+D RG I GFQ LQAYYPERLAKLY+LHMP FFVSVW+M+SR L
Sbjct: 132 EKLIAIIDLQHISYKNIDARGFIAGFQCLQAYYPERLAKLYLLHMPRFFVSVWKMISRFL 191

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLED 232
           E+ATLEK++IV+N+EE +N +K+IGEE+LP+EYGGR KLVA QD  LPQLED
Sbjct: 192 EKATLEKVMIVSNDEERRNLIKEIGEEILPDEYGGRTKLVAFQDALLPQLED 243

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737622|emb|CBI26823.3| unnamed protein product [Vitis vinifera]

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/230 (73%), Positives = 204/230 (88%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           MR SVQKLGSST KYGDPTLMRFLIARSMDSEKAA+MFVQWQKWRA +VP+GF+ +SE+ 
Sbjct: 12  MRKSVQKLGSSTEKYGDPTLMRFLIARSMDSEKAAKMFVQWQKWRAALVPDGFVPESEIR 71

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           +ELE RKI+LQGL+K+G P+++++  KHFPSKD LQFKKFV HLLDKTIASSF+G E+GN
Sbjct: 72  EELETRKIYLQGLSKNGYPVMIVKACKHFPSKDHLQFKKFVAHLLDKTIASSFKGREIGN 131

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL  ILDL+QI++KNVD RG+ITGFQFLQ+YYPERLA+ +IL+MPGFFVSVWRMVS  L
Sbjct: 132 EKLIGILDLQQITFKNVDARGLITGFQFLQSYYPERLARCFILNMPGFFVSVWRMVSYFL 191

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQL 230
           E+ATLEKIVIV+NE E ++F+K+IGEE LPEEYGGR+ L+A+QD  L  L
Sbjct: 192 EKATLEKIVIVSNEAERRDFIKEIGEEALPEEYGGRSNLIALQDPPLSLL 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099563|ref|XP_002311533.1| predicted protein [Populus trichocarpa] gi|222851353|gb|EEE88900.1| predicted protein [Populus trichocarpa]

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 176/231 (76%), Positives = 200/231 (86%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           +R SV+KLGSST KYGDPTL+RFLIARSMD EKAA+MF QW +WRA  VPNG I DSEV 
Sbjct: 13  LRKSVEKLGSSTEKYGDPTLVRFLIARSMDPEKAAKMFAQWLQWRAAFVPNGSIPDSEVQ 72

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           DEL  RK+FLQGL++DG P+L+++  KHFPSKD LQFKKFVVHLLDK IASSF+G E+GN
Sbjct: 73  DELRRRKVFLQGLSRDGYPVLLVKANKHFPSKDQLQFKKFVVHLLDKAIASSFKGREIGN 132

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL AILDL+QI+YKN+D RG+ITGFQ LQAYYPERLAK +IL MP FFVSVWRMVSR L
Sbjct: 133 EKLIAILDLQQIAYKNIDARGLITGFQLLQAYYPERLAKCFILSMPWFFVSVWRMVSRFL 192

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLE 231
           E+ATLEK+VIVT+EEE   FVK+IGEEVLPEEYGGRA LVA QDVT+P LE
Sbjct: 193 EKATLEKVVIVTSEEERDFFVKEIGEEVLPEEYGGRAMLVAPQDVTVPPLE 243

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499583|ref|XP_003518618.1| PREDICTED: phosphatidylinositol transfer protein CSR1-like [Glycine max]

 Score =  366 bits (939), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 166/234 (70%), Positives = 205/234 (87%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           MR SV+KLGSS   YGDPTLMRFLIARSM+ +KAA+MF+QW+KWR+ MVPNGFI++SE+P
Sbjct: 12  MRKSVEKLGSSAEGYGDPTLMRFLIARSMEVDKAAKMFLQWKKWRSAMVPNGFISESEIP 71

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           DELE RKIFLQGL++D  P++++Q  +HF SKD +QFKKFVV+LLDKTIAS+F+G E+G 
Sbjct: 72  DELEARKIFLQGLSQDKFPVMIVQTNRHFASKDQIQFKKFVVYLLDKTIASAFKGREIGT 131

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL  I+DL+ ISYKN+D RG+ITGFQFLQAYYPERLAK Y+LHMP FFVSVW++VSR L
Sbjct: 132 EKLIGIIDLQNISYKNIDARGLITGFQFLQAYYPERLAKCYMLHMPWFFVSVWKLVSRFL 191

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDAS 234
           E+ATLEKIVIV+NE+E + FV+++GEEVLPE YGGRAKL A+QDV LP LE+ +
Sbjct: 192 EKATLEKIVIVSNEDETREFVREVGEEVLPEMYGGRAKLEAIQDVELPPLENGT 245

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111428|ref|XP_002315851.1| predicted protein [Populus trichocarpa] gi|222864891|gb|EEF02022.1| predicted protein [Populus trichocarpa]

 Score =  365 bits (938), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 173/228 (75%), Positives = 198/228 (86%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           +R SVQKLGSST  YGDPTLMRFLI+RSMD  KAA++FV+WQKWRA+ VPNG I DSEV 
Sbjct: 8   LRKSVQKLGSSTDTYGDPTLMRFLISRSMDPAKAAKLFVEWQKWRASFVPNGSIPDSEVE 67

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           DEL PRK+FL GL+KDG P+L+++  KHFPSKD LQFKKFVVHLLDKTIASSF+G E+GN
Sbjct: 68  DELGPRKVFLHGLSKDGYPVLLVKANKHFPSKDRLQFKKFVVHLLDKTIASSFKGREIGN 127

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL AILDL+ ISYKN+D RGMITGFQ LQ+YYP+RLAK +IL MP FFVS WRM+SR L
Sbjct: 128 EKLIAILDLQHISYKNIDARGMITGFQLLQSYYPDRLAKCFILSMPWFFVSFWRMISRFL 187

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLP 228
           E+ TLEKIVIVTN+EE K FVK+IGEEVLPEE GGRA LVA+QDVT+P
Sbjct: 188 EKGTLEKIVIVTNDEERKCFVKEIGEEVLPEELGGRATLVALQDVTVP 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074872|gb|ACJ85796.1| unknown [Medicago truncatula] gi|388502478|gb|AFK39305.1| unknown [Medicago truncatula]

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 169/226 (74%), Positives = 199/226 (88%), Gaps = 1/226 (0%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPN-GFIADSEV 59
           ++ SV+ LGSST  YGDPTLMRFLIARSMDS+KAA+MFVQWQKWRATMVPN GFI+DSEV
Sbjct: 13  LKKSVENLGSSTQGYGDPTLMRFLIARSMDSDKAAKMFVQWQKWRATMVPNDGFISDSEV 72

Query: 60  PDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVG 119
           PDELE RKIFLQGL+KD  P++++Q  +HFPSKD +QFKKF+VHLLDKTIAS+F+G EVG
Sbjct: 73  PDELETRKIFLQGLSKDKYPVMIVQASRHFPSKDQIQFKKFIVHLLDKTIASAFKGREVG 132

Query: 120 NEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRC 179
           NEKL  +LDL+ ISYKNVD RG+ITGFQFLQ+YYPE LAK YILHMP FFVSVWR VS  
Sbjct: 133 NEKLIGVLDLQGISYKNVDARGLITGFQFLQSYYPECLAKCYILHMPWFFVSVWRFVSGF 192

Query: 180 LERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDV 225
           L++AT EKIVI++NEEE K FV ++GE++LPEEYGGRAKLV +Q+V
Sbjct: 193 LDKATQEKIVIISNEEEKKLFVSEVGEDILPEEYGGRAKLVPIQEV 238

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124484399|dbj|BAF46310.1| SEC14 cytosolic factor / phosphoglyceride transfer family protein [Ipomoea nil]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/230 (69%), Positives = 196/230 (85%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
           +R SV+KLGSST  YGDPTLMRFLIAR+MD EKAA+MFVQW++WRA  VP G+I DSEVP
Sbjct: 13  IRKSVEKLGSSTESYGDPTLMRFLIARAMDPEKAAKMFVQWRQWRAAFVPLGYIPDSEVP 72

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGN 120
           DELE RKI LQGL+K+G P+++++ R HFP+KD LQFKKFVVHLLDKT+ASS +  E+G+
Sbjct: 73  DELESRKICLQGLSKNGFPVMIVKGRNHFPAKDQLQFKKFVVHLLDKTLASSSKDGEIGS 132

Query: 121 EKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCL 180
           EKL  I DL+ ISYKNVD R +ITGFQFLQAYYPERLAK Y+LHMP FFV+VW++VSR L
Sbjct: 133 EKLIGIFDLQHISYKNVDARVLITGFQFLQAYYPERLAKFYLLHMPLFFVAVWKLVSRFL 192

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQL 230
           E+ATLEKIVIV+NEEE    ++++GE+VLPEEYGG++K VA+QDV +  L
Sbjct: 193 EKATLEKIVIVSNEEERLQLMREVGEDVLPEEYGGKSKFVAMQDVVINPL 242

Source: Ipomoea nil

Species: Ipomoea nil

Genus: Ipomoea

Family: Convolvulaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515887|gb|AFK46005.1| unknown [Lotus japonicus]

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/214 (71%), Positives = 183/214 (85%)

Query: 21  MRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPL 80
           MRFLIAR MD +KAA+M VQW+KWR  MVP+G+I  SEV DELE RKIFLQGL+++  P+
Sbjct: 1   MRFLIARCMDPDKAAKMLVQWRKWREAMVPDGYIPSSEVQDELETRKIFLQGLSQEKHPV 60

Query: 81  LVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVR 140
           +++Q ++HFPSKD  QFKKFVV+LLDKTIAS+F+G E+GNEKL  ILDL+ +SYKN+D R
Sbjct: 61  MIVQAKRHFPSKDQPQFKKFVVYLLDKTIASAFKGREIGNEKLIGILDLQNLSYKNIDAR 120

Query: 141 GMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNF 200
           G+ITGFQFLQAYYPERLAK YILHMP FFVSVWR+VSR LERATLEKIVIVTNE+E   F
Sbjct: 121 GLITGFQFLQAYYPERLAKCYILHMPWFFVSVWRVVSRFLERATLEKIVIVTNEDERSKF 180

Query: 201 VKDIGEEVLPEEYGGRAKLVAVQDVTLPQLEDAS 234
           + ++GEEVLPEEYGG AKLVA+QDV L  LE+ +
Sbjct: 181 ISEVGEEVLPEEYGGNAKLVAIQDVDLTPLENGT 214

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571481|ref|NP_973831.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|222423966|dbj|BAH19945.1| AT1G14820 [Arabidopsis thaliana] gi|332191108|gb|AEE29229.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana]

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/230 (68%), Positives = 183/230 (79%), Gaps = 1/230 (0%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVP-NGFIADSEV 59
           +R SV+KL SST  Y  PTLMRFL+ARSMD  KAA+MFV WQKWRA+MVP  GFI +SEV
Sbjct: 12  LRKSVEKLSSSTEGYDKPTLMRFLVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEV 71

Query: 60  PDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVG 119
            DELE RK+ LQG TK G PL+++   KHF SKDP  FKKFVV+ LDKTIAS   G EVG
Sbjct: 72  QDELEFRKVCLQGPTKSGHPLVLVITSKHFASKDPANFKKFVVYALDKTIASGNNGKEVG 131

Query: 120 NEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRC 179
            EKL A++DL  I+YKN+D RG+ITGFQFLQ+YYPERLAK YILHMPGFFV+VW+ V R 
Sbjct: 132 GEKLVAVIDLANITYKNLDARGLITGFQFLQSYYPERLAKCYILHMPGFFVTVWKFVCRF 191

Query: 180 LERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQ 229
           LE+AT EKIVIVT+ EE + F ++IG + LPEEYGGRAKL A+QDV LPQ
Sbjct: 192 LEKATQEKIVIVTDGEEQRKFEEEIGADALPEEYGGRAKLTAIQDVLLPQ 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
TAIR|locus:2006732	252	AT1G14820 "AT1G14820" [Arabido	0.974	0.908	0.682	2.9e-80
TAIR|locus:2198135	255	AT1G01630 "AT1G01630" [Arabido	0.936	0.862	0.386	1.5e-37
DICTYBASE|DDB_G0275959	247	DDB_G0275959 "cellular retinal	0.812	0.773	0.282	4.7e-16
POMBASE|SPAC3H8.10	286	spo20 "sec14 cytosolic factor	0.919	0.755	0.267	6.9e-15
TAIR|locus:2025202	296	AT1G75170 "AT1G75170" [Arabido	0.902	0.716	0.266	1.4e-14
ASPGD|ASPL0000073101	327	AN4997 [Emericella nidulans (t	0.906	0.651	0.275	9.2e-14
SGD|S000004684	304	SEC14 "Phosphatidylinositol/ph	0.859	0.664	0.276	3.2e-13
CGD|CAL0001373	621	orf19.5711 [Candida albicans (	0.897	0.339	0.254	4.3e-13
TAIR|locus:2138606	301	AT4G08690 "AT4G08690" [Arabido	0.821	0.641	0.267	5.2e-13
SGD|S000004372	408	CSR1 "Phosphatidylinositol tra	0.808	0.465	0.273	8.4e-13

