Citrus Sinensis ID: 026767

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
MLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSSAISNLDHVIIKLARKLPTGDVSALKKANAVQDEEPLDENDLT
ccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHccccccccccccccccccccccccccccc
**SSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSSAISNLDHVIIKLARKLP*************************
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MLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPASDALAKAARALEDAVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFLRSDQNRCATKLISAYTEGDVEEIKRVAQSSAISNLDHVIIKLARKLPTGDVSALKKANAVQDEEPLDENDLT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Gamma-soluble NSF attachment protein Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it.probableQ9SPE5

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2IFU, chain A
Confidence level:very confident
Coverage over the Query: 2-210
View the alignment between query and template
View the model in PyMOL