Citrus Sinensis ID: 026769


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
ccccccccccccccEEEEccccccccccHHcHHHHHHHHcccccEEccccccccccccHHHHHHHccccccccHHHHHHHHHHHcEEEEccccccccccccHHHHHcccccHHHHcccccccccccccEEEEEEccccHHHHHHHHHHccccEEEEEcccccccccccccEEEEEEEccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEccc
cHHHccccccccccEEccEcccccccEccHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHcEcccccHHHHHHHHHHHcEEEEEHHHHcHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEEccccEEEEccccEEEEEcccEEEEEEEcHHHcccccccHHHHccccHHHHHHHHHHHHcccccccccEEEEEEc
MIKYATKveglgdavdivgtggdgantvnISTGASILAAACGAKvakqgsrssssacgsaDVLEALGVvidldpegvrrcvdeagigfmmstkyhpamkfvrpvrkklkVKTVFNIlgpmlnpacvpFAVVGVYNENLVLKMANALQRFGLKRALVVHsegldemsplgpgliLDVTQEKIerfsfdpldygiprctleslqgggpaynAEVLRRVLSGERGAIADALVSFLL
mikyatkveglgdaVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGvvidldpegVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEgldemsplgpGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQgsrssssacgsaDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
*****TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKV************GSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSF**
*****TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAA*****************GSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
*****TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
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iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALVSFLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query233 2.2.26 [Sep-21-2011]
Q02166444 Anthranilate phosphoribos yes no 0.974 0.511 0.828 1e-106
Q254S7343 Anthranilate phosphoribos yes no 0.974 0.661 0.491 9e-59
Q822W6343 Anthranilate phosphoribos yes no 0.974 0.661 0.5 1e-57
B9LEV9339 Anthranilate phosphoribos yes no 0.944 0.648 0.518 1e-55
A9WCH7339 Anthranilate phosphoribos yes no 0.944 0.648 0.518 1e-55
B9M5M2350 Anthranilate phosphoribos yes no 0.922 0.614 0.486 4e-55
B8G5C5340 Anthranilate phosphoribos yes no 0.944 0.647 0.509 6e-55
B3E5V8349 Anthranilate phosphoribos yes no 0.892 0.595 0.497 3e-54
Q1AU89342 Anthranilate phosphoribos yes no 0.922 0.628 0.488 2e-52
Q47YC2365 Anthranilate phosphoribos yes no 0.875 0.558 0.490 2e-52
>sp|Q02166|TRPD_ARATH Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  385 bits (989), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/227 (82%), Positives = 208/227 (91%)

Query: 1   MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSA 60
           M+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQG+RSSSSACGSA
Sbjct: 166 MMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSA 225

Query: 61  DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPM 120
           DVLEALGVV+DL PEG++RCV+E GIGFMMS  YHPAMK V PVRKKLK+KTVFNILGPM
Sbjct: 226 DVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPM 285

Query: 121 LNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEK 180
           LNPA V +AVVGVY+++LV+KMA ALQRFG+KRALVVHS GLDEMSPLG GL+ DVT EK
Sbjct: 286 LNPARVSYAVVGVYHKDLVVKMAKALQRFGMKRALVVHSCGLDEMSPLGGGLVYDVTPEK 345

Query: 181 IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADA 227
           IE FSFDPLD+GIPRCTLE L+GGGP YNA+VLRRVLSGE GAIAD+
Sbjct: 346 IEEFSFDPLDFGIPRCTLEDLRGGGPDYNADVLRRVLSGESGAIADS 392





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 8
>sp|Q254S7|TRPD_CHLFF Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|Q822W6|TRPD_CHLCV Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae (strain GPIC) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|B9LEV9|TRPD_CHLSY Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|A9WCH7|TRPD_CHLAA Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|B9M5M2|TRPD_GEOSF Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|B8G5C5|TRPD_CHLAD Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|B3E5V8|TRPD_GEOLS Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|Q1AU89|TRPD_RUBXD Anthranilate phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=trpD PE=3 SV=1 Back     alignment and function description
>sp|Q47YC2|TRPD_COLP3 Anthranilate phosphoribosyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=trpD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
325516268 365 anthranilate phosphoribosyltransferase [ 0.978 0.624 0.846 1e-109
255540627 425 anthranilate phosphoribosyltransferase, 0.961 0.527 0.861 1e-108
225456993 394 PREDICTED: anthranilate phosphoribosyltr 0.982 0.581 0.842 1e-108
224119386 334 predicted protein [Populus trichocarpa] 0.952 0.664 0.842 1e-106
15238711 444 anthranilate phosphoribosyltransferase [ 0.974 0.511 0.828 1e-105
297807819 444 hypothetical protein ARALYDRAFT_909800 [ 0.974 0.511 0.828 1e-104
1389768 441 phosphoribosylanthranilate transferase [ 0.974 0.514 0.823 1e-104
449469549 412 PREDICTED: anthranilate phosphoribosyltr 0.952 0.538 0.824 1e-101
356508683 399 PREDICTED: anthranilate phosphoribosyltr 0.961 0.561 0.825 4e-99
357461927 394 Anthranilate phosphoribosyltransferase [ 0.982 0.581 0.812 3e-97
>gi|325516268|gb|ADZ24712.1| anthranilate phosphoribosyltransferase [Solanum pennellii] Back     alignment and taxonomy information
 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/228 (84%), Positives = 212/228 (92%)