TAIR|locus:2006732 AT1G14820 "AT1G14820" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 157/230 (68%), Positives = 183/230 (79%)

Query:     1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVP-NGFIADSEV 59
             +R SV+KL SST  Y  PTLMRFL+ARSMD  KAA+MFV WQKWRA+MVP  GFI +SEV
Sbjct:    12 LRKSVEKLSSSTEGYDKPTLMRFLVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEV 71

Query:    60 PDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVG 119
              DELE RK+ LQG TK G PL+++   KHF SKDP  FKKFVV+ LDKTIAS   G EVG
Sbjct:    72 QDELEFRKVCLQGPTKSGHPLVLVITSKHFASKDPANFKKFVVYALDKTIASGNNGKEVG 131

Query:   120 NEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRC 179
              EKL A++DL  I+YKN+D RG+ITGFQFLQ+YYPERLAK YILHMPGFFV+VW+ V R 
Sbjct:   132 GEKLVAVIDLANITYKNLDARGLITGFQFLQSYYPERLAKCYILHMPGFFVTVWKFVCRF 191

Query:   180 LERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQ 229
             LE+AT EKIVIVT+ EE + F ++IG + LPEEYGGRAKL A+QDV LPQ
Sbjct:   192 LEKATQEKIVIVTDGEEQRKFEEEIGADALPEEYGGRAKLTAIQDVLLPQ 241

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=ISS

TAIR|locus:2198135 AT1G01630 "AT1G01630" [Arabidopsis thaliana (taxid:3702)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 87/225 (38%), Positives = 131/225 (58%)

Query:     1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
             MR    +    T +  D  + RFL AR +D EKA+ MF+ +  W+ +M+P G I ++E+ 
Sbjct:    34 MRALCDRQDPETKEVDDLMIRRFLRARDLDIEKASTMFLNYLTWKRSMLPKGHIPEAEIA 93

Query:    61 DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSK-DPLQFKKFVVHLLDKTIASSFRGSEVG 119
             ++L   K+ +QG  K G P+ V    +H PSK +P +FK+FVV+ L+K  A   RG E  
Sbjct:    94 NDLSHNKMCMQGHDKMGRPIAVAIGNRHNPSKGNPDEFKRFVVYTLEKICARMPRGQE-- 151

Query:   120 NEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRC 179
               K  AI DL+   Y N D+RG +     LQ  YPERL KLYI+H P  F++ W+++   
Sbjct:   152 --KFVAIGDLQGWGYSNCDIRGYLAALSTLQDCYPERLGKLYIVHAPYIFMTAWKVIYPF 209

Query:   180 LERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQD 224
             ++  T +KIV V N++     ++DI E  LP+ YGG+  LV +Q+
Sbjct:   210 IDANTKKKIVFVENKKLTPTLLEDIDESQLPDIYGGKLPLVPIQE 254

GO:0005215 "transporter activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0019344 "cysteine biosynthetic process" evidence=RCA

DICTYBASE|DDB_G0275959 DDB_G0275959 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 57/202 (28%), Positives = 98/202 (48%)

Query:    17 DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGF--IADSEVPDELEPRKIFLQGLT 74
             D   +RFL AR  + + +  M  +  K+RAT    G   I +S V +EL+  K +  G+ 
Sbjct:    40 DSMTLRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVD 99

Query:    75 KDGLPLLVIQVRKHFP-SKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQIS 133
             K G P+ +++  +H   ++D  +  ++ V++++    S  +    G E  T I D+   S
Sbjct:   100 KGGRPVCIVKTSRHDSYNRDLNESMRYCVYVMENG-KSMLKD---GIETCTLIFDMSDFS 155

Query:   134 YKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTN 193
              KN+D   +    +  Q +YPE L K  IL+ P  F+ +W ++   L+  T  K+  V  
Sbjct:   156 SKNMDYPLVKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFV-- 213

Query:   194 EEEMKNFVKDIGEEVLPEEYGG 215
               + K  V  I ++ L   YGG
Sbjct:   214 --KTKQLVDYIPKDQLESSYGG 233

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPAC3H8.10 spo20 "sec14 cytosolic factor family Sec14" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 62/232 (26%), Positives = 111/232 (47%)

Query:     1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
             MR  +QKLG  T +  D TL+RFL AR  + +++  MF++ +KWR     +  I +    
Sbjct:    35 MRLELQKLGY-TERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYD 93

Query:    61 DELEPRKIFLQGLTK---DGLPLLV-----IQVRKHFPSKDPLQFKKFVVHLLDKTIASS 112
             ++    K + Q   K   DG P+ V     I ++K +    P +  + +V+  +      
Sbjct:    94 EKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKR 153

Query:   113 FRGS--EVGN--EKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMP 166
             F     + G   E    I+DL+ +   ++  V   I     + Q YYPER+ K Y+++ P
Sbjct:   154 FPACSRKAGGLIETSCTIMDLKGVGITSIHSVYSYIRQASSISQDYYPERMGKFYVINAP 213

Query:   167 GFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAK 218
               F S + ++   L+ AT++KI I+ +  +    ++ I  + LP + GG  +
Sbjct:   214 WGFSSAFNLIKGFLDEATVKKIHILGSNYKSA-LLEQIPADNLPAKLGGNCQ 264

GO:0005628 "prospore membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006893 "Golgi to plasma membrane transport" evidence=IMP

GO:0008525 "phosphatidylcholine transporter activity" evidence=IDA

GO:0008526 "phosphatidylinositol transporter activity" evidence=ISO

GO:0010570 "regulation of filamentous growth" evidence=IMP

GO:0015031 "protein transport" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IGI

GO:0030437 "ascospore formation" evidence=IMP

GO:0032153 "cell division site" evidence=IDA

GO:0033205 "cell cycle cytokinesis" evidence=IMP

GO:0035838 "growing cell tip" evidence=IDA

GO:0051286 "cell tip" evidence=IDA

TAIR|locus:2025202 AT1G75170 "AT1G75170" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 60/225 (26%), Positives = 108/225 (48%)

Query:     1 MRNSVQKLGSSTGKY-GDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEV 59
             ++  + +L      Y  D  L R+L AR+ +  KA +M  +  KWR++  P   I  +EV
Sbjct:    27 LKTLIGQLSGRNSLYCSDACLKRYLEARNWNVGKAKKMLEETLKWRSSFKPEE-IRWNEV 85

Query:    60 PDELEPRKIFLQGL-TKDGLPLLVIQVRKHFPSKDPLQFK-KFVVHLLDKTIASSFRGSE 117
               E E  K++  G   + G  +L++  R    +   L+ + K +V+L++  I +      
Sbjct:    86 SGEGETGKVYKAGFHDRHGRTVLIL--RPGLQNTKSLENQMKHLVYLIENAILNL----P 139

Query:   118 VGNEKLTAILDLRQISYK-NVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMV 176
                E+++ ++D    S   +V ++        LQ +YPERLA  ++ + P  F + W++V
Sbjct:   140 EDQEQMSWLIDFTGWSMSTSVPIKSARETINILQNHYPERLAVAFLYNPPRLFEAFWKIV 199

Query:   177 SRCLERATLEKIVIV--TNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
                ++  T  K+  V   N E ++       EE LP E+GG+A L
Sbjct:   200 KYFIDAKTFVKVKFVYPKNSESVELMSTFFDEENLPTEFGGKALL 244

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=ISS

ASPGD|ASPL0000073101 AN4997 [Emericella nidulans (taxid:162425)]

 Score = 182 (69.1 bits), Expect = 9.2e-14, P = 9.2e-14
 Identities = 63/229 (27%), Positives = 109/229 (47%)

Query:     1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
             +R+ +++ G  T +    TL+RFL AR  D   A  MF+  +KWR     +      E  
Sbjct:    43 LRSELEQEGY-TERLDTLTLLRFLRARKFDVAAAKAMFIASEKWRKEFGTDDLARTFEYT 101

Query:    61 DELEPRKIFLQ---GLTKDGLPLLV-----IQVRK-HFPSKDPLQFKKFVVH---LLDKT 108
             ++ E  K + Q      KDG P+ +     I + +    + D    K  V     L D  
Sbjct:   102 EKPEVFKYYPQYYHKTDKDGRPVYIEKLGNINIAELQKITTDERMLKNLVTEYEKLADPR 161

Query:   109 IASSFRGSEVGNEKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMP 166
             + +  R +    E   +I+DL+ +   +   V G +     + Q YYPERL KLY+++ P
Sbjct:   162 LPACSRKAGKLLETCCSIIDLKGVGITSAPSVYGYLKMTSAVSQNYYPERLGKLYLINAP 221

Query:   167 GFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
               F +V+ +V   L+  T+ KI ++ +  + +  +K + +E LP++YGG
Sbjct:   222 WGFSTVFSVVKSFLDPVTVNKIHVLGSGYQSE-LLKQVPKENLPQQYGG 269

GO:0006896 "Golgi to vacuole transport" evidence=IEA

GO:1901352 "negative regulation of phosphatidylglycerol biosynthetic process" evidence=IEA

GO:2001246 "negative regulation of phosphatidylcholine biosynthetic process" evidence=IEA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0048194 "Golgi vesicle budding" evidence=IEA

GO:0031321 "ascospore-type prospore assembly" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

GO:0033205 "cell cycle cytokinesis" evidence=IEA

GO:0010570 "regulation of filamentous growth" evidence=IEA

GO:0008526 "phosphatidylinositol transporter activity" evidence=IEA

GO:0008525 "phosphatidylcholine transporter activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0032153 "cell division site" evidence=IEA

GO:0035838 "growing cell tip" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005628 "prospore membrane" evidence=IEA

SGD|S000004684 SEC14 "Phosphatidylinositol/phosphatidylcholine transfer protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 176 (67.0 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 60/217 (27%), Positives = 101/217 (46%)

Query:    17 DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQ---GL 73
             D TL+RFL AR  D + A  MF   +KWR     +  + D    ++    K + Q     
Sbjct:    55 DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 114

Query:    74 TKDGLPLLVIQ---VRKHFPSK---DPLQFKKFVVH---LLDKTIASSFRGSEVGNEKLT 124
              KDG P+   +   V  H  +K   +    K  V     ++   + +  R +    E   
Sbjct:   115 DKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSC 174

Query:   125 AILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
              I+DL+ IS  +   V   +    ++ Q YYPER+ K YI++ P  F + +R+    L+ 
Sbjct:   175 TIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDP 234

Query:   183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
              T+ KI I+ +  + K  +K I  E LP ++GG++++
Sbjct:   235 VTVSKIFILGSSYQ-KELLKQIPAENLPVKFGGKSEV 270

GO:0015914 "phospholipid transport" evidence=IMP;IDA

GO:2001246 "negative regulation of phosphatidylcholine biosynthetic process" evidence=IMP;IDA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IMP

GO:0046488 "phosphatidylinositol metabolic process" evidence=IGI;IMP

GO:0048194 "Golgi vesicle budding" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:1901352 "negative regulation of phosphatidylglycerol biosynthetic process" evidence=IMP

GO:0008526 "phosphatidylinositol transporter activity" evidence=IMP;IDA

GO:0008525 "phosphatidylcholine transporter activity" evidence=IMP;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IEA;IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006896 "Golgi to vacuole transport" evidence=IGI;IMP

GO:0005215 "transporter activity" evidence=IEA

GO:0030437 "ascospore formation" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IDA

CGD|CAL0001373 orf19.5711 [Candida albicans (taxid:5476)]

 Score = 182 (69.1 bits), Expect = 4.3e-13, P = 4.3e-13
 Identities = 58/228 (25%), Positives = 100/228 (43%)

Query:    17 DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVP-NGFIADSEVPDELE----------- 64
             D  ++RF+ AR  D+EKA  M  +   WR+   P + +  +++ P  L            
Sbjct:   317 DNLVLRFIRARKWDTEKAIEMLSKSLHWRSNDFPADDWAMEADGPSYLNGTNKGFIKNFT 376

