Citrus Sinensis ID: 026823

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
MEALGLNMGFEETELRLGLPGNRVLSEGEGARKRGFSETVDLKLNLSSKDTSEKVKSFQKEKNPLPRATDPPAKPPAKTQVVGWPPVRSFRKNMLGVVQKSSGEESDMAGGNNAAFVKVSMDGAPYLRKVDLRMYNTYQDLYHALGKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWGMFVESCKRLRIVKGTEAIGLAPRAMEKCKNRR
cccccccccccHHHcccccccccccccccccccccccHHHHcccccccccccHHHccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccEEEEECccccccEEEcccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHcccccccccEEEcccccEEEcccccHHHHHHHccccEEEcccHHccccHHHHHHHHHcc
*****LN*GFEETELRLGL***************************************************************GWP****************************AAFVKVSMDGAPYLRKVDLRMYNTYQDLYHALGKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWGMFVESCKRLRIVKGTEAIGLA***********
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MEALGLNMGFEETELRLGLPGNRVLSEGEGARKRGFSETVDLKLNLSSKDTSEKVKSFQKEKNPLPRATDPPAKPPAKTQVVGWPPVRSFRKNMLGVVQKSSGEESDMAGGNNAAFVKVSMDGAPYLRKVDLRMYNTYQDLYHALGKMFSSFTIGNCGSQGMKDFMNESKLMDLLNGSDYVPTYEDKDGDWMLVGDVPWGMFVESCKRLRIVKGTEAIGLAPRAMEKCKNRR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Auxin-induced protein AUX28 Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.confidentP13089
Auxin-responsive protein IAA30 Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.probableP0C132
Auxin-responsive protein IAA16 Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.probableO24407

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Q1O, chain A
Confidence level:probable
Coverage over the Query: 114-155,173-207
View the alignment between query and template
View the model in PyMOL