Query: 1   MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSA 60
           MIK+  +VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQG+RSSSSACGSA
Sbjct: 120 MIKHCRQVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGNRSSSSACGSA 179

Query: 61  DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPM 120
           DVLE LGV I+LDPEGV+ CV++AGIGFMMS  YHPAMK VRP+RKKLKVKTVFNILGPM
Sbjct: 180 DVLEELGVAIELDPEGVKECVNKAGIGFMMSPIYHPAMKIVRPIRKKLKVKTVFNILGPM 239

Query: 121 LNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEK 180
           LNPA VPFAVVGVY E+LV KMA ALQRFG+KRALVVHSEGLDEMSPLGPGL+LDVT + 
Sbjct: 240 LNPARVPFAVVGVYKEDLVHKMAKALQRFGMKRALVVHSEGLDEMSPLGPGLVLDVTPDN 299

Query: 181 IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADAL 228
           I++FSFDPLD+GIPRCTLESL+GGGP YNAE+LRRVLSGE+G+IADA 
Sbjct: 300 IKKFSFDPLDFGIPRCTLESLRGGGPEYNAEMLRRVLSGEKGSIADAF 347




Source: Solanum pennellii

Species: Solanum pennellii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540627|ref|XP_002511378.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] gi|223550493|gb|EEF51980.1| anthranilate phosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225456993|ref|XP_002282228.1| PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Vitis vinifera] gi|297733759|emb|CBI15006.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224119386|ref|XP_002318059.1| predicted protein [Populus trichocarpa] gi|222858732|gb|EEE96279.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15238711|ref|NP_197300.1| anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|401213|sp|Q02166.1|TRPD_ARATH RecName: Full=Anthranilate phosphoribosyltransferase, chloroplastic; Flags: Precursor gi|166792|gb|AAA32835.1| phosphoribosylanthranilate transferase [Arabidopsis thaliana] gi|9757891|dbj|BAB08398.1| anthranilate phosphoribosyltransferase, chloroplast precursor [Arabidopsis thaliana] gi|15450852|gb|AAK96697.1| anthranilate phosphoribosyltransferase, chloroplast precursor [Arabidopsis thaliana] gi|20259900|gb|AAM13297.1| anthranilate phosphoribosyltransferase, chloroplast precursor [Arabidopsis thaliana] gi|332005110|gb|AED92493.1| anthranilate phosphoribosyltransferase [Arabidopsis thaliana] gi|445600|prf||1909347A phosphoribosylanthranilate transferase Back     alignment and taxonomy information
>gi|297807819|ref|XP_002871793.1| hypothetical protein ARALYDRAFT_909800 [Arabidopsis lyrata subsp. lyrata] gi|297317630|gb|EFH48052.1| hypothetical protein ARALYDRAFT_909800 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|1389768|gb|AAB02913.1| phosphoribosylanthranilate transferase [Arabidopsis thaliana] gi|28394222|gb|AAO42464.1| phosphorybosyl anthranilate transferase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449469549|ref|XP_004152482.1| PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356508683|ref|XP_003523084.1| PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357461927|ref|XP_003601245.1| Anthranilate phosphoribosyltransferase [Medicago truncatula] gi|355490293|gb|AES71496.1| Anthranilate phosphoribosyltransferase [Medicago truncatula] gi|388505804|gb|AFK40968.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
TAIR|locus:2161528444 TRP1 "tryptophan biosynthesis 0.982 0.515 0.777 4.5e-91
TIGR_CMR|CHY_1585340 CHY_1585 "anthranilate phospho 0.948 0.65 0.457 9.8e-48
TIGR_CMR|CPS_3524365 CPS_3524 "anthranilate phospho 0.875 0.558 0.451 4.4e-45
UNIPROTKB|P00904531 trpD "anthranilate synthase co 0.922 0.404 0.409 1.3e-43
TIGR_CMR|DET_1483341 DET_1483 "anthranilate phospho 0.965 0.659 0.412 5.7e-43
UNIPROTKB|Q9KST4332 trpD "Anthranilate phosphoribo 0.935 0.656 0.380 3.2e-42
TIGR_CMR|VC_1172332 VC_1172 "anthranilate phosphor 0.935 0.656 0.380 3.2e-42
TIGR_CMR|SO_3021347 SO_3021 "anthranilate phosphor 0.879 0.590 0.404 1.1e-41
TIGR_CMR|GSU_2381350 GSU_2381 "anthranilate phospho 0.922 0.614 0.402 5.3e-40
UNIPROTKB|P66992370 trpD "Anthranilate phosphoribo 0.918 0.578 0.422 2.3e-39
TAIR|locus:2161528 TRP1 "tryptophan biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
 Identities = 178/229 (77%), Positives = 198/229 (86%)