Query:    65 PRKIFLQGLTKDGLPLLVIQVRKHFPSKDPL-QFKKFVVHLLDKTIASSFRGSEVGNEKL 123
               K +++G  K+  P+ + Q +KH  +  PL Q +++ V  ++ T       SE   +  
Sbjct:   377 TEKSWIKGRDKNNNPIFMFQAKKHLTADSPLEQNQRYAVVTIEWTRLFLREVSE-SVDTC 435

Query:   124 TAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERA 183
             T + DL   S KN D   +       +A+YPE L  + I + P  F +VW ++   L+  
Sbjct:   436 TIVFDLTGFSLKNADYATIKFLADVFEAHYPETLGFILIHNAPWIFSTVWNIIKNWLDPV 495

Query:   184 TLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLE 231
                KI    + +E+  F   I   ++P+  GG         +  PQ E
Sbjct:   496 VASKIHFTKDAKELSKF---IDPTLIPDYLGGEDTTRGFYPIPEPQDE 540

GO:0005768 "endosome" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008526 "phosphatidylinositol transporter activity" evidence=IEA

GO:2001247 "positive regulation of phosphatidylcholine biosynthetic process" evidence=IEA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=IEA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0045717 "negative regulation of fatty acid biosynthetic process" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

TAIR|locus:2138606 AT4G08690 "AT4G08690" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 5.2e-13, P = 5.2e-13
 Identities = 54/202 (26%), Positives = 93/202 (46%)

Query:    17 DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQG-LTK 75
             D  ++R+L AR+   +KA +M  +  KWR    P   I   EV  E E  KI+    + K
Sbjct:    43 DDAVLRYLRARNWHVKKATKMLKETLKWRVQYKPEE-ICWEEVAGEAETGKIYRSSCVDK 101

Query:    76 DGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYK 135
              G P+L+++     PS +  +  K  +  L   + ++ +    G E++  ++D    S  
Sbjct:   102 LGRPVLIMR-----PSVENSKSVKGQIRYLVYCMENAVQNLPPGEEQMVWMIDFHGYSLA 156

Query:   136 NVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEE 195
             NV +R        LQ +YPERLA   + + P FF   W++    LE  T  K+  V +++
Sbjct:   157 NVSLRTTKETAHVLQEHYPERLAFAVLYNPPKFFEPFWKVARPFLEPKTRNKVKFVYSDD 216

Query:   196 EMKNFV--KDIGEEVLPEEYGG 215
                  +  ++   E +   +GG
Sbjct:   217 PNTKVIMEENFDMEKMELAFGG 238

GO:0005215 "transporter activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

SGD|S000004372 CSR1 "Phosphatidylinositol transfer protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 176 (67.0 bits), Expect = 8.4e-13, P = 8.4e-13
 Identities = 58/212 (27%), Positives = 99/212 (46%)

Query:    17 DPTLMRFLIARSMDSEKAARMF---VQWQKWRATMVPNG----FIADSE--VPDELEPRK 67
             D T+++F+ AR  +++K   M    + W+K     + NG       ++E  V   LE +K
Sbjct:   109 DATILKFIRARKWNADKTIAMLGHDLYWRKDTINKIINGGERAVYENNETGVIKNLELQK 168

Query:    68 IFLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAI 126
               +QG   D  P+++++ R H  S    Q  +KF + ++++   S     E      T +
Sbjct:   169 ATIQGYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQ---SKLFFKENYPASTTIL 225

Query:   127 LDLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERA 183
              DL   S  N+D   V+ +IT F+   A+YPE L  L I   P  F  +W ++   L+  
Sbjct:   226 FDLNGFSMSNMDYAPVKFLITCFE---AHYPESLGHLLIHKAPWIFNPIWNIIKNWLDPV 282

Query:   184 TLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
                KIV   N +E+  F++    + +P   GG
Sbjct:   283 VASKIVFTKNIDELHKFIQP---QYIPRYLGG 311

GO:0005768 "endosome" evidence=IEA;IDA

GO:2001247 "positive regulation of phosphatidylcholine biosynthetic process" evidence=IGI

GO:0005811 "lipid particle" evidence=IDA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IGI

GO:1901352 "negative regulation of phosphatidylglycerol biosynthetic process" evidence=IGI

GO:0006893 "Golgi to plasma membrane transport" evidence=IGI

GO:0045717 "negative regulation of fatty acid biosynthetic process" evidence=IGI;IMP;IDA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IGI

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0009395 "phospholipid catabolic process" evidence=IEA

GO:0008526 "phosphatidylinositol transporter activity" evidence=IDA

GO:0015914 "phospholipid transport" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0008525 "phosphatidylcholine transporter activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	235
smart00516	158	smart00516, SEC14, Domain in homologues of a S	3e-26
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	5e-25
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	2e-24
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	2e-11

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 99.3 bits (248), Expect = 3e-26
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 7/158 (4%)

Query: 62  ELEPRKIFL---QGLTKDGLPLLVIQVRKHFP-SKDPLQFKKFVVHLLDKTIASSFRGSE 117
           ELE  K ++   +G  KDG P+L+ +  +    S    +  +++V++L+K          
Sbjct: 1   ELELLKAYIPGGRGYDKDGRPVLIERAGRFDLKSVTLEELLRYLVYVLEK--ILQEEKKT 58

Query: 118 VGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVS 177
            G E  T I DL+ +S  N D+  +    + LQ +YPERL K+YI++ P FF  +W+++ 
Sbjct: 59  GGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIK 118

Query: 178 RCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
             L+  T EKI  V N+ + +  ++ I +E LPEE GG
Sbjct: 119 PFLDEKTREKIRFVGNDSKEE-LLEYIDKEQLPEELGG 155

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 95.9 bits (239), Expect = 5e-25
 Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 10/151 (6%)

Query: 69  FLQGLTKDGLPLLVIQVRKHFPSK--DPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAI 126
           +L G  K+G P+L+I+      SK  D  +  +++V+ L+K +       E        I
Sbjct: 12  YLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVE----GFVVI 67

Query: 127 LDLRQISYKNV--DVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERAT 184
           +DL+ +S  ++  D   +    + LQ  YPERL  +YI++ P FF  +W++V   L   T
Sbjct: 68  IDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKT 127

Query: 185 LEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
            +KIV + +++E    +K I +E LPEEYGG
Sbjct: 128 RKKIVFLGSDKE--ELLKYIDKEQLPEEYGG 156

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 94.2 bits (235), Expect = 2e-24
 Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 8/153 (5%)

Query: 67  KIFLQGLTKDGLPLLVIQVRKHFPSK-DPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTA 125
           K +L G  K+G P+L ++  +H P K    +  +F+V +L++ +       E   E +T 
Sbjct: 3   KGYLHGRDKEGRPVLYLRPGRHDPKKSSLEELVRFLVLVLERALLLLP---EGQIEGITV 59

Query: 126 ILDLRQISYKNVDVRG---MITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
           I+D++ +S  N+D      +    + LQ  YPERL K+ I++ P  F  +W+++   L+ 
Sbjct: 60  IIDMKGLSLSNMDKWPISFLKKILKILQDNYPERLGKILIVNAPWIFNVIWKLIKPFLDP 119

Query: 183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
            T EKI        ++  +K I  E LP+EYGG
Sbjct: 120 KTREKIHF-HKNSNLEELLKYIPPEQLPKEYGG 151

Length = 152

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 67  KIFL-QGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTA 125
           K FL  G  K+G P+LV    K  P+ D     + + +LL           E+  +    
Sbjct: 1   KAFLSGGRDKEGRPVLVF-DAKRLPASDLDDLDRLLFYLLSILS------EELKPKGFVV 53

Query: 126 ILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFV-----SVWRMVSRCL 180
           ++D   ++        +   ++ L   +P+ L  +YI+H P  F+     ++ R+ S   
Sbjct: 54  VIDHTGVTRNKPSWSWLKKLYKLLPRAFPKNLKAVYIVH-PSTFLKKFLKTLGRLFSS-- 110

Query: 181 ERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
           ++   +K++ V++  E+    + I    LP E GG
Sbjct: 111 KKLFKKKVIYVSSLSEL---SEYIDPTQLPLELGG 142

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
KOG1470	324	consensus Phosphatidylinositol transfer protein PD	100.0
KOG1471	317	consensus Phosphatidylinositol transfer protein SE	100.0
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	100.0
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.97
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.96
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.77
KOG4406	467	consensus CDC42 Rho GTPase-activating protein [Sig	98.9
PF03765	55	CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr	98.62
PF02845	42	CUE: CUE domain; InterPro: IPR003892 This domain m	89.04
smart00546	43	CUE Domain that may be involved in binding ubiquit	87.25

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=7.6e-47  Score=304.32  Aligned_cols=212  Identities=29%  Similarity=0.500  Sum_probs=198.9

Q ss_pred             CCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccccCCcceecCCCCCCCeEEEEeccccCCCCC
Q 026657           14 KYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKD   93 (235)
Q Consensus        14 ~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~g~~v~~~~~~~~~~~~~   93 (235)
                      .++|.+++|||||+|+|+++|.+++.+++.||+.+++...+..+++..++..|+.|+.|.|++||||+|++++.+.++..
T Consensus        46 ~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~~tGK~yi~G~D~~gRPVl~~~~~~~~qn~~  125 (324)
T KOG1470|consen   46 WCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAELETGKAYILGHDKDGRPVLYLRPRPHRQNTK  125 (324)
T ss_pred             cCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHhhcCcEEEecccCCCCeEEEEecCCCCCCCC
Confidence            68999999999999999999999999999999999886547777799999999999999999999999999999999888


Q ss_pred             hHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCcchHHHHHHHHHHHhccccccceeEEEeCChhHHHH
Q 026657           94 PLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSV  172 (235)
Q Consensus        94 ~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~  172 (235)
                      +.+ +.|+++++||.++..    .+.+.+++++++|++|+|++|++++..+.++.++|+|||+||+..+++|+||+|..+
T Consensus       126 t~~~~~r~~Vy~mE~Ai~~----lp~~qe~~~~L~D~~~fs~sN~d~~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~  201 (324)
T KOG1470|consen  126 TQKELERLLVYTLENAILF----LPPGQEQFVWLFDLTGFSMSNPDIKFLKELLHILQDHYPERLGKALLVNAPWIFQPF  201 (324)
T ss_pred             CHHHHHHHHHHHHHHHHHh----CCCCcceEEEEEecccCcccCCCcHHHHHHHHHHHHhChHHhhhhhhcCChHHHHHH
Confidence            888 999999999999999    778889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCceeccccccccccc
Q 026657          173 WRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQDVTLPQLED  232 (235)
Q Consensus       173 ~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~~~~~~~~~~~~~~  232 (235)
                      |+++|+|+++.|++||+|+.+   .+.++++||+++||..+||+..+..-++.+|+.+-+
T Consensus       202 wkiikpflDp~t~~Kv~F~~~---~~~l~~~~d~~~l~s~~GG~~~~~y~~e~~~~~~~~  258 (324)
T KOG1470|consen  202 WKIIKPFLDPKTASKVKFVEP---KDDLSEYFDESQLPSLFGGKLLFEYTHEEYWPQMKE  258 (324)
T ss_pred             HHHhhhccChhhhceeEEecC---hhHHHhhCCccccchhhCCCcccccCCcchhhhhhh
Confidence            999999999999999999997   467999999999999999999988777777775543

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=4.4e-37  Score=256.66  Aligned_cols=215  Identities=28%  Similarity=0.433  Sum_probs=171.6

Q ss_pred             hhhhhCCCCC--CCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccccC-CcceecCCCCCCCeE
Q 026657            4 SVQKLGSSTG--KYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEP-RKIFLQGLTKDGLPL   80 (235)
Q Consensus         4 ~l~~~~~~~~--~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~~~~~~~~~~~~~~-~~~~~~g~d~~g~~v   80 (235)
                      |+... |+++  ..||..|+|||||++||+++|++++.+++.||..++.+..+...+....+.. .....+|.|+.|+|+
T Consensus        31 ~~~~~-~~l~~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~~~~~~~~~~~~~~~~~~~~~~g~~v  109 (317)
T KOG1471|consen   31 WLLQK-PHLPNKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFEDFEEDDELLKYYPQGLHGVDKEGRPV  109 (317)
T ss_pred             HHhhc-cCCCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhccccchhhhhhccccccccCCCCCEE
Confidence            77777 6665  6999999999999999999999999999999999877543333122222222 235678899999999


