Citrus Sinensis ID: 026678

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
MQEQSQWIRESLTSFPQPPNRTNHNAFYGPIDDLFNAVKEKKVLLEEESSIGSLDLGASSCTSNEDAHRWKFYEEDIATLRGKTCKSVKAGVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGECVLPGNFIIMIWCI
cHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEEEECccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccccccccccccccEEEEcccccEEEEEcccccccccCEEEcccccEEEEccccccccccccccccccccccccc
*QEQSQWIRESLTSFPQPPNRTNHNAFYGPIDDLFNAVKEKKVLLE**************CTSNEDAHRWKFYEEDIATLRGKTCKSVKAGVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGECVLPGNFIIMIWC*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQEQSQWIRESLTSFPQPPNRTNHNAFYGPIDDLFNAVKEKKVLLEEESSIGSLDLGASSCTSNEDAHRWKFYEEDIATLRGKTCKSVKAGVLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGECVLPGNFIIMIWCI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alpha-ketoglutarate-dependent dioxygenase alkB Putative dioxygenase that may repair alkylated DNA or RNA by oxidative demethylation. Requires molecular oxygen, alpha-ketoglutarate and iron.probableQ9SA98

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I3Q, chain A
Confidence level:very confident
Coverage over the Query: 86-226
View the alignment between query and template
View the model in PyMOL