Query:     1 MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXX 60
             M+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            
Sbjct:   166 MMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSA 225

Query:    61 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPM 120
             DVLEALGVV+DL PEG++RCV+E GIGFMMS  YHPAMK V PVRKKLK+KTVFNILGPM
Sbjct:   226 DVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPM 285

Query:   121 LNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEK 180
             LNPA V +AVVGVY+++LV+KMA ALQRFG+KRALVVHS GLDEMSPLG GL+ DVT EK
Sbjct:   286 LNPARVSYAVVGVYHKDLVVKMAKALQRFGMKRALVVHSCGLDEMSPLGGGLVYDVTPEK 345

Query:   181 IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV 229
             IE FSFDPLD+GIPRCTLE L+GGGP YNA+VLRRVLSGE GAIAD+L+
Sbjct:   346 IEEFSFDPLDFGIPRCTLEDLRGGGPDYNADVLRRVLSGESGAIADSLI 394




GO:0000162 "tryptophan biosynthetic process" evidence=IEA;ISS;IMP
GO:0004048 "anthranilate phosphoribosyltransferase activity" evidence=IEA;ISS;TAS
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0009536 "plastid" evidence=IDA
TIGR_CMR|CHY_1585 CHY_1585 "anthranilate phosphoribosyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3524 CPS_3524 "anthranilate phosphoribosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|P00904 trpD "anthranilate synthase component II" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1483 DET_1483 "anthranilate phosphoribosyltransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KST4 trpD "Anthranilate phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1172 VC_1172 "anthranilate phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3021 SO_3021 "anthranilate phosphoribosyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2381 GSU_2381 "anthranilate phosphoribosyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P66992 trpD "Anthranilate phosphoribosyltransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q02166TRPD_ARATH2, ., 4, ., 2, ., 1, 80.82810.97420.5112yesno
B9LEV9TRPD_CHLSY2, ., 4, ., 2, ., 1, 80.51800.94420.6489yesno
A9WCH7TRPD_CHLAA2, ., 4, ., 2, ., 1, 80.51800.94420.6489yesno
B8G5C5TRPD_CHLAD2, ., 4, ., 2, ., 1, 80.50900.94420.6470yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.20.921
4th Layer2.4.2.180.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00016051001
SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (389 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00030640001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (141 aa)
   0.998
GSVIVG00024135001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (517 aa)
   0.998
GSVIVG00029306001
RecName- Full=N-(5'-phosphoribosyl)anthranilate isomerase; EC=5.3.1.24; (262 aa)
   0.998
GSVIVG00029259001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (567 aa)
   0.996
GSVIVG00029073001
SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (396 aa)
   0.987
GSVIVG00023836001
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)
   0.985
GSVIVG00027369001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)
   0.980
GSVIVG00006903001
SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)
   0.977
GSVIVG00030639001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (103 aa)
    0.973
GSVIVG00018206001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (333 aa)
   0.945

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
PLN02641343 PLN02641, PLN02641, anthranilate phosphoribosyltra 1e-159
PRK00188339 PRK00188, trpD, anthranilate phosphoribosyltransfe 1e-118
TIGR01245330 TIGR01245, trpD, anthranilate phosphoribosyltransf 1e-110
pfam00591254 pfam00591, Glycos_transf_3, Glycosyl transferase f 5e-95
COG0547338 COG0547, TrpD, Anthranilate phosphoribosyltransfer 5e-93
PRK14607534 PRK14607, PRK14607, bifunctional glutamine amidotr 1e-78
PRK09522531 PRK09522, PRK09522, bifunctional glutamine amidotr 8e-61
COG0213 435 COG0213, DeoA, Thymidine phosphorylase [Nucleotide 6e-06
PRK04350 490 PRK04350, PRK04350, thymidine phosphorylase; Provi 7e-04
PRK09071323 PRK09071, PRK09071, hypothetical protein; Validate 9e-04
>gnl|CDD|215345 PLN02641, PLN02641, anthranilate phosphoribosyltransferase Back     alignment and domain information
 Score =  443 bits (1141), Expect = e-159
 Identities = 193/229 (84%), Positives = 209/229 (91%)