Q ss_pred             EEEeccccCCCCC----hHH-HHHHHHHHHHHHHHhhc----cCCCCCCceEEEEEeCCCCCcCCc---chHHHHHHHHH
Q 026657           81 LVIQVRKHFPSKD----PLQ-FKKFVVHLLDKTIASSF----RGSEVGNEKLTAILDLRQISYKNV---DVRGMITGFQF  148 (235)
Q Consensus        81 ~~~~~~~~~~~~~----~~~-~~~~~~~~~E~~~~~~~----~~~~~~~~~~~~i~D~~~~~~~~~---~~~~~k~~~~~  148 (235)
                      ++-+.+..+....    ... +.++.+.-+|.......    +..+.+++|++.|+|++|++++++   .+..++.++.+
T Consensus       110 ~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~G~~~~~~~~~~~~~~~~~~~~  189 (317)
T KOG1471|consen  110 YIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLKGVSLSHLLKPAPTLLKKILKI  189 (317)
T ss_pred             EEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECCCCcchhHHHHHHHHHHHHHHH
Confidence            9999998865431    222 44444444444332222    114568999999999999999875   57889999999


Q ss_pred             HHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCce
Q 026657          149 LQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLV  220 (235)
Q Consensus       149 l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~~  220 (235)
                      ++++||++++++||||+|++|.++|+++||||+++|++||+++++ ++.++|.++|++++||.+|||++.+.
T Consensus       190 ~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~-~~~~~L~k~i~~~~LP~~yGG~~~~~  260 (317)
T KOG1471|consen  190 LQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHS-KDKESLLKYIPPEVLPEEYGGTCGDL  260 (317)
T ss_pred             HHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCC-CchhhhhhhCCHhhCccccCCCcccc
Confidence            999999999999999999999999999999999999999995543 45899999999999999999999965

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=100.00  E-value=8.3e-35  Score=219.59  Aligned_cols=153  Identities=33%  Similarity=0.523  Sum_probs=129.2

Q ss_pred             cccCCcceecCCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCcc--
Q 026657           62 ELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVD--  138 (235)
Q Consensus        62 ~~~~~~~~~~g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~--  138 (235)
                      ..+.+..+++|+|++|+||++++++++++.....+ +.+++++.+|.+++++.+  +.+.+++++|+|++|+++++++  
T Consensus         3 ~~~~~~~~~~g~D~~gr~v~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~--~~~~~~~~~iiD~~g~~~~~~~~~   80 (159)
T PF00650_consen    3 ILKSGPFYLHGRDKDGRPVIYIRLGRFDPKKFSPEDVIRFFVYLLERMLKRMPE--GGQVEGIVVIIDLSGFSLSNFDWW   80 (159)
T ss_dssp             HHTTSCEEEEEE-TTS-EEEEEEGTT--HHTS-HHHHHHHHHHHHHHHHHTHHH--TSHHH-EEEEEE-TT--HHHHHCH
T ss_pred             HHCCeeEEECCCCCCcCEEEEEEcccCCCCcCCHHHHHHHHHHHHHHHHhhhcc--cccceeEEEEEeCCCceEeccccc
Confidence            34567889999999999999999999998888877 999999999999876432  3578999999999999999887  


Q ss_pred             -hHHHHHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCC
Q 026657          139 -VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGR  216 (235)
Q Consensus       139 -~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~  216 (235)
                       .+.++.++++++.+||++++++||+|+|++++++|+++++|+++++++||+++++.++.++|.++||+++||++|||+
T Consensus        81 ~~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~~l~~~i~~~~lP~~~GG~  159 (159)
T PF00650_consen   81 PISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSDWKAKLKEYIDPEQLPVEYGGT  159 (159)
T ss_dssp             HHHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTCHCHHHCCCSTGGGSBGGGTSS
T ss_pred             hhhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcccHHHHHhhCCHhHCchhcCCC
Confidence             899999999999999999999999999999999999999999999999999998767778999999999999999997

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>smart00516 SEC14 Domain in homologues of a S

Probab=99.97  E-value=8.8e-31  Score=197.36  Aligned_cols=144  Identities=33%  Similarity=0.555  Sum_probs=133.5

Q ss_pred             CCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCcchHHHHHHHHHHH
Q 026657           72 GLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQ  150 (235)
Q Consensus        72 g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~k~~~~~l~  150 (235)
                      |.|++|+||+++++++++++..+.+ +.+++++.+|.+....  ..+....++++|+|++|+++++++.+.++.+++.++
T Consensus        14 g~D~~GrpV~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~~~~i~D~~~~~~~~~~~~~lk~~~~~~~   91 (158)
T smart00516       14 GYDKDGRPVLIFRAGRFDLKSVTLEELLRYLVYVLEKILQRE--KKTGGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQ   91 (158)
T ss_pred             CCCCCcCEEEEEeccccccCcCCHHHHHHHHHHHHHHHHHHH--hcCCCeeeEEEEEECCCCCcccccHHHHHHHHHHHH
Confidence            6999999999999999998888888 9999999999888751  135678999999999999999999999999999999


Q ss_pred             hccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcC
Q 026657          151 AYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAK  218 (235)
Q Consensus       151 ~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~  218 (235)
                      .+||++++++||+|+|++++++|+++++|+++++++||+++++ ++.+.|.++||+++||++|||++.
T Consensus        92 ~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~-~~~~~L~~~i~~~~lP~~~GG~~~  158 (158)
T smart00516       92 DHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGN-DSKEELLEYIDPEQLPEELGGTLD  158 (158)
T ss_pred             HHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCC-CCHHHHHhhCCHhhCcHhhCCCCC
Confidence            9999999999999999999999999999999999999999996 446899999999999999999974

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.96  E-value=1.7e-28  Score=183.97  Aligned_cols=144  Identities=32%  Similarity=0.547  Sum_probs=127.4

Q ss_pred             cceecCCCCCCCeEEEEeccccCCC-CChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCc--chHHH
Q 026657           67 KIFLQGLTKDGLPLLVIQVRKHFPS-KDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNV--DVRGM  142 (235)
Q Consensus        67 ~~~~~g~d~~g~~v~~~~~~~~~~~-~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~--~~~~~  142 (235)
                      ..+..|.|++|+||++++++..+.. ..+.+ +.+++++.+|.++..    ......|+++|+|++|++++++  +.+.+
T Consensus        10 ~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~~~~i~D~~~~~~~~~~~~~~~~   85 (157)
T cd00170          10 VGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQE----DDEQVEGFVVIIDLKGLSLSHLLPDPSLL   85 (157)
T ss_pred             ccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhh----hhhcccceEEEEECCCCChhccchhHHHH
Confidence            3344557999999999999865443 33436 999999999999887    3344479999999999999987  88899


Q ss_pred             HHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCC
Q 026657          143 ITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGR  216 (235)
Q Consensus       143 k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~  216 (235)
                      ++++++++.+||++++++||+|+|+++.++|+++++|+++++++||+++++.  .++|.+++++++||.+|||+
T Consensus        86 k~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~--~~~L~~~i~~~~Lp~~~GG~  157 (157)
T cd00170          86 KKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSD--KEELLKYIDKEQLPEEYGGT  157 (157)
T ss_pred             HHHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCC--HHHHHhhCChhhCcHhhCCC
Confidence            9999999999999999999999999999999999999999999999999874  58999999999999999996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.77  E-value=1.6e-19  Score=134.71  Aligned_cols=139  Identities=21%  Similarity=0.396  Sum_probs=97.3

Q ss_pred             ceecCCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCC-cchHHHHHH
Q 026657           68 IFLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKN-VDVRGMITG  145 (235)
Q Consensus        68 ~~~~g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~-~~~~~~k~~  145 (235)
                      ++..|+|++|+||+++...+. ++..+.+ ++.|++..++..         ....++++|+|+++++..+ .++.+++++
T Consensus         4 ~~~gG~d~~g~pV~~~~~~~~-~~~~~~~~ll~yl~~~l~~~---------~~~~~f~vVid~~~~~~~~~~~~~~l~~~   73 (149)
T PF13716_consen    4 FYPGGRDREGRPVVVFIASRL-PSSDDLERLLLYLLSTLSEE---------VVDKPFSVVIDHTGFSRSSEPSLSWLKQL   73 (149)
T ss_dssp             -EEEEEBTTS-EEEEEEGGG--C-TTHHHHHHHHHHHHH-TT---------TTTS-EEEEEE-TT--GGG---HHHHHHT
T ss_pred             EEecccCCCcCEEEEEECCcC-cchhhHHHHHHHHHHhhhHH---------hcCCCEEEEEEcCCCccccCCchHHHHHH
Confidence            356789999999999998777 5555666 666666665211         1224699999999998855 579999999


Q ss_pred             HHHHHhccccccceeEEEeCChhHHHHH-HHhhhccChhh-hcceEEecCchhHHHHHhhCCCCCCCcccCCCcCc
Q 026657          146 FQFLQAYYPERLAKLYILHMPGFFVSVW-RMVSRCLERAT-LEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL  219 (235)
Q Consensus       146 ~~~l~~~yP~~l~~i~ivn~p~~~~~~~-~~vk~~l~~~~-~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~  219 (235)
                      .+.+...|+.+++++||+|++++++... .+.+++.+.+. ..|++++.+   .++|.++||+++||+++||+.++
T Consensus        74 ~~~l~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~s---l~~L~~~i~~~qL~~~lp~~~~~  146 (149)
T PF13716_consen   74 YKLLPRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSS---LSELSKHIDPSQLPESLPGVLQY  146 (149)
T ss_dssp             TTSS-HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESS---TCGGGGTSGGGG------HHH--
T ss_pred             HHHHHHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECC---HHHHHhhCCHHHhcccCCCEEec
Confidence            9999999999999999999999999999 55566778888 899999997   78999999999999999988764

>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton]

Probab=98.90  E-value=1.3e-08  Score=84.79  Aligned_cols=123  Identities=15%  Similarity=0.271  Sum_probs=103.7

Q ss_pred             CCCCCCeEEEEeccccCCCCC-hHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCc-chHHHHHHHHHH
Q 026657           73 LTKDGLPLLVIQVRKHFPSKD-PLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNV-DVRGMITGFQFL  149 (235)
Q Consensus        73 ~d~~g~~v~~~~~~~~~~~~~-~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~-~~~~~k~~~~~l  149 (235)
                      .|+.|+.|+.+.+.++-..+. +-. ++++.++.+|+.+++          -+++++-..|....+- .+.++..-..-+
T Consensus        89 ~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~id~~Ve~----------DYt~vYfh~gl~s~nkp~l~~l~~aYke~  158 (467)
T KOG4406|consen   89 KDKQGRKIIVVYACRLPSSSELDDIRLISYLVYTIDKYVEN----------DYTLVYFHHGLPSDNKPYLQLLFDAYKEL  158 (467)
T ss_pred             ccccCCeeEEEEEecCCchhhhhhHHHHHHHHHHHHHHHhc----------cceeeehhcCCcccccchHHHHHHHHHHH
Confidence            599999999999877765443 333 899999999999987          2888887888777654 477777777777


Q ss_pred             HhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCC
Q 026657          150 QAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEV  208 (235)
Q Consensus       150 ~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~  208 (235)
                      ..+|-..++.+|+|++.|+++.+|++.||++|.+..+||+.++.   .++|.+++.-++
T Consensus       159 Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n~---lseL~~~l~l~r  214 (467)
T KOG4406|consen  159 DRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFNS---LSELFEALKLNR  214 (467)
T ss_pred             HHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEeeh---HHHHHHhhhhhh
Confidence            88899999999999999999999999999999999999999987   789999986443

>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=98.62  E-value=4.1e-08  Score=60.14  Aligned_cols=29  Identities=41%  Similarity=0.507  Sum_probs=25.2

Q ss_pred             CCCChHHHHHHHHhcCCCHHHHHHHHHHH
Q 026657           13 GKYGDPTLMRFLIARSMDSEKAARMFVQW   41 (235)
Q Consensus        13 ~~~~d~~llRfL~~~~~~~~~a~~~l~~~   41 (235)
                      ...+|.+|+|||||++||+++|.++|.++
T Consensus        27 ~~~~d~~llRFLRARkf~v~~A~~mL~~t   55 (55)
T PF03765_consen   27 EDHDDNFLLRFLRARKFDVEKAFKMLKKT   55 (55)
T ss_dssp             SS-SHHHHHHHHHHTTT-HHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCCHHHHHHHHHhC
Confidence            47899999999999999999999999875

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1AUA_A 3Q8G_A 3B7Q_B 3B7Z_A 3B7N_A ....

>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=89.04  E-value=1.4  Score=24.83  Aligned_cols=34  Identities=18%  Similarity=0.200  Sum_probs=27.8

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      .|++.   .|..+...+..-|.++++|++.|...+.+
T Consensus         7 ~L~~m---FP~~~~~~I~~~L~~~~~~ve~ai~~LL~   40 (42)
T PF02845_consen    7 QLQEM---FPDLDREVIEAVLQANNGDVEAAIDALLE   40 (42)
T ss_dssp             HHHHH---SSSS-HHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            45555   47799999999999999999999998764

CUE domains also occur in two proteins of the IL-1 signal transduction pathway, tollip and TAB2.; GO: 0005515 protein binding; PDB: 2EKF_A 1OTR_A 1P3Q_Q 1MN3_A 1WGL_A 2EJS_A 2DAE_A 2DHY_A 2DI0_A.