Query: 1   MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSA 60
           MIK A KV+GL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQG+RSSSSACGSA
Sbjct: 62  MIKRARKVDGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSA 121

Query: 61  DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPM 120
           DVLEALGV IDL PEGV+RCV+E GIGFMM+ KYHPAMK V PVRKKLKVKTVFNILGPM
Sbjct: 122 DVLEALGVAIDLGPEGVKRCVEEVGIGFMMAPKYHPAMKIVAPVRKKLKVKTVFNILGPM 181

Query: 121 LNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEK 180
           LNPA VP AVVGVY+E+LV KMA ALQRFG+KRALVVHSEGLDEMSPLGPG +L+VT EK
Sbjct: 182 LNPARVPHAVVGVYHESLVEKMAKALQRFGMKRALVVHSEGLDEMSPLGPGDVLEVTPEK 241

Query: 181 IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV 229
           IE FSFDPLD+GIPRCTLE L+GG P YNA+VLR VLSGE+GAIADAL+
Sbjct: 242 IEEFSFDPLDFGIPRCTLEDLRGGDPDYNAKVLRDVLSGEKGAIADALI 290


Length = 343

>gnl|CDD|234682 PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|233329 TIGR01245, trpD, anthranilate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|216013 pfam00591, Glycos_transf_3, Glycosyl transferase family, a/b domain Back     alignment and domain information
>gnl|CDD|223621 COG0547, TrpD, Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|237764 PRK14607, PRK14607, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181927 PRK09522, PRK09522, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223291 COG0213, DeoA, Thymidine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|235289 PRK04350, PRK04350, thymidine phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|181637 PRK09071, PRK09071, hypothetical protein; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 233
COG0547338 TrpD Anthranilate phosphoribosyltransferase [Amino 100.0
PLN02641343 anthranilate phosphoribosyltransferase 100.0
PRK07394342 hypothetical protein; Provisional 100.0
PRK08136317 glycosyl transferase family protein; Provisional 100.0
TIGR01245330 trpD anthranilate phosphoribosyltransferase. In ma 100.0
PRK09522531 bifunctional glutamine amidotransferase/anthranila 100.0
PF00591252 Glycos_transf_3: Glycosyl transferase family, a/b 100.0
PRK14607534 bifunctional glutamine amidotransferase/anthranila 100.0
PRK00188339 trpD anthranilate phosphoribosyltransferase; Provi 100.0
PRK09071323 hypothetical protein; Validated 100.0
KOG1438373 consensus Anthranilate phosphoribosyltransferase [ 100.0
PRK06078 434 pyrimidine-nucleoside phosphorylase; Reviewed 100.0
TIGR02644405 Y_phosphoryl pyrimidine-nucleoside phosphorylase. 99.96
PRK04350 490 thymidine phosphorylase; Provisional 99.96
PRK05820 440 deoA thymidine phosphorylase; Reviewed 99.88
TIGR02645 493 ARCH_P_rylase putative thymidine phosphorylase. Me 99.88
TIGR02643 437 T_phosphoryl thymidine phosphorylase. Thymidine ph 99.86
TIGR03327 500 AMP_phos AMP phosphorylase. This enzyme family is 99.84
COG0213 435 DeoA Thymidine phosphorylase [Nucleotide transport 97.17
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=1.8e-72  Score=507.12  Aligned_cols=229  Identities=54%  Similarity=0.884  Sum_probs=221.4

Q ss_pred             CccccccccCCC-CceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcchHHHHHHHcCCCCCCCHHHHHH
Q 026769            1 MIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRR   79 (233)
Q Consensus         1 ~~~~~~~~~~~~-~~~di~Gtg~Dg~~t~nist~aA~vlA~~G~~V~~HG~~~~~~k~Gs~dvle~LGi~~~~~~~~a~~   79 (233)
                      |++++.+++.++ ..+|+|||||||++||||||++|||+|++|+||+|||||++|||+||+|+||+|||+++.+++++++
T Consensus        63 m~~~~~~~~~p~~~~vDi~GTGGDg~~T~NiSt~aA~v~A~~Gv~VaKHGnrs~sSksGsaDvleaLGv~l~~~~e~~~~  142 (338)
T COG0547          63 MREHAPKLPVPAADPVDIVGTGGDGANTINISTAAAIVAAAAGVPVAKHGNRSVSSKSGSADVLEALGVNLELSPEQAAR  142 (338)
T ss_pred             HHHhcccCCCCCCCCCCeecCCCCCCCcccchHHHHHHHHhCCCcEEeECCCCCCCCCcHHHHHHHcCCCCCCCHHHHHH
Confidence            577777777654 3499999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHHhhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEee
Q 026769           80 CVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS  159 (233)
Q Consensus        80 ~L~~~gi~fl~~~~~~P~l~~l~~~R~~Lg~Rt~~Ntl~~LlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lg~~~~lvv~G  159 (233)
                      +|++.||+|||+|.|||+|++++++|++||+||+||++|||+||+++++||+|||||+|.++++++++.+|.++++||||
T Consensus       143 ~l~~~g~~FlfAp~~hp~~k~v~~vR~~LG~RTifN~LGPL~NPa~~~~qliGV~~p~~~~~~A~~l~~LG~~ralvV~G  222 (338)
T COG0547         143 ALEETGIGFLFAPAYHPAMKHVAPVRKELGVRTIFNLLGPLLNPARAKLQLIGVYHPELVELLAEALRLLGVERALVVHG  222 (338)
T ss_pred             HHHhcCeEEEEccccCHHHHHHHHHHHHcCCCchHHhhccccCCCCCCceEEEEeCHHHHHHHHHHHHHhCcceEEEEEC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             -CCccccCCCCCeEEEEEeCCeEEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCchhhhhhc
Q 026769          160 -EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV  229 (233)
Q Consensus       160 -eG~dE~s~~~~t~v~~~~~g~i~~~~i~P~~~gl~~~~~~~l~~~~~~~~a~~~~~vL~G~~~~~~d~~~  229 (233)
                       ||+||++|.++|.|+++++|++++|+++|++||+++.++++++.+|+++|++++++||+|+.++.+|+|+
T Consensus       223 ~~GlDE~~~~~~t~v~~l~~g~i~~~~l~pe~~Gl~~~~~~~l~~~~~~ena~~~~~vL~G~~~~~~d~v~  293 (338)
T COG0547         223 LEGLDEVTPTGTTLVAELKDGEIREYTLTPEDFGLERAPLEDLPGGDPEENAEILRAVLAGEEGPARDAVA  293 (338)
T ss_pred             CCCcccccCCCCceEEEEcCCceEEEEeCHHhcCCCCCchhhcCCCCHHHHHHHHHHHHCCCCcchHHHHH
Confidence             8999999999999999999999999999999999999999999999999999999999998899999875



>PLN02641 anthranilate phosphoribosyltransferase Back     alignment and domain information
>PRK07394 hypothetical protein; Provisional Back     alignment and domain information
>PRK08136 glycosyl transferase family protein; Provisional Back     alignment and domain information
>TIGR01245 trpD anthranilate phosphoribosyltransferase Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PF00591 Glycos_transf_3: Glycosyl transferase family, a/b domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR000312 The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2 Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK00188 trpD anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09071 hypothetical protein; Validated Back     alignment and domain information
>KOG1438 consensus Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06078 pyrimidine-nucleoside phosphorylase; Reviewed Back     alignment and domain information
>TIGR02644 Y_phosphoryl pyrimidine-nucleoside phosphorylase Back     alignment and domain information
>PRK04350 thymidine phosphorylase; Provisional Back     alignment and domain information
>PRK05820 deoA thymidine phosphorylase; Reviewed Back     alignment and domain information
>TIGR02645 ARCH_P_rylase putative thymidine phosphorylase Back     alignment and domain information
>TIGR02643 T_phosphoryl thymidine phosphorylase Back     alignment and domain information
>TIGR03327 AMP_phos AMP phosphorylase Back     alignment and domain information
>COG0213 DeoA Thymidine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
1kgz_A345 Crystal Structure Analysis Of The Anthranilate Phos 5e-46
1v8g_A329 Crystal Structure Of Anthranilate Phosphoribosyltra 1e-37
1vqu_A374 Crystal Structure Of Anthranilate Phosphoribosyltra 3e-34
3qr9_A377 Anthranilate Phosphoribosyltransferase (trpd) From 1e-33
2bpq_A373 Anthranilate Phosphoribosyltransferase (Trpd) From 1e-33
1zvw_A378 The Crystal Structure Of Trpd (Rv2192c) From Mycoba 4e-33
4hkm_A346 Crystal Structure Of An Anthranilate Phosphoribosyl 8e-32
1o17_A345 Anthranilate Phosphoribosyl-Transferase (Trpd) Leng 1e-29
3gbr_A345 Anthranilate Phosphoribosyl-Transferase (Trpd) Doub 6e-24
>pdb|1KGZ|A Chain A, Crystal Structure Analysis Of The Anthranilate Phosphoribosyltransferase From Erwinia Carotovora (current Name, Pectobacterium Carotovorum) Length = 345 Back     alignment and structure