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=87.25  E-value=1.8  Score=24.48  Aligned_cols=34  Identities=9%  Similarity=0.164  Sum_probs=28.1

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      -|++.   .|..++..+.+.|+++++|++.|...+.+
T Consensus         8 ~L~~m---FP~l~~~~I~~~L~~~~g~ve~~i~~LL~   41 (43)
T smart00546        8 DLKDM---FPNLDEEVIKAVLEANNGNVEATINNLLE   41 (43)
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            34555   47899999999999999999999987753

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	235
3q8g_A	320	Resurrection Of A Functional Phosphatidylinositol T		2e-16
3b74_A	320	Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co		2e-16
1aua_A	296	Phosphatidylinositol Transfer Protein Sec14p From S		3e-11
3hy5_A	316	Crystal Structure Of Cralbp Length = 316		4e-06
1oip_A	278	The Molecular Basis Of Vitamin E Retention: Structu		1e-04
3hx3_A	316	Crystal Structure Of Cralbp Mutant R234w Length = 3		3e-04
1o6u_A	403	The Crystal Structure Of Human Supernatant Protein		5e-04
1r5l_A	262	Crystal Structure Of Human Alpha-tocopherol Transfe		8e-04

>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRK--------- 67
           D TL+RFL AR  D   +  MFV+ ++WR     N  I D E   E E ++         
Sbjct: 61  DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYP 120
Query: 68  IFLQGLTKDGLPLLV-----IQVRKHFPSKDPLQF-----KKFVVHLLDKTIASSFRGSE 117
            +   + KDG PL       I ++K +      Q      K++ +    +  A S R   
Sbjct: 121 QYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGY 180
Query: 118 VGNEKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRM 175
           +     T +LDL+ IS  N   V   I     + Q YYPER+ K YI+H P  F ++++M
Sbjct: 181 LIETSCT-VLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKM 239
Query: 176 VSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQD 224
           V   L+  T+ KI I+ +  + K  +K I  E LP +YGG + L    D
Sbjct: 240 VKPFLDPVTVSKIFILGSSYK-KELLKQIPIENLPVKYGGTSVLHNPND 287

>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRK--------- 67
           D TL+RFL AR  D   +  MFV+ ++WR     N  I D E   E E ++         
Sbjct: 61  DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYP 120
Query: 68  IFLQGLTKDGLPLLV-----IQVRKHFPSKDPLQF-----KKFVVHLLDKTIASSFRGSE 117
            +   + KDG PL       I ++K +      Q      K++ +    +  A S R   
Sbjct: 121 QYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGY 180
Query: 118 VGNEKLTAILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRM 175
           +     T +LDL+ IS  N   V   I     + Q YYPER+ K YI+H P  F ++++M
Sbjct: 181 LIETSCT-VLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKM 239
Query: 176 VSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQD 224
           V   L+  T+ KI I+ +  + K  +K I  E LP +YGG + L    D
Sbjct: 240 VKPFLDPVTVSKIFILGSSYK-KELLKQIPIENLPVKYGGTSVLHNPND 287

>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQ---GL 73
           D TL+RFL AR  D + A  MF   +KWR     +  + D    ++    K + Q     
Sbjct: 52  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 111
Query: 74  TKDGLPLLVIQ---VRKHFPSK---DPLQFKKFVVH---LLDKTIASSFRGSEVGNEKLT 124
            KDG P+   +   V  H  +K   +    K  V     ++   + +  R +    E   
Sbjct: 112 DKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSC 171
Query: 125 AILDLRQISYKNV-DVRGMITGFQFL-QAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
            I+DL+ IS  +   V   +    ++ Q YYPER+ K YI++ P  F + +R+    L+ 
Sbjct: 172 TIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDP 231
Query: 183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL 219
            T+ KI I+ +  + K  +K I  E LP ++GG++++
Sbjct: 232 VTVSKIFILGSSYQ-KELLKQIPAENLPVKFGGKSEV 267

>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 133 SYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVT 192
           S +  D+R M+     LQ  +P R   ++ +H P +F + + +V   L+   LE++ +  
Sbjct: 213 SLRTSDLRKMV---DMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFV-- 267
Query: 193 NEEEMKNFVKDIGEEVLPEEYGG 215
           + +++  F ++I E +LP ++GG
Sbjct: 268 HGDDLSGFYQEIDENILPSDFGG 290

>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 42/220 (19%)
Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKD 76
           D  L+RFL AR  D + A R+   + KWRA           E+  +L PR I   GL K 
Sbjct: 49  DSFLLRFLRARDFDLDLAWRLLKNYYKWRAEC--------PEISADLHPRSII--GLLKA 98
Query: 77  GLPLLVIQVRKHFPSKDPLQFKKFVVHL--LDKTIASSFRGSEVGNEKLTAILDLRQISY 134
           G             S+DP   K  +  +   D  + +++    V    +T+ L ++++  
Sbjct: 99  G-------YHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVS--LITSELIVQEVET 149
Query: 135 KNVDVRGM--ITGFQFLQAY-----------------YPERLAKLYILHMPGFFVSVWRM 175
           +   ++ +  + G+QF  A+                 +P ++  +++++ P  F +V+ M
Sbjct: 150 QRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSM 209
Query: 176 VSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
           +   L     E+I +  N    K  +     ++LP EYGG
Sbjct: 210 IKPFLTEKIKERIHMHGN--NYKQSLLQHFPDILPLEYGG 247

>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 133 SYKNVDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVT 192
           S +  D+R  +     LQ  +P     ++ +H P +F + + +V   L+   LE++ +  
Sbjct: 213 SLRTSDLRKXVDX---LQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFV-- 267
Query: 193 NEEEMKNFVKDIGEEVLPEEYGG 215
           + +++  F ++I E +LP ++GG
Sbjct: 268 HGDDLSGFYQEIDENILPSDFGG 290

>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 22/231 (9%)
Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMD---SEKAARMFVQWQK---------WRATM 48
            R +VQ +  +     D  L+R+L ARS D   SE   R  V+++K         W+   
Sbjct: 19  FRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAXLRKHVEFRKQKDIDNIISWQPPE 78
Query: 49  VPNGFIADSEVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKT 108
           V   +++      +L+   ++   +       L+    K    +D L+ K     LL + 
Sbjct: 79  VIQQYLSGGXCGYDLDGCPVWYDIIGPLDAKGLLFSASK----QDLLRTKXRECELLLQE 134
Query: 109 IASSFRGSEVGNEKLTAILDLRQISYKNVDVRGMITGFQFLQAY---YPERLAKLYILHM 165
            A          E +T I D   +  K++    +    +FL  +   YPE L +L+++  
Sbjct: 135 CAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCXFEENYPETLKRLFVVKA 194
Query: 166 PGFFVSVWRMVSRCLERATLEKI-VIVTNEEEMKNFVKDIGEEVLPEEYGG 215
           P  F   + ++   L   T +KI V+  N +E+   +K I  + +P EYGG
Sbjct: 195 PKLFPVAYNLIKPFLSEDTRKKIXVLGANWKEV--LLKHISPDQVPVEYGG 243

>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLTKD 76
           D  L+RFL AR  D + A R+   + KWRA           E+  +L PR I   GL K 
Sbjct: 33  DSFLLRFLRARDFDLDLAWRLLKNYYKWRAEC--------PEISADLHPRSII--GLLKA 82
Query: 77  GLPLLVIQVRKHFPSKDPLQFKKFVVHLLDKTIASSFRGSEVGNEKL-TAILDLRQISYK 135
           G   ++        S+DP    K +++ +       F   +V    L T+ L ++++  +
Sbjct: 83  GYHGVL-------RSRDPTG-SKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQ 134
Query: 136 NVDVRGM--ITGFQFLQAY-----------------YPERLAKLYILHMPGFFVSVWRMV 176
              ++ +  + G+QF  A+                 +P ++  +++++ P  F +V+  +
Sbjct: 135 RNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSXI 194
Query: 177 SRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
              L     E+I    N    K  +     ++LP EYGG
Sbjct: 195 KPFLTEKIKERIHXHGN--NYKQSLLQHFPDILPLEYGG 231

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	2e-39
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	1e-38
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	5e-34
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	1e-31
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	2e-28
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	5e-06
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	6e-06

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score =  136 bits (345), Expect = 2e-39
 Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 15/213 (7%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPRKIFLQGLT-- 74
           D TL+RFL AR  D + A  MF   +KWR     +  + D    ++    K + Q     
Sbjct: 52  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 111

Query: 75  -KDGLPLLVIQVRKHFPSK-----DPLQFKKFVVHLLDKTIASSFRGSEVGN----EKLT 124
            KDG P+   ++      +        +  K +V   +  +               E   
Sbjct: 112 DKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSC 171

Query: 125 AILDLRQISYKNVD-VRGMITGF-QFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLER 182
            I+DL+ IS  +   V   +       Q YYPER+ K YI++ P  F + +R+    L+ 
Sbjct: 172 TIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDP 231

Query: 183 ATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
            T+ KI I+ +    K  +K I  E LP ++GG
Sbjct: 232 VTVSKIFILGS-SYQKELLKQIPAENLPVKFGG 263

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score =  135 bits (341), Expect = 1e-38
 Identities = 65/219 (29%), Positives = 92/219 (42%), Gaps = 21/219 (9%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEPR---------K 67
           D TL+RFL AR  D   +  MFV+ ++WR     N  I D E   E E +          
Sbjct: 61  DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYP 120

Query: 68  IFLQGLTKDGLPLLVIQVRKHFPSK-----DPLQFKKFVVHLLDKTIASSFRGSEVGN-- 120
            +   + KDG PL   ++      K        Q  + +V   +                
Sbjct: 121 QYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGY 180

Query: 121 --EKLTAILDLRQISYKNVD-VRGMITGF-QFLQAYYPERLAKLYILHMPGFFVSVWRMV 176
             E    +LDL+ IS  N   V   I       Q YYPER+ K YI+H P  F ++++MV
Sbjct: 181 LIETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMV 240

Query: 177 SRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
              L+  T+ KI I+ +    K  +K I  E LP +YGG
Sbjct: 241 KPFLDPVTVSKIFILGS-SYKKELLKQIPIENLPVKYGG 278

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score =  125 bits (314), Expect = 5e-34
 Identities = 45/228 (19%), Positives = 88/228 (38%), Gaps = 16/228 (7%)

Query: 1   MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP 60
            R +VQ +  +     D  L+R+L ARS D +K+  M  +  ++R     +  I+     
Sbjct: 19  FRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPE 78

Query: 61  DELEPRKIFLQGLTKDGLPLLVIQVRKHFPSK-----DPLQFKKFVVHLLDKTI-----A 110
              +     + G   DG P+    +                  +  +   +  +      
Sbjct: 79  VIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQ 138

Query: 111 SSFRGSEVGNEKLTAILDLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPG 167
           ++  G +V  E +T I D   +  K++    V          +  YPE L +L+++  P 
Sbjct: 139 TTKLGRKV--ETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPK 196

Query: 168 FFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG 215
            F   + ++   L   T +KI+++      +  +K I  + +P EYGG
Sbjct: 197 LFPVAYNLIKPFLSEDTRKKIMVL-GANWKEVLLKHISPDQVPVEYGG 243

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score =  116 bits (293), Expect = 1e-31
 Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 14/206 (6%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGF--IADSEVPDELEPRKIF-LQGL 73
               +RF+ AR  +  +A  +   +  +R    P  F  ++   V   +E      L   
Sbjct: 92  SGFFLRFIRARKFNVGRAYELLRGYVNFRLQY-PELFDSLSPEAVRCTIEAGYPGVLSSR 150

Query: 74  TKDGLPLLVIQVRKHFPSK-DPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQI 132
            K G  +++  +      +    +  +    +L+K + +     E        I + +  
Sbjct: 151 DKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENE----ETQINGFCIIENFKGF 206

Query: 133 SYKNV---DVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIV 189
           + +         +      LQ  +P     ++ +H P +F + + +V   L+   LE++ 
Sbjct: 207 TMQQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVF 266

Query: 190 IVTNEEEMKNFVKDIGEEVLPEEYGG 215
           +  +  ++  F ++I E +LP ++GG
Sbjct: 267 VHGD--DLSGFYQEIDENILPSDFGG 290

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score =  107 bits (268), Expect = 2e-28
 Identities = 42/206 (20%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 17  DPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGF--IADSEVPDELEPRKIF-LQGL 73
           D  L+RFL AR  D + A R+   + KWRA   P     +    +   L+      L+  
Sbjct: 33  DSFLLRFLRARDFDLDLAWRLLKNYYKWRAEC-PEISADLHPRSIIGLLKAGYHGVLRSR 91

Query: 74  TKDGLPLLVIQVRKHFPSK-DPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQI 132
              G  +L+ ++    P         +  +   +  +       E     + AI DL   
Sbjct: 92  DPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEV----ETQRNGIKAIFDLEGW 147

Query: 133 SYKN---VDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIV 189
            + +   +           L   +P ++  +++++ P  F +V+ M+   L     E+I 
Sbjct: 148 QFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 207

Query: 190 IVTNEEEMKNFVKDIGEEVLPEEYGG 215
           +  N    K  +     ++LP EYGG
Sbjct: 208 MHGN--NYKQSLLQHFPDILPLEYGG 231

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Length = 256

 Score = 44.9 bits (106), Expect = 6e-06
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 17/156 (10%)

Query: 62  ELEPRKIFLQ-GLTKDGLPLLVIQVRKHFPSK--DPLQFKKFVVHLLDKTIASSFRGSEV 118
            L+   IF Q G +K G P+     R  F +   +       V+  L    A  +     
Sbjct: 6   ALKTLSIFYQAGTSKAGNPIFYYVAR-RFKTGQINGDLLIYHVLLTLKPYYAKPY----- 59

Query: 119 GNEKLTAILDLRQISYKNVDVRG-MITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVS 177
                  ++DL      N      +   F     +  + ++ +YI +   +     +   
Sbjct: 60  -----EIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHE 114

Query: 178 RCLERATL-EKIVIVTNEEEMKNFVKDIGEEVLPEE 212
           R L      +++V +    ++   + +  ++ LP  
Sbjct: 115 RLLTGLKGSKRLVFIDCPGKLAEHI-EHEQQKLPAA 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	235
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	100.0
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	100.0
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	100.0
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	100.0
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	100.0
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	99.61
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.5
1otr_A	49	Protein CUE2; protein-protein complex, cell cycle;	87.01
1wgl_A	59	TOLL-interacting protein; CUE domain, structural g	86.86
2dhy_A	67	CUE domain-containing protein 1; structural genomi	81.88
2di0_A	71	Activating signal cointegrator 1 complex subunit 2	80.27

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=100.00  E-value=5.3e-48  Score=320.41  Aligned_cols=211  Identities=16%  Similarity=0.338  Sum_probs=184.5

Q ss_pred             ChhhhhhhCCCC------------CCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCC-CCCCCCCccccccCCc
Q 026657            1 MRNSVQKLGSST------------GKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPN-GFIADSEVPDELEPRK   67 (235)
Q Consensus         1 lr~~l~~~~~~~------------~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~-~~~~~~~~~~~~~~~~   67 (235)
                      ||+||+++ ||+            .+.||.+|+|||||++||+++|.+++.++++||+.+... +.++.+++...+..|.
T Consensus        65 LR~wi~~~-p~l~~~l~~~~~~~~~~~dD~~LlRFLRarkfdv~kA~~~L~~~l~wR~~~~~~~~~~~~~~i~~~l~~g~  143 (316)
T 3hx3_A           65 LQEMVQAQ-AASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGY  143 (316)
T ss_dssp             HHHHHHHH-HTTTCHHHHHHHHHTTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCGGGTTTCCHHHHHHHHHTTS
T ss_pred             HHHHHHhC-CCccccccccccccCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCchhhcCCCHHHHHHHHHcCC
Confidence            69999999 664            468999999999999999999999999999999996310 1122233344456676


Q ss_pred             c-eecCCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCC---cchHHH
Q 026657           68 I-FLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKN---VDVRGM  142 (235)
Q Consensus        68 ~-~~~g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~---~~~~~~  142 (235)
                      + +++|+|++|+||+++++++++++..+.+ +.+++++++|.++..    .+.++.|+++|+|++|+++++   ++++.+
T Consensus       144 ~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~l~~----~~~~v~g~v~IiD~~g~sl~~~~~~~~~~~  219 (316)
T 3hx3_A          144 PGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLEN----EETQINGFCIIENFKGFTMQQAASLRTSDL  219 (316)
T ss_dssp             SEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHHTTS----HHHHHHCEEEEEECTTCCHHHHHHCCHHHH
T ss_pred             ccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHHHhc----ccCCcceEEEEEECCCCCHHHhccCChHHH
Confidence            4 5789999999999999999999988888 999999999988765    345678999999999999987   477889


Q ss_pred             HHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcC
Q 026657          143 ITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAK  218 (235)
Q Consensus       143 k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~  218 (235)
                      +.++.+++.+||++++++||||+|++|.++|+++|+|++++|++||.|++++  .++|.++||+++||++|||+++
T Consensus       220 k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~--~~~L~~~I~~~~LP~eyGG~~~  293 (316)
T 3hx3_A          220 RKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDD--LSGFYQEIDENILPSDFGGTLP  293 (316)
T ss_dssp             HHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETC--CHHHHHHSCGGGSBGGGTSSBC
T ss_pred             HHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCC--HHHHHhhCCHhhCcHhhCCCCC
Confidence            9999999999999999999999999999999999999999999999999753  4799999999999999999998

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=100.00  E-value=4.4e-47  Score=307.88  Aligned_cols=216  Identities=20%  Similarity=0.308  Sum_probs=184.8

Q ss_pred             ChhhhhhhCC-CCC-CCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCC-CCCCCCCCccccccCCc-ceecCCCCC
Q 026657            1 MRNSVQKLGS-STG-KYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVP-NGFIADSEVPDELEPRK-IFLQGLTKD   76 (235)
Q Consensus         1 lr~~l~~~~~-~~~-~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~-~~~~~~~~~~~~~~~~~-~~~~g~d~~   76 (235)
                      ||+|+++..+ +.+ ..+|.+|+|||||++||+++|.++++++++||+.+.. ...+..+++...+..|. .+++|+|++
T Consensus        15 lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l~~~l~wR~~~~~i~~~~~~~~~~~~~~~g~~~~l~g~D~~   94 (262)
T 1r5l_A           15 LRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPT   94 (262)
T ss_dssp             HHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCHHHHSCCCGGGTHHHHHTTCEEECSSCCTT
T ss_pred             HHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhChHhhhcCChHHHHHHHHcCCccCCCCcCCC
Confidence            6899998853 434 7899999999999999999999999999999999621 01123233444455665 467899999


Q ss_pred             CCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCCc---chHHHHHHHHHHHhc
Q 026657           77 GLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKNV---DVRGMITGFQFLQAY  152 (235)
Q Consensus        77 g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~~---~~~~~k~~~~~l~~~  152 (235)
                      |+||+++++++++++..+.+ +.++.++++|.++..    .+.++.|+++|+|++|++++++   +++.++.++++++.+
T Consensus        95 GrpV~i~~~~~~d~~~~~~~~~~r~~~~~~E~~~~~----~~~~~~g~~~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~  170 (262)
T 1r5l_A           95 GSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQE----VETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDS  170 (262)
T ss_dssp             CCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTS----HHHHHHCEEEEEECTTCCHHHHHHCCHHHHHHHHHHHHTS
T ss_pred             CCEEEEEeccccCcccCCHHHHHHHHHHHHHHHHhC----hhhcccceEEEEECCCCCHHHHhccCHHHHHHHHHHHHhh
Confidence            99999999999999888777 999999999987665    2334679999999999999885   678899999999999


Q ss_pred             cccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCceeccc
Q 026657          153 YPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVAVQD  224 (235)
Q Consensus       153 yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~~~~~~  224 (235)
                      ||++++++||||+|+++.++|+++|||++++|++||+|+++ ++.+.|.++|| ++||++|||++.  ++++
T Consensus       171 yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~-~~~~~L~~~i~-~~LP~~yGG~~~--~~~~  238 (262)
T 1r5l_A          171 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN-NYKQSLLQHFP-DILPLEYGGEEF--SMED  238 (262)
T ss_dssp             SSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCS-SCHHHHHHHST-TTSCGGGTCSSC--CHHH
T ss_pred             CChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCC-CcHHHHHHHhh-hhCcHhhCCCCC--CHHH
Confidence            99999999999999999999999999999999999999985 56789999999 999999999997  5555

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=100.00  E-value=1.8e-46  Score=309.30  Aligned_cols=219  Identities=25%  Similarity=0.381  Sum_probs=184.8

Q ss_pred             ChhhhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCc--cccccC-CcceecCCCCCC
Q 026657            1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEV--PDELEP-RKIFLQGLTKDG   77 (235)
Q Consensus         1 lr~~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~~~~~~~~--~~~~~~-~~~~~~g~d~~g   77 (235)
                      ||+||+++ ++....||.+|+|||||++||+++|.++++++++||+.+++++.+...+.  .+.+.. ...+++|+|++|
T Consensus        37 lr~~l~~~-~~~~~~dd~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~Dk~G  115 (296)
T 1aua_A           37 LRKLLEDA-GFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDG  115 (296)
T ss_dssp             HHHHHHHT-TCCSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTHHHHGGGSCCEEEEECTTS
T ss_pred             HHHHHHhc-CCCCCCchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcHHHHHHhCCceecccCCCC
Confidence            68999998 66668999999999999999999999999999999999876543222111  122222 234688999999


Q ss_pred             CeEEEEeccccCCCC----ChHH-HHHHHHHHHHHHHHhhcc----CCCCCCceEEEEEeCCCCCcCCcc--hHHHHHHH
Q 026657           78 LPLLVIQVRKHFPSK----DPLQ-FKKFVVHLLDKTIASSFR----GSEVGNEKLTAILDLRQISYKNVD--VRGMITGF  146 (235)
Q Consensus        78 ~~v~~~~~~~~~~~~----~~~~-~~~~~~~~~E~~~~~~~~----~~~~~~~~~~~i~D~~~~~~~~~~--~~~~k~~~  146 (235)
                      +||+++++++++++.    .+.+ +.+++++.+|.++...+.    ..+..++++++|+|++|+++++++  .+.++.++
T Consensus       116 rpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s~~~~~~~~~~~k~~~  195 (296)
T 1aua_A          116 RPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREAS  195 (296)
T ss_dssp             CEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCCHHHHHHHHHHHHHHH
Confidence            999999999987643    3566 899999999987764321    124567899999999999999876  67899999


Q ss_pred             HHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCcee
Q 026657          147 QFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLVA  221 (235)
Q Consensus       147 ~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~~~  221 (235)
                      ++++.+||+|++++||||+|++|.++|+++|+||+++|++||+|+++ ++.+.|.++||+++||++|||++++..
T Consensus       196 ~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~-~~~~~L~~~i~~~~LP~~yGG~~~~~~  269 (296)
T 1aua_A          196 YISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS-SYQKELLKQIPAENLPVKFGGKSEVDE  269 (296)
T ss_dssp             HHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS-CCHHHHTTTSCSSSSBGGGTSCBCCCG
T ss_pred             HHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCc-ccHHHHHhhCCHhhCcHHhCCCCCCCC
Confidence            99999999999999999999999999999999999999999999986 567899999999999999999998665

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=100.00  E-value=1.6e-46  Score=311.60  Aligned_cols=218  Identities=29%  Similarity=0.409  Sum_probs=184.1

Q ss_pred             ChhhhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc---------ccccCCcceec
Q 026657            1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVP---------DELEPRKIFLQ   71 (235)
Q Consensus         1 lr~~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~~~~~~~~~---------~~~~~~~~~~~   71 (235)
                      ||+||+++ ++....||.+|+|||||++||+++|.++++++++||+.+++++.+...+..         ...+.+..+++
T Consensus        46 lR~~l~~~-~~~~~~dD~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~~~~~~e~~~~~~~~~~~~~  124 (320)
T 3q8g_A           46 FRSILLEK-NYKERLDDSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYH  124 (320)
T ss_dssp             HHHHHHHT-TCCSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTHHHHHHHHHHHHTTSCEEEE
T ss_pred             HHHHHHhc-CCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCccccccccccccccchhHHHHHHHhCCceec
Confidence            68999999 666689999999999999999999999999999999998765322211111         11233456789


Q ss_pred             CCCCCCCeEEEEeccccCCCC----ChHH-HHHHHHHHHHHHHHhhc----cCCCCCCceEEEEEeCCCCCcCCcc--hH
Q 026657           72 GLTKDGLPLLVIQVRKHFPSK----DPLQ-FKKFVVHLLDKTIASSF----RGSEVGNEKLTAILDLRQISYKNVD--VR  140 (235)
Q Consensus        72 g~d~~g~~v~~~~~~~~~~~~----~~~~-~~~~~~~~~E~~~~~~~----~~~~~~~~~~~~i~D~~~~~~~~~~--~~  140 (235)
                      |+|++||||+++++++++++.    .+.+ +++++++.+|.++...+    +..+..++++++|+|++|++++++.  .+
T Consensus       125 g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~sl~~~~~~~~  204 (320)
T 3q8g_A          125 HVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLS  204 (320)
T ss_dssp             EECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHTHH
T ss_pred             CCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCCCHHHHHHHHH
Confidence            999999999999999988764    2456 88999999998765322    1134457889999999999999875  67


Q ss_pred             HHHHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCce
Q 026657          141 GMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKLV  220 (235)
Q Consensus       141 ~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~~  220 (235)
                      .++.++.+++.+||+|++++||||+|+++.++|+++|+||+++|++||+|+++ ++.++|.++||+++||++|||+++|.
T Consensus       205 ~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~-~~~~~L~~~i~~~~LP~~yGG~~~~~  283 (320)
T 3q8g_A          205 YIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGS-SYKKELLKQIPIENLPVKYGGTSVLH  283 (320)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCT-THHHHHHHHSCGGGSBGGGTSCBCCS
T ss_pred             HHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCC-CcHHHHHhhCChhhCChhhCCCCCCC
Confidence            88999999999999999999999999999999999999999999999999985 56789999999999999999999974

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=100.00  E-value=1.6e-45  Score=315.60  Aligned_cols=217  Identities=21%  Similarity=0.294  Sum_probs=186.3

Q ss_pred             ChhhhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccccC-CcceecCCCCCCCe
Q 026657            1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIADSEVPDELEP-RKIFLQGLTKDGLP   79 (235)
Q Consensus         1 lr~~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~~~~~~~~~~~~~~-~~~~~~g~d~~g~~   79 (235)
                      ||+||++..++++..+|.+|+|||||++||+++|.++|+++++||+.+++++.+. ....+.++. ...+++|.|++|||
T Consensus        19 lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~-~~~~~~~~~~~~~~~~g~Dk~Grp   97 (403)
T 1olm_A           19 FRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIIS-WQPPEVIQQYLSGGMCGYDLDGCP   97 (403)
T ss_dssp             HHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGG-SCCCHHHHHHCCBEEEEECTTSCE
T ss_pred             HHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCcccc-cCCHHHHHHhCCceeeccCCCcCE
Confidence            6899999977778899999999999999999999999999999999987654322 111111221 12346899999999


Q ss_pred             EEEEeccccCCC----CChHH-HHHHHHHHHHHHHHhhcc---CCCCCCceEEEEEeCCCCCcCCc---chHHHHHHHHH
Q 026657           80 LLVIQVRKHFPS----KDPLQ-FKKFVVHLLDKTIASSFR---GSEVGNEKLTAILDLRQISYKNV---DVRGMITGFQF  148 (235)
Q Consensus        80 v~~~~~~~~~~~----~~~~~-~~~~~~~~~E~~~~~~~~---~~~~~~~~~~~i~D~~~~~~~~~---~~~~~k~~~~~  148 (235)
                      |+++++++++++    ..+.+ +.+++++++|.++..+..   ..+.++.++++|+|++|++++++   .++.++.++++
T Consensus        98 V~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~  177 (403)
T 1olm_A           98 VWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCM  177 (403)
T ss_dssp             EEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHH
T ss_pred             EEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHH
Confidence            999999998876    35677 999999999999887531   12345789999999999999987   56789999999


Q ss_pred             HHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCcCc
Q 026657          149 LQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAKL  219 (235)
Q Consensus       149 l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~  219 (235)
                      ++.+||+|++++||||+|++|.++|+++||||+++|++||+|+++ ++.+.|.++||+++||++|||++.+
T Consensus       178 lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~-~~~~~L~~~I~~~~LP~~yGG~~~~  247 (403)
T 1olm_A          178 FEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTMTD  247 (403)
T ss_dssp             HHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGGGTSSBCC
T ss_pred             HHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEECh-hHHHHHHhhcChhhCchhhCCCcCC
Confidence            999999999999999999999999999999999999999999986 7778999999999999999999985

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=99.61  E-value=4.7e-16  Score=124.34  Aligned_cols=139  Identities=13%  Similarity=0.142  Sum_probs=115.2

Q ss_pred             CccccccCCcceecCCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCC
Q 026657           58 EVPDELEPRKIFLQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKN  136 (235)
Q Consensus        58 ~~~~~~~~~~~~~~g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~  136 (235)
                      ++.+.-+.+.+|..|.|++|+||+++.+++......+.| ++.+++..++.+..          ..+.+|+|+++.+..+
T Consensus         3 d~~~i~~~~ify~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~~~~~----------~~y~lV~d~T~~~~~n   72 (256)
T 3pg7_A            3 EFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYA----------KPYEIVVDLTHTGPSN   72 (256)
T ss_dssp             TTTTHHHHTSEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTTT----------SCEEEEEECTTCCGGG
T ss_pred             chhHHHHcCCEEEcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHHHhcC----------CCeEEEEECCCCCccc
Confidence            344444456777889999999999999999988888888 77777777775544          3699999999999865


Q ss_pred             -cchHHHHHHHHHHHhccccccceeEEEeCChhHHHHHHHh-hhccChhhhcceEEecCchhHHHHHhhCCCCCC
Q 026657          137 -VDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMV-SRCLERATLEKIVIVTNEEEMKNFVKDIGEEVL  209 (235)
Q Consensus       137 -~~~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~v-k~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~L  209 (235)
                       .+.++++.+.+++...|..+++++||+||+++++..++.+ +++.+.+..+|+.++++   .++|.++|+.++|
T Consensus        73 ~p~~~wl~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~s---l~eL~~~i~~~~L  144 (256)
T 3pg7_A           73 RFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDC---PGKLAEHIEHEQQ  144 (256)
T ss_dssp             CCCHHHHHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESS---TTGGGGTSCGGGC
T ss_pred             CCcHHHHHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECC---HHHHHhhcCHHHc
Confidence             5688999999999999999999999999999999776654 55666688899999987   6899999977654

>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4

Probab=87.01  E-value=1.2  Score=25.34  Aligned_cols=35  Identities=9%  Similarity=0.110  Sum_probs=29.7

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQW   41 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~   41 (235)
                      .|+++   -|..+...+.+-|.++++|+++|...|.+.
T Consensus        10 ~L~EM---FP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~   44 (49)
T 1otr_A           10 ILMDM---FPAISKSKLQVHLLENNNDLDLTIGLLLKE   44 (49)
T ss_dssp             HHHHH---CSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            45666   467899999999999999999999988764

>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=86.86  E-value=1.2  Score=26.41  Aligned_cols=35  Identities=14%  Similarity=0.198  Sum_probs=29.6

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQW   41 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~   41 (235)
                      .|+++   -|..+...+..-|+++++|++.|...|.+.
T Consensus        15 ~L~em---FP~ld~~~I~~vL~a~~gdvd~aI~~LL~m   49 (59)
T 1wgl_A           15 AIQDM---FPNMDQEVIRSVLEAQRGNKDAAINSLLQM   49 (59)
T ss_dssp             HHHHH---CSSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence            45555   478999999999999999999999988653

>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.88  E-value=3  Score=25.42  Aligned_cols=35  Identities=11%  Similarity=0.045  Sum_probs=29.7

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQW   41 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~   41 (235)
                      .|+++   -|..+...|..-|+++++|++.|.+.|.+.
T Consensus        24 ~L~~M---FP~lD~~vI~~vL~a~~G~vd~aId~LL~m   58 (67)
T 2dhy_A           24 DFKTM---FPNMDYDIIECVLRANSGAVDATIDQLLQM   58 (67)
T ss_dssp             HHHHH---CSSSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            35555   478999999999999999999999988765

>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=80.27  E-value=1  Score=27.85  Aligned_cols=29  Identities=14%  Similarity=0.189  Sum_probs=26.7

Q ss_pred             CCCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657           12 TGKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus        12 ~~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      .|++++.++.+.|..+++|+|++...+-+
T Consensus        24 fPdLG~gfi~~~L~~y~~nvE~vin~LLE   52 (71)
T 2di0_A           24 LPDLGEGFILACLEYYHYDPEQVINNILE   52 (71)
T ss_dssp             CCSSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred             cccCCHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            57899999999999999999999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	235
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	3e-21
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	1e-18
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	3e-17
d1olma1	75	a.5.3.1 (A:1-75) Supernatant protein factor (SPF),	2e-08
d1auaa1	93	a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl	1e-06
d1r5la1	66	a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei	4e-04

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 3e-21
 Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 10/153 (6%)

Query: 69  FLQGLTKDGLPLLVIQVRKHFPSK-DPLQFKKFVVHLLDKTIASSFRGSEVGNEKLTAIL 127
            L+     G  +L+ ++    P         +  +   +  +       E     + AI 
Sbjct: 13  VLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEV----ETQRNGIKAIF 68

Query: 128 DLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERAT 184
           DL    + +               L   +P ++  +++++ P  F +V+ M+   L    
Sbjct: 69  DLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKI 128

Query: 185 LEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRA 217
            E+I +  N    K  +     ++LP EYGG  
Sbjct: 129 KERIHMHGN--NYKQSLLQHFPDILPLEYGGEE 159

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.0 bits (194), Expect = 1e-18
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)

Query: 69  FLQGLTKDGLPLLVIQVRKHFPSK-----DPLQFKKFVVHLLDKTIA----SSFRGSEVG 119
           +     KDG P+   ++      +        +  K +V   +  +     +  R +   
Sbjct: 14  YYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHL 73

Query: 120 NEKLTAILDLRQISYKNVD-VRGMITGF-QFLQAYYPERLAKLYILHMPGFFVSVWRMVS 177
            E    I+DL+ IS  +   V   +       Q YYPER+ K YI++ P  F + +R+  
Sbjct: 74  VETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFK 133

Query: 178 RCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAK 218
             L+  T+ KI I+ +    K  +K I  E LP ++GG+++
Sbjct: 134 PFLDPVTVSKIFILGSSY-QKELLKQIPAENLPVKFGGKSE 173

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 3e-17
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 12/160 (7%)

Query: 70  LQGLTKDGLPLLVIQVRKHFPSK-----DPLQFKKFVVHLLDKTIASSFRGSEVGN---E 121
           + G   DG P+    +                  +  +   +  +      +       E
Sbjct: 13  MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVE 72

Query: 122 KLTAILDLRQISYKNVD---VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSR 178
            +T I D   +  K++    V          +  YPE L +L+++  P  F   + ++  
Sbjct: 73  TITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKP 132

Query: 179 CLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRAK 218
            L   T +KI+++      +  +K I  + +P EYGG   
Sbjct: 133 FLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTMT 171

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (114), Expect = 2e-08
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 1  MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATM 48
           R +VQ +  +     D  L+R+L ARS D +K+  M  +  ++R   
Sbjct: 19 FRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQK 66

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (102), Expect = 1e-06
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 1  MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNGFIAD 56
          +R  ++  G    +  D TL+RFL AR  D + A  MF   +KWR     +  + D
Sbjct: 37 LRKLLEDAGF-IERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQD 91

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 1  MRNSVQKLGSST--GKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRAT 47
          +R   ++ G         D  L+RFL AR  D + A R+   + KWRA 
Sbjct: 7  LRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAE 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	235
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	100.0
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	100.0
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	100.0
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	99.35
d1r5la1	66	Alpha-tocopherol transfer protein {Human (Homo sap	99.33
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	99.23
d2daha1	41	Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}	90.02
d1wgla_	59	Toll-interacting protein {Human (Homo sapiens) [Ta	86.88
d2dnaa1	50	Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus	85.44
d2bwba1	44	DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	84.13
d2di0a1	63	Activating signal cointegrator 1 complex subunit 2	82.93

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-35  Score=224.33  Aligned_cols=152  Identities=19%  Similarity=0.279  Sum_probs=134.7

Q ss_pred             eecCCCCCCCeEEEEeccccCCCC----ChHH-HHHHHHHHHHHHHHhhcc---CCCCCCceEEEEEeCCCCCcCCc---
Q 026657           69 FLQGLTKDGLPLLVIQVRKHFPSK----DPLQ-FKKFVVHLLDKTIASSFR---GSEVGNEKLTAILDLRQISYKNV---  137 (235)
Q Consensus        69 ~~~g~d~~g~~v~~~~~~~~~~~~----~~~~-~~~~~~~~~E~~~~~~~~---~~~~~~~~~~~i~D~~~~~~~~~---  137 (235)
                      .++|.|++||||+++++++++++.    .+.+ +.++.++.+|..++.+.+   +.+.+++++++|+|++|++++++   
T Consensus        12 ~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~~~~~~~   91 (199)
T d1olma3          12 GMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKP   91 (199)
T ss_dssp             EEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHH
T ss_pred             ccccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCchhhhccc
Confidence            378999999999999999998652    4566 999999999998876542   23456789999999999999887   


Q ss_pred             chHHHHHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCCc
Q 026657          138 DVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGRA  217 (235)
Q Consensus       138 ~~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~~  217 (235)
                      .++.++.+++++|++||++++++||||+|++++++|+++|+|++++|++||+|+++ ++.+.|.++|++++||++|||++
T Consensus        92 ~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~-~~~~~L~~~i~~~~lP~~yGGt~  170 (199)
T d1olma3          92 AVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTM  170 (199)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGGGTSSB
T ss_pred             cHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC-CCHHHHHHhCCHhhCCHHhCCCC
Confidence            47889999999999999999999999999999999999999999999999999985 56789999999999999999999


Q ss_pred             Ccee
Q 026657          218 KLVA  221 (235)
Q Consensus       218 ~~~~  221 (235)
                      ++..
T Consensus       171 ~~~~  174 (199)
T d1olma3         171 TDPD  174 (199)
T ss_dssp             CCTT
T ss_pred             CCCC
Confidence            7643

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-35  Score=222.09  Aligned_cols=156  Identities=18%  Similarity=0.245  Sum_probs=138.4

Q ss_pred             ccccCCcce-ecCCCCCCCeEEEEeccccCCCCChHH-HHHHHHHHHHHHHHhhccCCCCCCceEEEEEeCCCCCcCC--
Q 026657           61 DELEPRKIF-LQGLTKDGLPLLVIQVRKHFPSKDPLQ-FKKFVVHLLDKTIASSFRGSEVGNEKLTAILDLRQISYKN--  136 (235)
Q Consensus        61 ~~~~~~~~~-~~g~d~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~~~~~i~D~~~~~~~~--  136 (235)
                      ..++.|.+. ++|+|++|+||+++++++++++..+.+ +.+++++.+|.++.+    ...+.+|+++|+|++|+++++  
T Consensus         4 ~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~~----~~~~~~g~~~I~D~~g~s~~~~~   79 (185)
T d1r5la2           4 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQE----VETQRNGIKAIFDLEGWQFSHAF   79 (185)
T ss_dssp             HHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTS----HHHHHHCEEEEEECTTCCHHHHH
T ss_pred             HHHHcCCceecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHhc----cccCCceEEEEEECCCCCHHHhh
Confidence            445667665 689999999999999999999998888 999999999987665    345678999999999999987  


Q ss_pred             -cchHHHHHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCC
Q 026657          137 -VDVRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGG  215 (235)
Q Consensus       137 -~~~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG  215 (235)
                       .+++.+++++++++++||+|++++||||+|+++.++|+++|+|+++++++||++++++  .+++.+++++++||++|||
T Consensus        80 ~~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~--~~~~~~~~~~~~LP~~~GG  157 (185)
T d1r5la2          80 QITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN--YKQSLLQHFPDILPLEYGG  157 (185)
T ss_dssp             HCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS--CHHHHHHHSTTTSCGGGTC
T ss_pred             hccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccc--hHHHHhhcCHHhCCHhcCC
Confidence             4789999999999999999999999999999999999999999999999999999753  3567777889999999999


Q ss_pred             CcCceeccc
Q 026657          216 RAKLVAVQD  224 (235)
Q Consensus       216 ~~~~~~~~~  224 (235)
                      ++.  +++|
T Consensus       158 ~~~--~~~~  164 (185)
T d1r5la2         158 EEF--SMED  164 (185)
T ss_dssp             SSC--CHHH
T ss_pred             CCC--ChHH
Confidence            997  5555

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.1e-34  Score=219.64  Aligned_cols=153  Identities=25%  Similarity=0.375  Sum_probs=134.2

Q ss_pred             ceecCCCCCCCeEEEEeccccCCC----CChHH-HHHHHHHHHHHHHHhhc----cCCCCCCceEEEEEeCCCCCcCCcc
Q 026657           68 IFLQGLTKDGLPLLVIQVRKHFPS----KDPLQ-FKKFVVHLLDKTIASSF----RGSEVGNEKLTAILDLRQISYKNVD  138 (235)
Q Consensus        68 ~~~~g~d~~g~~v~~~~~~~~~~~----~~~~~-~~~~~~~~~E~~~~~~~----~~~~~~~~~~~~i~D~~~~~~~~~~  138 (235)
                      .+++|+|++|+||++++++++++.    ..+.+ +.++.++.+|.+++..+    +..+..++++++|+|++|++++++.
T Consensus        13 ~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s~~~~~   92 (203)
T d1auaa2          13 QYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAY   92 (203)
T ss_dssp             CEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHH
T ss_pred             CcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCCChHHhh
Confidence            367899999999999999998764    34666 99999999998876543    1234567899999999999998874


Q ss_pred             --hHHHHHHHHHHHhccccccceeEEEeCChhHHHHHHHhhhccChhhhcceEEecCchhHHHHHhhCCCCCCCcccCCC
Q 026657          139 --VRGMITGFQFLQAYYPERLAKLYILHMPGFFVSVWRMVSRCLERATLEKIVIVTNEEEMKNFVKDIGEEVLPEEYGGR  216 (235)
Q Consensus       139 --~~~~k~~~~~l~~~yP~~l~~i~ivn~p~~~~~~~~~vk~~l~~~~~~ki~~~~~~~~~~~L~~~i~~~~LP~~~GG~  216 (235)
                        .+.++.++++++.+||++++++||||+|++++++|+++|+|++++|++||+++++ ++.+.|.++||+++||++|||+
T Consensus        93 ~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~-~~~~~L~~~id~~~LP~~~GG~  171 (203)
T d1auaa2          93 SVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS-SYQKELLKQIPAENLPVKFGGK  171 (203)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS-CCHHHHTTTSCSSSSBGGGTSC
T ss_pred             hHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCC-CCHHHHHhhCCHhhChHHhCCC
Confidence              5778999999999999999999999999999999999999999999999999985 5578999999999999999999


Q ss_pred             cCcee
Q 026657          217 AKLVA  221 (235)
Q Consensus       217 ~~~~~  221 (235)
                      ++|..
T Consensus       172 ~~~~~  176 (203)
T d1auaa2         172 SEVDE  176 (203)
T ss_dssp             BCCCG
T ss_pred             CcCCC
Confidence            98753

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.5e-13  Score=85.70  Aligned_cols=52  Identities=27%  Similarity=0.333  Sum_probs=46.6

Q ss_pred             ChhhhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCC
Q 026657            1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPNG   52 (235)
Q Consensus         1 lr~~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~~   52 (235)
                      ||+++.+..+..+..||.+|+|||||++||+++|.+++.++++||+.++++.
T Consensus        19 lr~~l~~~~~~~~~~dd~~LlRFLrAr~fdv~kA~~ml~~~l~WR~~~~vD~   70 (75)
T d1olma1          19 FRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDN   70 (75)
T ss_dssp             HHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGG
T ss_pred             HHHHHHhhcccCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHcCchh
Confidence            5788888755556899999999999999999999999999999999998854

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=9.7e-13  Score=80.97  Aligned_cols=49  Identities=35%  Similarity=0.596  Sum_probs=43.9

Q ss_pred             ChhhhhhhC-CCCC-CCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCC
Q 026657            1 MRNSVQKLG-SSTG-KYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVP   50 (235)
Q Consensus         1 lr~~l~~~~-~~~~-~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~   50 (235)
                      ||+||++.. |+++ ..+|.+|+|||||++||+++|.++|.+|++||..+ |
T Consensus         7 lR~~l~~~~~p~lp~~~dD~~LlrFLRarkf~~~ka~~~l~~y~~~R~~~-p   57 (66)
T d1r5la1           7 LRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAEC-P   57 (66)
T ss_dssp             HHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHC-H
T ss_pred             HHHHHHHcCCCcCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHC-H
Confidence            689997774 6777 58999999999999999999999999999999995 5

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=4.9e-12  Score=83.25  Aligned_cols=50  Identities=32%  Similarity=0.544  Sum_probs=45.4

Q ss_pred             ChhhhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCC
Q 026657            1 MRNSVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQWQKWRATMVPN   51 (235)
Q Consensus         1 lr~~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~~~~wR~~~~~~   51 (235)
                      ||++|.+. +....++|.+|+|||||++||+++|.+++.++++||+.++++
T Consensus        37 lr~~l~~~-~~~~~~DD~~llRfLrAr~fd~~~a~~ml~~~l~wR~~~~~d   86 (93)
T d1auaa1          37 LRKLLEDA-GFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTD   86 (93)
T ss_dssp             HHHHHHHT-TCCSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGG
T ss_pred             HHHHHHHC-CCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCcc
Confidence            57889887 566689999999999999999999999999999999998764

>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.02  E-value=0.38  Score=25.00  Aligned_cols=28  Identities=25%  Similarity=0.237  Sum_probs=25.3

Q ss_pred             CCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657           13 GKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus        13 ~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      +..|+.--++-|.+.++|+++|.+.|.+
T Consensus        13 GF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~   40 (41)
T d2daha1          13 GFLNREANLQALIATGGDVDAAVEKLRQ   40 (41)
T ss_dssp             TCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            5788888899999999999999999875

>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Toll-interacting protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.88  E-value=0.6  Score=26.28  Aligned_cols=34  Identities=15%  Similarity=0.214  Sum_probs=29.3

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      .|+++   -|..++..+..-|++++++++.|...|.+
T Consensus        15 ~LkeM---FP~~D~~vI~~VL~a~~G~vd~aid~LL~   48 (59)
T d1wgla_          15 AIQDM---FPNMDQEVIRSVLEAQRGNKDAAINSLLQ   48 (59)
T ss_dssp             HHHHH---CSSSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred             HHHHH---CCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            45566   47899999999999999999999998865

>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-like protein Ubqlnl
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.44  E-value=0.99  Score=24.41  Aligned_cols=29  Identities=21%  Similarity=0.094  Sum_probs=25.5

Q ss_pred             CCCChHHHHHHHHhcCCCHHHHHHHHHHH
Q 026657           13 GKYGDPTLMRFLIARSMDSEKAARMFVQW   41 (235)
Q Consensus        13 ~~~~d~~llRfL~~~~~~~~~a~~~l~~~   41 (235)
                      +..|+..-++-|.++++|++.|.+.+.+.
T Consensus        19 GF~d~~~Ni~AL~~t~GdV~~Aie~Ll~~   47 (50)
T d2dnaa1          19 GFVNYNANLQALIATDGDTNAAIYKLKSS   47 (50)
T ss_dssp             TCCCHHHHHHHHHHTTSCHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            56788888999999999999999998753

>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DSK2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.13  E-value=0.99  Score=23.71  Aligned_cols=27  Identities=11%  Similarity=0.001  Sum_probs=24.2

Q ss_pred             CCCChHHHHHHHHhcCCCHHHHHHHHH
Q 026657           13 GKYGDPTLMRFLIARSMDSEKAARMFV   39 (235)
Q Consensus        13 ~~~~d~~llRfL~~~~~~~~~a~~~l~   39 (235)
                      +..|+..-++-|+++++|++.|.+.+.
T Consensus        16 GF~d~~~Ni~AL~~t~GdV~~Aie~Ll   42 (44)
T d2bwba1          16 GFFDFDRNVAALRRSGGSVQGALDSLL   42 (44)
T ss_dssp             TCCCHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHHHHHHh
Confidence            578888899999999999999999874

>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Activating signal cointegrator 1 complex subunit 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.93  E-value=1.1  Score=25.51  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=29.1

Q ss_pred             hhhhhCCCCCCCChHHHHHHHHhcCCCHHHHHHHHHH
Q 026657            4 SVQKLGSSTGKYGDPTLMRFLIARSMDSEKAARMFVQ   40 (235)
Q Consensus         4 ~l~~~~~~~~~~~d~~llRfL~~~~~~~~~a~~~l~~   40 (235)
                      .+++.   .|+..+.++.+.|..+++|+|++...+.+
T Consensus        12 qV~Dl---~PdLG~GFi~~~L~~Y~~n~E~vI~~lLe   45 (63)
T d2di0a1          12 QVKDL---LPDLGEGFILACLEYYHYDPEQVINNILE   45 (63)
T ss_dssp             HHHHH---CCSSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred             HHHHH---cCCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            45555   46789999999999999999999998876