Iteration: 1

Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 133/209 (63%), Gaps = 1/209 (0%) Query: 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXX-XXDVLEALGVVID 71 D DIVGTGGDG N++NIST ++ +AA+CGAKVAK D+L+A G+ +D Sbjct: 85 DFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLD 144 Query: 72 LDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVV 131 + E R+ +D+ + F+ + +YH + PVR++LK +T+FN+LGP++NPA P A++ Sbjct: 145 MSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALI 204 Query: 132 GVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDY 191 GVY+ LVL +A AL+ G K A VVH G+DE++ P + ++ +IE + P D+ Sbjct: 205 GVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGEIESYQLSPQDF 264 Query: 192 GIPRCTLESLQGGGPAYNAEVLRRVLSGE 220 G+ +L +LQGG P N ++L R+L G+ Sbjct: 265 GLQSYSLNALQGGTPEENRDILARLLQGK 293
>pdb|1V8G|A Chain A, Crystal Structure Of Anthranilate Phosphoribosyltransferase (Trpd) From Thermus Thermophilus Hb8 Length = 329 Back     alignment and structure
>pdb|1VQU|A Chain A, Crystal Structure Of Anthranilate Phosphoribosyltransferase 2 (17130499) From Nostoc Sp. At 1.85 A Resolution Length = 374 Back     alignment and structure
>pdb|3QR9|A Chain A, Anthranilate Phosphoribosyltransferase (trpd) From Mycobacterium Tuberculosis (apo Structure) Length = 377 Back     alignment and structure
>pdb|2BPQ|A Chain A, Anthranilate Phosphoribosyltransferase (Trpd) From Mycobacterium Tuberculosis (Apo Structure) Length = 373 Back     alignment and structure
>pdb|1ZVW|A Chain A, The Crystal Structure Of Trpd (Rv2192c) From Mycobacterium Tuberculosis In Complex With Prpp And Magnesium Length = 378 Back     alignment and structure
>pdb|4HKM|A Chain A, Crystal Structure Of An Anthranilate Phosphoribosyltransferase (Target Id Nysgrc-016600) From Xanthomonas Campestris Length = 346 Back     alignment and structure
>pdb|1O17|A Chain A, Anthranilate Phosphoribosyl-Transferase (Trpd) Length = 345 Back     alignment and structure
>pdb|3GBR|A Chain A, Anthranilate Phosphoribosyl-Transferase (Trpd) Double Mutant D83g F149s From S. Solfataricus Length = 345 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
3qr9_A377 Anthranilate phosphoribosyltransferase; anthranili 1e-117
1o17_A345 Anthranilate PRT, anthranilate phosphoribosyltrans 1e-117
1khd_A345 Anthranilate phosphoribosyltransferase; type 3 PRT 1e-116
1vqu_A374 Anthranilate phosphoribosyltransferase 2; 17130499 1e-112
2elc_A329 Trp D, anthranilate phosphoribosyltransferase; str 1e-111
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
1uou_A 474 Thymidine phosphorylase; transferase, glycosyltran 1e-05
2dsj_A 423 Pyrimidine-nucleoside (thymidine) phosphorylase; p 1e-05
1brw_A 433 PYNP, protein (pyrimidine nucleoside phosphorylase 1e-05
2tpt_A 440 Thymidine phosphorylase; transferase, salvage path 2e-05
3h5q_A 436 PYNP, pyrimidine-nucleoside phosphorylase; structu 3e-05
>3qr9_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, magnesium binding, phosphoribosyl pyrophosphate transferase; 1.87A {Mycobacterium tuberculosis} PDB: 1zvw_A* 2bpq_A Length = 377 Back     alignment and structure
 Score =  338 bits (868), Expect = e-117
 Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 5/233 (2%)

Query: 1   MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSAC 57
           M+ +A  +       DAVD+VGTGGDG NTVN+ST A+I+ AA G  V K G+R++SS  
Sbjct: 85  MLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLS 144

Query: 58  GSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNIL 117
           G AD LEALGV IDL P+ V R + E GIGF  + ++HP+ +    VR+++ V TVFN+L
Sbjct: 145 GGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLL 204

Query: 118 GPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDV 176
           GP+ NPA     ++G    +L   MA           LVVH  +GLDE++      I  V
Sbjct: 205 GPLTNPARPRAGLIGCAFADLAEVMAGVFAARR-SSVLVVHGDDGLDELTTTTTSTIWRV 263

Query: 177 TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV 229
               +++ +FDP  +G  R  L+ L GG    NA  +R VL G RG + DA+V
Sbjct: 264 AAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVV 316


>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Length = 345 Back     alignment and structure
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Length = 345 Back     alignment and structure
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Length = 374 Back     alignment and structure
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Length = 329 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A Length = 474 Back     alignment and structure
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} Length = 423 Back     alignment and structure
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 Length = 433 Back     alignment and structure
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A Length = 440 Back     alignment and structure
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} Length = 436 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
1khd_A345 Anthranilate phosphoribosyltransferase; type 3 PRT 100.0
1vqu_A374 Anthranilate phosphoribosyltransferase 2; 17130499 100.0
1o17_A345 Anthranilate PRT, anthranilate phosphoribosyltrans 100.0
3r88_A377 Anthranilate phosphoribosyltransferase; anthranili 100.0
2elc_A329 Trp D, anthranilate phosphoribosyltransferase; str 100.0
4hkm_A346 Anthranilate phosphoribosyltransferase; structural 100.0
2dsj_A 423 Pyrimidine-nucleoside (thymidine) phosphorylase; p 100.0
3h5q_A 436 PYNP, pyrimidine-nucleoside phosphorylase; structu 100.0
1uou_A 474 Thymidine phosphorylase; transferase, glycosyltran 100.0
1brw_A 433 PYNP, protein (pyrimidine nucleoside phosphorylase 100.0
2tpt_A 440 Thymidine phosphorylase; transferase, salvage path 100.0
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A Back     alignment and structure
Probab=100.00  E-value=3.6e-66  Score=469.49  Aligned_cols=229  Identities=41%  Similarity=0.745  Sum_probs=212.5

Q ss_pred             CccccccccCC-CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCC-cchHHHHHHHcCCCCCCCHHHHH
Q 026769            1 MIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSS-ACGSADVLEALGVVIDLDPEGVR   78 (233)
Q Consensus         1 ~~~~~~~~~~~-~~~~di~Gtg~Dg~~t~nist~aA~vlA~~G~~V~~HG~~~~~~-k~Gs~dvle~LGi~~~~~~~~a~   78 (233)
                      |++++.+++.. +.++|+|||||||.+||||||++|+++|++|+||+|||||+++| |+||+|+||+||++++.++++++
T Consensus        72 m~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~~~~~~~~~  151 (345)
T 1khd_A           72 LLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLDMSAEDSR  151 (345)
T ss_dssp             HHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCTTCCHHHHH
T ss_pred             HHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCCCCCHHHHH
Confidence            56777777653 35899999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             HHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHHhhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEe
Q 026769           79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH  158 (233)
Q Consensus        79 ~~L~~~gi~fl~~~~~~P~l~~l~~~R~~Lg~Rt~~Ntl~~LlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lg~~~~lvv~  158 (233)
                      ++|++.||+|+++|.|||+|+++.++|++||+||+||+++||+||++++++|+|||||+|.++|+++++.+|.++++||+
T Consensus       152 ~~l~~~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~  231 (345)
T 1khd_A          152 QALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVH  231 (345)
T ss_dssp             HHHHHHSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHCCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCccccCCCCCeEEEEEeCCeEEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCc-hhhhhhc
Q 026769          159 SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG-AIADALV  229 (233)
Q Consensus       159 GeG~dE~s~~~~t~v~~~~~g~i~~~~i~P~~~gl~~~~~~~l~~~~~~~~a~~~~~vL~G~~~-~~~d~~~  229 (233)
                      |||+||+|+.++|.|+++++|++++|+|+|++||++.++++++..+++++|+++++++|+|+.+ +.+|+|+
T Consensus       232 GdG~dEis~~~~t~v~~~~~g~i~~~~i~p~~~G~~~~~~~~l~~g~~~e~a~~~~~vL~G~~~~~~~d~v~  303 (345)
T 1khd_A          232 GGGMDEVAIHTPTQVAELNNGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVA  303 (345)
T ss_dssp             ETTBSSCCSSSCEEEEEEETTEEEEEEECGGGGTCCCBCGGGGBCCSHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred             CCCcceecCCCceEEEEEeCCEEEEEEECHHHcCCCcCCccccCCCCHHHHHHHHHHHHCCCCCccHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999976 8898875



>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP} Back     alignment and structure
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A* Back     alignment and structure
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A Back     alignment and structure
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A Back     alignment and structure
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV} Back     alignment and structure
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus} Back     alignment and structure
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A Back     alignment and structure
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 Back     alignment and structure
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 233
d1o17a2273 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltra 4e-61
d1khda2264 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltra 2e-44
d2elca2264 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltra 3e-43
d1uoua2273 c.27.1.1 (A:101-373) Thymidine phosphorylase {Huma 5e-35
d1brwa2260 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphor 6e-34
d2tpta2265 c.27.1.1 (A:71-335) Thymidine phosphorylase {Esche 5e-33
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Anthranilate phosphoribosyltransferase (TrpD)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
 Score =  191 bits (485), Expect = 4e-61
 Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 2/218 (0%)

Query: 13  DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDL 72
           +A+D  GTGGDG  TVN+ST ++IL +     VAK G+R+ S   GSADVLEALG  I +
Sbjct: 3   NAIDTAGTGGDGLGTVNVSTASAILLSLVN-PVAKHGNRAVSGKSGSADVLEALGYNIIV 61

Query: 73  DPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVG 132
            PE  +  V++    F+ +  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++G
Sbjct: 62  PPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMG 121

Query: 133 VYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDY 191
           V++++ +  ++ +       + ++V+ E  +DE+SP+G   +  V++  IE    +  D+
Sbjct: 122 VFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEVKLNVTDF 181

Query: 192 GIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV 229
           GI    +E L       +A  + R   G+   +A+ + 
Sbjct: 182 GISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIK 219


>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Length = 264 Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Length = 264 Back     information, alignment and structure
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Length = 273 Back     information, alignment and structure
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 260 Back     information, alignment and structure
>d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Length = 265 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
d1o17a2273 Anthranilate phosphoribosyltransferase (TrpD) {Arc 100.0
d1khda2264 Anthranilate phosphoribosyltransferase (TrpD) {Pec 100.0
d2elca2264 Anthranilate phosphoribosyltransferase (TrpD) {The 100.0
d1uoua2273 Thymidine phosphorylase {Human (Homo sapiens) [Tax 100.0
d1brwa2260 Pyrimidine nucleoside phosphorylase {Bacillus stea 100.0
d2tpta2265 Thymidine phosphorylase {Escherichia coli [TaxId: 100.0
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
domain: Anthranilate phosphoribosyltransferase (TrpD)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00  E-value=2.1e-73  Score=500.28  Aligned_cols=217  Identities=36%  Similarity=0.599  Sum_probs=208.9

Q ss_pred             CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcchHHHHHHHcCCCCCCCHHHHHHHHHHcCeeeeec
Q 026769           12 GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMS   91 (233)
Q Consensus        12 ~~~~di~Gtg~Dg~~t~nist~aA~vlA~~G~~V~~HG~~~~~~k~Gs~dvle~LGi~~~~~~~~a~~~L~~~gi~fl~~   91 (233)
                      ++++|||||||||.+||||||++||++|++| ||+|||||++|||+||+|+||+|||+++.++++++++|++.||+|+++
T Consensus         2 p~~~D~~GTGgDg~~t~NiSt~~a~v~a~~g-~VaKHGnr~~ssk~GSaDvLe~LGi~~~~~~~~~~~~l~~~g~~FlfA   80 (273)
T d1o17a2           2 PNAIDTAGTGGDGLGTVNVSTASAILLSLVN-PVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFA   80 (273)
T ss_dssp             TTCEECCC----CCCBCCHHHHHHHHHTTTS-CEEEEECCCSSSSCSHHHHHHHHTBCCCCCHHHHHHHHHHHSEEEEEH
T ss_pred             CCccccCcCCCCCCCCcchhHHHHHHHhcCC-cEEEECCCCCCCCcCHHHHHHHcCCCCCCCHHHHHHHHHHcCceEeec
Confidence            4689999999999999999999999999988 999999999999999999999999999999999999999999999999


Q ss_pred             ccccHHhhhhHHHHhhcCCCchhHHhhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEee-CCccccCCCCC
Q 026769           92 TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGP  170 (233)
Q Consensus        92 ~~~~P~l~~l~~~R~~Lg~Rt~~Ntl~~LlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lg~~~~lvv~G-eG~dE~s~~~~  170 (233)
                      |.|||+|+++.++|++||+||+||++|||+||+++++||+|||||+|.++|+++++.+|.++++|||| ||+||+|+.++
T Consensus        81 p~~hPamk~v~~vRk~Lg~rTiFN~lgPL~NPa~~~~qliGv~~~~~~~~~a~~l~~lg~~~a~vv~G~dG~DEis~~g~  160 (273)
T d1o17a2          81 QYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGN  160 (273)
T ss_dssp             HHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEETTTBSSCCSSSE
T ss_pred             cccChHHHHHHHHHHHcCCCchhhhhhhccCCcCcceeeeccccHHHHHHHHHHHHhhcccceEEecCCccccchhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             eEEEEEeCCeEEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCchhhhhhc
Q 026769          171 GLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALV  229 (233)
Q Consensus       171 t~v~~~~~g~i~~~~i~P~~~gl~~~~~~~l~~~~~~~~a~~~~~vL~G~~~~~~d~~~  229 (233)
                      |.|+++++|++++++|+|+|||++..+++++.++|+++|+++++++|+|+.++++|+|+
T Consensus       161 t~v~~~~~g~i~~~~i~P~d~Gl~~~~~~~l~gg~~~ena~~i~~il~G~~~~~~d~V~  219 (273)
T d1o17a2         161 TFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIK  219 (273)
T ss_dssp             EEEEEEETTEEEEEEEEGGGGTCCCCCGGGTBCSSHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred             ceeeecccccceeeeeehhhhcccccccccccccCchHHHHHHHHHHcCCCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999875



>d1khda2 c.27.1.1 (A:81-344) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d2elca2 c.27.1.1 (A:66-329) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2tpta2 c.27.1.1 (A:71-335) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure