Citrus Sinensis ID: 026846

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
Protein Sequence
MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENNEDDDEETEYED
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccHHHccc
Secondary Structure Prediction (SSPRO)
cccHHEccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHHcccccccccccEccccccccEEccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEcccccccccccEEccccccccccccccc
Coil and Loop (DISEMBL)
MKAVAFSldfnlrshmkthsqenyhicpypdcgkryaHEYKLKNHiashheknaavevpryatpperitktpkppagvygsasserpyacpyegceKAYIHEYKLKLHlkrehpghmsdenaenattnadnemdegsdqdayagkrvngksqkqsrakpnlkmppakvtqrksstpspatlnvvrkqqwtpkeevyeeedseeteedrdnvedgfrygennedddeeteyed
Flexible Loop (DISEMBL)
MKAVAFSLDFNLRshmkthsqenyhICPYPDCGKRYAHEYKLKNHIashheknaavevpryatpperitktpkppagvygsasserpyaCPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENATTNADNEMDEGSDQDayagkrvngksqkqsrakpnlkmppakvtqrksstpspatlnvvrkqqwtpkeevyeeedseeteedrdnvedgfrygennedddeeteyed
Low Complexity Region (SEG)
MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSdenaenattnadneMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPKeevyeeedseeteeDRDNVEDGFRYGennedddeeteyed
Disordered region (IsUnstruct)
*******LDFNL*******SQENYHICPYPDCGKRYAHEYKLKNHIAS***************************************YACPYEGCEKAYIHEYKLKLHL***************************************************************************************************************************
Disordered Region (DISOPRED)
*KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVP************************SERPYACPYEGCEKAYIHEYKLKLHLKREHPG*********************************************************************************************************************
Disordered Region (DISEMBL)
MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTP*************RPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENATTNADNEMDEGSDQDAYA************************************TLNVVRKQQWT********************VEDGFRYGEN************
Disordered Region (DISPRO)
**AVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKRE**************************************************************************Q*WTPKE**Y**********DRDNVEDGFRYG**************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENNEDDDEETEYED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	232	2.2.26 [Sep-21-2011]
Q2V3L3	387	Uncharacterized zinc fing	yes	no	0.909	0.545	0.647	7e-67
B4F7E9	568	Zinc finger protein 76 OS	yes	no	0.443	0.181	0.300	7e-08
P25490	414	Transcriptional repressor	yes	no	0.047	0.026	0.454	7e-08
P36508	570	Zinc finger protein 76 OS	no	no	0.443	0.180	0.283	8e-08
Q00899	414	Transcriptional repressor	yes	no	0.047	0.026	0.454	8e-08
Q96MM3	310	Zinc finger protein 42 ho	no	no	0.064	0.048	0.437	1e-07
Q8BMU0	568	Zinc finger protein 76 OS	no	no	0.443	0.181	0.300	2e-07
Q2FAY8	376	Transcription factor YY2	N/A	no	0.047	0.029	0.454	2e-07
P0C6P6	376	Transcription factor YY2	no	no	0.047	0.029	0.454	2e-07
Q3TTC2	378	Transcription factor YY2	no	no	0.047	0.029	0.454	2e-07

>sp|Q2V3L3|Y4634_ARATH Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1

 Score =  253 bits (646), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 147/227 (64%), Positives = 168/227 (74%), Gaps = 16/227 (7%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPY  C KRYAHEYKLKNH+A++HEKN   E P+Y  P
Sbjct: 148 AFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPP 207

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
            E++ +T K PA V G  SS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGH+ +ENA+ 
Sbjct: 208 AEKVLRTVKTPATVCG-PSSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADT 266

Query: 125 ATTNAD-----NEMDEGSDQDAYAGKRVNGKSQ---KQSRAKPNLKMPPAKVTQRKSSTP 176
            T N       NE+D+GSDQD Y     NGK Q   +QSRAKPN++ PPAKV  +K ST 
Sbjct: 267 PTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKVG-KKGSTS 325

Query: 177 SPATLNVVRKQQWTPK-----EEVYEEEDSEETEEDRDNVEDGFRYG 218
           SPA   + +K  W  K      E  EEEDSEETEEDRDNVEDG+R+G
Sbjct: 326 SPAKARIAKK-PWQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFG 371

Arabidopsis thaliana (taxid: 3702)

>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPP 65
           ++   +L+ H + H+ +  + C +P CGK +A  Y LK+H+ +H       E P Y  P 
Sbjct: 176 YTTAHHLKVHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTH-----TGEKP-YKCPE 229

Query: 66  ERITKTPKPPAGV---YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           E  +K  K    +     + + ERP+ CP+EGC +++      K+H+ R H G
Sbjct: 230 ELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHV-RTHTG 281

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|P25490|TYY1_HUMAN Transcriptional repressor protein YY1 OS=Homo sapiens GN=YY1 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 32/44 (72%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
           FSLDFNLR+H++ H+ +  ++CP+  C K++A    LK+HI +H
Sbjct: 364 FSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 407

Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair; proposed to target the INO80 complex to YY1-responsive elements.

Homo sapiens (taxid: 9606)

>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2

 Score = 57.4 bits (137), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPP 65
           ++   +L+ H + H+ +  + C +P CGK +A  Y LK+H+ +H  +        Y  P 
Sbjct: 176 YTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKP------YKCPE 229

Query: 66  ERITKTPKPPAGV---YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           E  +K  K    +     + + ERP+ CP+EGC +++      K+H+ R H G
Sbjct: 230 ELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHV-RTHTG 281

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q00899|TYY1_MOUSE Transcriptional repressor protein YY1 OS=Mus musculus GN=Yy1 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 32/44 (72%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
           FSLDFNLR+H++ H+ +  ++CP+  C K++A    LK+HI +H
Sbjct: 364 FSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 407

Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair; proposed to target the INO80 complex to YY1-responsive elements.

Mus musculus (taxid: 10090)

>sp|Q96MM3|ZFP42_HUMAN Zinc finger protein 42 homolog OS=Homo sapiens GN=ZFP42 PE=1 SV=2

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKN 53
           FSLDFNLR+H++ H+ E   +CP+  C +R+     LK HI +H   N
Sbjct: 256 FSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTN 303

Involved in self-renewal property of ES cells (By similarity). May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPP 65
           ++   +L+ H + H+ +  + C +P CGK +A  Y LK+H+ +H       E P Y  P 
Sbjct: 176 YTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTH-----TGEKP-YKCPE 229

Query: 66  ERITKTPKPPAGV---YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           E  +K  K    +     + + ERP+ CP+EGC +++      K+H+ R H G
Sbjct: 230 ELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHV-RTHTG 281

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q2FAY8|TYY2_RATRT Transcription factor YY2 OS=Rattus rattus GN=Yy2 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 31/44 (70%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
           FSLDFNLR+H++ H+ +   +CP+  C K++A    LK+HI +H
Sbjct: 326 FSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 369

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Rattus rattus (taxid: 10117)

>sp|P0C6P6|TYY2_RAT Transcription factor YY2 OS=Rattus norvegicus GN=Yy2 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 31/44 (70%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
           FSLDFNLR+H++ H+ +   +CP+  C K++A    LK+HI +H
Sbjct: 326 FSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 369

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Rattus norvegicus (taxid: 10116)

>sp|Q3TTC2|TYY2_MOUSE Transcription factor YY2 OS=Mus musculus GN=Yy2 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 31/44 (70%)

Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
           FSLDFNLR+H++ H+ +   +CP+  C K++A    LK+HI +H
Sbjct: 328 FSLDFNLRTHVRIHTGDKPFVCPFDACNKKFAQSTNLKSHILTH 371

Functions as a multifunctional transcription factor that may exhibit positive and negative control on a large number of genes. May antagonize YY1 and function in development and differentiation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
224129640	378	predicted protein [Populus trichocarpa]	0.926	0.568	0.793	9e-92
118489341	375	unknown [Populus trichocarpa x Populus d	0.926	0.573	0.782	2e-90
225448166	372	PREDICTED: uncharacterized zinc finger p	0.918	0.572	0.803	7e-89
147819063	355	hypothetical protein VITISV_038786 [Viti	0.909	0.594	0.812	3e-88
255576241	372	nucleic acid binding protein, putative [	0.879	0.548	0.757	1e-87
359486172	371	PREDICTED: uncharacterized zinc finger p	0.913	0.571	0.799	7e-87
388503846	375	unknown [Medicago truncatula]	0.931	0.576	0.759	3e-86
255648191	371	unknown [Glycine max]	0.918	0.574	0.756	7e-84
388522029	375	unknown [Lotus japonicus]	0.922	0.570	0.740	3e-83
356512592	371	PREDICTED: uncharacterized zinc finger p	0.918	0.574	0.752	5e-83

>gi|224129640|ref|XP_002328766.1| predicted protein [Populus trichocarpa] gi|222839064|gb|EEE77415.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (876), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 173/218 (79%), Positives = 185/218 (84%), Gaps = 3/218 (1%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYP+CGKRYAHEYKLKNHI SHHEKN   EV +YATP
Sbjct: 151 AFSLDFNLRSHMKTHSQENYHICPYPECGKRYAHEYKLKNHIGSHHEKNPTPEVVKYATP 210

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
           PERI K  K P GVYGSASS+RPY CPYEGCEK YIHEYKLKLHL+REHPGHM+DENAEN
Sbjct: 211 PERIPKNAKTPPGVYGSASSDRPYICPYEGCEKDYIHEYKLKLHLRREHPGHMADENAEN 270

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           AT NADNE+DE SDQDAY GKRVNGKSQKQSR+KPNLKMPP K+ QRK S+PSPATLNVV
Sbjct: 271 ATPNADNELDEASDQDAYGGKRVNGKSQKQSRSKPNLKMPPVKIRQRKGSSPSPATLNVV 330

Query: 185 RKQQWTPK--EEVYEEEDSEETEEDRDNVEDGFRYGEN 220
           +K  WT K      EE+  E  EEDRDN EDG+RYG N
Sbjct: 331 KK-PWTIKDETYEEEEDSEETEEEDRDNAEDGWRYGGN 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489341|gb|ABK96475.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 169/216 (78%), Positives = 184/216 (85%), Gaps = 1/216 (0%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPY +CGKRYAHEYKLKNHIASHHEKN   +V RYATP
Sbjct: 150 AFSLDFNLRSHMKTHSQENYHICPYSECGKRYAHEYKLKNHIASHHEKNPTPDVVRYATP 209

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
           PERI K PKPP+GVYGSASS+RPY CPYEGCEK YIHEYKLKLHL+REHP HM+DENAEN
Sbjct: 210 PERILKNPKPPSGVYGSASSDRPYICPYEGCEKDYIHEYKLKLHLRREHPDHMADENAEN 269

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           A +NADNEMDE SDQDAY GKRVNGKSQK SR KPNLK PP K+ QRK S+ SPATLNV+
Sbjct: 270 ANSNADNEMDEASDQDAYGGKRVNGKSQKHSRPKPNLKTPPVKIRQRKGSSSSPATLNVM 329

Query: 185 RKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGEN 220
           +K  W  K++ YEE+  E  EED DN EDG+RYG N
Sbjct: 330 KK-PWPVKDDTYEEDSEETEEEDHDNAEDGWRYGGN 364

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448166|ref|XP_002265428.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like isoform 1 [Vitis vinifera]

 Score =  332 bits (851), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 172/214 (80%), Positives = 193/214 (90%), Gaps = 1/214 (0%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHI SHHEKN+ ++VP+Y  P
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIMSHHEKNSVMDVPKYVPP 205

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
            E++TKTPKP  GVYGSA+S+RPY+CPYEGCEK+YIHEYKLKLHL+REHPGH+SDENAEN
Sbjct: 206 AEKLTKTPKPSGGVYGSAASDRPYSCPYEGCEKSYIHEYKLKLHLRREHPGHISDENAEN 265

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           A  N DNE DEGSDQDAY GKR NGKSQK S+AK +LKMPP+KVTQRK+S P+PA LNV+
Sbjct: 266 AQANIDNEPDEGSDQDAYVGKRGNGKSQKASKAKSSLKMPPSKVTQRKASNPAPANLNVI 325

Query: 185 RKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYG 218
           +K QW  KEE+YEEEDSEETEEDRDNVEDG+RY 
Sbjct: 326 KK-QWPVKEEIYEEEDSEETEEDRDNVEDGWRYA 358

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819063|emb|CAN73771.1| hypothetical protein VITISV_038786 [Vitis vinifera]

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 173/213 (81%), Positives = 193/213 (90%), Gaps = 2/213 (0%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHI SHHEK + ++VP+Y  P
Sbjct: 130 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIMSHHEK-SVMDVPKYVPP 188

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
            E++TKTPKP  GVYGSA+S+RPY+CPYEGCEK+YIHEYKLKLHL+REHPGH+SDENAEN
Sbjct: 189 AEKLTKTPKPSGGVYGSAASDRPYSCPYEGCEKSYIHEYKLKLHLRREHPGHISDENAEN 248

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           A  N DNE DEGSDQDAY GKR NGKSQK S+AKPNLKMPP+KVTQRK+S P+PA LNV+
Sbjct: 249 AQANIDNEPDEGSDQDAYVGKRGNGKSQKASKAKPNLKMPPSKVTQRKASNPAPANLNVI 308

Query: 185 RKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRY 217
           +K QW  KEE+YEEEDSEETEEDRDNVEDG+RY
Sbjct: 309 KK-QWPVKEEIYEEEDSEETEEDRDNVEDGWRY 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576241|ref|XP_002529014.1| nucleic acid binding protein, putative [Ricinus communis] gi|223531554|gb|EEF33384.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 162/214 (75%), Positives = 184/214 (85%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYP+CGKRYAHEYKLKNH+++HHEK++ VE  +YATP
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPECGKRYAHEYKLKNHVSAHHEKHSTVETVKYATP 205

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
           PE++TK  KP AGVY + + +RPYACPYEGC KAYIHEYKLKLHL++EHPGHMSDENAEN
Sbjct: 206 PEKVTKVSKPSAGVYATPTLDRPYACPYEGCIKAYIHEYKLKLHLRKEHPGHMSDENAEN 265

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           A+ NADNEMDEGSDQDAYA K VNGK+QKQSR KPNLKMPPAK+TQRK S+P  ATLNVV
Sbjct: 266 ASPNADNEMDEGSDQDAYAEKHVNGKTQKQSRPKPNLKMPPAKLTQRKGSSPHRATLNVV 325

Query: 185 RKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYG 218
           +K     +E   EE+  E  EEDRDN EDG+RYG
Sbjct: 326 KKPWPVKEETYEEEDSEETEEEDRDNAEDGWRYG 359

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486172|ref|XP_003633405.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like isoform 2 [Vitis vinifera] gi|297739551|emb|CBI29733.3| unnamed protein product [Vitis vinifera]

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 171/214 (79%), Positives = 192/214 (89%), Gaps = 2/214 (0%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHI SHHEK + ++VP+Y  P
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIMSHHEK-SVMDVPKYVPP 204

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAEN 124
            E++TKTPKP  GVYGSA+S+RPY+CPYEGCEK+YIHEYKLKLHL+REHPGH+SDENAEN
Sbjct: 205 AEKLTKTPKPSGGVYGSAASDRPYSCPYEGCEKSYIHEYKLKLHLRREHPGHISDENAEN 264

Query: 125 ATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNVV 184
           A  N DNE DEGSDQDAY GKR NGKSQK S+AK +LKMPP+KVTQRK+S P+PA LNV+
Sbjct: 265 AQANIDNEPDEGSDQDAYVGKRGNGKSQKASKAKSSLKMPPSKVTQRKASNPAPANLNVI 324

Query: 185 RKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYG 218
           +K QW  KEE+YEEEDSEETEEDRDNVEDG+RY 
Sbjct: 325 KK-QWPVKEEIYEEEDSEETEEDRDNVEDGWRYA 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503846|gb|AFK39989.1| unknown [Medicago truncatula]

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 167/220 (75%), Positives = 186/220 (84%), Gaps = 4/220 (1%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVP-RYAT 63
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK+  ++VP +YAT
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKSTPIDVPIKYAT 205

Query: 64  PP-ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENA 122
           PP E+ TKT +P    YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH++DENA
Sbjct: 206 PPSEKQTKTARPSGATYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHINDENA 265

Query: 123 ENATT-NADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATL 181
            +A   NA+NEMDE SD DAY GKR NGKSQ+QSR KP+LKMPP+KV QRK STP+PAT 
Sbjct: 266 MHALANNAENEMDEASDHDAYGGKRSNGKSQRQSRPKPSLKMPPSKVAQRKGSTPTPATF 325

Query: 182 NVVRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENN 221
           N+ +K  W  KEE Y+E+  E  EEDRDNVEDG+RY  NN
Sbjct: 326 NMAKK-PWPVKEETYDEDSEETEEEDRDNVEDGWRYAGNN 364

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648191|gb|ACU24549.1| unknown [Glycine max]

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 165/218 (75%), Positives = 183/218 (83%), Gaps = 5/218 (2%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA+V+V +Y TP
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNASVDVTKYTTP 205

Query: 65  P-ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAE 123
           P E+ TKTPKP  G YGSASS+RPYACPY+GCEKAYIHEYKL+LHLKREHPG M+DENAE
Sbjct: 206 PSEKQTKTPKPSGGAYGSASSDRPYACPYDGCEKAYIHEYKLRLHLKREHPGLMADENAE 265

Query: 124 NATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNV 183
           +A  N DNEMDE SD DAY  KR NGK QKQS+ KPNLK+PP+K+ +RK STPS      
Sbjct: 266 HAQANVDNEMDEASDHDAYVAKRSNGKIQKQSKPKPNLKLPPSKIAKRKLSTPSL----T 321

Query: 184 VRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENN 221
           V K  W  K+E ++EEDSEETEEDRDNVEDG+RY   N
Sbjct: 322 VNKNSWPVKDEPFDEEDSEETEEDRDNVEDGWRYAGGN 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522029|gb|AFK49076.1| unknown [Lotus japonicus]

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 163/220 (74%), Positives = 184/220 (83%), Gaps = 6/220 (2%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNH+ASHHEKN ++E+P+Y TP
Sbjct: 148 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHVASHHEKNPSLELPKYTTP 207

Query: 65  P-ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAE 123
           P E+ TKT KP  G Y SASS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGHMS+ENA 
Sbjct: 208 PSEKQTKTTKPSGGAYTSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSEENAV 267

Query: 124 NATTNADNEMDEGSDQDAYAG-KRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSP-ATL 181
           +A  NADNEMDE SDQDAY G KR NGKSQKQS+ KPNLK+PP+K+  RK S P+P A L
Sbjct: 268 HALANADNEMDEASDQDAYGGVKRSNGKSQKQSKPKPNLKLPPSKMA-RKGSAPTPSAPL 326

Query: 182 NVVRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENN 221
           NV++K  W  K+E Y+E+  E  E+  DNVEDG+RY  NN
Sbjct: 327 NVIKK-PWPVKQETYDEDSEETEEDR-DNVEDGWRYAGNN 364

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512592|ref|XP_003525002.1| PREDICTED: uncharacterized zinc finger protein At4g06634-like [Glycine max]

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 164/218 (75%), Positives = 182/218 (83%), Gaps = 5/218 (2%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA+V+V +Y TP
Sbjct: 146 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNASVDVTKYTTP 205

Query: 65  P-ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAE 123
           P E+ TKT KP  G YGSASS+RPYACPY+GCEKAYIHEYKL+LHLKREHPG M+DENAE
Sbjct: 206 PSEKQTKTSKPSGGAYGSASSDRPYACPYDGCEKAYIHEYKLRLHLKREHPGLMADENAE 265

Query: 124 NATTNADNEMDEGSDQDAYAGKRVNGKSQKQSRAKPNLKMPPAKVTQRKSSTPSPATLNV 183
           +A  N DNEMDE SD DAY  KR NGK QKQS+ KPNLK+PP+K+ +RK STPS      
Sbjct: 266 HAQANVDNEMDEASDHDAYVAKRSNGKIQKQSKPKPNLKLPPSKIAKRKLSTPSL----T 321

Query: 184 VRKQQWTPKEEVYEEEDSEETEEDRDNVEDGFRYGENN 221
           V K  W  K+E ++EEDSEETEEDRDNVEDG+RY   N
Sbjct: 322 VNKNSWPVKDEPFDEEDSEETEEDRDNVEDGWRYAGGN 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
TAIR|locus:1005716361	387	YY1 "Yin Yang 1" [Arabidopsis	0.909	0.545	0.568	1.4e-62
UNIPROTKB|E1C0K9	336	ZIC4 "Uncharacterized protein"	0.439	0.303	0.304	1.9e-12
UNIPROTKB|E7EX64	340	ZNF76 "Zinc finger protein 76"	0.422	0.288	0.314	3.8e-10
UNIPROTKB|F1M0B6	180	Zic5 "Protein Zic5" [Rattus no	0.418	0.538	0.318	4.1e-10
FB|FBgn0004859	1397	ci "cubitus interruptus" [Dros	0.452	0.075	0.311	4.3e-10
UNIPROTKB|F1NX64	265	ZIC4 "Uncharacterized protein"	0.418	0.366	0.327	5e-10
UNIPROTKB|Q8N9L1	334	ZIC4 "Zinc finger protein ZIC	0.418	0.290	0.327	6.1e-10
UNIPROTKB|E1BAQ8	335	ZIC4 "Uncharacterized protein"	0.418	0.289	0.327	6.1e-10
UNIPROTKB|F1PIU4	335	ZIC4 "Uncharacterized protein"	0.418	0.289	0.327	6.1e-10
UNIPROTKB|F1SKC8	371	ZIC4 "Uncharacterized protein"	0.418	0.261	0.327	7.8e-10

TAIR|locus:1005716361 YY1 "Yin Yang 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 129/227 (56%), Positives = 148/227 (65%)

Query:     5 AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
             AFSLDFNLRSHMKTHSQENYHICPY  C KRYAHEYKLKNH+A++HEKN   E P+Y  P
Sbjct:   148 AFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTPP 207

Query:    65 PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSXXXXXX 124
              E++ +T K PA V G  SS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGH+       
Sbjct:   208 AEKVLRTVKTPATVCGP-SSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADT 266

Query:   125 XXXXXXXX-----MDEGSDQDAYAGKRVNGKSQ---KQSRAKPNLKMPPAKVTQRKSSTP 176
                          +D+GSDQD Y     NGK Q   +QSRAKPN++ PPAKV  +K ST 
Sbjct:   267 PTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKVG-KKGSTS 325

Query:   177 SPATLNVVRKQQWTPKXXXXXXXX-----XXXXXXDRDNVEDGFRYG 218
             SPA   + +K  W  K                   DRDNVEDG+R+G
Sbjct:   326 SPAKARIAKKP-WQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFG 371

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0043565 "sequence-specific DNA binding" evidence=IDA

UNIPROTKB|E1C0K9 ZIC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 149 (57.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
 Identities = 32/105 (30%), Positives = 51/105 (48%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPP 65
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  +     V      P
Sbjct:   184 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCVKEGCDRP 243

Query:    66 ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
                +   K  + V+   +S++PY C   GC+K+Y H   L+ H+K
Sbjct:   244 FANSSDRKKHSHVH---TSDKPYNCKVRGCDKSYTHPSSLRKHMK 285

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E7EX64 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 34/108 (31%), Positives = 55/108 (50%)

Query:    11 NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITK 70
             +L+ H + H+ +  + C +P CGK +A  Y LK+H+ +H       E P Y  P E  +K
Sbjct:   181 HLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTH-----TGEKP-YKCPEELCSK 234

Query:    71 TPKPPAGVYGSA---SSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
               K    +       + ERP+ CP+EGC +++      K+H+ R H G
Sbjct:   235 AFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHV-RTHTG 281

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1M0B6 Zic5 "Protein Zic5" [Rattus norvegicus (taxid:10116)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 35/110 (31%), Positives = 55/110 (50%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVP----R 60
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK    E      +
Sbjct:    73 FKAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRK 132

Query:    61 YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
             +A   +R     K  + V+   +S++PY C   GC+K+Y H   L+ H+K
Sbjct:   133 FANSSDR-----KKHSHVH---TSDKPYYCKIRGCDKSYTHPSSLRKHMK 174

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0004859 ci "cubitus interruptus" [Drosophila melanogaster (taxid:7227)]

 Score = 138 (53.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
 Identities = 34/109 (31%), Positives = 47/109 (43%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVPRYATP 64
             F   + L  HM+ H+ E  H C +  C K Y+    LK H+ SH  EK    E P  +  
Sbjct:   498 FKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKA 557

Query:    65 PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH 113
                 +   K     +   S+E+PY C   GC K Y     L+ H+K  H
Sbjct:   558 FSNASDRAKHQNRTH---SNEKPYICKAPGCTKRYTDPSSLRKHVKTVH 603

GO:0007367 "segment polarity determination" evidence=IMP

GO:0035224 "genital disc anterior/posterior pattern formation" evidence=IEP

GO:0060914 "heart formation" evidence=IMP

GO:0007224 "smoothened signaling pathway" evidence=IEP;NAS;IMP;TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0048477 "oogenesis" evidence=IEP

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IMP;IDA;TAS

GO:0043234 "protein complex" evidence=IPI

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS;TAS

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0005515 "protein binding" evidence=IPI

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IGI

GO:0030707 "ovarian follicle cell development" evidence=TAS

GO:0035301 "Hedgehog signaling complex" evidence=IPI

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0007350 "blastoderm segmentation" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0035217 "labial disc development" evidence=IMP

GO:0048100 "wing disc anterior/posterior pattern formation" evidence=IMP

GO:0045750 "positive regulation of S phase of mitotic cell cycle" evidence=IMP

GO:0035277 "spiracle morphogenesis, open tracheal system" evidence=IMP

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0008544 "epidermis development" evidence=IMP

GO:0048592 "eye morphogenesis" evidence=IMP

GO:0030858 "positive regulation of epithelial cell differentiation" evidence=IMP

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

UNIPROTKB|F1NX64 ZIC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 146 (56.5 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 35/107 (32%), Positives = 54/107 (50%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVPR-YAT 63
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK       R +A 
Sbjct:   142 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCGCDRPFAN 201

Query:    64 PPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
               +R     K  + V+   +S++PY C   GC+K+Y H   L+ H+K
Sbjct:   202 SSDR-----KKHSHVH---TSDKPYNCKVRGCDKSYTHPSSLRKHMK 240

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q8N9L1 ZIC4 "Zinc finger protein ZIC 4" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVP----R 60
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK    E      R
Sbjct:   185 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERR 244

Query:    61 YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
             +A   +R     K  + V+   +S++PY C   GC+K Y H   L+ H+K
Sbjct:   245 FANSSDR-----KKHSHVH---TSDKPYTCKVRGCDKCYTHPSSLRKHMK 286

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISS

GO:0003677 "DNA binding" evidence=ISS

UNIPROTKB|E1BAQ8 ZIC4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVP----R 60
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK    E      R
Sbjct:   185 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERR 244

Query:    61 YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
             +A   +R     K  + V+   +S++PY C   GC+K Y H   L+ H+K
Sbjct:   245 FANSSDR-----KKHSHVH---TSDKPYTCKVRGCDKCYTHPSSLRKHMK 286

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PIU4 ZIC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 148 (57.2 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVP----R 60
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK    E      R
Sbjct:   185 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFQGCERR 244

Query:    61 YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
             +A   +R     K  + V+   +S++PY C   GC+K Y H   L+ H+K
Sbjct:   245 FANSSDR-----KKHSHVH---TSDKPYTCKVRGCDKCYTHPSSLRKHMK 286

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1SKC8 ZIC4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 148 (57.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query:     6 FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVP----R 60
             F   + L +H++ H+ E    CP+P CGK +A    LK H  +H  EK    E      R
Sbjct:   221 FKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERR 280

Query:    61 YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
             +A   +R     K  + V+   +S++PY C   GC+K Y H   L+ H+K
Sbjct:   281 FANSSDR-----KKHSHVH---TSDKPYTCKVRGCDKCYTHPSSLRKHMK 322

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	232
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.001

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 85  ERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENATTN 128
            +PY CP EGC K Y ++  LK H+   H      EN      N
Sbjct: 347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMN 390

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	232
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.91
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.88
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.78
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.71
KOG3576	267	consensus Ovo and related transcription factors [T	99.65
KOG3576	267	consensus Ovo and related transcription factors [T	99.62
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.53
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.47
KOG3608	467	consensus Zn finger proteins [General function pre	99.37
KOG3608	467	consensus Zn finger proteins [General function pre	99.35
PHA00733	128	hypothetical protein	99.07
PLN03086	567	PRLI-interacting factor K; Provisional	99.0
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.88
PHA02768	55	hypothetical protein; Provisional	98.86
PHA02768	55	hypothetical protein; Provisional	98.7
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.64
PLN03086	567	PRLI-interacting factor K; Provisional	98.61
KOG3993	500	consensus Transcription factor (contains Zn finger	98.58
KOG3993	500	consensus Transcription factor (contains Zn finger	98.49
PHA00616	44	hypothetical protein	98.32
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.31
PHA00732	79	hypothetical protein	98.2
PHA00733	128	hypothetical protein	98.12
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.07
PHA00616	44	hypothetical protein	97.91
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.8
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.75
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.73
PHA00732	79	hypothetical protein	97.61
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.58
COG5048	467	FOG: Zn-finger [General function prediction only]	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.43
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.43
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	97.39
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.18
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.13
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.03
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.8
smart00355	26	ZnF_C2H2 zinc finger.	96.71
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.65
smart00355	26	ZnF_C2H2 zinc finger.	96.58
KOG4377	480	consensus Zn-finger protein [General function pred	96.56
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.52
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	95.99
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	95.92
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.92
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.84
PRK04860	160	hypothetical protein; Provisional	95.73
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.65
COG5048	467	FOG: Zn-finger [General function prediction only]	95.01
KOG1146	1406	consensus Homeobox protein [General function predi	94.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.83
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	94.81
COG5189	423	SFP1 Putative transcriptional repressor regulating	94.15
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.15
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.29
COG4049	65	Uncharacterized protein containing archaeal-type C	93.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.04
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.82
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.3
KOG4124	442	consensus Putative transcriptional repressor regul	91.16
KOG1146	1406	consensus Homeobox protein [General function predi	90.95
KOG2893	341	consensus Zn finger protein [General function pred	89.27
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	88.77
KOG2893	341	consensus Zn finger protein [General function pred	88.48
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	88.3
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	88.14
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	87.23
COG5236	493	Uncharacterized conserved protein, contains RING Z	84.96
PF02724	622	CDC45: CDC45-like protein; InterPro: IPR003874 CDC	84.45
PF07800	162	DUF1644: Protein of unknown function (DUF1644); In	84.3
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	84.11
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	82.64
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	82.45
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	81.59

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.91  E-value=1.3e-25  Score=174.30  Aligned_cols=100  Identities=19%  Similarity=0.304  Sum_probs=76.9

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|+|+|..-..|+.|+++|+  -+++|.+  |||+|.+..-|+.|+|+|||+|||.|     ..|+|.|--+++|+.||+
T Consensus       166 ~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C-----~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  166 YCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSC-----PHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             CCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccC-----CcccchhcchHHHHHHHH
Confidence            57777777777777777776  5677765  77777777777777777777777777     677777777777877887


Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHh
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      +|.+.|+|.|..  |+|+|...+.|.+|...
T Consensus       237 THS~~K~~qC~~--C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  237 THSDVKKHQCPR--CGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcCCccccCcc--hhhHHHHHHHHHHhhhh
Confidence            777777777776  77777777777777654

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.88  E-value=4.1e-23  Score=160.51  Aligned_cols=104  Identities=28%  Similarity=0.476  Sum_probs=95.2

Q ss_pred             ccccCCChHHHHHHHHHhcC---CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQ---ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGV   78 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~---~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H   78 (232)
                      |||.+.+.++|.+|.++|..   .+.|.|.+  |+|.|.+...|+.|+|+|+  -|+.|     .+|||.|.+.=.|..|
T Consensus       136 Cgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C-----~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  136 CGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCEC-----GICGKAFSRPWLLQGH  206 (279)
T ss_pred             cccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCccc-----ccccccccchHHhhcc
Confidence            99999999999999999964   67899986  9999999999999999997  45555     8999999999999999


Q ss_pred             cccCCCCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           79 YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        79 ~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      +|+|+|+|||.|..  |+|+|+.++||+.||++ |...+
T Consensus       207 iRTHTGEKPF~C~h--C~kAFADRSNLRAHmQT-HS~~K  242 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPH--CGKAFADRSNLRAHMQT-HSDVK  242 (279)
T ss_pred             cccccCCCCccCCc--ccchhcchHHHHHHHHh-hcCCc
Confidence            99999999999988  99999999999999999 55544

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.78  E-value=2.5e-20  Score=162.98  Aligned_cols=49  Identities=33%  Similarity=0.594  Sum_probs=47.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      ||.|+|...+.|..|+|.|+|+|||+|.+  ||.+|.++.+|+.|...|+.
T Consensus       358 ~CakvfgS~SaLqiHlRSHTGERPfqCnv--CG~~FSTkGNLKvH~~rH~e  406 (958)
T KOG1074|consen  358 FCAKVFGSDSALQIHLRSHTGERPFQCNV--CGNRFSTKGNLKVHFQRHRE  406 (958)
T ss_pred             hhHhhcCchhhhhhhhhccCCCCCeeecc--cccccccccceeeeeeeccc
Confidence            79999999999999999999999999987  99999999999999998875

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.71  E-value=4.4e-18  Score=149.10  Aligned_cols=55  Identities=15%  Similarity=0.272  Sum_probs=50.2

Q ss_pred             cCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           60 RYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        60 ~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .+|..|++.|.....|..|+++|+|+|||.|.+  |++.|+.+.+|+.||.+|+-..
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~f--C~~aFttrgnLKvHMgtH~w~q  934 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHF--CEEAFTTRGNLKVHMGTHMWVQ  934 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchh--hhhhhhhhhhhhhhhccccccC
Confidence            566889999999999999999999999999999  9999999999999999855443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.65  E-value=1.6e-17  Score=123.63  Aligned_cols=107  Identities=24%  Similarity=0.382  Sum_probs=83.4

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|+|.|..+.-|.+|++.|...|.|-|.+  |||.|...-.|++|+|+|+|.+||+|     ..|+|.|.++-.|..|++
T Consensus       122 vCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc-----~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  122 VCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKC-----SLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             hhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccch-----hhhhHHHHhhccHHHHHH
Confidence            48888888888888888888888888876  88888888888888888888888887     778888888888888765


Q ss_pred             c-CC----------CCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           81 S-AS----------SERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        81 ~-H~----------~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      . |.          ..|.|.|..  ||.+-.+...+..|++.+|...
T Consensus       195 kvhgv~~~yaykerr~kl~vced--cg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCED--CGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecc--cCCCCCChhHHHHHHHhcCCCC
Confidence            3 32          346788854  8887777777788888777653

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.62  E-value=6.3e-17  Score=120.48  Aligned_cols=88  Identities=24%  Similarity=0.427  Sum_probs=81.5

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccccc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYI  100 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~  100 (232)
                      +...|.|.+  |+|+|..+..|.+|++.|...|.|.|     +.|||-|...-.|++|+|+|+|.+||+|..  |+|+|+
T Consensus       114 d~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lc-----t~cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaft  184 (267)
T KOG3576|consen  114 DQDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLC-----TFCGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFT  184 (267)
T ss_pred             CCCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHH-----hhccCcccchhhhhhhhccccCccccchhh--hhHHHH
Confidence            345699997  99999999999999999999888888     899999999999999999999999999988  999999


Q ss_pred             ChHHHHHHHHhhCCCCC
Q 026846          101 HEYKLKLHLKREHPGHM  117 (232)
Q Consensus       101 ~~~~l~~H~~~~h~~~~  117 (232)
                      ++..|..|++..|+...
T Consensus       185 qrcsleshl~kvhgv~~  201 (267)
T KOG3576|consen  185 QRCSLESHLKKVHGVQH  201 (267)
T ss_pred             hhccHHHHHHHHcCchH
Confidence            99999999999887643

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.53  E-value=3.8e-15  Score=129.14  Aligned_cols=107  Identities=21%  Similarity=0.336  Sum_probs=90.2

Q ss_pred             CccccCCChHHHHHHHH-Hhc-CCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC-------ccC-CcCCCCCccccC
Q 026846            1 MKAVAFSLDFNLRSHMK-THS-QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA-------VEV-PRYATPPERITK   70 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~-~H~-~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-------~c~-~~~~~~c~~~~~   70 (232)
                      ||.+.+.+...|+.|++ +|. .+-.|.|.+  |.++|.++..|.+||.+|.....-       .|. ..+|+-|+|.|+
T Consensus       215 ycdrgykrltslkeHikyrhekne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFK  292 (1007)
T KOG3623|consen  215 YCDRGYKRLTSLKEHIKYRHEKNEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFK  292 (1007)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhh
Confidence            68888888999999987 453 566799975  999999999999999999632221       122 345599999999


Q ss_pred             CCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHh
Q 026846           71 TPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        71 ~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      -+.+|+-|+|+|.|+|||.|..  |+|.|..++.+..||-.
T Consensus       293 fKHHLKEHlRIHSGEKPfeCpn--CkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  293 FKHHLKEHLRIHSGEKPFECPN--CKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hHHHHHhhheeecCCCCcCCcc--cccccccCCcccccccc
Confidence            9999999999999999999976  99999999999999854

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.47  E-value=6.8e-15  Score=127.60  Aligned_cols=87  Identities=18%  Similarity=0.301  Sum_probs=79.1

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccccc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYI  100 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~  100 (232)
                      ..-+|.|..  |.|.|...+.|.+|..-|+|++||+|     .+|.|.|+.+.+|.-|+|+|.|+|||.|.-  |+|.|.
T Consensus       891 e~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC-----~iCkKAFKHKHHLtEHkRLHSGEKPfQCdK--ClKRFS  961 (1007)
T KOG3623|consen  891 EDGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQC-----IICKKAFKHKHHLTEHKRLHSGEKPFQCDK--CLKRFS  961 (1007)
T ss_pred             ccccchHHH--HHHHHHhhHHHHHhhhhhcCCCCccc-----chhhHhhhhhhhhhhhhhhccCCCcchhhh--hhhhcc
Confidence            355799975  99999999999999999999999999     899999999999999999999999999977  999999


Q ss_pred             ChHHHHHHHHhhCCCCCC
Q 026846          101 HEYKLKLHLKREHPGHMS  118 (232)
Q Consensus       101 ~~~~l~~H~~~~h~~~~~  118 (232)
                      .++....||.  |.....
T Consensus       962 HSGSYSQHMN--HRYSYC  977 (1007)
T KOG3623|consen  962 HSGSYSQHMN--HRYSYC  977 (1007)
T ss_pred             cccchHhhhc--cchhcc
Confidence            9999999985  666553

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.37  E-value=3.1e-13  Score=108.71  Aligned_cols=107  Identities=21%  Similarity=0.393  Sum_probs=79.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhc--CCCCCcc---------------------
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH--EKNAAVE---------------------   57 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~c---------------------   57 (232)
                      .|-+.|..++.|+.|+++|+++|...|+  .||.-|..+..|..|++..+  ...+|+|                     
T Consensus       184 ~Ct~~~~~k~~LreH~r~Hs~eKvvACp--~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv  261 (467)
T KOG3608|consen  184 MCTKHMGNKYRLREHIRTHSNEKVVACP--HCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV  261 (467)
T ss_pred             hhhhhhccHHHHHHHHHhcCCCeEEecc--hHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh
Confidence            3778899999999999999999998885  48888888888888887755  3455654                     


Q ss_pred             CCcCCCCCccccCCCCCccccccc-CCCCCCccCCcccccccccChHHHHHHHHh
Q 026846           58 VPRYATPPERITKTPKPPAGVYGS-ASSERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        58 ~~~~~~~c~~~~~~~~~l~~H~~~-H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      ..+.|++|.-....++-|.+|++. |...|||+|.-  |.+.|.+.+.|.+|..+
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQV  314 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHHh
Confidence            235667777777777777777764 77777777754  77777666666666654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.35  E-value=3.4e-13  Score=108.44  Aligned_cols=115  Identities=19%  Similarity=0.310  Sum_probs=77.2

Q ss_pred             CccccCCChHHHHHHHHH-hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccc
Q 026846            1 MKAVAFSLDFNLRSHMKT-HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVY   79 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~   79 (232)
                      +|.......+.|..||+. |+..|||+|.  .|.++|...+.|.+|+..|. +..|.|-.   +.|...|+....+++|+
T Consensus       268 lCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~HS-~~~y~C~h---~~C~~s~r~~~q~~~H~  341 (467)
T KOG3608|consen  268 LCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQVHS-KTVYQCEH---PDCHYSVRTYTQMRRHF  341 (467)
T ss_pred             ccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHhcc-ccceecCC---CCCcHHHHHHHHHHHHH
Confidence            356666666777777663 6667777775  47777777777777777665 44455522   44666777777777777


Q ss_pred             ccCC-C--CCCccCCcccccccccChHHHHHHHHhhCCCCCCCcccc
Q 026846           80 GSAS-S--ERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAE  123 (232)
Q Consensus        80 ~~H~-~--~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~~~~~~  123 (232)
                      +-|. |  ..+|.|..  |.+.|++..+|..|+++.|....|..-..
T Consensus       342 ~evhEg~np~~Y~CH~--Cdr~ft~G~~L~~HL~kkH~f~~PsGh~R  386 (467)
T KOG3608|consen  342 LEVHEGNNPILYACHC--CDRFFTSGKSLSAHLMKKHGFRLPSGHKR  386 (467)
T ss_pred             HHhccCCCCCceeeec--chhhhccchhHHHHHHHhhcccCCCCCCc
Confidence            7543 4  34688877  88888888888888887787766554433

>PHA00733 hypothetical protein

Probab=99.07  E-value=1.6e-10  Score=82.76  Aligned_cols=83  Identities=12%  Similarity=0.041  Sum_probs=54.6

Q ss_pred             CCcccCCCCCCCccccchhhHHHH--HHH---hcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNH--IAS---HHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCE   96 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H--~~~---h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~   96 (232)
                      .+++.|.+  |.+.|.....|..|  ++.   +.+.+||.|     ..|++.|.....|..|++.|  ..+|.|..  |+
T Consensus        38 ~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C-----~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~--Cg  106 (128)
T PHA00733         38 QKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVC-----PLCLMPFSSSVSLKQHIRYT--EHSKVCPV--CG  106 (128)
T ss_pred             hhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccC-----CCCCCcCCCHHHHHHHHhcC--CcCccCCC--CC
Confidence            44566654  66555555444443  111   223455555     55666666666666666655  35799987  99


Q ss_pred             ccccChHHHHHHHHhhCCC
Q 026846           97 KAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        97 k~f~~~~~l~~H~~~~h~~  115 (232)
                      +.|.....|..|+...|+-
T Consensus       107 K~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        107 KEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CccCCHHHHHHHHHHhcCc
Confidence            9999999999999988864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.00  E-value=5.4e-10  Score=97.47  Aligned_cols=98  Identities=17%  Similarity=0.257  Sum_probs=73.7

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCC---------
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKT---------   71 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~---------   71 (232)
                      +|++.|. ...|..|+++|+  +|+.|+   |++.| .+..|..|+++|.+.+|+.|     ..|++.|..         
T Consensus       458 ~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C-----~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        458 KCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITC-----RFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             CCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeC-----CCCCCccccCccccchhh
Confidence            5888885 577888888874  788884   88655 56888888888888888888     567777741         


Q ss_pred             -CCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           72 -PKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        72 -~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                       ...|..|..++ |.+++.|..  ||+.|..+ .|..|+...|.
T Consensus       526 ~~s~Lt~HE~~C-G~rt~~C~~--Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        526 RLRGMSEHESIC-GSRTAPCDS--CGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhHHHHHHhc-CCcceEccc--cCCeeeeh-hHHHHHHHhhc
Confidence             23677887775 888888876  88877765 57788777664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.88  E-value=1.2e-09  Score=55.69  Aligned_cols=26  Identities=54%  Similarity=1.110  Sum_probs=23.5

Q ss_pred             HHHHHHHHhcCCCcccCCCCCCCccccc
Q 026846           11 NLRSHMKTHSQENYHICPYPDCGKRYAH   38 (232)
Q Consensus        11 ~L~~H~~~H~~~~p~~C~~~~C~~~f~~   38 (232)
                      +|.+||++|+|++||+|.+  |+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            5899999999999999975  9999974

...

>PHA02768 hypothetical protein; Provisional

Probab=98.86  E-value=1.2e-09  Score=65.06  Aligned_cols=43  Identities=19%  Similarity=0.429  Sum_probs=36.3

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~  103 (232)
                      -|.|.  .||+.|.+..+|.+|+++|+                                   ++|+|..  |++.|.+.+
T Consensus         5 ~y~C~--~CGK~Fs~~~~L~~H~r~H~-----------------------------------k~~kc~~--C~k~f~~~s   45 (55)
T PHA02768          5 GYECP--ICGEIYIKRKSMITHLRKHN-----------------------------------TNLKLSN--CKRISLRTG   45 (55)
T ss_pred             ccCcc--hhCCeeccHHHHHHHHHhcC-----------------------------------CcccCCc--ccceecccc
Confidence            48996  59999999999999999993                                   5788865  999998776


Q ss_pred             HH
Q 026846          104 KL  105 (232)
Q Consensus       104 ~l  105 (232)
                      .|
T Consensus        46 ~l   47 (55)
T PHA02768         46 EY   47 (55)
T ss_pred             ee
Confidence            65

>PHA02768 hypothetical protein; Provisional

Probab=98.70  E-value=8.1e-09  Score=61.52  Aligned_cols=39  Identities=8%  Similarity=0.137  Sum_probs=35.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHH
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLK   43 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~   43 (232)
                      .||+.|.+.++|..|+++|+  +||+|.  .|++.|.+++.|.
T Consensus        10 ~CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l~   48 (55)
T PHA02768         10 ICGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEYI   48 (55)
T ss_pred             hhCCeeccHHHHHHHHHhcC--CcccCC--cccceecccceeE
Confidence            59999999999999999999  799996  6999999887664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.64  E-value=2.9e-09  Score=54.26  Aligned_cols=23  Identities=35%  Similarity=0.957  Sum_probs=17.2

Q ss_pred             cccccCCCCCCccCCcccccccccC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      .|+++|+|+|||.|.+  |+++|.+
T Consensus         4 ~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHSSSSSEEESS--SSEEESS
T ss_pred             HHhhhcCCCCCCCCCC--CcCeeCc
Confidence            3444446789999988  9999974

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.61  E-value=2.6e-08  Score=87.09  Aligned_cols=76  Identities=14%  Similarity=0.220  Sum_probs=63.4

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC-
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH-  101 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~-  101 (232)
                      +++.|.+  |++.|. ...|..|+++|+  +|+.|     + |++.+ .+..|..|+.+|...+|+.|.+  |++.|.. 
T Consensus       452 ~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~C-----p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g  517 (567)
T PLN03086        452 NHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQC-----P-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAG  517 (567)
T ss_pred             cCccCCC--CCCccc-hHHHHHHHHhcC--CCccC-----C-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccC
Confidence            4578975  999996 688999999985  78888     4 88654 6789999999999999999998  9999952 


Q ss_pred             ---------hHHHHHHHHhh
Q 026846          102 ---------EYKLKLHLKRE  112 (232)
Q Consensus       102 ---------~~~l~~H~~~~  112 (232)
                               ...|..|....
T Consensus       518 ~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        518 GSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             ccccchhhhhhhHHHHHHhc
Confidence                     45799998774

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.58  E-value=4.8e-08  Score=80.90  Aligned_cols=112  Identities=19%  Similarity=0.309  Sum_probs=69.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccc-c
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGV-Y   79 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H-~   79 (232)
                      +|...|.....|.+|...-...--|+|.  +|+|.|+...||..|+|.|-.+..-.....   .-.+.-.....+..- .
T Consensus       272 LCK~kYeD~F~LAQHrC~RIV~vEYrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~---~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  272 LCKEKYEDAFALAQHRCPRIVHVEYRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGS---PPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHhhhhHHHHhhccCCeeEEeeecCC--cccccccCchhhhhhhcccCCchhhhhcCC---CChhhhhhhhhhhhhcc
Confidence            4777788888899997644444569994  799999999999999998853321110000   000000000000000 0


Q ss_pred             cc--CCCCCCccCCcccccccccChHHHHHHHHhhCCCCCCC
Q 026846           80 GS--ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSD  119 (232)
Q Consensus        80 ~~--H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~~  119 (232)
                      |.  -....-|.|..  |+|.|.+...|++|+-+||......
T Consensus       347 rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             ccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhccccch
Confidence            00  01234799998  9999999999999999988765544

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.49  E-value=1.1e-07  Score=78.75  Aligned_cols=113  Identities=20%  Similarity=0.368  Sum_probs=81.0

Q ss_pred             CccccCCChHHHHHHHHHhcC--------CC-------------------------cccCCCCCCCccccchhhHHHHHH
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQ--------EN-------------------------YHICPYPDCGKRYAHEYKLKNHIA   47 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~--------~~-------------------------p~~C~~~~C~~~f~~~~~l~~H~~   47 (232)
                      -|+|+|....+|..|.|+|..        ..                         .|.|.+  |+|.|.++..|+.|+.
T Consensus       300 EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHql  377 (500)
T KOG3993|consen  300 ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQL  377 (500)
T ss_pred             cccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH--hhhhhHHHHHHHHhHH
Confidence            399999999999999999962        22                         289986  9999999999999999


Q ss_pred             HhcCCCC--------Cc---------c------------------------CCcCCCCCccccCCCCCcccccccCCCCC
Q 026846           48 SHHEKNA--------AV---------E------------------------VPRYATPPERITKTPKPPAGVYGSASSER   86 (232)
Q Consensus        48 ~h~~~~~--------~~---------c------------------------~~~~~~~c~~~~~~~~~l~~H~~~H~~~k   86 (232)
                      +|+....        +.         +                        ..-....++-.+..+..--.|.+.-....
T Consensus       378 thq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q  457 (500)
T KOG3993|consen  378 THQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQ  457 (500)
T ss_pred             hhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhh
Confidence            9873211        10         0                        00111334444444444444554444566


Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      .|.|.+  |.-+|..+.+|.+|+...|..+.
T Consensus       458 ~f~~ky--~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  458 GFTCKY--CPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             cccccc--chHhhhcCcchHhHhhhcChHHh
Confidence            799999  99999999999999998887654

>PHA00616 hypothetical protein

Probab=98.32  E-value=2.9e-07  Score=52.22  Aligned_cols=32  Identities=22%  Similarity=0.429  Sum_probs=27.2

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      ||+|.  .||+.|.++..|.+|++.|+|.+++.|
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68995  699999999999999999987666544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.31  E-value=3.3e-07  Score=73.36  Aligned_cols=73  Identities=27%  Similarity=0.544  Sum_probs=50.5

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHH-hcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIAS-HHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAY   99 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f   99 (232)
                      ++|||+|+++.|.|+|+.+-.|+-|+.. |...+...-   -.+.--..|            -...|||.|.+  |+|.|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~---p~p~~~~~F------------~~~~KPYrCev--C~KRY  408 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHEN---PSPEKMNIF------------SAKDKPYRCEV--CDKRY  408 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCC---CCccccccc------------cccCCceeccc--cchhh
Confidence            3599999999999999999999999874 211111000   001111112            12469999988  99999


Q ss_pred             cChHHHHHHHH
Q 026846          100 IHEYKLKLHLK  110 (232)
Q Consensus       100 ~~~~~l~~H~~  110 (232)
                      ...-.|+.|++
T Consensus       409 KNlNGLKYHr~  419 (423)
T COG5189         409 KNLNGLKYHRK  419 (423)
T ss_pred             ccCccceeccc
Confidence            99999999953

>PHA00732 hypothetical protein

Probab=98.20  E-value=1.1e-06  Score=57.33  Aligned_cols=24  Identities=33%  Similarity=0.676  Sum_probs=21.3

Q ss_pred             cccCCCCCCCccccchhhHHHHHHH-h
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIAS-H   49 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~-h   49 (232)
                      ||.|..  |++.|.+..+|..|++. |
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H   25 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNH   25 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhccc
Confidence            689975  99999999999999985 5

>PHA00733 hypothetical protein

Probab=98.12  E-value=3.8e-06  Score=60.23  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=57.0

Q ss_pred             ccccCCChHHHHHH--HH---HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcc
Q 026846            2 KAVAFSLDFNLRSH--MK---THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPA   76 (232)
Q Consensus         2 C~~~f~~~~~L~~H--~~---~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~   76 (232)
                      |.+.|.....|..|  ++   .+.+.+||.|..  |++.|.+...|..|++.|.  .+|.|     ..|++.|.....|.
T Consensus        46 ~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h~--~~~~C-----~~CgK~F~~~~sL~  116 (128)
T PHA00733         46 VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYTE--HSKVC-----PVCGKEFRNTDSTL  116 (128)
T ss_pred             HhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcCC--cCccC-----CCCCCccCCHHHHH
Confidence            56666666555444  11   234588999974  9999999999999999763  46666     89999999999999


Q ss_pred             cccccCCC
Q 026846           77 GVYGSASS   84 (232)
Q Consensus        77 ~H~~~H~~   84 (232)
                      .|++...+
T Consensus       117 ~H~~~~h~  124 (128)
T PHA00733        117 DHVCKKHN  124 (128)
T ss_pred             HHHHHhcC
Confidence            99876543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.07  E-value=8.8e-06  Score=49.19  Aligned_cols=53  Identities=34%  Similarity=0.646  Sum_probs=40.8

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~  103 (232)
                      .|.|+|  |++ ..+...|..|+...+.                               ...+.+.|++  |...+.  .
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~-------------------------------~~~~~v~CPi--C~~~~~--~   43 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHR-------------------------------SESKNVVCPI--CSSRVT--D   43 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCc-------------------------------CCCCCccCCC--chhhhh--h
Confidence            489988  999 4556889999887642                               1245799988  998655  4


Q ss_pred             HHHHHHHhhCC
Q 026846          104 KLKLHLKREHP  114 (232)
Q Consensus       104 ~l~~H~~~~h~  114 (232)
                      +|..|++.+|+
T Consensus        44 ~l~~Hl~~~H~   54 (54)
T PF05605_consen   44 NLIRHLNSQHR   54 (54)
T ss_pred             HHHHHHHHhcC
Confidence            89999998774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=97.91  E-value=5.8e-06  Score=46.95  Aligned_cols=27  Identities=22%  Similarity=0.397  Sum_probs=24.5

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      ||.|..  ||+.|...+.|.+|+++||+.
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~   27 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQ   27 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCC
Confidence            689977  999999999999999997765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.80  E-value=1.4e-05  Score=39.16  Aligned_cols=23  Identities=39%  Similarity=0.905  Sum_probs=20.2

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |+|.+  |++.|.++..|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            68864  999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.75  E-value=1.9e-05  Score=38.74  Aligned_cols=22  Identities=41%  Similarity=0.987  Sum_probs=20.4

Q ss_pred             ccCCcccccccccChHHHHHHHHh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      |.|..  |++.|.+...|..|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            67977  99999999999999987

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.73  E-value=2.6e-05  Score=38.42  Aligned_cols=24  Identities=29%  Similarity=0.890  Sum_probs=20.3

Q ss_pred             ccCCcccccccccChHHHHHHHHhhC
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |.|.+  |++.|.+...|..|++++|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            68988  9999999999999999876

...

>PHA00732 hypothetical protein

Probab=97.61  E-value=4.1e-05  Score=49.92  Aligned_cols=42  Identities=29%  Similarity=0.581  Sum_probs=35.0

Q ss_pred             CccccCCChHHHHHHHHH-hcCCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846            1 MKAVAFSLDFNLRSHMKT-HSQENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      +|++.|.....|..|++. |.   ++.|..  |+++|.   .|..|++++.
T Consensus         6 ~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~--CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          6 ICGFTTVTLFALKQHARRNHT---LTKCPV--CNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CCCCccCCHHHHHHHhhcccC---CCccCC--CCCEeC---ChhhhhcccC
Confidence            599999999999999985 65   468974  999998   4888887653

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.58  E-value=3.9e-05  Score=39.20  Aligned_cols=26  Identities=23%  Similarity=0.553  Sum_probs=23.2

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      ||.|..  |++.|.....|..|++.|+.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhcC
Confidence            689987  99999999999999988654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=97.49  E-value=2.7e-05  Score=66.97  Aligned_cols=115  Identities=29%  Similarity=0.381  Sum_probs=91.4

Q ss_pred             CccccCCChHHHHHHHH--HhcCC--CcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCC-----------------
Q 026846            1 MKAVAFSLDFNLRSHMK--THSQE--NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVP-----------------   59 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~--~H~~~--~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~-----------------   59 (232)
                      .|...|.....|.+|.+  .|+++  +|+.|.+..|++.|.+...+.+|..+|++..++.+..                 
T Consensus       294 ~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (467)
T COG5048         294 QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQ  373 (467)
T ss_pred             cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCcc
Confidence            47889999999999999  89999  9999984459999999999999999999877664311                 


Q ss_pred             ---------------cCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           60 ---------------RYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        60 ---------------~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                                     .....|...+.....+..|...|...+++.|....|.+.|.....+..|++.+...
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (467)
T COG5048         374 SLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNH  444 (467)
T ss_pred             chhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccC
Confidence                           11133556677777788888888888876666667999999999999998774443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.43  E-value=0.00011  Score=36.04  Aligned_cols=24  Identities=38%  Similarity=0.987  Sum_probs=19.3

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |.|.+  |++.|.+...|..|++.|+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            68976  9999999999999999873

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.43  E-value=9.3e-05  Score=50.44  Aligned_cols=73  Identities=18%  Similarity=0.491  Sum_probs=21.8

Q ss_pred             cCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHH
Q 026846           26 ICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKL  105 (232)
Q Consensus        26 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l  105 (232)
                      .|.+  |+..|.....|..|+...++...-         ....+.....+..+++.. -...+.|.+  |++.|.....|
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~~---------~~~~l~~~~~~~~~~~~~-~~~~~~C~~--C~~~f~s~~~l   66 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDIP---------DQKYLVDPNRLLNYLRKK-VKESFRCPY--CNKTFRSREAL   66 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSS--SS-EESSHHHH
T ss_pred             Cccc--cccccccccccccccccccccccc---------cccccccccccccccccc-cCCCCCCCc--cCCCCcCHHHH
Confidence            3665  888888888888888765432110         000111111111222111 123799988  99999999999


Q ss_pred             HHHHHhh
Q 026846          106 KLHLKRE  112 (232)
Q Consensus       106 ~~H~~~~  112 (232)
                      ..|++.+
T Consensus        67 ~~Hm~~~   73 (100)
T PF12756_consen   67 QEHMRSK   73 (100)
T ss_dssp             HHHHHHT
T ss_pred             HHHHcCc
Confidence            9999975

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=97.39  E-value=0.00071  Score=53.15  Aligned_cols=27  Identities=22%  Similarity=0.418  Sum_probs=15.1

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHH
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIAS   48 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~   48 (232)
                      .+|-|.|+|.|  |.. |.-...--.|+..
T Consensus       137 ~hGGrif~Csf--C~~-flCEDDQFEHQAs  163 (314)
T PF06524_consen  137 DHGGRIFKCSF--CDN-FLCEDDQFEHQAS  163 (314)
T ss_pred             cCCCeEEEeec--CCC-eeeccchhhhhhh
Confidence            34667788876  764 3334444445544

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.18  E-value=0.0008  Score=40.54  Aligned_cols=45  Identities=27%  Similarity=0.471  Sum_probs=34.9

Q ss_pred             CccccCCChHHHHHHHHH-hcCC-CcccCCCCCCCccccchhhHHHHHHHhc
Q 026846            1 MKAVAFSLDFNLRSHMKT-HSQE-NYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H~~~-~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ||++. .....|..|... |..+ +.+.|++  |...+.  .+|.+|++.++
T Consensus         7 ~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    7 YCGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            79994 556789999774 7654 5799976  998755  49999998864

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.13  E-value=0.00025  Score=36.10  Aligned_cols=25  Identities=32%  Similarity=0.561  Sum_probs=22.4

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhc
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ||.|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            689975  9999999999999999874

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.03  E-value=0.00063  Score=39.57  Aligned_cols=40  Identities=25%  Similarity=0.476  Sum_probs=24.6

Q ss_pred             HHHHHH-hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           13 RSHMKT-HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        13 ~~H~~~-H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      ..+.+. +..+.|..|++  |+..+.+..+|++|+.++++.||
T Consensus        12 ~~~~k~~~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            344443 34678999975  99999999999999999887665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.80  E-value=0.0018  Score=37.72  Aligned_cols=31  Identities=32%  Similarity=0.585  Sum_probs=22.6

Q ss_pred             CCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           83 SSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        83 ~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      ..+.|-.|+.  |+..+.+..+|++|+..+|..
T Consensus        20 ~S~~PatCP~--C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   20 QSEQPATCPI--CGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TTS--EE-TT--T--EESSHHHHHHHHHHHTTT
T ss_pred             ccCCCCCCCc--chhhccchhhHHHHHHHHhcc
Confidence            3578999987  999999999999999988864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.71  E-value=0.0015  Score=32.33  Aligned_cols=24  Identities=38%  Similarity=0.794  Sum_probs=20.9

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |.|.+  |++.|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            57865  9999999999999999774

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.65  E-value=0.0013  Score=44.67  Aligned_cols=47  Identities=32%  Similarity=0.548  Sum_probs=19.2

Q ss_pred             CccccCCChHHHHHHHHH-hcC----------------------CCcccCCCCCCCccccchhhHHHHHHHh
Q 026846            1 MKAVAFSLDFNLRSHMKT-HSQ----------------------ENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H~~----------------------~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      +|+..|.....|..||.. |.-                      ...+.|.+  |++.|.+...|..||+.+
T Consensus         4 ~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    4 FCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------SSEEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccCCCCCCCc--cCCCCcCHHHHHHHHcCc
Confidence            589999999999999864 431                      12478876  998898888899998875

>smart00355 ZnF_C2H2 zinc finger

Probab=96.58  E-value=0.0019  Score=31.96  Aligned_cols=22  Identities=36%  Similarity=0.833  Sum_probs=19.8

Q ss_pred             ccCCcccccccccChHHHHHHHHh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      |.|..  |+++|.....|..|++.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHH
Confidence            57877  99999999999999985

>KOG4377 consensus Zn-finger protein [General function prediction only]

Probab=96.56  E-value=0.0054  Score=51.37  Aligned_cols=106  Identities=16%  Similarity=0.176  Sum_probs=71.7

Q ss_pred             CccccCCChHHHHHHHHHhcCC------------CcccCCCCCCCccccchhhHHHHHHHhcCCCCC--------ccCCc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQE------------NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA--------VEVPR   60 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~------------~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~c~~~   60 (232)
                      +|+..+..+..+.+|..+|.-.            ..|-|.+..|.|   +.++...|-..|+. +++        -|.. 
T Consensus       278 ~C~ykr~~k~DvirH~~~hkkrdnsL~dgf~rfs~syhC~~~~C~k---sTsdV~~h~nFht~-~~n~GfrrthfhC~r-  352 (480)
T KOG4377|consen  278 YCFYKRGQKNDVIRHVEIHKKRDNSLIDGFHRFSNSYHCTGQICEK---STSDVLLHDNFHTD-KRNNGFRRTHFHCQR-  352 (480)
T ss_pred             cccccccchhhhHHHHHHHhhcccccccchhhcCccchhhhcccCc---ccccccccCccccc-cccCceecceeEEec-
Confidence            5887777799999999998632            236888888988   55667777777743 333        2322 


Q ss_pred             CCCCCccccCCCCCcccccccCCCC------------------------CCccCCcccccccccChHHHHHHHHhhC
Q 026846           61 YATPPERITKTPKPPAGVYGSASSE------------------------RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        61 ~~~~c~~~~~~~~~l~~H~~~H~~~------------------------k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                        ..|.-.|+...+-..|++-+.++                        .-|.|...||+.+|...++|..|.|.|-
T Consensus       353 --~gCTdtfK~~khk~yh~kdda~~~dGfkkf~k~e~cay~gCkys~~cnhfhc~r~Gc~~tl~s~sqm~shkrkhe  427 (480)
T KOG4377|consen  353 --IGCTDTFKDSKHKPYHYKDDAGEIDGFKKFFKDENCAYTGCKYSGICNHFHCDRLGCEATLYSVSQMASHKRKHE  427 (480)
T ss_pred             --cCCccccccccccccccCcchhhhhhhhhhhccccCCccCcccccceeeeeecccCCceEEEehhhhhhhhhhhh
Confidence              23556666555555555544322                        1355888899999999999999987743

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.52  E-value=0.0017  Score=31.92  Aligned_cols=24  Identities=50%  Similarity=0.948  Sum_probs=19.1

Q ss_pred             ccCCcccccccccChHHHHHHHHhhCC
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      |+|..  |+.+.. ...|.+|++++|+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhCc
Confidence            68987  998888 8899999999874

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.99  E-value=0.0011  Score=50.21  Aligned_cols=86  Identities=17%  Similarity=0.220  Sum_probs=68.7

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc-C---------CCCCCccCC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS-A---------SSERPYACP   91 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~-H---------~~~k~~~C~   91 (232)
                      .+.|.|++..|...|........|-.+-++        ..|..|.+.|.+...|-.|+.- |         .|.-.|.|-
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~--------~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~Cl  148 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHG--------NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCL  148 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhccc--------chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHH
Confidence            356889999999999988877777544332        2347899999999999998652 3         467789999


Q ss_pred             cccccccccChHHHHHHHHhhCCC
Q 026846           92 YEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        92 ~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      ++||+-.|.+....+.|+-..|..
T Consensus       149 vEgCt~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  149 VEGCTEKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             HHhhhhhhhhhhhhhhHHHHhccC
Confidence            999999999999999998877764

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=95.92  E-value=0.0088  Score=47.18  Aligned_cols=18  Identities=28%  Similarity=0.637  Sum_probs=8.6

Q ss_pred             CCccCCcccccccccChHHH
Q 026846           86 RPYACPYEGCEKAYIHEYKL  105 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l  105 (232)
                      +++.|+-  ||.-......|
T Consensus       208 k~~PCPK--Cg~et~eTkdL  225 (314)
T PF06524_consen  208 KPIPCPK--CGYETQETKDL  225 (314)
T ss_pred             CCCCCCC--CCCcccccccc
Confidence            4555544  55444443333

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.92  E-value=0.0073  Score=29.62  Aligned_cols=23  Identities=35%  Similarity=0.713  Sum_probs=17.9

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |+|.+  |..... +..|.+|++.|+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            68975  999988 889999999875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.84  E-value=0.0056  Score=30.32  Aligned_cols=23  Identities=30%  Similarity=0.738  Sum_probs=20.2

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |.|.+  |++.|.+...|..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            67876  999999999999999875

>PRK04860 hypothetical protein; Provisional

Probab=95.73  E-value=0.0059  Score=45.45  Aligned_cols=30  Identities=13%  Similarity=0.256  Sum_probs=23.2

Q ss_pred             CCCCcccccccCCCCCCccCCcccccccccCh
Q 026846           71 TPKPPAGVYGSASSERPYACPYEGCEKAYIHE  102 (232)
Q Consensus        71 ~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~  102 (232)
                      ....+..|.++|+++++|.|..  |+..|...
T Consensus       127 ~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~  156 (160)
T PRK04860        127 HQLTVRRHNRVVRGEAVYRCRR--CGETLVFK  156 (160)
T ss_pred             eeCHHHHHHHHhcCCccEECCC--CCceeEEe
Confidence            4455667777778899999987  99988754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.65  E-value=0.0075  Score=29.83  Aligned_cols=22  Identities=32%  Similarity=0.798  Sum_probs=19.9

Q ss_pred             ccCCcccccccccChHHHHHHHHh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      |.|.+  |++.|.....|..|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            67887  99999999999999875

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.01  E-value=0.016  Score=49.76  Aligned_cols=77  Identities=8%  Similarity=-0.012  Sum_probs=60.9

Q ss_pred             CcccCCCCCCCccccchhhHHHHHH--HhcCC--CCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIA--SHHEK--NAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKA   98 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~--~h~~~--~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~   98 (232)
                      .++.|.  .|...|.....|.+|.+  .|.+.  +|+.|...   .|++.|.....+..|..+|.+.+++.|....|.+.
T Consensus       288 ~~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (467)
T COG5048         288 LPIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS---LCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK  362 (467)
T ss_pred             cCCCCc--cccCCccccccccccccccccccccCCceeeecc---CCCccccccccccCCcccccCCCccccccccCccc
Confidence            467775  48899999999999998  78888  88888433   78888888888888988888888888877667666


Q ss_pred             ccChHH
Q 026846           99 YIHEYK  104 (232)
Q Consensus        99 f~~~~~  104 (232)
                      +.....
T Consensus       363 ~~~~~~  368 (467)
T COG5048         363 FSPLLN  368 (467)
T ss_pred             cccccC
Confidence            665544

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.84  E-value=0.0099  Score=56.81  Aligned_cols=88  Identities=22%  Similarity=0.336  Sum_probs=60.0

Q ss_pred             ccCCChHHHHHHHH-HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC--CCCccCCcCCCCCccccCCCCCcccccc
Q 026846            4 VAFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK--NAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         4 ~~f~~~~~L~~H~~-~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      ..|.++..|.-|+. +|+-.+-|+|+  .|++.|.....|-.|||.-+..  -.|+.                +...|.+
T Consensus       444 ~~~~s~r~~~~~t~~L~S~~kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~~~c~----------------~gq~~~~  505 (1406)
T KOG1146|consen  444 PLLESKRSLEGQTVVLHSFFKTLKCP--KCNWHYKLAQTLGVHMRSKHPESQSAYCK----------------AGQNHPR  505 (1406)
T ss_pred             hhhhhhcccccceeeeecccccccCC--ccchhhhhHHHhhhcccccccccchhHhH----------------hcccccc
Confidence            34444555555554 47777899996  6999999999999999984321  11111                0111111


Q ss_pred             c------CCCCCCccCCcccccccccChHHHHHHHHh
Q 026846           81 S------ASSERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        81 ~------H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      .      -.+.+||.|..  |..+|....+|..|++.
T Consensus       506 ~arg~~~~~~~~p~~C~~--C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  506 LARGEVYRCPGKPYPCRA--CNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccccccCCCCccccee--eeeeeecchHHHHHHHH
Confidence            1      12568999988  99999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.83  E-value=0.01  Score=30.07  Aligned_cols=22  Identities=36%  Similarity=0.771  Sum_probs=19.5

Q ss_pred             ccCCcccccccccChHHHHHHHHh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      |.|..  |++.|.....|..|+++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67877  99999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=94.81  E-value=0.052  Score=37.60  Aligned_cols=17  Identities=29%  Similarity=0.815  Sum_probs=11.5

Q ss_pred             CCCCccCCcccccccccCh
Q 026846           84 SERPYACPYEGCEKAYIHE  102 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~  102 (232)
                      +..|-.|++  ||..|.-.
T Consensus        23 nk~PivCP~--CG~~~~~~   39 (108)
T PF09538_consen   23 NKDPIVCPK--CGTEFPPE   39 (108)
T ss_pred             CCCCccCCC--CCCccCcc
Confidence            346777877  88777654

The function of members of this family is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=94.15  E-value=0.035  Score=45.19  Aligned_cols=30  Identities=43%  Similarity=0.961  Sum_probs=26.4

Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++|||+|++++|.|+|...-.|+.|+.--|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccc
Confidence            469999999999999999999999976434

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.15  E-value=0.016  Score=29.33  Aligned_cols=23  Identities=35%  Similarity=0.714  Sum_probs=19.2

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |.|.+  |++.|.+...|..|+++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTSH
T ss_pred             CCccc--CCCCcCCHHHHHHHHccC
Confidence            67875  999999999999988753

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.29  E-value=0.59  Score=38.75  Aligned_cols=95  Identities=20%  Similarity=0.349  Sum_probs=58.7

Q ss_pred             ChHHHHHHHHHh---cCCCcc-cCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccc-------cCCCCCcc
Q 026846            8 LDFNLRSHMKTH---SQENYH-ICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERI-------TKTPKPPA   76 (232)
Q Consensus         8 ~~~~L~~H~~~H---~~~~p~-~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~-------~~~~~~l~   76 (232)
                      ++..|+.|...-   .|-+-+ .|.+  |...|..-..|.+|+|..+..         |.+|.++       |+.-..|.
T Consensus       200 ~~~~Lr~H~~~G~~e~GFKGHP~C~F--C~~~FYdDDEL~~HcR~~HE~---------ChICD~v~p~~~QYFK~Y~~Le  268 (493)
T COG5236         200 RSSTLRDHKNGGLEEEGFKGHPLCIF--CKIYFYDDDELRRHCRLRHEA---------CHICDMVGPIRYQYFKSYEDLE  268 (493)
T ss_pred             ecccccccccCCccccCcCCCchhhh--ccceecChHHHHHHHHhhhhh---------hhhhhccCccchhhhhCHHHHH
Confidence            456677776542   233333 4876  999999999999999986532         2344443       33333344


Q ss_pred             cccccCCCCCCccCCccccc----ccccChHHHHHHHHhhCCCCC
Q 026846           77 GVYGSASSERPYACPYEGCE----KAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~----k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      .|.+    .--|.|.+-.|-    .+|.....|..|+...|....
T Consensus       269 ~HF~----~~hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~~~  309 (493)
T COG5236         269 AHFR----NAHYCCTFQTCRVGKCYVFPYHTELLEHLTRFHKVNA  309 (493)
T ss_pred             HHhh----cCceEEEEEEEecCcEEEeccHHHHHHHHHHHhhccc
Confidence            4433    223666654452    468899999999988776544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.12  E-value=0.049  Score=32.31  Aligned_cols=33  Identities=18%  Similarity=0.371  Sum_probs=28.4

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .-.|+-.+.|+.  ||..|..+....+|+...|.-
T Consensus        11 ~RDGE~~lrCPR--C~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          11 DRDGEEFLRCPR--CGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             ccCCceeeeCCc--hhHHHHHhHHHHHHhhHHhhh
Confidence            346788999988  999999999999999887754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.04  E-value=0.09  Score=26.09  Aligned_cols=21  Identities=29%  Similarity=0.689  Sum_probs=16.9

Q ss_pred             ccCCcccccccccChHHHHHHHHh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      ..|..  ||+.| ....|.+|++.
T Consensus         3 ~~C~~--CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPI--CGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCC--CCCEE-CHHHHHHHHHh
Confidence            46877  99999 56789999764

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.82  E-value=0.13  Score=27.52  Aligned_cols=23  Identities=26%  Similarity=0.658  Sum_probs=20.4

Q ss_pred             CccCCcccccccccChHHHHHHHHh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      +|.|.+  |++.|.....+..|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            588988  99999999999999875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.30  E-value=0.17  Score=27.05  Aligned_cols=24  Identities=17%  Similarity=0.519  Sum_probs=20.9

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHh
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      +|.|.+  |++.|.....+..|++..
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHChH
Confidence            588986  999999999999998764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4124 consensus Putative transcriptional repressor regulating G2/M transition [Transcription; Cell cycle control, cell division, chromosome partitioning]

Probab=91.16  E-value=0.057  Score=44.53  Aligned_cols=72  Identities=32%  Similarity=0.562  Sum_probs=46.0

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      .+||+|.+|+|.+.+.....|+.|...-+              |..+........-|.---...|||.|.+  |.+.+.-
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h--------------~s~i~~~s~~~~ph~~~~~~nk~~r~~i--~~~~~k~  410 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGH--------------CSPITTPTPAPIPHQGFVVENKPYRCEV--CSKRYKN  410 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCc--------------CCCCCCCCCCCCCcceeeeccCcccChh--hhhhhcc
Confidence            57899999999999999888887754311              1111111111111111112368999988  9999887


Q ss_pred             hHHHHHHH
Q 026846          102 EYKLKLHL  109 (232)
Q Consensus       102 ~~~l~~H~  109 (232)
                      ...|+.|+
T Consensus       411 ~~~l~~~~  418 (442)
T KOG4124|consen  411 LNGLKYHR  418 (442)
T ss_pred             CCCCCcee
Confidence            77777774

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=90.95  E-value=0.34  Score=46.91  Aligned_cols=75  Identities=13%  Similarity=0.121  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      .++|.|..  |...|.....|..|.+.                |-+.++....+.-|+..|..-++| |..  |...|..
T Consensus      1282 ~~~~~~~~--~~~~~~~~~~l~~~~~k----------------~~~~~~~~~~~~~~~l~~~d~~~~-c~~--c~~~~~~ 1340 (1406)
T KOG1146|consen 1282 THRYLCRQ--CKMAFDGEAPLTAHQRK----------------FCFAGRGSGGSMPPPLRVPDCTYH-CLA--CEVLLSG 1340 (1406)
T ss_pred             chhHHHHH--HHhhhcchhHHHHHHHH----------------HHhccCccccCCCCcccCcccccc-chH--HHhhcch
Confidence            45789975  99999999999998832                224455566666677777777888 988  9999999


Q ss_pred             hHHHHHHHHhhCCCCC
Q 026846          102 EYKLKLHLKREHPGHM  117 (232)
Q Consensus       102 ~~~l~~H~~~~h~~~~  117 (232)
                      ...|..|+++.+...+
T Consensus      1341 ~~alqihm~~~~~~~k 1356 (1406)
T KOG1146|consen 1341 REALQIHMRSSAHRRK 1356 (1406)
T ss_pred             hHHHHHHHHHhhhccc
Confidence            9999999998665544

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=89.27  E-value=0.11  Score=40.74  Aligned_cols=40  Identities=23%  Similarity=0.220  Sum_probs=31.2

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHH
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHI   46 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~   46 (232)
                      ||++.|.....|.+|++.    |-|+|.+  |.|.+.+-..|..|.
T Consensus        15 ycnrefddekiliqhqka----khfkchi--chkkl~sgpglsihc   54 (341)
T KOG2893|consen   15 YCNREFDDEKILIQHQKA----KHFKCHI--CHKKLFSGPGLSIHC   54 (341)
T ss_pred             ecccccchhhhhhhhhhh----ccceeee--ehhhhccCCCceeeh
Confidence            788888888888888774    3488886  888877777777763

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=88.77  E-value=0.95  Score=32.04  Aligned_cols=20  Identities=30%  Similarity=0.544  Sum_probs=14.3

Q ss_pred             CCCCccCCcccccccccChHHH
Q 026846           84 SERPYACPYEGCEKAYIHEYKL  105 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l  105 (232)
                      +..|-.|++  ||..|.....+
T Consensus        23 nk~p~vcP~--cg~~~~~~~~~   42 (129)
T TIGR02300        23 NRRPAVSPY--TGEQFPPEEAL   42 (129)
T ss_pred             CCCCccCCC--cCCccCcchhh
Confidence            457888988  99888665333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=88.48  E-value=0.13  Score=40.26  Aligned_cols=51  Identities=24%  Similarity=0.539  Sum_probs=35.4

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      .||| |-|  |++-|....-|..|++.                                     |-|+|.+  |.|...+
T Consensus         9 ~kpw-cwy--cnrefddekiliqhqka-------------------------------------khfkchi--chkkl~s   46 (341)
T KOG2893|consen    9 DKPW-CWY--CNREFDDEKILIQHQKA-------------------------------------KHFKCHI--CHKKLFS   46 (341)
T ss_pred             CCce-eee--cccccchhhhhhhhhhh-------------------------------------ccceeee--ehhhhcc
Confidence            4666 445  99999999999988874                                     3377877  8776666


Q ss_pred             hHHHHHHHHhhCC
Q 026846          102 EYKLKLHLKREHP  114 (232)
Q Consensus       102 ~~~l~~H~~~~h~  114 (232)
                      ...|..|--.+|.
T Consensus        47 gpglsihcmqvhk   59 (341)
T KOG2893|consen   47 GPGLSIHCMQVHK   59 (341)
T ss_pred             CCCceeehhhhhh
Confidence            6666666444443

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=88.30  E-value=0.88  Score=41.43  Aligned_cols=93  Identities=18%  Similarity=0.339  Sum_probs=46.8

Q ss_pred             ChHHHHHHHHHhc-CCCc----ccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcC-CCCCccccCCCCCccccccc
Q 026846            8 LDFNLRSHMKTHS-QENY----HICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRY-ATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         8 ~~~~L~~H~~~H~-~~~p----~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~-~~~c~~~~~~~~~l~~H~~~   81 (232)
                      ++..|.+|++.-- +++-    -.|.+  |...|.....|.+|++.++.    .|.++. ...++.-|.....|..|.+.
T Consensus       161 t~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h~----~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  161 TRAELNLHLMFGDPDDESCRGHPLCKF--CHERFLDDDELYRHLRFDHE----FCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hHHHHHHHHhcCCCccccccCCccchh--hhhhhccHHHHHHhhcccee----heeecCcccccchhcccchHHHHHhhh
Confidence            4556667766421 1221    24655  88888888888888887642    221111 23334444555556666554


Q ss_pred             CCCCCCccCCcccc-cccccChHHHHHHHH
Q 026846           82 ASSERPYACPYEGC-EKAYIHEYKLKLHLK  110 (232)
Q Consensus        82 H~~~k~~~C~~~~C-~k~f~~~~~l~~H~~  110 (232)
                      +.    |.|...-| .+.|.....+..|++
T Consensus       235 ~H----flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  235 GH----FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             cC----ccccccccccceeeehhHHHHHHH
Confidence            33    44542224 233444434444444

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.14  E-value=0.3  Score=27.78  Aligned_cols=28  Identities=36%  Similarity=0.668  Sum_probs=18.6

Q ss_pred             CCCCccCCcccccccccCh----HHHHHHHHhhC
Q 026846           84 SERPYACPYEGCEKAYIHE----YKLKLHLKREH  113 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~----~~l~~H~~~~h  113 (232)
                      +.....|.+  |++.+...    ++|.+|++..|
T Consensus        13 ~~~~a~C~~--C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   13 DKKKAKCKY--CGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             CSS-EEETT--TTEE-----SSTHHHHHHHHHTT
T ss_pred             CcCeEEeCC--CCeEEeeCCCcHHHHHHhhhhhC
Confidence            355678988  99998874    78999997655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=87.23  E-value=0.89  Score=38.26  Aligned_cols=81  Identities=16%  Similarity=0.232  Sum_probs=45.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHH--hc---CCCCCccCCcCCCCCccccCCCCCccc---ccccCCCCCCccCCcccc
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIAS--HH---EKNAAVEVPRYATPPERITKTPKPPAG---VYGSASSERPYACPYEGC   95 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~--h~---~~~~~~c~~~~~~~c~~~~~~~~~l~~---H~~~H~~~k~~~C~~~~C   95 (232)
                      -|.|.  .|...|.....-+.|.++  |.   ..+-..-.    ++.--.|..+..-..   -...-.+.-++.|.+  |
T Consensus         3 ~ftC~--tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lP----PItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~--c   74 (390)
T KOG2785|consen    3 GFTCN--TCNVEFDDADEQRAHYKSDWHRYNLKRKVASLP----PITAEEFNEKVLSDDSEKEENLEEAESVVYCEA--C   74 (390)
T ss_pred             cceee--ceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCC----CcCHHHHhHHHhhhhhhhhhhhhhcccceehHH--h
Confidence            37885  699999999888888886  32   11111100    000000100000000   000112456899988  9


Q ss_pred             cccccChHHHHHHHHhh
Q 026846           96 EKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        96 ~k~f~~~~~l~~H~~~~  112 (232)
                      .|.|........|++..
T Consensus        75 ~k~~~s~~a~~~hl~Sk   91 (390)
T KOG2785|consen   75 NKSFASPKAHENHLKSK   91 (390)
T ss_pred             hccccChhhHHHHHHHh
Confidence            99999999999998863

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=84.96  E-value=1.1  Score=37.31  Aligned_cols=89  Identities=17%  Similarity=0.254  Sum_probs=51.3

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhcCCCCC-ccCCcCC-CCCccccCCCCCcccccccCCCCCCc----cCCccccccc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHHEKNAA-VEVPRYA-TPPERITKTPKPPAGVYGSASSERPY----ACPYEGCEKA   98 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~c~~~~~-~~c~~~~~~~~~l~~H~~~H~~~k~~----~C~~~~C~k~   98 (232)
                      |.|+...|..+....-.|+.|.+..++.--. .|...+. -.|....-+...|+.|...-..+..|    .|.+  |.+.
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F--C~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF--CKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh--ccce
Confidence            7777666777777777888888875542110 1211111 11222233445566665543323222    3777  8888


Q ss_pred             ccChHHHHHHHHhhCCC
Q 026846           99 YIHEYKLKLHLKREHPG  115 (232)
Q Consensus        99 f~~~~~l~~H~~~~h~~  115 (232)
                      |..-..|.+|+|..|..
T Consensus       230 FYdDDEL~~HcR~~HE~  246 (493)
T COG5236         230 FYDDDELRRHCRLRHEA  246 (493)
T ss_pred             ecChHHHHHHHHhhhhh
Confidence            88888888888876643

>PF02724 CDC45: CDC45-like protein; InterPro: IPR003874 CDC45 is an essential gene required for initiation of DNA replication in Saccharomyces cerevisiae (cell division control protein 45), forming a complex with MCM5/CDC46

Probab=84.45  E-value=0.67  Score=42.37  Aligned_cols=10  Identities=10%  Similarity=0.056  Sum_probs=4.8

Q ss_pred             hhHHHHHHHh
Q 026846           40 YKLKNHIASH   49 (232)
Q Consensus        40 ~~l~~H~~~h   49 (232)
                      ..|.++...+
T Consensus        39 ~el~~~~~~~   48 (622)
T PF02724_consen   39 SELERAYEEL   48 (622)
T ss_pred             HHHHHHHHHH
Confidence            4455554444

Homologs of CDC45 have been identified in human [], mouse and the smut fungus, Melampsora spp., (tsd2 protein) among others.; GO: 0006270 DNA-dependent DNA replication initiation

>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function

Probab=84.30  E-value=3.9  Score=30.23  Aligned_cols=56  Identities=16%  Similarity=0.131  Sum_probs=36.9

Q ss_pred             CCCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCCCCC
Q 026846           62 ATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSD  119 (232)
Q Consensus        62 ~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~~  119 (232)
                      |++|+.......... --|.+...|+-.|..++|..+ .+...|++|.|..|+...|.
T Consensus        83 CPLCRG~V~GWtvve-~AR~~LN~K~RsC~~e~C~F~-GtY~eLrKHar~~HP~~rP~  138 (162)
T PF07800_consen   83 CPLCRGEVKGWTVVE-PARRFLNAKKRSCSQESCSFS-GTYSELRKHARSEHPSARPS  138 (162)
T ss_pred             CccccCceeceEEch-HHHHHhccCCccCcccccccc-cCHHHHHHHHHhhCCCCCCc
Confidence            355654433322221 144556678889998889754 46678999999999887654

The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=84.11  E-value=0.37  Score=36.95  Aligned_cols=47  Identities=19%  Similarity=0.350  Sum_probs=24.9

Q ss_pred             ccccCCChHHHHHHHH-Hhc---------CCCcccCCCCCCCccccchhhHHHHHHH
Q 026846            2 KAVAFSLDFNLRSHMK-THS---------QENYHICPYPDCGKRYAHEYKLKNHIAS   48 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~-~H~---------~~~p~~C~~~~C~~~f~~~~~l~~H~~~   48 (232)
                      |.++|.+..-|..|+. .|.         |.-.|.|-+..|+..|.+.-..+.|+..
T Consensus       112 C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  112 CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            5555555555555543 231         3344555555566556555555555443

>smart00614 ZnF_BED BED zinc finger

Probab=82.64  E-value=1  Score=26.32  Aligned_cols=25  Identities=40%  Similarity=0.856  Sum_probs=19.4

Q ss_pred             ccCCcccccccccCh-----HHHHHHHHhhCC
Q 026846           88 YACPYEGCEKAYIHE-----YKLKLHLKREHP  114 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~-----~~l~~H~~~~h~  114 (232)
                      =.|.+  |++.+...     ++|.+|++..|+
T Consensus        19 a~C~~--C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKY--CGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecC--CCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            46888  99988765     699999985454

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=82.45  E-value=1.2  Score=40.58  Aligned_cols=103  Identities=16%  Similarity=0.164  Sum_probs=56.4

Q ss_pred             CChHHHHHHHH-HhcCCCcccCC-----CCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            7 SLDFNLRSHMK-THSQENYHICP-----YPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         7 ~~~~~L~~H~~-~H~~~~p~~C~-----~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      .....|+.|+. .|..-.-..|.     +..|.|-|. ...|+.|+..--..-......-.|..|...|-....|+.|++
T Consensus       125 ~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt-~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~  203 (669)
T KOG2231|consen  125 KSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYT-RAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLR  203 (669)
T ss_pred             hHHHHHHHHHHHhhhhhccccccccceeeeeeeeheh-HHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhc
Confidence            35677888884 56432221221     001334443 455666655421100010111333667777777777888877


Q ss_pred             cCCCCCCccCCc----ccccccccChHHHHHHHHhhCC
Q 026846           81 SASSERPYACPY----EGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        81 ~H~~~k~~~C~~----~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .+.    |.|.+    .+++..|.....|..|-+..|-
T Consensus       204 ~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  204 FDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             cce----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            654    44444    2245668888999999988774

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=81.59  E-value=1.2  Score=30.91  Aligned_cols=26  Identities=27%  Similarity=0.604  Sum_probs=23.0

Q ss_pred             CccC----CcccccccccChHHHHHHHHhhCC
Q 026846           87 PYAC----PYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        87 ~~~C----~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|.|    ..  |+..+++...|.+|++.+|+
T Consensus        80 G~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence            4889    66  99999999999999998874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	232
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		9e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-04

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 33/105 (31%)
Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AF     L+ H   H+ E    C +  CGKR++ ++ L+ H+  H               
Sbjct: 43  AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH--------------- 87
Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHL 109
                             + +RPY CP++GC K +     LK H+
Sbjct: 88  ------------------TGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           +F   + L +H++ H+ E    CP+P CGK +A    LK H  +H               
Sbjct: 71  SFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH--------------- 115
Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHL 109
                             + E+P+ C +EGC++ + +    K H+
Sbjct: 116 ------------------TGEKPFKCEFEGCDRRFANSSDRKKHM 142

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 6   FSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPP 65
           F   + L  HM+ H+ E  H C +  C K Y+    LK H+ SH       E P Y    
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH-----TGEKP-YMCEH 102
Query: 66  ERITKTPKPPAGVYG----SASSERPYACPYEGCEKAYIHEYKLKLHLKREH 113
           E  +K     +        + S+E+PY C   GC K Y     L+ H+K  H
Sbjct: 103 EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	232
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	5e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 33/111 (29%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
            F   + L  HM+ H+ E  H C +  C K Y+    LK H+ SH               
Sbjct: 48  PFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH--------------- 92

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + E+PY C +EGC KA+ +      H  R H  
Sbjct: 93  ------------------TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 32/106 (30%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           ++S   NL++H+++H+ E  ++C +  C K +++      H    H              
Sbjct: 78  SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-------------- 123

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK 110
                             S+E+PY C   GC K Y     L+ H+K
Sbjct: 124 ------------------SNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 5e-06
 Identities = 23/117 (19%), Positives = 36/117 (30%), Gaps = 40/117 (34%)

Query: 5   AFSLDFNLRSHMKT---HSQENYHICP---YPDCGKRYAHEYKLKNHIASHHEKNAAVEV 58
            F     L  H+ +   H +    +C         + +  +Y L  H+  H         
Sbjct: 12  EFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH--------- 62

Query: 59  PRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                                   + E+P+ C +EGC K+Y     LK H  R H G
Sbjct: 63  ------------------------TGEKPHKCTFEGCRKSYSRLENLKTH-LRSHTG 94

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 5   AFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNHIASHH 50
           AFS   +   H   THS E  ++C  P C KRY     L+ H+ + H
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 34/111 (30%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           +F   + L +H++ H+ E    CP+P CGK +A    LK H  +H               
Sbjct: 71  SFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH--------------- 115

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + E+P+ C +EGC++ + +    K H    H  
Sbjct: 116 ------------------TGEKPFKCEFEGCDRRFANSSDRKKH-MHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 41/118 (34%)

Query: 5   AFSLDFNLRSHMKTHSQE----NYHICPYPDC---GKRYAHEYKLKNHIASHHEKNAAVE 57
            FS    L +H+          N H+C + +C   GK +  +YKL NHI  H        
Sbjct: 34  TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH-------- 85

Query: 58  VPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                                    + E+P+ CP+ GC K +     LK+H KR H G
Sbjct: 86  -------------------------TGEKPFPCPFPGCGKIFARSENLKIH-KRTHTG 117

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.5 bits (121), Expect = 5e-09
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 34/102 (33%)

Query: 12  LRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKT 71
                   S+   HIC +P CGK Y     LK H  +H                      
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH---------------------- 42

Query: 72  PKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH 113
                      + E+P++C ++GCE+ +    +L  H +R H
Sbjct: 43  -----------TGEKPFSCSWKGCERRFARSDELSRH-RRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 11 NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
          +L++H +TH+ E    C +  C +R+A   +L  H  +H
Sbjct: 34 HLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)

Query: 83  SSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           S  R + C + GC K Y     LK H  R H G
Sbjct: 13  SRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTG 44

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 34/111 (30%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           AF     L+ H   H+ E    C +  CGKR++ ++ L+ H+  H               
Sbjct: 43  AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH--------------- 87

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + +RPY CP++GC K +     LK H    H  
Sbjct: 88  ------------------TGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 37/111 (33%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
            F  +  +R H+ TH     H+C   +CGK +    KLK H   H               
Sbjct: 16  MFRDNSAMRKHLHTHG-PRVHVC--AECGKAFVESSKLKRHQLVH--------------- 57

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + E+P+ C +EGC K +  ++ L+ H  R H G
Sbjct: 58  ------------------TGEKPFQCTFEGCGKRFSLDFNLRTH-VRIHTG 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 23/111 (20%), Positives = 34/111 (30%), Gaps = 40/111 (36%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           +           + H       C YP C K Y     LK H+ +H               
Sbjct: 2   SSGSSGPDLEKRRIH------YCDYPGCTKVYTKSSHLKAHLRTH--------------- 40

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + E+PY C +EGC+  +    +L  H  R+H G
Sbjct: 41  ------------------TGEKPYKCTWEGCDWRFARSDELTRH-YRKHTG 72

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 35/101 (34%)

Query: 11  NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITK 70
           +L++H++TH+ E  + C +  C  R+A   +L  H   H                     
Sbjct: 32  HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH--------------------- 70

Query: 71  TPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKR 111
                       +  +P+ C    C +++     L LH+KR
Sbjct: 71  ------------TGAKPFQCGV--CNRSFSRSDHLALHMKR 97

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 34/92 (36%)

Query: 25  HICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASS 84
           ++C + +CGK +    +LK H  SH                                 + 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSH---------------------------------TQ 28

Query: 85  ERPYACPYEGCEKAYIHEYKLKLHLKREHPGH 116
           + PY CP+EGC+K +    +LK H ++ H G+
Sbjct: 29  QLPYECPHEGCDKRFSLPSRLKRH-EKVHAGY 59

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 5  AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
          AF     L+ H  +H+Q+  + CP+  C KR++   +LK H   H
Sbjct: 12 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 39/107 (36%)

Query: 11  NLRSHMKTHSQENYHICPY--PDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERI 68
           +  S  +THS E     PY    C  R+     +K HI   H +N               
Sbjct: 2   SSGSSGRTHSGEK----PYECYICHARFTQSGTMKMHILQKHTEN--------------- 42

Query: 69  TKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                              + CP+  C+     +  L +HL+++H  
Sbjct: 43  ----------------VAKFHCPH--CDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 10/52 (19%), Positives = 17/52 (32%), Gaps = 6/52 (11%)

Query: 5  AFSLDFNLRSHMKTHSQENYHICPY--PDCGKRYAHEYKLKNHIASHH--EK 52
           F+    ++ H+     EN     +  P C    A +  L  H+   H    
Sbjct: 24 RFTQSGTMKMHILQKHTENVA--KFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 23/112 (20%), Positives = 34/112 (30%), Gaps = 34/112 (30%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH-EKNAAVEVPRYAT 63
            F+   +L  H  TH+ E    C    C  R+  +  +K H    H  K           
Sbjct: 53  GFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK----------- 101

Query: 64  PPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                                   Y C +E C KA+    +LK+H +  H  
Sbjct: 102 ---------------------ICVYVCHFENCGKAFKKHNQLKVH-QFSHTQ 131

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.7 bits (104), Expect = 9e-06
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 34/101 (33%)

Query: 15  HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKP 74
                     +IC + DCG  Y   +KL+ H+  H                         
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH------------------------- 37

Query: 75  PAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                   + E+P+ C  EGCEK +   + L  H    H G
Sbjct: 38  --------TGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTG 69

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 36/113 (31%)

Query: 5   AFSLDFNLRSHMKTHSQENYH--ICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYA 62
            F+   N++ H            +C + +CGK +    +LK H  SH             
Sbjct: 83  RFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH------------- 129

Query: 63  TPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                               + + PY CP+EGC+K +    +LK H ++ H G
Sbjct: 130 --------------------TQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAG 161

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 34/111 (30%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
           A++ ++ L++H+  H+ E    C    C K +   + L  H  +H               
Sbjct: 23  AYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH--------------- 67

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             + E+ + C  +GC+  +  +  +K H       
Sbjct: 68  ------------------TGEKNFTCDSDGCDLRFTTKANMKKH-FNRFHN 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 34/92 (36%)

Query: 25  HICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASS 84
           H C Y  CGK Y     LK H+ +H                                 + 
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTH---------------------------------TG 32

Query: 85  ERPYACPYEGCEKAYIHEYKLKLHLKREHPGH 116
           E+PY C ++GC   +    +L  H  R+H GH
Sbjct: 33  EKPYHCDWDGCGWKFARSDELTRH-YRKHTGH 63

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 39/107 (36%)

Query: 11  NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITK 70
           +L++H++TH+ E  + C +  CG ++A   +L  H   H                     
Sbjct: 22  HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH--------------------- 60

Query: 71  TPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM 117
                       +  RP+ C    C++A+     L LH+KR    H 
Sbjct: 61  ------------TGHRPFQCQK--CDRAFSRSDHLALHMKR----HF 89

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.2 bits (101), Expect = 5e-06
 Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 4/104 (3%)

Query: 11  NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITK 70
           + + +    +  +   C   DC   Y    +L  H+                 P      
Sbjct: 6   SGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKP 63

Query: 71  TPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP 114
             +    + G   +++   C Y  C  ++     L +H+ +   
Sbjct: 64  RKRSLLEMEGKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKH 105

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 33/97 (34%)

Query: 19  HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGV 78
            S  +   C +P CG+ +++   L +H                     +           
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHK--------------------KYQHI------- 34

Query: 79  YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                 ++ ++CP   C K++  +  LK H  + H  
Sbjct: 35  -----HQKSFSCPEPACGKSFNFKKHLKEH-MKLHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 21/92 (22%), Positives = 26/92 (28%), Gaps = 34/92 (36%)

Query: 5  AFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYAT 63
           FS    L  H K  H  +    CP P CGK +  +  LK H+  H              
Sbjct: 18 IFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH-------------- 63

Query: 64 PPERITKTPKPPAGVYGSASSERPYACPYEGC 95
                             S  R Y C + G 
Sbjct: 64 -------------------SDTRDYICEFSGP 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 5  AFSLDFNLRSHMKTHSQENYHICPYP--DCGKRYAHEYKLKNHIASHH 50
                +L  H + H++    +  +P   CGKR+     +  H +  H
Sbjct: 16 TCRQKASLNWHQRKHAETVAAL-RFPCEFCGKRFEKPDSVAAHRSKSH 62

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 36/111 (32%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP 64
            +    +L+ H + H+ E  + C + DC +R++   +LK H   H               
Sbjct: 17  RYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH--------------- 61

Query: 65  PERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
                             +  +P+ C  + C++ +     LK H  R H G
Sbjct: 62  ------------------TGVKPFQC--KTCQRKFSRSDHLKTH-TRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 40/111 (36%)

Query: 5   AFSLDFNLRSHMKTHSQENYHICPY--PDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYA 62
            FS    L+ H + H+       P+    C ++++    LK H  +H             
Sbjct: 47  RFSRSDQLKRHQRRHTGVK----PFQCKTCQRKFSRSDHLKTHTRTH------------- 89

Query: 63  TPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH 113
                               + E+P++C +  C+K +    +L  H    H
Sbjct: 90  --------------------TGEKPFSCRWPSCQKKFARSDELVRH-HNMH 119

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.8 bits (91), Expect = 5e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
          S   + + E    C +P CG R++   +L  H  SH
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 5  AFSLDFNLRSHMKTHSQENYHICPY--PDCGKRYAHEYKLKNHIASHHEK 52
           FS   +L +H++TH+ E     P+    CG+++A   + K H    H  
Sbjct: 12 NFSRSDHLTTHIRTHTGEK----PFACDICGRKFARSDERKRHRDIQHIL 57

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 82  ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
              ++ + C  +GC K Y     L+ HL R H G
Sbjct: 3   PGKKKQHICHIQGCGKVYGKTSHLRAHL-RWHTG 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	232
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.83
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.79
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.75
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.72
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.57
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.57
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.5
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.5
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.5
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.49
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.39
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.37
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.37
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.37
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.37
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.34
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.32
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.31
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.31
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.29
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.24
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.23
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.18
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.16
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.16
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.05
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.04
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.02
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.01
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.0
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.94
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.93
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.91
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.88
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.85
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.84
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.84
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.84
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.83
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.83
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.83
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.82
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.82
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.81
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.81
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.8
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.8
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.79
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.75
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.71
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.67
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.66
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.64
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.63
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.61
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.6
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.58
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.58
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.56
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.54
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.51
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.48
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.46
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.45
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.43
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.41
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.39
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.36
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.34
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.33
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.32
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.32
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.3
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.28
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.27
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.25
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.53
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.5
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.16
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.14
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.13
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.11
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.11
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.38
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.08
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.07
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.07
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.07
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.34
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.01
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.97
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.97
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.04
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.91
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.82
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.5
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.31
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.42
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	88.95
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	88.72
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.81
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	84.41
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.4

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=3.3e-25  Score=156.99  Aligned_cols=104  Identities=20%  Similarity=0.353  Sum_probs=99.3

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~   81 (232)
                      |++.|.....|..|+++|.+.+||.|.|+.|++.|.+...|..|+++|++.++|.|     ..|++.|.....|..|+++
T Consensus        14 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~   88 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC-----KTCQRKFSRSDHLKTHTRT   88 (119)
T ss_dssp             SCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEEC-----TTTCCEESCHHHHHHHHHH
T ss_pred             CcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccC-----CccCchhCCHHHHHHHHHH
Confidence            99999999999999999999999999755699999999999999999999999999     8899999999999999999


Q ss_pred             CCCCCCccC--CcccccccccChHHHHHHHHhh
Q 026846           82 ASSERPYAC--PYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        82 H~~~k~~~C--~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |++++||.|  ..  |+++|.+...|..|+++|
T Consensus        89 h~~~~~~~C~~~~--C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           89 HTGEKPFSCRWPS--CQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHTCCCEECCSTT--CCCEESSHHHHHHHHHTC
T ss_pred             hcCCCCeeCCCCC--CccccCCHHHHHHHHhcC
Confidence            999999999  66  999999999999999873

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.7e-24  Score=159.30  Aligned_cols=108  Identities=28%  Similarity=0.498  Sum_probs=86.6

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCC--CccccCCCCCccccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP--PERITKTPKPPAGVY   79 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~--c~~~~~~~~~l~~H~   79 (232)
                      |++.|.....|.+|+++|++++||.|.++.|++.|.+...|..|+++|++.+||.|     ..  |++.|.....|..|+
T Consensus        45 c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           45 ELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC-----EHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEEC-----CSTTCCCEESSSSTTHHHH
T ss_pred             hhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeC-----CCCCCCCccCCHHHHHHHH
Confidence            45778888888888888888888888644588888888888888888888888777     55  888888888888888


Q ss_pred             -ccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           80 -GSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        80 -~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                       ++|++++||.|.+++|+++|.+...|..|+++||+
T Consensus       120 ~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence             78888888888555588888888888888888663

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=4.1e-24  Score=152.30  Aligned_cols=107  Identities=22%  Similarity=0.384  Sum_probs=100.9

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHH---hcCCCCCccCCcCCCCCccccCCCCCccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIAS---HHEKNAAVEVPRYATPPERITKTPKPPAG   77 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~c~~~~~~~c~~~~~~~~~l~~   77 (232)
                      +|++.|.....|.+|+++|.+++||.|.+  |++.|.+...|..|++.   |.+.++|.|     ..|++.|.....|..
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C-----~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A           12 TCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTC-----SVCQETFRRRMELRL   84 (124)
T ss_dssp             TTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEEC-----SSSCCEESSHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeEC-----CCCCCccCCHHHHHH
Confidence            59999999999999999999999999975  99999999999999996   567888888     889999999999999


Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |+++|.+++||.|.+  |++.|.+...|..|++.+|.+.
T Consensus        85 H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           85 HMVSHTGEMPYKCSS--CSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHSSSCSEECSS--SCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHcCCCCCccCCC--ccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999988  9999999999999999888774

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=3.1e-24  Score=153.13  Aligned_cols=106  Identities=25%  Similarity=0.434  Sum_probs=98.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCC--CccccCCCCCcccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP--PERITKTPKPPAGV   78 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~--c~~~~~~~~~l~~H   78 (232)
                      .|++.|.....|..|+++| +.++|.|.+  |++.|.+...|..|++.|++.+||.|     ..  |++.|.....|..|
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQC-----TFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEEC-----CSTTCCCEESCHHHHHHH
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeC-----CCCCCcCccCCHHHHHHH
Confidence            4999999999999999999 899999975  99999999999999999999999998     54  99999999999999


Q ss_pred             cccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           79 YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        79 ~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +++|.++++|.|.+..|+++|.+...|..|+++|+.
T Consensus        84 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            999999999999533499999999999999998654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.87  E-value=2e-23  Score=159.81  Aligned_cols=101  Identities=26%  Similarity=0.454  Sum_probs=57.9

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~   81 (232)
                      |++.|.....|..|+++|.++++|.|.+  |++.|.+...|..|+++|++.+||.|     ..|++.|.....|..|+++
T Consensus        83 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~L~~H~~~  155 (190)
T 2i13_A           83 CGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKC-----PECGKSFSREDNLHTHQRT  155 (190)
T ss_dssp             TCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHHHHHHCCCCEEC-----TTTCCEESCHHHHHHHHHH
T ss_pred             cCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhCCCCCeEC-----CCCCcccCCHHHHHHHHHh
Confidence            4555555555555555555555555543  55555555555555555555555554     5566666666666666666


Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHh
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      |.+++||.|.+  |+++|.+...|..|+++
T Consensus       156 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~  183 (190)
T 2i13_A          156 HTGEKPYKCPE--CGKSFSRRDALNVHQRT  183 (190)
T ss_dssp             HHCCCCEECTT--TCCEESSHHHHHHHHTT
T ss_pred             cCCCCCeECCC--CCCccCCHHHHHHHHHh
Confidence            66666666655  66666666666666655

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=8.3e-23  Score=151.34  Aligned_cols=107  Identities=23%  Similarity=0.381  Sum_probs=98.2

Q ss_pred             CccccCCChHHHHHHHHH-hcCCCc--------ccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCC--Ccccc
Q 026846            1 MKAVAFSLDFNLRSHMKT-HSQENY--------HICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP--PERIT   69 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H~~~~p--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~--c~~~~   69 (232)
                      +|++.|.....|.+|+++ |.+.++        |.|.+  |++.|.....|..|+++|++.++|.|     ..  |++.|
T Consensus        30 ~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~~~C~~~f  102 (155)
T 2rpc_A           30 SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPC-----PFPGCGKIF  102 (155)
T ss_dssp             CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEEC-----SCTTTCCEE
T ss_pred             cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccC-----CcCCCCCcc
Confidence            599999999999999997 887765        89975  99999999999999999999999998     66  99999


Q ss_pred             CCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           70 KTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        70 ~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .....|..|+++|++++||.|.+.+|+++|.+...|..|+++|+.
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999999999744599999999999999988543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=8.1e-24  Score=152.92  Aligned_cols=96  Identities=20%  Similarity=0.239  Sum_probs=87.3

Q ss_pred             HHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCC
Q 026846           12 LRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACP   91 (232)
Q Consensus        12 L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~   91 (232)
                      +..|.++|.|++||+|.+  |+++|.+...|..|+++|++.+||.|     ..|++.|.....|..|+++|+|++||.|.
T Consensus        10 ~~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C-----~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   82 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPC-----RYCEKVFPLAEYRTKHEIHHTGERRYQCL   82 (133)
T ss_dssp             SSEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEEC-----SSSSCEESSHHHHHHHHHHHHTCCCEEES
T ss_pred             HhhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeC-----CccCeecccccchhhhccccCCCccccCC
Confidence            334556889999999975  99999999999999999999999998     88999999999999999999999999998


Q ss_pred             cccccccccChHHHHHHHHhhCCCC
Q 026846           92 YEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        92 ~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .  ||++|.+...|..|++++|+..
T Consensus        83 ~--C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           83 A--CGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             S--SCCEESSHHHHHHHHHHHTCCC
T ss_pred             C--CCCCcCCHHHHHHHhHHhcCCC
Confidence            7  9999999999999999988654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=1.6e-22  Score=142.43  Aligned_cols=100  Identities=12%  Similarity=0.219  Sum_probs=89.7

Q ss_pred             hHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHH--hcCCCCCc-cCCcCCCCCcccc--CCCCCcccccccCC
Q 026846            9 DFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIAS--HHEKNAAV-EVPRYATPPERIT--KTPKPPAGVYGSAS   83 (232)
Q Consensus         9 ~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~-c~~~~~~~c~~~~--~~~~~l~~H~~~H~   83 (232)
                      ...|.+|+++|++++||.|.+  |++.|.++..|..|+++  |.+.+++. |     ..|++.|  .....|..|+++|+
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C-----~~C~~~f~f~~~~~l~~H~~~H~   76 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETD-----NNNPKRWSKPRKRSLLEMEGKED   76 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCC-----CCCCSCCSSCCCCCCCCCCCSCC
T ss_pred             chhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccC-----CCCCcccccccHHHHHHHhhccC
Confidence            456888999999999999975  99999999999999999  76666554 5     8899999  99999999999999


Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      +++||.|.+  |++.|.+...|..|++++|....
T Consensus        77 ~~~~~~C~~--C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           77 AQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CCSSCBCSS--SCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCcceECCC--CCCccCCHHHHHHHHHHhCCccc
Confidence            999999988  99999999999999999876543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.85  E-value=2e-22  Score=154.31  Aligned_cols=105  Identities=24%  Similarity=0.406  Sum_probs=90.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|.++++|.|.+  |++.|.+...|..|++.|++.++|.|     ..|++.|.....|..|++
T Consensus        54 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           54 ECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYAC-----PECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             TTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEEC-----TTTCCEESSHHHHHHHHH
T ss_pred             CcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcC-----CCCCCccCCHHHHHHHHH
Confidence            47888888888888888888888888864  88888888888888888888888877     789999999999999999


Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|.+++||.|.+  |+++|.....|..|+++|+.
T Consensus       127 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A          127 THTGEKPYKCPE--CGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             HHHCCCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             HhCCCCCeECCC--CCcccCCHHHHHHHHHhcCC
Confidence            999999999987  99999999999999988654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=1.5e-22  Score=146.20  Aligned_cols=94  Identities=19%  Similarity=0.202  Sum_probs=87.3

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |+++|.++..|..|+++|++.+||.|     ..|++.|.....|..|++
T Consensus        27 ~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C-----~~C~k~F~~~~~L~~H~~   99 (133)
T 2lt7_A           27 VCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQC-----LACGKSFINYQFMSSHIK   99 (133)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEE-----SSSCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccC-----CCCCCCcCCHHHHHHHhH
Confidence            59999999999999999999999999975  99999999999999999999999999     899999999999999999


Q ss_pred             cCCCC------CCccCCcccccccccChH
Q 026846           81 SASSE------RPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        81 ~H~~~------k~~~C~~~~C~k~f~~~~  103 (232)
                      +|.++      ++|+|..  |++.|....
T Consensus       100 ~hh~~~p~~~~k~~~C~~--C~k~~~~~~  126 (133)
T 2lt7_A          100 SVHSQDPSGDSKLYRLHP--CRSLQIRQY  126 (133)
T ss_dssp             HHTCCCTTSSSCCEEECC--CCSSCCCCC
T ss_pred             HhcCCCCCCCCCCeecCC--CCchhhhcc
Confidence            98765      4689987  999998653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=8.4e-22  Score=145.76  Aligned_cols=114  Identities=20%  Similarity=0.342  Sum_probs=100.4

Q ss_pred             CccccCCChHHHHHHHH---HhcCCCcccCCCCCC---CccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCC
Q 026846            1 MKAVAFSLDFNLRSHMK---THSQENYHICPYPDC---GKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKP   74 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~---~H~~~~p~~C~~~~C---~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~   74 (232)
                      +|++.|.....|..|++   +|.+.++|.|.+..|   ++.|.+...|..|++.|++.+||.|..   ..|++.|.....
T Consensus         8 ~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~---~~C~~~f~~~~~   84 (155)
T 2gli_A            8 GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF---EGCRKSYSRLEN   84 (155)
T ss_dssp             TCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS---TTCCCCCSSHHH
T ss_pred             CCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC---CCCCCcccCHHH
Confidence            59999999999999998   689999999975334   599999999999999999999999821   149999999999


Q ss_pred             cccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           75 PAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        75 l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      |..|+++|.+.+||.|.+.+|+++|.+...|..|++..|.+..
T Consensus        85 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A           85 LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             HHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred             HHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999755699999999999999955576544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=8.7e-22  Score=150.69  Aligned_cols=114  Identities=22%  Similarity=0.312  Sum_probs=84.4

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCC---------------------
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVP---------------------   59 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~---------------------   59 (232)
                      .|++.|.....|..|+++|++++||.|.++.|++.|.+...|..|+++|++.++|.|..                     
T Consensus        19 ~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           19 DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             TTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTS
T ss_pred             CCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhc
Confidence            48889999999999998898888999832249999999999999998888888887740                     


Q ss_pred             ------cCC--CCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           60 ------RYA--TPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        60 ------~~~--~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                            +.|  ..|++.|.....|..|+++|++++||.|.+.+|+++|.+...|..|+++|++
T Consensus        99 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           99 NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence                  112  4577777777777777777777777777433377777777777777766433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.83  E-value=2.8e-21  Score=147.84  Aligned_cols=93  Identities=20%  Similarity=0.399  Sum_probs=76.6

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKA   98 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~   98 (232)
                      ..+.++|.|.++.|++.|.+...|..|++.|++.+||.|..   ..|++.|.....|..|+++|.++++|.|....|++.
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   83 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKE---EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR   83 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSS---TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCE
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCC---CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCc
Confidence            35688999965569999999999999999999999998732   468899999999999999999999999972139999


Q ss_pred             ccChHHHHHHHHhhCC
Q 026846           99 YIHEYKLKLHLKREHP  114 (232)
Q Consensus        99 f~~~~~l~~H~~~~h~  114 (232)
                      |.....|..|++.+|.
T Consensus        84 f~~~~~l~~H~~~~h~   99 (190)
T 1tf6_A           84 FTTKANMKKHFNRFHN   99 (190)
T ss_dssp             ESCHHHHHHHHHTTSS
T ss_pred             cCCHHHHHHHHHHhcC
Confidence            9999999999866563

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=8.1e-21  Score=127.58  Aligned_cols=86  Identities=21%  Similarity=0.345  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      ++||.|.++.|++.|.....|..|+++|++.++|.|     ..|++.|.....|..|+++|.+.+||.|..  |++.|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC-----RICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEEC-----TTTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESS
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccC-----CCCCcccCCHHHHHHHHHHcCCCCCccCCC--CCchhCC
Confidence            445555433455555555555555555555555555     455555555555555555556789999988  9999999


Q ss_pred             hHHHHHHHHhhCC
Q 026846          102 EYKLKLHLKREHP  114 (232)
Q Consensus       102 ~~~l~~H~~~~h~  114 (232)
                      ...|..|+++|++
T Consensus        75 ~~~l~~H~~~H~~   87 (90)
T 1a1h_A           75 SDERKRHTKIHLR   87 (90)
T ss_dssp             HHHHHHHHGGGGC
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999998654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.8e-20  Score=126.47  Aligned_cols=88  Identities=23%  Similarity=0.381  Sum_probs=77.2

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKA   98 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~   98 (232)
                      +.+++||+|.+  |++.|.+...|..|++.|++.++|.|     ..|++.|.....|..|+++|.++++|.|.+  |++.
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~   73 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKC-----KTCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYA   73 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEEC-----SSSCCEESSHHHHHHHHHHSCCCCCEECSS--SSCE
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeC-----CCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCCc
Confidence            45778888975  99999988889999888888888888     788888888888888988899999999988  9999


Q ss_pred             ccChHHHHHHHHhhCCC
Q 026846           99 YIHEYKLKLHLKREHPG  115 (232)
Q Consensus        99 f~~~~~l~~H~~~~h~~  115 (232)
                      |.....|..|+++|+..
T Consensus        74 f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           74 SRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             ESSHHHHHHHHTTCCSC
T ss_pred             cCCHHHHHHHHHHhcCC
Confidence            99999999999986554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=5.1e-20  Score=128.48  Aligned_cols=88  Identities=18%  Similarity=0.320  Sum_probs=82.7

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEK   97 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k   97 (232)
                      .|++++||.| .  |++.|.+...|..|++.|++.++|.|     ..|++.|.....|..|+++|.++++|.|.+  |++
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~   73 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGC-----GVCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAK   73 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEEC-----TTTSCEESSSHHHHHHHTTTCCCCCEECSS--SCC
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccC-----CCCCcccCCHHHHHHHHHHcCCCCCeeCCC--Ccc
Confidence            4889999999 6  99999999999999999999999998     789999999999999999999999999988  999


Q ss_pred             cccChHHHHHHHHhhCCC
Q 026846           98 AYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        98 ~f~~~~~l~~H~~~~h~~  115 (232)
                      .|.+...|..|++++|..
T Consensus        74 ~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           74 RFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             EESCHHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHcccc
Confidence            999999999999997753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=2.5e-19  Score=124.01  Aligned_cols=86  Identities=19%  Similarity=0.391  Sum_probs=77.8

Q ss_pred             cCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccc
Q 026846           20 SQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAY   99 (232)
Q Consensus        20 ~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f   99 (232)
                      .+.++|.|.+  |++.|.....|..|++.|++.++|.|     ..|++.|.....|..|+++|.++++|.|.+  |++.|
T Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f   83 (106)
T 2ee8_A           13 KTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTC-----DICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGF   83 (106)
T ss_dssp             CCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBC-----SSSCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCC
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC-----CCccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcc
Confidence            4578899975  99999999999999999999999988     789999999999999999999999999988  99999


Q ss_pred             cChHHHHHHHHhhCC
Q 026846          100 IHEYKLKLHLKREHP  114 (232)
Q Consensus       100 ~~~~~l~~H~~~~h~  114 (232)
                      .+...|..|+++|+.
T Consensus        84 ~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           84 CQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             SSHHHHHHHHHHTTS
T ss_pred             cCHHHHHHHHHHhCC
Confidence            999999999988544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.5e-20  Score=128.73  Aligned_cols=93  Identities=13%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEG   94 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~   94 (232)
                      ++++|++++||+|.+  |++.|.....|..|+++|.  ++|.|     ..|++.|.....|..|++ |++++||.|.+  
T Consensus         7 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~--~~~~C-----~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--   74 (107)
T 1wjp_A            7 GASPVENKEVYQCRL--CNAKLSSLLEQGSHERLCR--NAAVC-----PYCSLRFFSPELKQEHES-KCEYKKLTCLE--   74 (107)
T ss_dssp             CCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHHH--HSBCC-----TTTCCCBSSHHHHHHHHH-HCSTGGGEEGG--
T ss_pred             cCcccCCCcCeECCC--CCCccCCHHHHHHHHHHCC--CCccC-----CCCCCccCCHHHHHHHHH-cCCCCCccCcc--
Confidence            456789999999975  9999999999999999994  68887     889999999999999996 99999999987  


Q ss_pred             ccccccChHHHHHHHHhhCCCCCCC
Q 026846           95 CEKAYIHEYKLKLHLKREHPGHMSD  119 (232)
Q Consensus        95 C~k~f~~~~~l~~H~~~~h~~~~~~  119 (232)
                      |++.|.+...|..|++.+|.+..+.
T Consensus        75 C~~~f~~~~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           75 CMRTFKSSFSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             GTEECSSHHHHHHHHHHTSCCCCCC
T ss_pred             ccchhCCHHHHHHHHHHHcCCCCCC
Confidence            9999999999999998678776543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.5e-19  Score=122.60  Aligned_cols=87  Identities=24%  Similarity=0.361  Sum_probs=59.4

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCC--CCccCCccccccc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSE--RPYACPYEGCEKA   98 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~--k~~~C~~~~C~k~   98 (232)
                      ++++|.|.+  |++.|.....|..|+++|++.++|.|     ..|++.|.....|..|+++|.+.  ++|.|.+  |++.
T Consensus         4 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~   74 (95)
T 2yt9_A            4 GSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSC-----PVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKG   74 (95)
T ss_dssp             CCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEEC-----SSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS--SCCC
T ss_pred             CCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcC-----CCCCCccCCHHHHHHHHHHhcCCCCCceECCC--ccch
Confidence            455555543  55555555555555555555555555     45555555555555555555665  8999988  9999


Q ss_pred             ccChHHHHHHHHhhCCCC
Q 026846           99 YIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        99 f~~~~~l~~H~~~~h~~~  116 (232)
                      |.+...|..|++..|.+.
T Consensus        75 f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           75 FSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             BSSHHHHHHHHHHTSCCC
T ss_pred             hCCHHHHHHHHHHhcCCC
Confidence            999999999998778764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.76  E-value=2.4e-19  Score=132.58  Aligned_cols=86  Identities=21%  Similarity=0.357  Sum_probs=81.4

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCC--CccccCCCCCcccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATP--PERITKTPKPPAGV   78 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~--c~~~~~~~~~l~~H   78 (232)
                      +|++.|.....|..|+++|+++++|.|.++.|++.|.+...|.+|+++|++.+||.|     ..  |++.|.....|..|
T Consensus        67 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C-----~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           67 REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC-----EFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCC-----SSTTCCCCBSSHHHHHHS
T ss_pred             CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccC-----CCCCCCCccCCHHHHHHH
Confidence            589999999999999999999999999755699999999999999999999999998     65  99999999999999


Q ss_pred             cccCCCCCCccCC
Q 026846           79 YGSASSERPYACP   91 (232)
Q Consensus        79 ~~~H~~~k~~~C~   91 (232)
                      +++|++++||.|.
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            9999999999994

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.76  E-value=2.1e-18  Score=117.91  Aligned_cols=86  Identities=23%  Similarity=0.487  Sum_probs=55.0

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccCh
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHE  102 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~  102 (232)
                      ++|.|.++.|++.|.....|..|++.|++.++|.|..   ..|++.|.....|..|+++|++++||.|..  |++.|.+.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~   88 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW---EGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRS   88 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCS---SSCCCEESSHHHHHHHHHHHTSCCSCBCSS--SCCBCSSH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCC---CCCCCccCCHHHHHHHHHHhCCCCCeECCC--CcCccCCH
Confidence            4455544445555555555555555555555554410   135555555555555555557789999988  99999999


Q ss_pred             HHHHHHHHhhC
Q 026846          103 YKLKLHLKREH  113 (232)
Q Consensus       103 ~~l~~H~~~~h  113 (232)
                      ..|..|+++|+
T Consensus        89 ~~l~~H~~~H~   99 (100)
T 2ebt_A           89 DHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999999864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=1.3e-18  Score=114.59  Aligned_cols=76  Identities=29%  Similarity=0.577  Sum_probs=66.5

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|.+.+||.|.+  |++.|.++..|..|++.|+                              
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~------------------------------   53 (82)
T 2kmk_A            6 ICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHT------------------------------   53 (82)
T ss_dssp             SSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHH------------------------------
T ss_pred             CCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhc------------------------------
Confidence            58888888888888888888888888865  8888888888888888885                              


Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                         ++++|.|..  |++.|.+...|..|+++|+
T Consensus        54 ---~~~~~~C~~--C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           54 ---GEKPHKCQV--CGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             ---TCCCEECTT--TSCEESSHHHHHHHHHHHC
T ss_pred             ---CCCCCcCCC--cchhhCChHHHHHHHHhhC
Confidence               578899987  9999999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=4.9e-19  Score=122.54  Aligned_cols=83  Identities=17%  Similarity=0.177  Sum_probs=79.9

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|.+|+++|.++++|.|.+  |++.|.....|..|+++|++.++|.|     ..|++.|.....|..|++
T Consensus        22 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           22 FCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKC-----QECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             SSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSC-----SSSCCCCSSHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeEC-----CCcCCcccCHHHHHHHHH
Confidence            59999999999999999999999999975  99999999999999999999999999     889999999999999999


Q ss_pred             cCCCCCCccC
Q 026846           81 SASSERPYAC   90 (232)
Q Consensus        81 ~H~~~k~~~C   90 (232)
                      +|.+++||.+
T Consensus        95 ~H~~~~~~~~  104 (106)
T 2ee8_A           95 LHMQTSSPTA  104 (106)
T ss_dssp             HTTSCCCCCC
T ss_pred             HhCCCCCCcC
Confidence            9999999976

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.75  E-value=3.7e-19  Score=125.58  Aligned_cols=92  Identities=21%  Similarity=0.354  Sum_probs=83.4

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKA   98 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~   98 (232)
                      +++++||.|.++.|++.|.+...|..|++.|++.+||.|..   ..|++.|.....|..|+++|.+.++|.|..  |+++
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~   75 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF---KDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRK   75 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCS---TTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCE
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCC---CCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCch
Confidence            36789999986679999999999999999999999999821   279999999999999999999999999988  9999


Q ss_pred             ccChHHHHHHHHhhCCC
Q 026846           99 YIHEYKLKLHLKREHPG  115 (232)
Q Consensus        99 f~~~~~l~~H~~~~h~~  115 (232)
                      |.....|..|+++|+..
T Consensus        76 f~~~~~l~~H~~~h~~~   92 (119)
T 2jp9_A           76 FSRSDHLKTHTRTHTGE   92 (119)
T ss_dssp             ESCHHHHHHHHHHHHTC
T ss_pred             hCCHHHHHHHHHHhcCC
Confidence            99999999999986543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=2.3e-18  Score=115.17  Aligned_cols=76  Identities=29%  Similarity=0.673  Sum_probs=57.6

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~   81 (232)
                      |++.|.....|..|+++|.+.++|.|.+..|++.|.+...|..|++.|                                
T Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------------------------   60 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH--------------------------------   60 (89)
T ss_dssp             TCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH--------------------------------
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc--------------------------------
Confidence            666777777777777677666677775334777777777777776666                                


Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhh
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                       ++++||.|..  |++.|.....|..|+++|
T Consensus        61 -~~~~~~~C~~--C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           61 -TGHRPFQCQK--CDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             -HCCCCEECSS--SSCEESSHHHHHHHGGGG
T ss_pred             -CCCCCccCCC--CCcccCCHHHHHHHHHhh
Confidence             5678999987  999999999999999874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.72  E-value=1.6e-18  Score=116.28  Aligned_cols=79  Identities=15%  Similarity=0.187  Sum_probs=74.3

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      .|++.|.....|..|+++|.+.++|.|.+  |++.|.+...|..|+++|++.+||.|     ..|++.|.....|..|++
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~   83 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC-----DICGRKFARSDERKRHTK   83 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEEC-----TTTCCEESSHHHHHHHHG
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccC-----CCCCchhCCHHHHHHHHH
Confidence            39999999999999999999999999975  99999999999999999999999999     889999999999999999


Q ss_pred             cCCCCC
Q 026846           81 SASSER   86 (232)
Q Consensus        81 ~H~~~k   86 (232)
                      +|++++
T Consensus        84 ~H~~~k   89 (90)
T 1a1h_A           84 IHLRQK   89 (90)
T ss_dssp             GGGC--
T ss_pred             HhcccC
Confidence            999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.71  E-value=5e-18  Score=120.72  Aligned_cols=85  Identities=18%  Similarity=0.267  Sum_probs=74.2

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|++++||.|.+..|++.|.+...|..|+++|++.+||.|..   ..|++.|.....|..|++
T Consensus        39 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           39 ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF---DGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCS---TTCCCCCSSTTTTHHHHH
T ss_pred             CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCC---CCCCCccCCHHHHHHHHH
Confidence            59999999999999999999999999975569999999999999999999999999821   249999999999999999


Q ss_pred             cCCCCCCc
Q 026846           81 SASSERPY   88 (232)
Q Consensus        81 ~H~~~k~~   88 (232)
                      +|++++++
T Consensus       116 ~H~~~k~~  123 (124)
T 1ubd_C          116 THAKAKNN  123 (124)
T ss_dssp             HHC-----
T ss_pred             HHcccccC
Confidence            99999876

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=4e-18  Score=115.73  Aligned_cols=82  Identities=16%  Similarity=0.177  Sum_probs=77.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|.+.++|.|.+  |++.|.....|..|++.|++.++|.|     ..|++.|.....|..|++
T Consensus        13 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A           13 VCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKC-----QICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             TTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEEC-----SSSSCEESSHHHHHHHHT
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccC-----CCCCCccCCHHHHHHHHH
Confidence            69999999999999999999999999975  99999999999999999999999999     889999999999999999


Q ss_pred             cCCCCCCcc
Q 026846           81 SASSERPYA   89 (232)
Q Consensus        81 ~H~~~k~~~   89 (232)
                      +|+++++..
T Consensus        86 ~h~~~~~p~   94 (96)
T 2dmd_A           86 SHTGDSGPS   94 (96)
T ss_dssp             TCCSCCCCC
T ss_pred             HhcCCCCCC
Confidence            999987654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=1.1e-17  Score=103.41  Aligned_cols=57  Identities=33%  Similarity=0.692  Sum_probs=51.3

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      ||||+|.+  |+++|.++..|..|+++|+                                 |++||.|..  ||++|.+
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht---------------------------------~ekp~~C~~--C~k~F~~   44 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHL---------------------------------GYRPRSCPE--CGKCFRD   44 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHH---------------------------------TCCCEECTT--TCCEESS
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhC---------------------------------CCcCeECCC--CCCCcCC
Confidence            79999975  9999999999999999995                                 578899987  9999999


Q ss_pred             hHHHHHHHHhhCCCC
Q 026846          102 EYKLKLHLKREHPGH  116 (232)
Q Consensus       102 ~~~l~~H~~~~h~~~  116 (232)
                      .+.|..|+++ |.+.
T Consensus        45 ~~~L~~H~~~-Htge   58 (60)
T 4gzn_C           45 QSEVNRHLKV-HQNK   58 (60)
T ss_dssp             HHHHHHHGGG-GSCC
T ss_pred             HHHHHHHhCc-cCCC
Confidence            9999999987 5543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.7e-18  Score=112.33  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             cCCCcccCCCCCCCccccchhhHHHHHH-HhcCCCCCccCCcCCCC--CccccCCCCCcccccccCCCCCCccCCccccc
Q 026846           20 SQENYHICPYPDCGKRYAHEYKLKNHIA-SHHEKNAAVEVPRYATP--PERITKTPKPPAGVYGSASSERPYACPYEGCE   96 (232)
Q Consensus        20 ~~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~~~~~~--c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~   96 (232)
                      +++++|.|.++.|++.|.++..|..|++ .|++.+||.|     ..  |++.|.....|..|+++|++++||.|.+  |+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C-----~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~   75 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSC-----PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF--SG   75 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEEC-----SCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS--SS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeEC-----CCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC--CC
Confidence            3556666655556666666666666666 4666666665     44  6666666666666666667789999987  99


Q ss_pred             cccc
Q 026846           97 KAYI  100 (232)
Q Consensus        97 k~f~  100 (232)
                      ++|.
T Consensus        76 k~F~   79 (79)
T 2dlk_A           76 PSSG   79 (79)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9985

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=9.1e-18  Score=116.41  Aligned_cols=82  Identities=16%  Similarity=0.097  Sum_probs=77.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|.  +||.|.+  |++.|.....|..|++ |++.+||.|     ..|++.|.....|..|++
T Consensus        21 ~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C-----~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           21 LCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTC-----LECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             TTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEE-----GGGTEECSSHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccC-----ccccchhCCHHHHHHHHH
Confidence            69999999999999999994  7999975  9999999999999996 999999999     789999999999999997


Q ss_pred             -cCCCCCCccCCc
Q 026846           81 -SASSERPYACPY   92 (232)
Q Consensus        81 -~H~~~k~~~C~~   92 (232)
                       +|++++||.|..
T Consensus        91 ~~H~~~~~~~~~~  103 (107)
T 1wjp_A           91 EVHNQNNMAPTSG  103 (107)
T ss_dssp             HTSCCCCCCCCCC
T ss_pred             HHcCCCCCCCCCC
Confidence             999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.3e-17  Score=114.78  Aligned_cols=87  Identities=20%  Similarity=0.325  Sum_probs=80.4

Q ss_pred             cCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc---CCCCCCccCCccccc
Q 026846           20 SQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS---ASSERPYACPYEGCE   96 (232)
Q Consensus        20 ~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~---H~~~k~~~C~~~~C~   96 (232)
                      +|.++|.|.+  |++.|.....|..|++.|++.+||.|     ..|++.|.....|..|++.   |.+.++|.|.+  |+
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~   73 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFEC-----PKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQ   73 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBC-----TTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SC
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeEC-----CCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CC
Confidence            5789999975  99999999999999999999999999     8899999999999999984   68899999988  99


Q ss_pred             ccccChHHHHHHHHhhCCC
Q 026846           97 KAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        97 k~f~~~~~l~~H~~~~h~~  115 (232)
                      +.|.....|..|+++|+..
T Consensus        74 ~~f~~~~~l~~H~~~h~~~   92 (124)
T 2dlq_A           74 ETFRRRMELRLHMVSHTGE   92 (124)
T ss_dssp             CEESSHHHHHHHHHHHSSS
T ss_pred             CccCCHHHHHHHHHHcCCC
Confidence            9999999999999986543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=1e-16  Score=106.04  Aligned_cols=77  Identities=26%  Similarity=0.368  Sum_probs=64.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|.+++||.|.++.|+++|.+...|..|+++|+                              
T Consensus         8 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~------------------------------   57 (85)
T 2j7j_A            8 NCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA------------------------------   57 (85)
T ss_dssp             TCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH------------------------------
T ss_pred             CCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC------------------------------
Confidence            48899999999999999999999999964449999999999999998885                              


Q ss_pred             cCCCCCCccCCccc-ccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEG-CEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~-C~k~f~~~~~l~~H~~~~h  113 (232)
                         +   |.|.... |++.|.....|..|+++||
T Consensus        58 ---~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           58 ---G---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ---S---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ---C---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence               2   6674322 9999999999999999865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=1.3e-17  Score=111.53  Aligned_cols=77  Identities=25%  Similarity=0.370  Sum_probs=60.3

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      +|++.|.....|..|+++|++++||.|.+  |+++|.....|..|+++|+                              
T Consensus         8 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~------------------------------   55 (88)
T 1llm_C            8 ICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQH------------------------------   55 (88)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHT------------------------------
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhC------------------------------
Confidence            47777777777777777777777777754  7777777777777777763                              


Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                          .++|.|..  |++.|.....|..|++.+|..
T Consensus        56 ----~~~~~c~~--C~~~f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           56 ----ILPILEDK--VEELLSKNYHLENEVARLKKL   84 (88)
T ss_dssp             ----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCcchHHH--HHHHHHHHhhhHHHHHHHHHH
Confidence                37899977  999999999999999988753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=6.4e-17  Score=99.92  Aligned_cols=51  Identities=22%  Similarity=0.432  Sum_probs=47.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      +||+.|...+.|.+|+++|+|++||.|.+  |+++|.++.+|.+|+++|+|++
T Consensus         9 ~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            9 FCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             TTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            69999999999999999999999999975  9999999999999999998753

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=5.8e-17  Score=110.67  Aligned_cols=78  Identities=17%  Similarity=0.275  Sum_probs=67.7

Q ss_pred             cccCCChHHHHHHHHHhcCCCcccCCCCCCCcccc-chhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc
Q 026846            3 AVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYA-HEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         3 ~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~-~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~   81 (232)
                      ...+.....+.+|+++|+++++|+|.+  |++.|. .+..|.+|+++|++                              
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~------------------------------   50 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQK------------------------------   50 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHH------------------------------
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcC------------------------------
Confidence            345667778889999999999999975  999999 99999999999953                              


Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                        +++||.|.+  |++.|.+...|.+|+++||...
T Consensus        51 --~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           51 --LQDALKCQH--CRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             --HHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSC
T ss_pred             --CCCCEECCC--CCCccCCHHHHHHHHHHHcCCC
Confidence              167899988  9999999999999999977543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=7.7e-17  Score=109.09  Aligned_cols=79  Identities=22%  Similarity=0.331  Sum_probs=73.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC--CCCccCCcCCCCCccccCCCCCcccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK--NAAVEVPRYATPPERITKTPKPPAGV   78 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~c~~~~~~~c~~~~~~~~~l~~H   78 (232)
                      +|++.|.....|.+|+++|+++++|.|.+  |++.|.+...|..|++.|++.  ++|.|     ..|++.|.....|..|
T Consensus        12 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C-----~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A           12 ICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYIC-----QSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             SSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCC-----SSSCCCBSSHHHHHHH
T ss_pred             CCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceEC-----CCccchhCCHHHHHHH
Confidence            59999999999999999999999999975  999999999999999999987  89998     8899999999999999


Q ss_pred             cc-cCCCCC
Q 026846           79 YG-SASSER   86 (232)
Q Consensus        79 ~~-~H~~~k   86 (232)
                      ++ +|.+..
T Consensus        85 ~~~~H~~~~   93 (95)
T 2yt9_A           85 IKQVHSGPS   93 (95)
T ss_dssp             HHHTSCCCS
T ss_pred             HHHhcCCCC
Confidence            86 898753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=7.7e-18  Score=111.88  Aligned_cols=73  Identities=21%  Similarity=0.368  Sum_probs=58.2

Q ss_pred             HHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccC
Q 026846           11 NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYAC   90 (232)
Q Consensus        11 ~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C   90 (232)
                      .|.+|+++|++++||.|.+  |++.|.....|..|++.|+...                             ..+++|.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~-----------------------------~~~~~~~C   50 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN-----------------------------FVPAAFVC   50 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSS-----------------------------CCCCCEEC
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCc-----------------------------CCCcceEC
Confidence            3567999999999999975  9999999999999999875421                             01367888


Q ss_pred             CcccccccccChHHHHHHHHhhCCCC
Q 026846           91 PYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        91 ~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      ..  |++.|.+...|..|+++|+...
T Consensus        51 ~~--C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A           51 SK--CGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             SS--SCCEESCHHHHHHHHHHCCCCC
T ss_pred             CC--CCChhCCHHHHHHHHHHccCCC
Confidence            76  8888888888888888755543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.1e-17  Score=106.30  Aligned_cols=71  Identities=28%  Similarity=0.493  Sum_probs=61.7

Q ss_pred             HHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHH-hcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccC
Q 026846           12 LRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIAS-HHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYAC   90 (232)
Q Consensus        12 L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C   90 (232)
                      |.+|+++|++++||.|.+  |++.|.++..|..|++. |.+                                ..++|.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~--------------------------------~~~~~~C   48 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE--------------------------------NVAKFHC   48 (77)
T ss_dssp             CCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS--------------------------------SCSSEEC
T ss_pred             CCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCC--------------------------------CCCccCC
Confidence            457899999999999975  99999999999999984 532                                1489999


Q ss_pred             CcccccccccChHHHHHHHHhhCCCCCC
Q 026846           91 PYEGCEKAYIHEYKLKLHLKREHPGHMS  118 (232)
Q Consensus        91 ~~~~C~k~f~~~~~l~~H~~~~h~~~~~  118 (232)
                      .+  |++.|.+...|..|++++|....+
T Consensus        49 ~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           49 PH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             SS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            88  999999999999999999987654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.8e-16  Score=110.24  Aligned_cols=76  Identities=16%  Similarity=0.102  Sum_probs=72.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYG   80 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~   80 (232)
                      .|++.|.....|.+|+++|.+.++|.|.+  |++.|.+...|..|+++|++.++|.|     ..|++.|.....|..|++
T Consensus        14 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A           14 QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC-----NICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEEC-----SSSCCEESCHHHHHHHHH
T ss_pred             cCCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeC-----CCCcchhcCHHHHHHHHH
Confidence            59999999999999999999999999975  99999999999999999999999999     789999999999999998


Q ss_pred             cCC
Q 026846           81 SAS   83 (232)
Q Consensus        81 ~H~   83 (232)
                      +|.
T Consensus        87 ~~~   89 (110)
T 2csh_A           87 SCT   89 (110)
T ss_dssp             HHH
T ss_pred             Hcc
Confidence            774

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.3e-15  Score=101.46  Aligned_cols=73  Identities=16%  Similarity=0.257  Sum_probs=63.7

Q ss_pred             ccCCChHHHHHHHHHhcCCCcccCCCCCCCccc-cchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccC
Q 026846            4 VAFSLDFNLRSHMKTHSQENYHICPYPDCGKRY-AHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSA   82 (232)
Q Consensus         4 ~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H   82 (232)
                      ..|.....|..|+++|.+++||.|.+  |++.| .++..|..|+++| +                               
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~-------------------------------   59 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-K-------------------------------   59 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-C-------------------------------
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-C-------------------------------
Confidence            45677888999999999999999975  99999 9999999999988 5                               


Q ss_pred             CCCCCccCCcccccccccChHHHHHH-HHhhCCC
Q 026846           83 SSERPYACPYEGCEKAYIHEYKLKLH-LKREHPG  115 (232)
Q Consensus        83 ~~~k~~~C~~~~C~k~f~~~~~l~~H-~~~~h~~  115 (232)
                        ++||.|.+  |++.|.+...|..| +++ |.+
T Consensus        60 --~k~~~C~~--Cgk~F~~~~~L~~H~~~~-H~~   88 (96)
T 2ctd_A           60 --QEMFTCHH--CGKQLRSLAGMKYHVMAN-HNS   88 (96)
T ss_dssp             --CCCCCCSS--SCCCCSSHHHHHHHHHHH-TCC
T ss_pred             --CCCeECCC--CCCeeCCHHHHHHHhHHh-cCC
Confidence              57888877  99999999999999 655 654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.2e-15  Score=98.28  Aligned_cols=65  Identities=25%  Similarity=0.373  Sum_probs=59.8

Q ss_pred             CccccCCChHHHHHHHH-HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccC
Q 026846            1 MKAVAFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITK   70 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~-~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~   70 (232)
                      .|++.|.....|.+|++ +|++++||.|.++.|++.|.++..|.+|+++|++.+||.|     ..|++.|.
T Consensus        14 ~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C-----~~C~k~F~   79 (79)
T 2dlk_A           14 GCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC-----EFSGPSSG   79 (79)
T ss_dssp             TTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC-----CSSSCCCC
T ss_pred             CCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeC-----CCCCCCCC
Confidence            39999999999999999 7999999999754599999999999999999999999999     78888773

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.9e-16  Score=101.56  Aligned_cols=58  Identities=31%  Similarity=0.630  Sum_probs=46.0

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEK   97 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k   97 (232)
                      .+.+++||.|.+  |++.|.....|..|+++|++                                 .+||.|.+  |++
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~---------------------------------~~~~~C~~--C~~   54 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG---------------------------------EKPYKCDE--CGK   54 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCC---------------------------------SCSEECSS--SCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCC---------------------------------CcCeeCCC--CCC
Confidence            467889999975  99999999999999998854                                 56677766  777


Q ss_pred             cccChHHHHHHHHhh
Q 026846           98 AYIHEYKLKLHLKRE  112 (232)
Q Consensus        98 ~f~~~~~l~~H~~~~  112 (232)
                      .|.+...|..|+++|
T Consensus        55 ~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           55 AFIQRSHLIGHHRVH   69 (77)
T ss_dssp             EESSHHHHHHHGGGS
T ss_pred             ccCCHHHHHHHHHHh
Confidence            777777777777663

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=2.2e-15  Score=98.20  Aligned_cols=69  Identities=20%  Similarity=0.396  Sum_probs=59.6

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEK   97 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k   97 (232)
                      +|++++||+|.+  |++.|..+..|..|+++|++.                              .++++|.|.+  |++
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~------------------------------~~~~~~~C~~--C~k   46 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAET------------------------------VAALRFPCEF--CGK   46 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHH------------------------------TTTCCEECTT--TCC
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhcc------------------------------CCCcccCCCC--CCc
Confidence            489999999975  999999999999999999641                              1368999988  999


Q ss_pred             cccChHHHHHHHHhhCCCCCCCc
Q 026846           98 AYIHEYKLKLHLKREHPGHMSDE  120 (232)
Q Consensus        98 ~f~~~~~l~~H~~~~h~~~~~~~  120 (232)
                      .|.+...|..|++.+|.+..+..
T Consensus        47 ~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A           47 RFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             EESSHHHHHHHHHHTSTTTSSCC
T ss_pred             hhCCHHHHHHHHHHhCCCCCCCc
Confidence            99999999999988898766443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2.4e-15  Score=99.55  Aligned_cols=64  Identities=23%  Similarity=0.620  Sum_probs=56.3

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccc
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCE   96 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~   96 (232)
                      .++.+.++|.|.+  |++.|.++..|.+|+++|+                                 +++||.|.+  |+
T Consensus        21 ~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~---------------------------------~~k~~~C~~--C~   63 (85)
T 2lv2_A           21 GLSASAECHLCPV--CGESFASKGAQERHLRLLH---------------------------------AAQVFPCKY--CP   63 (85)
T ss_dssp             SSCCCCTTEECTT--SCCEESSHHHHHHHHHTTS---------------------------------CSSSEECTT--SS
T ss_pred             CCCCCCCCEECCC--CCCCcCcHHHHhhhhhhcc---------------------------------CCCccCCCC--CC
Confidence            4567788999975  9999999999999999984                                 578999988  99


Q ss_pred             ccccChHHHHHHHHhhCCCCC
Q 026846           97 KAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        97 k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      ++|.+...|.+|+++.|..+.
T Consensus        64 k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           64 ATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CEESSHHHHHHHHHTTCTTCC
T ss_pred             CEeCCHHHHHHhCcccCcCCC
Confidence            999999999999988887653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1e-15  Score=98.30  Aligned_cols=63  Identities=32%  Similarity=0.520  Sum_probs=56.6

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccc
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGC   95 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C   95 (232)
                      .++|++++||.|.+  |++.|.....|..|+++|+                                 +++||.|.+  |
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~---------------------------------~~~~~~C~~--C   48 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHT---------------------------------GEKPYKCLE--C   48 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGG---------------------------------CSCCEECSS--S
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcC---------------------------------CCCCeECCC--C
Confidence            45799999999975  9999999999999999985                                 478899988  9


Q ss_pred             cccccChHHHHHHHHhhCCC
Q 026846           96 EKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        96 ~k~f~~~~~l~~H~~~~h~~  115 (232)
                      ++.|.+...|.+|+++|+..
T Consensus        49 ~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           49 GKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCHHHHHHHHHhcCCC
Confidence            99999999999999997654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.57  E-value=4.4e-15  Score=106.17  Aligned_cols=72  Identities=21%  Similarity=0.372  Sum_probs=50.9

Q ss_pred             ccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCC
Q 026846            4 VAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSAS   83 (232)
Q Consensus         4 ~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~   83 (232)
                      +.|.....|..|+ .|++++||.|.+  |++.|..+..|..|+++|                                  
T Consensus        55 ~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H----------------------------------   97 (129)
T 2wbt_A           55 QLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT----------------------------------   97 (129)
T ss_dssp             GGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT----------------------------------
T ss_pred             cccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC----------------------------------
Confidence            3444555555554 456666666653  666666666666666655                                  


Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                       ++||.|..  |++.|.+...|..|+++||+.
T Consensus        98 -~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 -EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             -CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence             57899987  999999999999999997754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.6e-15  Score=95.59  Aligned_cols=64  Identities=25%  Similarity=0.531  Sum_probs=55.8

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccc
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGC   95 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C   95 (232)
                      +++|++++||.|.+  |++.|.+...|..|++.++.                               .+++||.|..  |
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~-------------------------------~~~~~~~C~~--C   46 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHK-------------------------------RNVKVYPCPF--C   46 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSS-------------------------------SSCCCEECTT--T
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcC-------------------------------CCCcCeECCC--C
Confidence            35799999999975  99999999999999998420                               3578999988  9


Q ss_pred             cccccChHHHHHHHHhhCC
Q 026846           96 EKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        96 ~k~f~~~~~l~~H~~~~h~  114 (232)
                      ++.|.+...|..|++++|+
T Consensus        47 ~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           47 FKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CCEESCHHHHHHHHHHHTC
T ss_pred             CCccCCHHHHHHHHHHHcC
Confidence            9999999999999999885

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=9e-16  Score=105.14  Aligned_cols=67  Identities=16%  Similarity=0.133  Sum_probs=48.3

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHH-h---cCCCCCccCCcCCCCCccccCCCCCcccc-cccCCCCCCccCCc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIAS-H---HEKNAAVEVPRYATPPERITKTPKPPAGV-YGSASSERPYACPY   92 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~-h---~~~~~~~c~~~~~~~c~~~~~~~~~l~~H-~~~H~~~k~~~C~~   92 (232)
                      -+|++||.|.+  |+++|.++..|..|++. |   ++.+||.|     ..|++.|.....|..| +++|+|++||.|.+
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C-----~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVC-----VECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEE-----TTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCC-----CCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            36899999975  99999999999999984 8   44556655     5566666666666666 55666666666644

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.3e-15  Score=93.15  Aligned_cols=62  Identities=24%  Similarity=0.456  Sum_probs=55.3

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEK   97 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k   97 (232)
                      .|++++||+|.+  |++.|.....|..|+++|+                                 +++||.|.+  |++
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~---------------------------------~~~~~~C~~--C~~   45 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHC---------------------------------TDRPFKCNY--CSF   45 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGC---------------------------------CSCSEECSS--SSC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcC---------------------------------CCCCEeCCC--CCC
Confidence            478899999975  9999999999999999884                                 578899988  999


Q ss_pred             cccChHHHHHHHHhhCCCC
Q 026846           98 AYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        98 ~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|.+...|..|+++||...
T Consensus        46 ~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A           46 DTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             EESSHHHHHHHHHHHHSSS
T ss_pred             ccCCHHHHHHHHHHHhCCC
Confidence            9999999999999977643

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=7.3e-15  Score=89.64  Aligned_cols=57  Identities=37%  Similarity=0.827  Sum_probs=48.3

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccccc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYI  100 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~  100 (232)
                      |++||.|.+  |++.|.+...|..|+++|+                                 +++||.|..  |+++|.
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~---------------------------------~~~~~~C~~--C~~~f~   43 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHT---------------------------------GEKPYKCEF--CEYAAA   43 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHH---------------------------------CCCCEECSS--SSCEES
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcC---------------------------------CCCCcCCCC--CcchhC
Confidence            578999975  9999999999999999995                                 478899987  999999


Q ss_pred             ChHHHHHHHHhhCC
Q 026846          101 HEYKLKLHLKREHP  114 (232)
Q Consensus       101 ~~~~l~~H~~~~h~  114 (232)
                      +...|..|+++||.
T Consensus        44 ~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           44 QKTSLRYHLERHHK   57 (57)
T ss_dssp             SHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.1e-14  Score=94.52  Aligned_cols=55  Identities=25%  Similarity=0.378  Sum_probs=50.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |++.|..+..|.+|+++|++.+||.|
T Consensus        23 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           23 ECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            59999999999999999999999999975  99999999999999999976655544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=4.9e-15  Score=95.21  Aligned_cols=67  Identities=19%  Similarity=0.560  Sum_probs=56.1

Q ss_pred             HHHHHHH-HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCcc
Q 026846           11 NLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYA   89 (232)
Q Consensus        11 ~L~~H~~-~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~   89 (232)
                      .|..|+. +|+++++|.|.+..|++.|..+..|..|+++|+                                 +.+||.
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~---------------------------------~~~~~~   51 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT---------------------------------GQKPFQ   51 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH---------------------------------CCCCEE
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC---------------------------------CCCCeE
Confidence            4455544 689999999975469999999999999999995                                 478899


Q ss_pred             CCcccccccccChHHHHHHHHhh
Q 026846           90 CPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        90 C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |.+  |++.|.+...|..|+++|
T Consensus        52 C~~--C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           52 CRI--CMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CTT--TCCEESCHHHHHHHHTTC
T ss_pred             CCC--CCchhCCHHHHHHHHHhc
Confidence            987  999999999999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.2e-15  Score=106.95  Aligned_cols=84  Identities=12%  Similarity=0.038  Sum_probs=75.9

Q ss_pred             CccccCCChHHHHHHHHH--hcCCCccc-CCCCCCCccc--cchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCc
Q 026846            1 MKAVAFSLDFNLRSHMKT--HSQENYHI-CPYPDCGKRY--AHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPP   75 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~--H~~~~p~~-C~~~~C~~~f--~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l   75 (232)
                      +|++.|.....|..|+++  |.+.+++. |.+  |++.|  ..+..|..|+++|++.+||.|     ..|++.|.....|
T Consensus        24 ~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C-----~~C~k~f~~~~~L   96 (115)
T 2dmi_A           24 DCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKC-----MYCGHSFESLQDL   96 (115)
T ss_dssp             SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBC-----SSSCCBCSSHHHH
T ss_pred             ccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceEC-----CCCCCccCCHHHH
Confidence            599999999999999999  88887765 975  99999  999999999999999999999     8999999999999


Q ss_pred             ccccccCCCCCCccCC
Q 026846           76 AGVYGSASSERPYACP   91 (232)
Q Consensus        76 ~~H~~~H~~~k~~~C~   91 (232)
                      ..|+++|.......++
T Consensus        97 ~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           97 SVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHTTTTTCSCCC
T ss_pred             HHHHHHhCCcccCCCC
Confidence            9999998877666554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=2.8e-14  Score=91.90  Aligned_cols=64  Identities=16%  Similarity=0.166  Sum_probs=49.5

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPY   88 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~   88 (232)
                      .+.++++|+|.+  |++.|.++..|..|+++|++.+||.|     ..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C-----~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRC-----NICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEEC-----TTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEEC-----CCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            456777788864  88888888888888888877777777     67788888878888888888888876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2e-16  Score=101.52  Aligned_cols=72  Identities=11%  Similarity=0.100  Sum_probs=65.0

Q ss_pred             ChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCC
Q 026846            8 LDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERP   87 (232)
Q Consensus         8 ~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~   87 (232)
                      ....|..|+++|++++||.|.+  |++.|.+...|..       .++|.|     ..|++.|.....|..|+++|++++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C-----~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMC-----EKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCC-----HHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCC-----CCCChhhcCHHHHHHHHHhhcCCCC
Confidence            3456788999999999999975  9999999999886       678888     7899999999999999999999999


Q ss_pred             ccCCcccc
Q 026846           88 YACPYEGC   95 (232)
Q Consensus        88 ~~C~~~~C   95 (232)
                      |.|.+  |
T Consensus        68 ~~C~~--C   73 (73)
T 2ctu_A           68 SGPSS--G   73 (73)
T ss_dssp             SSCCC--C
T ss_pred             CCCCC--C
Confidence            99976  7

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=6.4e-14  Score=90.21  Aligned_cols=52  Identities=27%  Similarity=0.424  Sum_probs=30.1

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |++.|.....|.+|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||
T Consensus        23 C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           23 CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            5555555555555555555555555543  555555555555555555555543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.3e-13  Score=84.84  Aligned_cols=57  Identities=32%  Similarity=0.718  Sum_probs=50.3

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccCh
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHE  102 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~  102 (232)
                      +||.|.+  |++.|.+...|..|+++|+                                 +++||.|..  |++.|.+.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~---------------------------------~~~~~~C~~--C~~~f~~~   43 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHT---------------------------------NEKPYPCGL--CNRAFTRR   43 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTT---------------------------------SSCSEECTT--TCCEESSH
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhC---------------------------------CCCCccCCC--CCCccCCH
Confidence            5899975  9999999999999999884                                 578899987  99999999


Q ss_pred             HHHHHHHHhhCCCC
Q 026846          103 YKLKLHLKREHPGH  116 (232)
Q Consensus       103 ~~l~~H~~~~h~~~  116 (232)
                      ..|..|++..|.+.
T Consensus        44 ~~l~~H~~~~H~~~   57 (60)
T 2adr_A           44 DLLIRHAQKIHSGN   57 (60)
T ss_dssp             HHHHHHHTTTSCCS
T ss_pred             HHHHHHHHHHcCCc
Confidence            99999986667664

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=1.9e-13  Score=83.18  Aligned_cols=55  Identities=35%  Similarity=0.676  Sum_probs=49.0

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~  103 (232)
                      ||.|.+  |++.|.+...|..|+++|+                                 +++||.|..  |++.|.+..
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~---------------------------------~~~~~~C~~--C~~~f~~~~   43 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHT---------------------------------DVRPYHCTY--CNFSFKTKG   43 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTS---------------------------------SCCCEECSS--SSCEESSHH
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcC---------------------------------CCCCccCCC--CCchhcCHH
Confidence            689975  9999999999999999984                                 578899987  999999999


Q ss_pred             HHHHHHHhhCCC
Q 026846          104 KLKLHLKREHPG  115 (232)
Q Consensus       104 ~l~~H~~~~h~~  115 (232)
                      .|..|+++|+..
T Consensus        44 ~l~~H~~~h~~~   55 (57)
T 1bbo_A           44 NLTKHMKSKAHS   55 (57)
T ss_dssp             HHHHHHHSSSSC
T ss_pred             HHHHHHHHhccc
Confidence            999999986554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.2e-13  Score=86.66  Aligned_cols=53  Identities=21%  Similarity=0.331  Sum_probs=49.8

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |++.|.++..|.+|+++|++.+|.
T Consensus        14 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           14 ECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999976  999999999999999999987664

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.39  E-value=3.6e-13  Score=81.92  Aligned_cols=50  Identities=20%  Similarity=0.377  Sum_probs=47.3

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++.|.....|..|+++|++++||.|.+  |++.|.+...|.+|+++|++.
T Consensus         6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            6 ECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence            59999999999999999999999999975  999999999999999999764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=2.3e-13  Score=89.94  Aligned_cols=49  Identities=18%  Similarity=0.334  Sum_probs=45.2

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHH-HhcC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIA-SHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~   51 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |+++|.++..|.+|++ .|.+
T Consensus        33 ~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           33 VCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             TSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence            69999999999999999999999999976  9999999999999975 5654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=4e-13  Score=85.89  Aligned_cols=60  Identities=35%  Similarity=0.804  Sum_probs=51.6

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccccc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKA   98 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~   98 (232)
                      +...++|.|.++.|++.|.....|..|+++|+                                 +++||.|.+..|++.
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~---------------------------------~~~~~~C~~~~C~k~   58 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT---------------------------------GEKPFSCSWKGCERR   58 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHS---------------------------------SSCSEECCCTTCCCE
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcC---------------------------------CCCCccCCCCCCCcc
Confidence            46678999976669999999999999999995                                 578888954459999


Q ss_pred             ccChHHHHHHHHh
Q 026846           99 YIHEYKLKLHLKR  111 (232)
Q Consensus        99 f~~~~~l~~H~~~  111 (232)
                      |.+...|.+|+++
T Consensus        59 f~~~~~l~~H~~~   71 (72)
T 2epa_A           59 FARSDELSRHRRT   71 (72)
T ss_dssp             ESSHHHHHHHTTT
T ss_pred             cCCHHHHHhHhhc
Confidence            9999999999876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2e-13  Score=93.44  Aligned_cols=56  Identities=13%  Similarity=0.062  Sum_probs=52.1

Q ss_pred             CccccCCChHHHHHHHH-Hh---cCCCcccCCCCCCCccccchhhHHHH-HHHhcCCCCCccC
Q 026846            1 MKAVAFSLDFNLRSHMK-TH---SQENYHICPYPDCGKRYAHEYKLKNH-IASHHEKNAAVEV   58 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~-~H---~~~~p~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~c~   58 (232)
                      +|++.|..+..|.+|++ +|   ++++||+|.+  |+++|..+..|..| +++|++++||.|.
T Consensus        23 ~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           23 YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            59999999999999998 59   6789999975  99999999999999 8999999999984

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.4e-14  Score=94.00  Aligned_cols=41  Identities=29%  Similarity=0.625  Sum_probs=36.8

Q ss_pred             CcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           74 PPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        74 ~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|..|+++|++++||.|.+  |++.|.....|..|++++|...
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~   42 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN   42 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSS
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCc
Confidence            3678999999999999988  9999999999999999877653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=7.7e-13  Score=89.15  Aligned_cols=53  Identities=30%  Similarity=0.443  Sum_probs=30.5

Q ss_pred             ccccCCChHHHHHHHHH-hcCCCc--------ccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846            2 KAVAFSLDFNLRSHMKT-HSQENY--------HICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~-H~~~~p--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |++.|.....|.+|+++ |.+.++        |.|.+  |++.|.++..|.+|+++|++.+||.
T Consensus        31 C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           31 CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCC
Confidence            56666666666666665 555555        56643  6666666666666666665443333

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.37  E-value=6.1e-13  Score=80.91  Aligned_cols=48  Identities=27%  Similarity=0.521  Sum_probs=46.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      +|++.|.....|..|+++|++++||.|.+  |++.|..+..|..|+++|+
T Consensus         9 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            9 YCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             TTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred             CCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence            59999999999999999999999999975  9999999999999999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=83.95  Aligned_cols=50  Identities=30%  Similarity=0.377  Sum_probs=47.6

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |++.|.++..|.+|+++|++.
T Consensus        19 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           19 ECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             SSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCC
Confidence            59999999999999999999999999975  999999999999999999865

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.7e-13  Score=91.05  Aligned_cols=54  Identities=19%  Similarity=0.313  Sum_probs=50.6

Q ss_pred             CccccCC-ChHHHHHHHHHhcC-CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846            1 MKAVAFS-LDFNLRSHMKTHSQ-ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus         1 ~C~~~f~-~~~~L~~H~~~H~~-~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|++.|. ....|.+|+++|++ ++||+|.+  |++.|.++..|.+|+++|++.+|+.
T Consensus        29 ~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           29 TCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCC
Confidence            6999999 99999999999999 99999976  9999999999999999999887764

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.32  E-value=3e-13  Score=81.57  Aligned_cols=51  Identities=16%  Similarity=0.187  Sum_probs=47.2

Q ss_pred             cccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846            3 AVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus         3 ~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|.|.....|..|+++|++++||.|.+  |++.|.++..|..|+++|++.+||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCC
Confidence            578999999999999999999999975  999999999999999999887765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.31  E-value=1.7e-12  Score=86.30  Aligned_cols=56  Identities=25%  Similarity=0.565  Sum_probs=50.9

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      ++||.|.+  |++.|.++..|..|+++|+                                 +++||.|..  |+++|..
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~---------------------------------~~~~~~C~~--C~k~f~~   43 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHT---------------------------------GEKPFACDI--CGRKFAR   43 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHH---------------------------------CCCCEECTT--TCCEESS
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcC---------------------------------CCCCccCCC--CCCccCC
Confidence            58999975  9999999999999999995                                 478899987  9999999


Q ss_pred             hHHHHHHHHhhCC
Q 026846          102 EYKLKLHLKREHP  114 (232)
Q Consensus       102 ~~~l~~H~~~~h~  114 (232)
                      ...|..|++++|.
T Consensus        44 ~~~L~~H~~~h~~   56 (88)
T 1llm_C           44 SDERKRHRDIQHI   56 (88)
T ss_dssp             HHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999873

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=3e-12  Score=86.76  Aligned_cols=49  Identities=22%  Similarity=0.337  Sum_probs=45.7

Q ss_pred             CccccC-CChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHH-HHHhcCC
Q 026846            1 MKAVAF-SLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNH-IASHHEK   52 (232)
Q Consensus         1 ~C~~~f-~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   52 (232)
                      +|++.| .....|..|+++| +++||.|.+  |+++|.++..|..| +++|++.
T Consensus        39 ~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           39 TCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             TTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCC
Confidence            599999 9999999999999 999999975  99999999999999 8888754

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.29  E-value=1.9e-12  Score=82.70  Aligned_cols=48  Identities=25%  Similarity=0.523  Sum_probs=45.3

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHh
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |++.|.....|.+|+++|++++||+|.++.|++.|..+..|.+|+++|
T Consensus        25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            999999999999999999999999997556999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.27  E-value=7.8e-13  Score=76.87  Aligned_cols=41  Identities=22%  Similarity=0.331  Sum_probs=35.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCC
Confidence            4788999999999975  9999999999999999996544433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.7e-12  Score=78.25  Aligned_cols=49  Identities=22%  Similarity=0.416  Sum_probs=45.5

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHH-HHhcC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHI-ASHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~-~~h~~   51 (232)
                      +|++.|.....|.+|+++|++++||.|.+  |++.|.++..|..|+ +.|.+
T Consensus         7 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            7 VCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             TTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             CCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            59999999999999999999999999975  999999999999997 56754

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=76.35  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=35.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCC
Confidence            4788999999999975  9999999999999999996544433

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.25  E-value=1.4e-12  Score=75.74  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=34.4

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCC
Confidence            778999999999975  9999999999999999996544433

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-12  Score=75.13  Aligned_cols=40  Identities=23%  Similarity=0.300  Sum_probs=34.3

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCC
Confidence            567899999999975  9999999999999999996544433

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=9.4e-13  Score=76.49  Aligned_cols=40  Identities=28%  Similarity=0.435  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCC
Confidence            4788999999999975  999999999999999999654433

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=9.5e-13  Score=76.46  Aligned_cols=41  Identities=27%  Similarity=0.461  Sum_probs=35.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |+++|.++..|..|+++|++.+||.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCC
Confidence            4788999999999975  9999999999999999996544433

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.25  E-value=9.7e-13  Score=76.43  Aligned_cols=41  Identities=17%  Similarity=0.223  Sum_probs=34.8

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcC
Confidence            4788999999999975  9999999999999999996544433

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=9.7e-13  Score=76.38  Aligned_cols=40  Identities=28%  Similarity=0.435  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-12  Score=75.86  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=35.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCC
Confidence            4788999999999975  9999999999999999996544433

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=75.54  Aligned_cols=40  Identities=25%  Similarity=0.414  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=75.58  Aligned_cols=40  Identities=20%  Similarity=0.351  Sum_probs=34.2

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCC
Confidence            4778999999999975  999999999999999998654333

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=75.55  Aligned_cols=41  Identities=22%  Similarity=0.304  Sum_probs=34.9

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCC
Confidence            4788999999999975  9999999999999999996544433

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=75.81  Aligned_cols=40  Identities=18%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            778999999999975  9999999999999999996544433

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.24  E-value=6e-12  Score=82.67  Aligned_cols=58  Identities=36%  Similarity=0.731  Sum_probs=50.2

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~  103 (232)
                      ||+|.|..|++.|.....|..|+++|+                                 +++||.|..++|+++|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~---------------------------------~~~~~~C~~~~C~~~f~~~~   47 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT---------------------------------QQLPYECPHEGCDKRFSLPS   47 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH---------------------------------TTCCEECCSTTCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC---------------------------------CCCCeeCCCCCCcCccCCHH
Confidence            689955569999999999999999996                                 46788885555999999999


Q ss_pred             HHHHHHHhhCC
Q 026846          104 KLKLHLKREHP  114 (232)
Q Consensus       104 ~l~~H~~~~h~  114 (232)
                      .|..|+++|+.
T Consensus        48 ~l~~H~~~h~~   58 (85)
T 2j7j_A           48 RLKRHEKVHAG   58 (85)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHhCC
Confidence            99999998765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.24  E-value=9.3e-13  Score=76.47  Aligned_cols=40  Identities=20%  Similarity=0.247  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=75.33  Aligned_cols=38  Identities=21%  Similarity=0.355  Sum_probs=33.3

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      |+++|++++||.|.+  |+++|.++..|.+|+++|++.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCC
Confidence            678999999999975  99999999999999999865433

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5e-12  Score=79.38  Aligned_cols=55  Identities=27%  Similarity=0.500  Sum_probs=48.0

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCC-cccccc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACP-YEGCEK   97 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~-~~~C~k   97 (232)
                      +.+++||+|.+  |+++|. +..|..|+++ +                                 +++||.|. .  ||+
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~---------------------------------~~~p~~C~~~--C~k   45 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-C---------------------------------PRLPVACPNQ--CGV   45 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-C---------------------------------SSSEEECTTC--CSC
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-c---------------------------------CCcCccCCcc--cCc
Confidence            35789999975  999999 9999999987 5                                 36888997 7  999


Q ss_pred             cccChHHHHHHHHhh
Q 026846           98 AYIHEYKLKLHLKRE  112 (232)
Q Consensus        98 ~f~~~~~l~~H~~~~  112 (232)
                      +|..+..|..|+++|
T Consensus        46 ~f~~~~~L~~H~~~h   60 (66)
T 2eod_A           46 GTVAREDLPGHLKDS   60 (66)
T ss_dssp             CEEETTTHHHHHHTT
T ss_pred             ccccHHHHHHHHHhh
Confidence            999999999999874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.24  E-value=1e-12  Score=76.33  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=35.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4788999999999975  99999999999999999975444433

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2e-12  Score=75.06  Aligned_cols=40  Identities=23%  Similarity=0.431  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=8.9e-13  Score=76.58  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4788999999999975  99999999999999999976544443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=75.37  Aligned_cols=40  Identities=25%  Similarity=0.371  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=1.7e-12  Score=87.49  Aligned_cols=60  Identities=18%  Similarity=0.262  Sum_probs=40.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHH-hcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccCh
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIAS-HHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHE  102 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~  102 (232)
                      .|+|.  .|++.|.....|.+|+++ |.+.++..+.                         .-++|.|..  |++.|...
T Consensus        25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~-------------------------~c~~~~C~~--C~k~f~~~   75 (95)
T 2ej4_A           25 SRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNH-------------------------VCYWEECPR--EGKSFKAK   75 (95)
T ss_dssp             SSSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCC-------------------------CCCCTTCSS--TTCCCSSH
T ss_pred             CCccc--ccccccCCHHHHHHHHHHhccCCCCCCcc-------------------------ceeccCCCC--CCcccCCH
Confidence            46675  499999999999999998 8765542210                         002266655  77777766


Q ss_pred             HHHHHHHHhh
Q 026846          103 YKLKLHLKRE  112 (232)
Q Consensus       103 ~~l~~H~~~~  112 (232)
                      ..|..|+++|
T Consensus        76 ~~L~~H~~~H   85 (95)
T 2ej4_A           76 YKLVNHIRVH   85 (95)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            6677776663

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=73.24  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=35.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            567899999999975  99999999999999999976655544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=75.12  Aligned_cols=39  Identities=21%  Similarity=0.353  Sum_probs=33.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |+++|++++||.|.+  |+++|.++..|.+|+++|++.+||
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCC
Confidence            678899999999975  999999999999999998654333

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.23  E-value=1.8e-12  Score=73.67  Aligned_cols=41  Identities=24%  Similarity=0.376  Sum_probs=35.5

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            567899999999975  99999999999999999976555544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-12  Score=75.56  Aligned_cols=39  Identities=26%  Similarity=0.378  Sum_probs=33.8

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      .|+++|++++||+|.+  |+++|.++..|.+|+++|++.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCC
Confidence            3788999999999975  99999999999999999865433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=74.98  Aligned_cols=40  Identities=25%  Similarity=0.353  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCC
Confidence            4778999999999975  999999999999999999654333

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=75.27  Aligned_cols=39  Identities=23%  Similarity=0.344  Sum_probs=33.7

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCC
Confidence            4778899999999975  99999999999999999865333

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.8e-12  Score=80.56  Aligned_cols=47  Identities=23%  Similarity=0.449  Sum_probs=45.0

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |++.|.....|.+|+++|.+++||.|.+  |++.|.++..|.+|+++|+
T Consensus        27 C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           27 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             BCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            9999999999999999999999999975  9999999999999999884

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=75.10  Aligned_cols=40  Identities=25%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |+++|++++||.|.+  |+++|.++..|..|+++|++.+||.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCC
Confidence            678899999999975  9999999999999999997544433

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.5e-12  Score=74.61  Aligned_cols=40  Identities=28%  Similarity=0.475  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=74.94  Aligned_cols=40  Identities=25%  Similarity=0.395  Sum_probs=34.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPS   41 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2e-12  Score=75.06  Aligned_cols=42  Identities=26%  Similarity=0.357  Sum_probs=35.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            4788999999999975  99999999999999999965444433

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2e-12  Score=75.04  Aligned_cols=39  Identities=21%  Similarity=0.322  Sum_probs=33.7

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCC
Confidence            678899999999975  999999999999999999654333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.2e-12  Score=76.11  Aligned_cols=40  Identities=23%  Similarity=0.424  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.3e-12  Score=75.83  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=35.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999975  99999999999999999965444433

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.6e-12  Score=75.44  Aligned_cols=42  Identities=19%  Similarity=0.280  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999975  99999999999999999976544433

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=74.81  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.3e-12  Score=75.81  Aligned_cols=40  Identities=28%  Similarity=0.416  Sum_probs=34.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.+...|..|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCS   41 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSS
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999998654333

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.22  E-value=2.2e-12  Score=74.85  Aligned_cols=40  Identities=23%  Similarity=0.313  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      .|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPS   41 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.6e-12  Score=75.49  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            4788999999999975  99999999999999999976544433

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=75.06  Aligned_cols=41  Identities=17%  Similarity=0.255  Sum_probs=34.9

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            678899999999975  99999999999999999976444433

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.9e-12  Score=74.33  Aligned_cols=40  Identities=23%  Similarity=0.339  Sum_probs=34.5

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      |+++|++++||+|.+  |+++|.++..|..|+++|++.+||.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCC
Confidence            678899999999975  9999999999999999996544433

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=74.44  Aligned_cols=40  Identities=28%  Similarity=0.476  Sum_probs=34.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.8e-12  Score=74.45  Aligned_cols=39  Identities=23%  Similarity=0.342  Sum_probs=33.8

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |+++|++++||.|.+  |+++|.++..|.+|+++|++.+||
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPS   41 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCC
Confidence            678899999999975  999999999999999999654333

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.3e-11  Score=77.30  Aligned_cols=49  Identities=20%  Similarity=0.407  Sum_probs=45.6

Q ss_pred             CccccCCChHHHHHHHHH-h-cCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846            1 MKAVAFSLDFNLRSHMKT-H-SQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~-H-~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +|++.|.....|.+|+++ | .+++||.|.+  |++.|.++..|..|++.|++
T Consensus        15 ~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           15 VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            599999999999999998 7 6999999975  99999999999999999864

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=74.67  Aligned_cols=40  Identities=23%  Similarity=0.379  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            4788999999999975  999999999999999999654333

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=74.69  Aligned_cols=40  Identities=25%  Similarity=0.378  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |++.|.++..|..|+++|++.+||
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCC
Confidence            4778999999999975  999999999999999999654433

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=6.8e-13  Score=88.37  Aligned_cols=59  Identities=15%  Similarity=0.167  Sum_probs=51.2

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASS   84 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~   84 (232)
                      |.++|++++||+|.+  |++.|.++..|..|+++|++.+||.|         +.+..+..|..|+++|.+
T Consensus        16 ~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C---------~~~~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRA---------KRQERRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHC---------CCCSCCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCccc---------chhhhHHHHHhhhccccc
Confidence            345799999999975  99999999999999999999999988         235677888889998887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.7e-12  Score=75.37  Aligned_cols=42  Identities=21%  Similarity=0.303  Sum_probs=35.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            4778999999999975  99999999999999999976444433

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.8e-12  Score=75.24  Aligned_cols=42  Identities=21%  Similarity=0.370  Sum_probs=36.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3e-12  Score=74.35  Aligned_cols=41  Identities=20%  Similarity=0.258  Sum_probs=36.1

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            778999999999975  99999999999999999976655554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.20  E-value=3.1e-12  Score=74.25  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=36.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=73.08  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=36.2

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            667899999999975  99999999999999999987666654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.1e-12  Score=74.99  Aligned_cols=42  Identities=24%  Similarity=0.329  Sum_probs=36.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.4e-12  Score=74.69  Aligned_cols=42  Identities=24%  Similarity=0.323  Sum_probs=36.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.20  E-value=3.6e-12  Score=73.97  Aligned_cols=41  Identities=20%  Similarity=0.277  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAV   56 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   56 (232)
                      +|+++|++++||+|.+  |++.|.++..|..|+++|++.+||.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCC
Confidence            3678899999999975  9999999999999999996544433

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.7e-12  Score=74.48  Aligned_cols=42  Identities=24%  Similarity=0.343  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.1e-12  Score=73.76  Aligned_cols=41  Identities=22%  Similarity=0.388  Sum_probs=35.1

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999975  99999999999999999965444433

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=74.03  Aligned_cols=41  Identities=17%  Similarity=0.208  Sum_probs=35.9

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999975  99999999999999999976655554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.3e-12  Score=74.82  Aligned_cols=39  Identities=23%  Similarity=0.432  Sum_probs=33.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |+++|++++||+|.+  |+++|.++..|.+|+++|++.+||
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPS   41 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSS
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCC
Confidence            678899999999975  999999999999999998654333

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.9e-12  Score=75.13  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=34.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            4788899999999975  999999999999999998654333

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.5e-12  Score=74.01  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=36.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            3778999999999975  99999999999999999976555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.3e-12  Score=74.08  Aligned_cols=42  Identities=21%  Similarity=0.348  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |+++|..+..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4788999999999975  99999999999999999976655544

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.8e-12  Score=74.44  Aligned_cols=42  Identities=26%  Similarity=0.418  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-12  Score=73.78  Aligned_cols=42  Identities=21%  Similarity=0.320  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.6e-12  Score=73.95  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=36.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=74.05  Aligned_cols=39  Identities=18%  Similarity=0.298  Sum_probs=33.7

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHH-HhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIA-SHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~   55 (232)
                      |+++|++++||.|.+  |+++|.++..|..|++ +|++.+||
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~   42 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPS   42 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSS
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCC
Confidence            778999999999975  9999999999999999 88654333

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.3e-11  Score=74.27  Aligned_cols=47  Identities=32%  Similarity=0.518  Sum_probs=40.6

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHH-HhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCccccc
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIA-SHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCE   96 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~   96 (232)
                      .|++++||.|.+  |++.|.++..|.+|++ +|                                 ++++||.|.+  |+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H---------------------------------~~~k~~~C~~--C~   48 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVH---------------------------------TSERPHKCQV--WV   48 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTS---------------------------------CCCCCCCSSS--SC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhc---------------------------------CCCCCccCCC--CC
Confidence            478899999975  9999999999999997 67                                 4578888977  99


Q ss_pred             ccccC
Q 026846           97 KAYIH  101 (232)
Q Consensus        97 k~f~~  101 (232)
                      +.|.+
T Consensus        49 k~F~~   53 (54)
T 2eps_A           49 SGPSS   53 (54)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            99875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.4e-12  Score=73.11  Aligned_cols=41  Identities=22%  Similarity=0.345  Sum_probs=35.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999975  99999999999999999976655544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=4e-12  Score=72.18  Aligned_cols=41  Identities=20%  Similarity=0.324  Sum_probs=35.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567899999999975  99999999999999999977665544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=3.3e-12  Score=72.58  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=35.4

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            667899999999975  99999999999999999976655544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.5e-12  Score=72.71  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=36.7

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999977665554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.2e-12  Score=73.68  Aligned_cols=42  Identities=19%  Similarity=0.322  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.8e-12  Score=73.36  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=36.7

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3788999999999975  99999999999999999987655555

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.1e-12  Score=72.90  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4788999999999975  99999999999999999976655544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=73.05  Aligned_cols=42  Identities=17%  Similarity=0.266  Sum_probs=36.4

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3778999999999975  99999999999999999976555544

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.4e-12  Score=74.06  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555444

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=73.80  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.6e-12  Score=73.98  Aligned_cols=41  Identities=24%  Similarity=0.309  Sum_probs=34.9

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            677899999999975  99999999999999999976444433

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.2e-12  Score=73.38  Aligned_cols=42  Identities=24%  Similarity=0.367  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3788999999999975  99999999999999999976655544

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.1e-12  Score=73.69  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCC
Confidence            4788999999999975  99999999999999999976555544

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.6e-12  Score=73.50  Aligned_cols=42  Identities=29%  Similarity=0.419  Sum_probs=35.8

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3778899999999975  99999999999999999976555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.2e-12  Score=73.66  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=36.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=73.41  Aligned_cols=42  Identities=21%  Similarity=0.371  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.8e-11  Score=79.34  Aligned_cols=52  Identities=19%  Similarity=0.364  Sum_probs=45.8

Q ss_pred             CccccCCChHHHHHHHHHhcC---CCcccCCCCCCCccccchhhHHHHHHH-hcCCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQ---ENYHICPYPDCGKRYAHEYKLKNHIAS-HHEKNA   54 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~---~~p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~   54 (232)
                      +|++.|.....|.+|+++|++   +++|.|.+  |++.|..+..|.+|++. |.+.++
T Consensus        12 ~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A           12 ICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             SSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            599999999999999999996   89999976  99999999999999965 544433

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.5e-12  Score=73.50  Aligned_cols=42  Identities=19%  Similarity=0.270  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.7e-12  Score=73.51  Aligned_cols=41  Identities=20%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||+|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            678899999999975  99999999999999999976555444

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.17  E-value=2.2e-11  Score=79.40  Aligned_cols=49  Identities=24%  Similarity=0.460  Sum_probs=46.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +|++.|.....|..|+++|++++||.|.+  |++.|.++..|..|+++|+|
T Consensus        34 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           34 YCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             SSCCEESSHHHHHHHHHHHHTCCCEECTT--TSCEESSHHHHHHHHHHHC-
T ss_pred             cCChhhCCHHHHHHHHHHhcCCCCCcCCC--cchhhCChHHHHHHHHhhCC
Confidence            59999999999999999999999999975  99999999999999999964

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.6e-12  Score=73.45  Aligned_cols=42  Identities=24%  Similarity=0.345  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4778999999999975  99999999999999999976555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=75.63  Aligned_cols=40  Identities=20%  Similarity=0.166  Sum_probs=35.3

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHH-HHhcCCCCCccC
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHI-ASHHEKNAAVEV   58 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~c~   58 (232)
                      ++|+|||+|.++.|+|+|.++.+|.+|+ ++|++.|||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            6899999998667999999999999998 689888888763

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.8e-12  Score=73.07  Aligned_cols=42  Identities=24%  Similarity=0.388  Sum_probs=36.9

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||+|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999987666555

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6e-12  Score=73.02  Aligned_cols=41  Identities=20%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            567899999999975  99999999999999999976555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.15  E-value=6.4e-13  Score=82.54  Aligned_cols=55  Identities=9%  Similarity=0.329  Sum_probs=45.0

Q ss_pred             HHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCC
Q 026846           12 LRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACP   91 (232)
Q Consensus        12 L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~   91 (232)
                      |..|+++|++++||+|.+  |+++|.+...|.   ++|                                 ++++||.|.
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H---------------------------------~~~k~~~C~   43 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFD---------------------------------PMTGTFRCT   43 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEE---------------------------------TTTTEEBCS
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhc---------------------------------CCCCCEECC
Confidence            456888999999999975  999999988886   556                                 567889997


Q ss_pred             cccccccccChHHHH
Q 026846           92 YEGCEKAYIHEYKLK  106 (232)
Q Consensus        92 ~~~C~k~f~~~~~l~  106 (232)
                      +  ||+.|....++.
T Consensus        44 ~--C~k~f~~~~~~~   56 (62)
T 1vd4_A           44 F--CHTEVEEDESAM   56 (62)
T ss_dssp             S--SCCBCEECTTCS
T ss_pred             C--CCCccccCcccc
Confidence            7  999998776543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2e-11  Score=76.52  Aligned_cols=49  Identities=18%  Similarity=0.236  Sum_probs=45.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCC-CCCCCccccchhhHHHHHHHhcCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICP-YPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      +|++.|. ...|..|+++ ++++||+|. .  |+++|..+..|..|+++|....
T Consensus        15 ~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A           15 YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             SSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSC
T ss_pred             ccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccC
Confidence            6999999 9999999999 999999996 5  9999999999999999986543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.9e-12  Score=73.37  Aligned_cols=42  Identities=21%  Similarity=0.378  Sum_probs=37.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999987666655

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.7e-12  Score=72.05  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4788999999999975  99999999999999999976555544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.1e-11  Score=71.22  Aligned_cols=41  Identities=22%  Similarity=0.344  Sum_probs=35.8

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            567899999999975  99999999999999999977665554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.2e-12  Score=72.81  Aligned_cols=41  Identities=24%  Similarity=0.494  Sum_probs=33.6

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |.++|++++||+|.++.|++.|.++..|..|+++|++.+||
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            45679999999997446999999999999999988654333

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.2e-12  Score=72.90  Aligned_cols=42  Identities=26%  Similarity=0.349  Sum_probs=36.1

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +|+++|++++||.|.+  |++.|..+..|.+|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999975  99999999999999999976555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.9e-12  Score=71.38  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4788999999999975  99999999999999999977666543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.6e-12  Score=72.74  Aligned_cols=42  Identities=21%  Similarity=0.395  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .|+++|++++||.|.+  |+++|.++..|..|+++|++.+||.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4778999999999975  99999999999999999976655554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.6e-12  Score=72.57  Aligned_cols=41  Identities=17%  Similarity=0.277  Sum_probs=35.5

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcC-CCCCcc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHE-KNAAVE   57 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~c   57 (232)
                      |+++|++++||.|.+  |+++|.++..|..|+++|++ .+||.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            678899999999975  99999999999999999976 555544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.11  E-value=8e-11  Score=79.76  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=74.4

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCccccccc
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGS   81 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~   81 (232)
                      |++.|.....|..|+++|.+.++|.|.+..|++.|.....|..|+++|++.+||.|     ..|++.|.....|..|+++
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-----~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC-----GVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC-----SSSCCBCSSHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC-----CCCcCccCCHHHHHHHHHH
Confidence            99999999999999999999999999755699999999999999999999999999     8899999999999999999


Q ss_pred             CCC
Q 026846           82 ASS   84 (232)
Q Consensus        82 H~~   84 (232)
                      |++
T Consensus        98 H~~  100 (100)
T 2ebt_A           98 HQN  100 (100)
T ss_dssp             HCC
T ss_pred             hCC
Confidence            974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=71.01  Aligned_cols=38  Identities=18%  Similarity=0.252  Sum_probs=32.3

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +++|++++||+|.+  |++.|.++..|.+|+++|++.+||
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCC
Confidence            46799999999975  999999999999999998654333

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.2e-11  Score=70.54  Aligned_cols=40  Identities=23%  Similarity=0.453  Sum_probs=33.7

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            46799999999975  99999999999999999976444433

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=7.3e-11  Score=67.97  Aligned_cols=33  Identities=30%  Similarity=0.608  Sum_probs=29.8

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++++||.|.+  |+++|.++..|.+|+++|++.
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   36 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   36 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCC
Confidence            589999999975  999999999999999999643

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.8e-11  Score=69.12  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=34.5

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      +++|++++||+|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            46799999999975  99999999999999999976555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5.1e-11  Score=67.14  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=33.5

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      ++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4689999999975  99999999999999999976655544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=8.2e-11  Score=68.79  Aligned_cols=32  Identities=28%  Similarity=0.544  Sum_probs=28.3

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      .|.+++||.|.+  |++.|.+...|.+|+++|++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSG   37 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCS
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCC
Confidence            367899999975  99999999999999998854

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=1.9e-10  Score=74.24  Aligned_cols=49  Identities=20%  Similarity=0.424  Sum_probs=44.5

Q ss_pred             CccccCCChHHHHHHHH-HhcCC-CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846            1 MKAVAFSLDFNLRSHMK-THSQE-NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~-~H~~~-~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +|++.|.....|.+|++ .|.+. ++|+|.+  |++.|.++..|..|++.|++
T Consensus        20 ~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           20 ICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             TTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCC
Confidence            59999999999999997 68875 8999975  99999999999999998753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1e-10  Score=66.74  Aligned_cols=39  Identities=23%  Similarity=0.417  Sum_probs=33.5

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      ++|++++||.|.+  |++.|.++..|.+|+++|++.+||.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4689999999975  99999999999999999976555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.04  E-value=1.2e-10  Score=69.86  Aligned_cols=46  Identities=26%  Similarity=0.461  Sum_probs=41.3

Q ss_pred             ccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           66 ERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        66 ~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++.|.....|..|+++|++++||.|..  |++.|.....|..|+++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhc
Confidence            467888888899999999999999988  9999999999999998854

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.04  E-value=1.6e-10  Score=76.48  Aligned_cols=46  Identities=20%  Similarity=0.392  Sum_probs=44.5

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHh
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |++.|.....|.+|+++|++++||.|.+  |++.|.+...|..|+++|
T Consensus        43 C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           43 CGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TCCEESSHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHGGGG
T ss_pred             CCCccCCHHHHHHHHHHcCCCCCccCCC--CCcccCCHHHHHHHHHhh
Confidence            9999999999999999999999999975  999999999999999988

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3e-11  Score=69.64  Aligned_cols=40  Identities=18%  Similarity=0.313  Sum_probs=34.1

Q ss_pred             HHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           16 MKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        16 ~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      .++|++++||.|.+  |++.|.++..|..|+++|++.+||.|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCC
Confidence            45789999999975  99999999999999999976555544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=7.9e-12  Score=80.62  Aligned_cols=66  Identities=21%  Similarity=0.298  Sum_probs=55.3

Q ss_pred             HHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCcc
Q 026846           10 FNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYA   89 (232)
Q Consensus        10 ~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~   89 (232)
                      ..|..|+++|.+++||.|.+  |++.|. ...|..|+ .|.                                 +.+||.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c---------------------------------~~~~~~   45 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYC---------------------------------GARTEL   45 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHH---------------------------------HHCEEE
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHc---------------------------------CCCceE
Confidence            45778988999999999986  999995 89999999 774                                 578899


Q ss_pred             CCcccccccccChHHHHHHHHhhCCCC
Q 026846           90 CPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        90 C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |..  |++.|.+ ..|..|+++ |.+.
T Consensus        46 C~~--C~~~~~~-~~l~~H~~~-c~~~   68 (75)
T 2d9k_A           46 CGN--CGRNVLV-KDLKTHPEV-CGRE   68 (75)
T ss_dssp             CSS--SCCEEET-TGGGTHHHH-BTTB
T ss_pred             ccc--CCCcCcH-HHHHHHHHH-ccCC
Confidence            977  9998874 899999987 5443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.01  E-value=3e-10  Score=80.76  Aligned_cols=48  Identities=23%  Similarity=0.560  Sum_probs=45.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++.|.....|.+|+++|  ++||.|.+  |+++|.++..|.+|+++|++.
T Consensus        79 ~C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           79 LCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            5999999999999999999  89999975  999999999999999999763

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.7e-10  Score=62.91  Aligned_cols=37  Identities=27%  Similarity=0.523  Sum_probs=33.2

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      |++++||.|.++.|+++|.++..|.+|+++|++.+||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6889999998556999999999999999999887765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.5e-10  Score=62.17  Aligned_cols=34  Identities=26%  Similarity=0.457  Sum_probs=30.4

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |++++||+|.++.|+++|.+++.|.+|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            6899999997556999999999999999999763

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.2e-12  Score=80.57  Aligned_cols=62  Identities=13%  Similarity=0.039  Sum_probs=55.4

Q ss_pred             chhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           38 HEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        38 ~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++..|..|+++|++.+||.|     ..|++.|.....|..       +++|.|..  |++.|.+...|..|+++|+
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C-----~~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKC-----SKCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEEC-----SSSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCC
T ss_pred             cchhHHHHHHHhCCCCCeeC-----CcccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhc
Confidence            35678889999999999999     889999999999887       78999987  9999999999999998843

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.93  E-value=6.2e-10  Score=61.85  Aligned_cols=37  Identities=16%  Similarity=0.414  Sum_probs=32.0

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |++++||.|.+  |++.|.++..|..|+++|++.+||.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            68899999975  99999999999999999987766644

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.7e-10  Score=62.51  Aligned_cols=36  Identities=25%  Similarity=0.539  Sum_probs=32.3

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      ++|++++||.|.+  |+++|.++..|..|+++|++.+|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4789999999975  99999999999999999987654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.91  E-value=1e-09  Score=60.08  Aligned_cols=35  Identities=29%  Similarity=0.697  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         1 ~H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhc
Confidence            4788999999999988  9999999999999998843

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.91  E-value=8.8e-11  Score=68.40  Aligned_cols=41  Identities=22%  Similarity=0.553  Sum_probs=35.0

Q ss_pred             HHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           12 LRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        12 L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +..|+..|++++||.|.|+.|+++|.++..|.+|+++|+++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34456679999999997556999999999999999999764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.88  E-value=4.6e-10  Score=61.51  Aligned_cols=35  Identities=17%  Similarity=0.333  Sum_probs=32.3

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |+++|++++||+|.+  |++.|.++..|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhcc
Confidence            678899999999975  99999999999999999965

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.3e-09  Score=60.39  Aligned_cols=36  Identities=28%  Similarity=0.571  Sum_probs=31.8

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |+++|++++||.|.+  |+++|.+...|..|+++ |.+.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   36 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKM-HTVK   36 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHH-TSCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHH-hCCC
Confidence            678899999999988  99999999999999988 5443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.85  E-value=1.3e-09  Score=58.74  Aligned_cols=35  Identities=23%  Similarity=0.471  Sum_probs=31.1

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      +|++++||.|.+  |+++|.++..|..|+++|++.+|
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            478999999975  99999999999999999987543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.9e-09  Score=62.17  Aligned_cols=37  Identities=38%  Similarity=0.577  Sum_probs=32.9

Q ss_pred             ccccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           76 AGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        76 ~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      ++|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         1 ~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFR   37 (46)
T ss_dssp             CCCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcC
Confidence            36899999999999988  99999999999999988543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.85  E-value=2.3e-09  Score=60.43  Aligned_cols=34  Identities=29%  Similarity=0.522  Sum_probs=30.9

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   34 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHA   34 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcC
Confidence            678899999999987  9999999999999998844

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.8e-09  Score=61.41  Aligned_cols=38  Identities=32%  Similarity=0.594  Sum_probs=33.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~k   39 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRV-HTGER   39 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHH-CSSCC
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHH-hCCCC
Confidence            5889999999999988  99999999999999988 54433

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=3.4e-09  Score=60.47  Aligned_cols=35  Identities=34%  Similarity=0.586  Sum_probs=32.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHA   36 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhc
Confidence            5889999999999988  9999999999999998844

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=3e-09  Score=61.28  Aligned_cols=37  Identities=32%  Similarity=0.610  Sum_probs=32.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRI-HTGE   38 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTT-TSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHH-hCCC
Confidence            5889999999999988  99999999999999987 4443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.84  E-value=1.5e-09  Score=58.56  Aligned_cols=35  Identities=14%  Similarity=0.338  Sum_probs=31.2

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      +|++++||.|.+  |++.|.++..|.+|+++|++.+|
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            488999999975  99999999999999999987543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.9e-09  Score=61.35  Aligned_cols=37  Identities=32%  Similarity=0.537  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKI-HTKQ   38 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHH-TSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHH-cCCC
Confidence            5888999999999987  99999999999999987 4443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=3.5e-09  Score=60.98  Aligned_cols=35  Identities=31%  Similarity=0.602  Sum_probs=32.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhC
Confidence            5889999999999988  9999999999999998844

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.5e-09  Score=60.99  Aligned_cols=36  Identities=28%  Similarity=0.482  Sum_probs=32.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTG   37 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCC
Confidence            5889999999999988  99999999999999988543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=3.7e-09  Score=65.71  Aligned_cols=41  Identities=32%  Similarity=0.530  Sum_probs=34.3

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhCCCCCCCccc
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENA  122 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~~~~~  122 (232)
                      ++|+|||+|.+++|+|+|.+.++|.+|+++.|.+.++....
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            57999999976679999999999999986668887765543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4e-09  Score=60.72  Aligned_cols=36  Identities=31%  Similarity=0.578  Sum_probs=32.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTG   37 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCC
Confidence            5889999999999988  99999999999999988543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.8e-09  Score=60.78  Aligned_cols=37  Identities=22%  Similarity=0.522  Sum_probs=32.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERT-HARK   38 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHH-CCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHh-cCCC
Confidence            5889999999999988  99999999999999988 5443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.6e-09  Score=64.89  Aligned_cols=37  Identities=24%  Similarity=0.262  Sum_probs=34.1

Q ss_pred             CccccCCChHHHHHHHH-HhcCCCcccCCCCCCCccccch
Q 026846            1 MKAVAFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHE   39 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~-~H~~~~p~~C~~~~C~~~f~~~   39 (232)
                      +|++.|.....|.+|++ +|++++||+|.+  |+++|.++
T Consensus        17 ~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~~   54 (54)
T 2eps_A           17 SCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSSG   54 (54)
T ss_dssp             SSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCCC
T ss_pred             CCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCCC
Confidence            59999999999999997 899999999975  99999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.5e-09  Score=61.01  Aligned_cols=36  Identities=28%  Similarity=0.575  Sum_probs=32.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTC
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCC
Confidence            5889999999999988  99999999999999988543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.1e-09  Score=60.60  Aligned_cols=37  Identities=38%  Similarity=0.796  Sum_probs=32.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   37 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRV-HTGS   37 (42)
T ss_dssp             CCCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGG-TSCC
T ss_pred             CCccccCCCCCeeCCC--ccchhCCHHHHHHHHHH-hCCC
Confidence            4788999999999987  99999999999999987 4443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.2e-09  Score=61.12  Aligned_cols=37  Identities=27%  Similarity=0.451  Sum_probs=32.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERL-HSGE   38 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHH-CCSS
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHh-cCCC
Confidence            5888999999999987  99999999999999987 4443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3e-09  Score=61.25  Aligned_cols=37  Identities=30%  Similarity=0.563  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGI-HTGE   38 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTT-TTTS
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHh-hCCC
Confidence            5888999999999987  99999999999999987 4443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.83  E-value=3.4e-09  Score=61.05  Aligned_cols=36  Identities=28%  Similarity=0.497  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTG   37 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSS
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCC
Confidence            5888999999999987  99999999999999988543

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.1e-09  Score=60.52  Aligned_cols=37  Identities=32%  Similarity=0.679  Sum_probs=32.9

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRT-HTGE   38 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHH-TTTS
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHH-hCCC
Confidence            5889999999999988  99999999999999988 4443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3e-09  Score=61.27  Aligned_cols=36  Identities=31%  Similarity=0.627  Sum_probs=32.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQ   37 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCC
Confidence            5889999999999988  99999999999999988543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.83  E-value=3.8e-09  Score=60.82  Aligned_cols=35  Identities=23%  Similarity=0.491  Sum_probs=32.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhC
Confidence            5889999999999988  9999999999999998854

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.7e-09  Score=61.43  Aligned_cols=37  Identities=35%  Similarity=0.620  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKI-HTGE   38 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTT-TTTS
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHH-cCCC
Confidence            5888999999999987  99999999999999987 4443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.4e-09  Score=61.04  Aligned_cols=37  Identities=32%  Similarity=0.586  Sum_probs=32.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKT-HSGQ   38 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTT-SSSS
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHH-cCCC
Confidence            5899999999999988  99999999999999987 4443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.6e-09  Score=60.89  Aligned_cols=37  Identities=24%  Similarity=0.523  Sum_probs=32.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMV-HTAE   38 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHH-TTCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHH-cCCC
Confidence            5888999999999987  99999999999999887 4443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.7e-09  Score=60.46  Aligned_cols=35  Identities=26%  Similarity=0.520  Sum_probs=31.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHT   36 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGT
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcC
Confidence            5888999999999987  9999999999999998743

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.82  E-value=3.3e-09  Score=61.04  Aligned_cols=37  Identities=27%  Similarity=0.596  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRS-HTGV   38 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGG-SSSC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHH-hCCC
Confidence            5888899999999987  99999999999999887 4443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.3e-09  Score=61.09  Aligned_cols=37  Identities=30%  Similarity=0.696  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQI-HTGE   38 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHT-TSSC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999987 4443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.5e-09  Score=60.49  Aligned_cols=35  Identities=29%  Similarity=0.515  Sum_probs=31.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHT   36 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcC
Confidence            5888999999999987  9999999999999998743

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.5e-09  Score=60.94  Aligned_cols=37  Identities=27%  Similarity=0.543  Sum_probs=31.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRI-HTGE   38 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTT-TTTS
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHH-cCCC
Confidence            5888899999999987  99999999999999887 4443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.5e-09  Score=60.94  Aligned_cols=35  Identities=31%  Similarity=0.649  Sum_probs=31.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|.+  |+++|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHS   36 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhc
Confidence            5888999999999987  9999999999999998844

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.6e-09  Score=60.89  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=30.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTS
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcC
Confidence            5788889999999977  9999999999999988743

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.9e-09  Score=61.38  Aligned_cols=35  Identities=23%  Similarity=0.460  Sum_probs=31.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHT   36 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTS
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhC
Confidence            5888999999999987  9999999999999998743

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.8e-09  Score=60.35  Aligned_cols=35  Identities=29%  Similarity=0.647  Sum_probs=31.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHT   36 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhC
Confidence            5888999999999987  9999999999999998844

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.7e-09  Score=60.82  Aligned_cols=36  Identities=28%  Similarity=0.455  Sum_probs=32.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTG   37 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCC
Confidence            5888999999999988  99999999999999988543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.82  E-value=3.3e-09  Score=61.09  Aligned_cols=35  Identities=20%  Similarity=0.418  Sum_probs=30.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHV   36 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGS
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcC
Confidence            5888899999999977  9999999999999988743

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.7e-09  Score=60.36  Aligned_cols=36  Identities=28%  Similarity=0.512  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSG   37 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCC
Confidence            5889999999999988  99999999999999988543

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.2e-09  Score=60.60  Aligned_cols=36  Identities=28%  Similarity=0.601  Sum_probs=31.9

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTG   37 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCC
Confidence            5888999999999987  99999999999999988543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.8e-09  Score=60.79  Aligned_cols=37  Identities=27%  Similarity=0.531  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRT-HVDD   38 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHH-CCSC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999987 5443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.81  E-value=2.9e-09  Score=58.38  Aligned_cols=35  Identities=29%  Similarity=0.618  Sum_probs=31.1

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      .|++++||.|.++.|++.|.++..|.+|+++|++.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37899999997556999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.6e-09  Score=60.94  Aligned_cols=37  Identities=30%  Similarity=0.574  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGI-HTGE   38 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTT-TSCS
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHh-cCCC
Confidence            5888999999999988  99999999999999887 4443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.81  E-value=4e-09  Score=60.76  Aligned_cols=35  Identities=26%  Similarity=0.517  Sum_probs=30.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHT   36 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHS
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcC
Confidence            5788889999999977  9999999999999988754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.3e-09  Score=60.59  Aligned_cols=37  Identities=32%  Similarity=0.571  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVI-HTGE   38 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTT-TCCS
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999987 4443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.81  E-value=3.3e-09  Score=61.05  Aligned_cols=35  Identities=26%  Similarity=0.451  Sum_probs=31.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|..  |+++|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHT   36 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGG
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcC
Confidence            5888999999999987  9999999999999998854

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3.6e-09  Score=60.31  Aligned_cols=34  Identities=29%  Similarity=0.591  Sum_probs=30.7

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   34 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHA   34 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhC
Confidence            678899999999988  9999999999999998854

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4e-09  Score=60.70  Aligned_cols=35  Identities=29%  Similarity=0.572  Sum_probs=31.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHT   36 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTS
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhC
Confidence            5888999999999987  9999999999999998743

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.5e-09  Score=60.27  Aligned_cols=37  Identities=30%  Similarity=0.591  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRT-HTGE   38 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTT-TCCS
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhh-cCCC
Confidence            5888999999999988  99999999999999987 4443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.8e-09  Score=60.80  Aligned_cols=36  Identities=31%  Similarity=0.582  Sum_probs=32.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAG   37 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCC
Confidence            5888999999999988  99999999999999988543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.4e-09  Score=60.54  Aligned_cols=35  Identities=26%  Similarity=0.488  Sum_probs=30.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2epz_A            2 SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHT   36 (46)
T ss_dssp             CCCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTT
T ss_pred             CCCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhC
Confidence            5888899999999987  9999999999999988743

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.7e-09  Score=60.87  Aligned_cols=37  Identities=32%  Similarity=0.621  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRI-HTGE   38 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTT-TCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhh-cCCC
Confidence            5888999999999987  99999999999999887 4443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.7e-09  Score=60.81  Aligned_cols=37  Identities=32%  Similarity=0.669  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRI-HTGE   38 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGG-TSSC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHh-cCCC
Confidence            5888999999999987  99999999999999987 4443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.5e-09  Score=60.44  Aligned_cols=35  Identities=29%  Similarity=0.549  Sum_probs=31.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcC
Confidence            5888999999999988  9999999999999998743

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.3e-09  Score=60.63  Aligned_cols=37  Identities=27%  Similarity=0.519  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRV-HTGE   38 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTT-TSSS
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHH-cCCC
Confidence            5888999999999987  99999999999999887 4443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.6e-09  Score=60.40  Aligned_cols=35  Identities=34%  Similarity=0.578  Sum_probs=31.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHT   36 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcC
Confidence            5888999999999987  9999999999999998743

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.5e-09  Score=60.52  Aligned_cols=35  Identities=31%  Similarity=0.590  Sum_probs=30.7

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHM   36 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGG
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcC
Confidence            5888899999999977  9999999999999988744

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.2e-09  Score=60.59  Aligned_cols=37  Identities=30%  Similarity=0.660  Sum_probs=32.7

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRT-HTGE   38 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHT-SCSS
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHH-hCCC
Confidence            5888999999999988  99999999999999987 5443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.1e-09  Score=60.03  Aligned_cols=37  Identities=22%  Similarity=0.428  Sum_probs=32.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKT-HAAK   38 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGG-GCCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHH-cCCC
Confidence            6889999999999987  99999999999999987 4443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.4e-09  Score=61.04  Aligned_cols=36  Identities=33%  Similarity=0.536  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|..  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTG   37 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCC
Confidence            5889999999999988  99999999999999988543

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4e-09  Score=60.68  Aligned_cols=35  Identities=31%  Similarity=0.551  Sum_probs=30.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|..  |+++|.+...|..|+++|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHT   36 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTT
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcC
Confidence            5888889999999977  9999999999999988743

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4e-09  Score=60.72  Aligned_cols=37  Identities=30%  Similarity=0.548  Sum_probs=31.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLI-HTGE   38 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTT-TCCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHH-cCCC
Confidence            5888899999999987  99999999999999887 4443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.8e-09  Score=60.77  Aligned_cols=35  Identities=26%  Similarity=0.518  Sum_probs=30.9

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHT   36 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGS
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcC
Confidence            5888899999999987  9999999999999998744

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.7e-09  Score=60.44  Aligned_cols=37  Identities=32%  Similarity=0.697  Sum_probs=31.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |+++|.+...|.+|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRT-HSGE   38 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTT-TCCS
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHH-hCCC
Confidence            5788899999999987  99999999999999887 4443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.8e-09  Score=60.59  Aligned_cols=38  Identities=32%  Similarity=0.607  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHH-hhCCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLK-REHPGHM  117 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~-~~h~~~~  117 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|++ + |.+..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~-H~~~k   40 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYY-HTGEK   40 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTT-TTTSC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhh-cCCCC
Confidence            5888999999999987  9999999999999988 5 55443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5.1e-09  Score=60.27  Aligned_cols=36  Identities=31%  Similarity=0.511  Sum_probs=32.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTG   37 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCC
Confidence            5888999999999988  99999999999999988543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.8e-09  Score=59.53  Aligned_cols=34  Identities=35%  Similarity=0.687  Sum_probs=30.8

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTS
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcC
Confidence            788899999999987  9999999999999998743

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.6e-09  Score=60.44  Aligned_cols=35  Identities=29%  Similarity=0.538  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHT   36 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHC
Confidence            5888999999999988  9999999999999998854

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=5.1e-09  Score=58.92  Aligned_cols=36  Identities=28%  Similarity=0.565  Sum_probs=32.0

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~-H~~~   37 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRS-CSQS   37 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHH-TTCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhh-cCCC
Confidence            788899999999988  99999999999999987 5443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4e-09  Score=60.72  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTG   37 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCC
Confidence            5889999999999988  99999999999999988543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=7.4e-09  Score=59.58  Aligned_cols=36  Identities=17%  Similarity=0.408  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTG   37 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTS
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCC
Confidence            5888999999999988  99999999999999988543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.4e-09  Score=60.50  Aligned_cols=37  Identities=27%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRV-HMGE   38 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTT-TCCS
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999887 4443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.4e-09  Score=57.75  Aligned_cols=32  Identities=38%  Similarity=0.650  Sum_probs=28.1

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |+++|||+|.+++|+++|.+.+.|.+|+++|.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            57899999975469999999999999999854

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.5e-09  Score=59.69  Aligned_cols=35  Identities=29%  Similarity=0.660  Sum_probs=31.7

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   35 (42)
T 2en2_A            1 GSSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHT   35 (42)
T ss_dssp             CCCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHH
T ss_pred             CCCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcC
Confidence            3788999999999987  9999999999999998754

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.78  E-value=4.8e-09  Score=60.32  Aligned_cols=35  Identities=26%  Similarity=0.451  Sum_probs=31.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHS   36 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGT
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhC
Confidence            5888999999999987  9999999999999988743

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=4.1e-09  Score=60.65  Aligned_cols=35  Identities=26%  Similarity=0.526  Sum_probs=30.9

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHT   36 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGS
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcC
Confidence            5888899999999987  9999999999999988743

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5.7e-09  Score=60.09  Aligned_cols=36  Identities=31%  Similarity=0.549  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTG   37 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCC
Confidence            5889999999999988  99999999999999988543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.8e-09  Score=60.39  Aligned_cols=37  Identities=24%  Similarity=0.439  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRI-HTGE   38 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTT-TSCS
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999887 4443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.9e-09  Score=60.32  Aligned_cols=35  Identities=29%  Similarity=0.503  Sum_probs=30.9

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHT   36 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGT
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhC
Confidence            5888999999999987  9999999999999988743

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=4.7e-09  Score=60.35  Aligned_cols=37  Identities=32%  Similarity=0.585  Sum_probs=32.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAI-HTGK   38 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTT-SCCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHH-hCCC
Confidence            5889999999999988  99999999999999987 5443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5.8e-09  Score=59.99  Aligned_cols=36  Identities=33%  Similarity=0.646  Sum_probs=32.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTG   37 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHS
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCC
Confidence            5889999999999988  99999999999999988543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=6.3e-09  Score=59.85  Aligned_cols=37  Identities=27%  Similarity=0.556  Sum_probs=32.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRS-HSGE   38 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHH-SCCS
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHH-hCCC
Confidence            5888999999999987  99999999999999987 5443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.7e-09  Score=60.84  Aligned_cols=36  Identities=25%  Similarity=0.494  Sum_probs=31.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTG   37 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHS
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCC
Confidence            5888899999999987  99999999999999988543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4e-09  Score=60.73  Aligned_cols=35  Identities=23%  Similarity=0.483  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHE   36 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHH
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhC
Confidence            5889999999999988  9999999999999998854

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=6.3e-09  Score=59.90  Aligned_cols=37  Identities=35%  Similarity=0.702  Sum_probs=31.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (46)
T 2enh_A            2 SSGSSGTGEKPYECDV--CRKAFSHHASLTQHQRV-HSGE   38 (46)
T ss_dssp             CCCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGG-SCCS
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHH-hCCC
Confidence            4788899999999987  99999999999999887 4443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.3e-09  Score=60.25  Aligned_cols=37  Identities=32%  Similarity=0.578  Sum_probs=31.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSV-HSGE   38 (46)
T ss_dssp             CCSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTT-TTSC
T ss_pred             CCCCCCCCCcccCCCC--CCcccCcHHHHHHHHHh-cCCC
Confidence            4788899999999987  99999999999999887 4443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.2e-09  Score=60.25  Aligned_cols=36  Identities=31%  Similarity=0.494  Sum_probs=32.5

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSR   37 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCC
Confidence            5889999999999988  99999999999999998543

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.3e-09  Score=60.18  Aligned_cols=36  Identities=28%  Similarity=0.516  Sum_probs=32.2

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTG   37 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCC
Confidence            5888999999999988  99999999999999988543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.6e-09  Score=60.44  Aligned_cols=37  Identities=35%  Similarity=0.747  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+.
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   38 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKV-HTGE   38 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTT-SCSC
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHh-hCCC
Confidence            5888999999999987  99999999999999887 5443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=5.7e-09  Score=60.12  Aligned_cols=36  Identities=25%  Similarity=0.417  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|..
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTG   37 (46)
T ss_dssp             CSCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHS
T ss_pred             CCCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCC
Confidence            5888999999999987  99999999999999988543

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=5.6e-09  Score=60.10  Aligned_cols=36  Identities=25%  Similarity=0.401  Sum_probs=31.8

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++ |.+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~   37 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERI-HTR   37 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTT-CCS
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHH-cCC
Confidence            4888999999999988  99999999999999987 444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=7.9e-09  Score=59.44  Aligned_cols=35  Identities=20%  Similarity=0.250  Sum_probs=31.7

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |+++|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHM   36 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhC
Confidence            5888999999999987  9999999999999998854

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.75  E-value=7.6e-09  Score=59.54  Aligned_cols=35  Identities=26%  Similarity=0.553  Sum_probs=31.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHT   36 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcC
Confidence            5788899999999987  9999999999999988744

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4.3e-09  Score=59.95  Aligned_cols=36  Identities=25%  Similarity=0.463  Sum_probs=32.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|.+  |+++|.+...|..|+++|..
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTR   37 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCC
Confidence            5889999999999988  99999999999999988543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4.4e-09  Score=60.54  Aligned_cols=35  Identities=26%  Similarity=0.525  Sum_probs=27.3

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|+++|++++||.|.+  |++.|.+...|..|+++|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHT   36 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGS
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcC
Confidence            5777788888888876  8888888888888877643

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.9e-09  Score=56.41  Aligned_cols=34  Identities=44%  Similarity=0.851  Sum_probs=30.2

Q ss_pred             cccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           79 YGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        79 ~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +++|++++||.|..  |++.|.+...|..|+++|+.
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcC
Confidence            45789999999988  99999999999999998553

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9e-09  Score=59.22  Aligned_cols=36  Identities=31%  Similarity=0.566  Sum_probs=32.1

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTG   37 (46)
T ss_dssp             CCCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcC
Confidence            5788999999999987  99999999999999988543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.71  E-value=1.1e-08  Score=54.43  Aligned_cols=31  Identities=29%  Similarity=0.518  Sum_probs=27.6

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +||.|.+  |+++|.+...|..|+++|++.+||
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            6899975  999999999999999999877665

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.5e-08  Score=57.62  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=31.6

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|+++|++++||.|..  |++.|.+...|..|+++|.
T Consensus         2 ~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eou_A            2 SSGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHA   36 (44)
T ss_dssp             CCSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHC
Confidence            4788899999999987  9999999999999998854

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=55.86  Aligned_cols=34  Identities=32%  Similarity=0.504  Sum_probs=29.4

Q ss_pred             cccCCCCCCccCCcccccccccChHHHHHH-HHhhCCC
Q 026846           79 YGSASSERPYACPYEGCEKAYIHEYKLKLH-LKREHPG  115 (232)
Q Consensus        79 ~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H-~~~~h~~  115 (232)
                      +++|++++||.|..  |+++|.+...|..| +++ |.+
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~-H~~   35 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQK-HSN   35 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHH-TCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHH-ccC
Confidence            45789999999987  99999999999999 766 544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=5.6e-09  Score=57.04  Aligned_cols=34  Identities=26%  Similarity=0.507  Sum_probs=30.7

Q ss_pred             HHhcCCCcccCCCCCCCccccch-hhHHHHHHHhcCC
Q 026846           17 KTHSQENYHICPYPDCGKRYAHE-YKLKNHIASHHEK   52 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~-~~l~~H~~~h~~~   52 (232)
                      ++|++++||+|.+  |++.|.++ ..|..|+++|++.
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCC
Confidence            3689999999975  99999999 9999999999764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=9.8e-09  Score=55.59  Aligned_cols=33  Identities=24%  Similarity=0.373  Sum_probs=30.1

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++++||.|.+  |++.|..+..|..|+++|++.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            588999999975  999999999999999999764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=7.1e-09  Score=60.31  Aligned_cols=32  Identities=19%  Similarity=0.120  Sum_probs=30.2

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGK   34 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~   34 (232)
                      +|++.|.....|.+|+++|++++||+|.+  |+|
T Consensus        17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A           17 ICGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            59999999999999999999999999976  986

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.66  E-value=8.3e-09  Score=59.79  Aligned_cols=40  Identities=18%  Similarity=0.590  Sum_probs=32.9

Q ss_pred             CcccccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           74 PPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        74 ~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .+..|+.+|++++||.|.++.|+++|.+...|..|+++|.
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            4455667799999999963349999999999999998854

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.2e-08  Score=55.32  Aligned_cols=33  Identities=21%  Similarity=0.368  Sum_probs=30.0

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++++||+|.+  |++.|.++..|..|+++|++.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            588999999975  999999999999999999754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=5.2e-09  Score=57.32  Aligned_cols=33  Identities=24%  Similarity=0.367  Sum_probs=29.9

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHH-HHHhcC
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNH-IASHHE   51 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H-~~~h~~   51 (232)
                      ++|++++||+|.+  |+++|.++..|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCC--CCcccCCHHHHHHHHHHHccC
Confidence            5799999999975  99999999999999 888864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=59.65  Aligned_cols=33  Identities=33%  Similarity=0.581  Sum_probs=29.2

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHH-HhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIA-SHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~   52 (232)
                      +|++++||.|.+  |+++|.++.+|.+|++ +|++.
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCC
Confidence            589999999986  9999999999999999 89765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.4e-08  Score=55.00  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=29.9

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      .|++++||+|.+  |++.|.++..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            588999999975  999999999999999999754

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2e-08  Score=54.32  Aligned_cols=33  Identities=30%  Similarity=0.614  Sum_probs=29.9

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++++||.|.+  |++.|.++..|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            478999999975  999999999999999999764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.63  E-value=3e-08  Score=53.20  Aligned_cols=32  Identities=25%  Similarity=0.655  Sum_probs=28.3

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +|++++||.|..  |++.|.+...|..|+++|+.
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcC
Confidence            468899999988  99999999999999988543

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=4.4e-08  Score=56.25  Aligned_cols=35  Identities=20%  Similarity=0.304  Sum_probs=30.7

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      ++++|++++||.|.+  |++.|.+...|..|+++|..
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eom_A            3 SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTG   37 (46)
T ss_dssp             CCCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCC
Confidence            467889999999988  99999999999999988543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.63  E-value=2.8e-08  Score=53.42  Aligned_cols=31  Identities=29%  Similarity=0.593  Sum_probs=27.9

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|++++||.|..  |++.|.+...|..|+++|+
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcC
Confidence            478899999988  9999999999999998844

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.61  E-value=9.5e-08  Score=59.17  Aligned_cols=62  Identities=19%  Similarity=0.466  Sum_probs=50.6

Q ss_pred             ccCCCCCCCccccchhhHHHHHH-HhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccChH
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIA-SHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEY  103 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~  103 (232)
                      |.|.|..|++.|.+...|..|+. .|.+.++-                           ....+|.|...+|++.+....
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~---------------------------~~~~~~~C~W~~C~~~~~~~~   54 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK---------------------------HPMEPLACNWEDCDFLGDDTA   54 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC---------------------------CSSCCEECCCSSCCCEESSHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC---------------------------CCCCCCEeeCCCCcCCCCChH
Confidence            67999999999999999999984 67653210                           012489999888999999999


Q ss_pred             HHHHHHHhhC
Q 026846          104 KLKLHLKREH  113 (232)
Q Consensus       104 ~l~~H~~~~h  113 (232)
                      .|..|++..|
T Consensus        55 ~L~~Hir~~H   64 (64)
T 1zw8_A           55 SIVNHINAQH   64 (64)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHhhccccC
Confidence            9999999876

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.6e-08  Score=53.92  Aligned_cols=33  Identities=24%  Similarity=0.567  Sum_probs=29.7

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      .|++++||.|.+  |++.|..+..|..|+++|++.
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            478899999975  999999999999999999764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2.8e-08  Score=56.78  Aligned_cols=36  Identities=25%  Similarity=0.558  Sum_probs=31.1

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      +.++|++++||.|.+  |++.|.+...|..|+++ |.+.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~   38 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRI-HTGE   38 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTT-TSSC
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHH-hCCC
Confidence            567889999999988  99999999999999987 4443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.58  E-value=3e-08  Score=57.66  Aligned_cols=35  Identities=29%  Similarity=0.605  Sum_probs=28.4

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      +|++++||.|.+  |+++|.+...|..|++..|.+..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            478999999988  99999999999999983365543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.58  E-value=3.5e-08  Score=51.47  Aligned_cols=30  Identities=27%  Similarity=0.672  Sum_probs=26.2

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.++.|+++|.++..|..|+++|++.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589997446999999999999999999764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=4.6e-08  Score=56.10  Aligned_cols=34  Identities=26%  Similarity=0.548  Sum_probs=29.2

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++++|++++||.|.+  |++.|.+...|..|+++|+
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHT   36 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhC
Confidence            567789999999987  9999999999999988743

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.56  E-value=5.5e-08  Score=51.04  Aligned_cols=31  Identities=32%  Similarity=0.574  Sum_probs=26.8

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      ++||.|.++.|+++|.+...|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799997435999999999999999999764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=5.7e-08  Score=55.44  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=29.1

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCG   33 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~   33 (232)
                      +|++.|.....|.+|+++|+++++|.|.+  ||
T Consensus        15 ~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A           15 VCGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             TTTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CCCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            59999999999999999999999999975  86

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=7e-08  Score=53.84  Aligned_cols=34  Identities=32%  Similarity=0.645  Sum_probs=29.4

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      ++|++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   36 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERI-HTGS   36 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGG-CCCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHH-hCCC
Confidence            4688999999988  99999999999999987 5443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.4e-08  Score=52.32  Aligned_cols=31  Identities=39%  Similarity=0.696  Sum_probs=28.0

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|++++||.|..  |++.|.+...|..|+++|.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhc
Confidence            578999999988  9999999999999998843

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.9e-08  Score=53.13  Aligned_cols=32  Identities=31%  Similarity=0.659  Sum_probs=28.7

Q ss_pred             ccCCCCCCccCCcccccccccCh-HHHHHHHHhhC
Q 026846           80 GSASSERPYACPYEGCEKAYIHE-YKLKLHLKREH  113 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~-~~l~~H~~~~h  113 (232)
                      ++|++++||.|..  |++.|.+. ..|..|+++|.
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcC
Confidence            4688999999988  99999999 99999998854

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=7.5e-08  Score=51.94  Aligned_cols=31  Identities=39%  Similarity=0.757  Sum_probs=28.2

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|++++||.|.+  |++.|.....|..|+++|.
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHcc
Confidence            578999999988  9999999999999998854

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=9e-08  Score=55.31  Aligned_cols=39  Identities=28%  Similarity=0.615  Sum_probs=30.4

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      .|.++|++++||.|.++.|++.|.+...|..|+++ |.+.
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~   40 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGV   40 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT-SCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH-hCCC
Confidence            36678889999999721399999999999999887 5443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=7.3e-08  Score=52.07  Aligned_cols=31  Identities=29%  Similarity=0.499  Sum_probs=27.9

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhh
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      +.|++++||.|..  |++.|.+...|..|+++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHh
Confidence            3578899999988  999999999999999874

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.48  E-value=1.4e-07  Score=53.25  Aligned_cols=33  Identities=24%  Similarity=0.474  Sum_probs=28.6

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      ++|++++||.|..  |++.|.+...|..|+++|..
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~   35 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHS   35 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCC
Confidence            4678999999987  99999999999999988543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=7.6e-08  Score=55.18  Aligned_cols=34  Identities=29%  Similarity=0.614  Sum_probs=29.2

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .+++|++++||.|.+  |+++|.+...|..|+++|+
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHT   36 (46)
T ss_dssp             CSSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHH
T ss_pred             CCCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcC
Confidence            356788999999987  9999999999999988854

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.46  E-value=2.7e-07  Score=57.10  Aligned_cols=48  Identities=23%  Similarity=0.354  Sum_probs=44.1

Q ss_pred             ccccCCChHHHHHHHH-HhcCCC------cccCCCCCCCccccchhhHHHHHHHh
Q 026846            2 KAVAFSLDFNLRSHMK-THSQEN------YHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~-~H~~~~------p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |++.|.....|..|+. .|.+.+      +|.|.|..|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            8999999999999984 798776      89999999999999999999999975

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-07  Score=51.87  Aligned_cols=33  Identities=24%  Similarity=0.538  Sum_probs=28.1

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|++++||.|.++.|+++|.+.+.|..|+++|.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            368899999973359999999999999998854

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.7e-07  Score=50.51  Aligned_cols=31  Identities=29%  Similarity=0.374  Sum_probs=28.0

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|++++||.|..  |++.|.+...|..|+++|.
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhc
Confidence            478899999988  9999999999999998854

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.45  E-value=9.7e-09  Score=54.27  Aligned_cols=31  Identities=29%  Similarity=0.451  Sum_probs=25.1

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +||.|.+  |+++|.++..|..|+++|++.+||
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            5789964  999999999888888888776654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=1.5e-07  Score=51.85  Aligned_cols=32  Identities=22%  Similarity=0.552  Sum_probs=27.0

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |++++||.|..  |++.|.+...|..|+++ |.+.
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-H~~~   32 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNV-HRRD   32 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHT-TCCS
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHH-cCCC
Confidence            56789999988  99999999999999987 5443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=6.3e-07  Score=55.71  Aligned_cols=33  Identities=15%  Similarity=0.320  Sum_probs=29.2

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .|.++|||.|..  |+|+|.+...|..|+++|...
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCC
Confidence            467899999988  999999999999999996554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.1e-07  Score=50.16  Aligned_cols=31  Identities=32%  Similarity=0.681  Sum_probs=27.7

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .|.+++||.|.+  |++.|.....|..|+++|.
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhC
Confidence            367899999988  9999999999999999854

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=2e-07  Score=58.03  Aligned_cols=33  Identities=24%  Similarity=0.490  Sum_probs=29.9

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      |.+++||+|.+  |+|+|.++..|.+|+++|++..
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            67899999975  9999999999999999998753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.39  E-value=8.9e-08  Score=52.03  Aligned_cols=26  Identities=19%  Similarity=0.436  Sum_probs=23.9

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHH
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHI   46 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~   46 (232)
                      +.|++||+|.  .|+|+|.++++|.+|+
T Consensus         3 ~~gekp~~C~--~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCL--PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEET--TTTEECSCHHHHHHHH
T ss_pred             CCCccCeECC--CCCCccCCHhHccCcC
Confidence            4689999997  4999999999999998

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.36  E-value=1.9e-07  Score=50.73  Aligned_cols=27  Identities=19%  Similarity=0.311  Sum_probs=24.6

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHH
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLK  110 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~  110 (232)
                      +.|+|||.|..  |||+|.+.++|.+|+.
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcCC
Confidence            47899999987  9999999999999983

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=2.8e-07  Score=50.35  Aligned_cols=32  Identities=25%  Similarity=0.693  Sum_probs=27.4

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      |++++||.|.++.|+++|.+...|.+|+++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            57899999973349999999999999998854

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.34  E-value=3.9e-07  Score=46.28  Aligned_cols=28  Identities=29%  Similarity=0.640  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.+  |+++|.+...|..|+++|++.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            5899975  999999999999999999754

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=2.9e-07  Score=47.08  Aligned_cols=29  Identities=21%  Similarity=0.564  Sum_probs=25.8

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      ++||.|.+  |++.|.....|..|+++|++.
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccC
Confidence            47999975  999999999999999999754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.33  E-value=3e-07  Score=46.75  Aligned_cols=28  Identities=36%  Similarity=0.609  Sum_probs=25.1

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.+  |++.|.....|..|+++|++.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            5899975  999999999999999999764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.32  E-value=2.8e-07  Score=46.87  Aligned_cols=28  Identities=25%  Similarity=0.654  Sum_probs=24.8

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      +||.|.++.|++.|..+..|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            5899974469999999999999999985

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.32  E-value=4.6e-07  Score=46.31  Aligned_cols=29  Identities=38%  Similarity=0.641  Sum_probs=25.6

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      +||.|.+  |++.|.....|..|+++|++.+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            5899975  9999999999999999997654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=3.7e-07  Score=45.72  Aligned_cols=27  Identities=22%  Similarity=0.459  Sum_probs=24.3

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ++||.|.+  |+++|.++..|..|+++|+
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            47999975  9999999999999999884

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.5e-07  Score=45.98  Aligned_cols=28  Identities=29%  Similarity=0.554  Sum_probs=25.2

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.+  |++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            5899975  999999999999999999764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=5.2e-07  Score=45.70  Aligned_cols=28  Identities=32%  Similarity=0.656  Sum_probs=25.1

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.+  |+++|.+...|..|+++|+++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            5899975  999999999999999999764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=3.4e-07  Score=46.23  Aligned_cols=27  Identities=26%  Similarity=0.577  Sum_probs=24.5

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ++||.|.+  |+++|.++..|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            47999975  9999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=2.7e-07  Score=46.37  Aligned_cols=27  Identities=19%  Similarity=0.408  Sum_probs=24.2

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ++||.|.+  |+++|.++..|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhcC
Confidence            47999975  9999999999999999873

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.25  E-value=7.3e-07  Score=47.13  Aligned_cols=27  Identities=15%  Similarity=0.006  Sum_probs=25.2

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHIC   27 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C   27 (232)
                      +|++.|.....|..|+++|++++||.+
T Consensus         7 ~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            7 ECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             SSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            599999999999999999999999863

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.9e-07  Score=44.94  Aligned_cols=26  Identities=23%  Similarity=0.609  Sum_probs=23.4

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      ++||.|..  ||+.|.....|..|+++|
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHHHc
Confidence            47899987  999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=2.5e-07  Score=59.19  Aligned_cols=47  Identities=19%  Similarity=0.305  Sum_probs=41.9

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|++.|. ...|..|+ .|.+++||.|.+  |++.|. ...|..|+++|.+.
T Consensus        22 ~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           22 HCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             SSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTB
T ss_pred             ccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCC
Confidence            6999995 99999999 999999999975  999987 58999999999764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=4.2e-07  Score=45.60  Aligned_cols=26  Identities=23%  Similarity=0.655  Sum_probs=23.3

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      ++||.|..  ||++|.+...|..|+++|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            47899987  999999999999999874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=47.89  Aligned_cols=28  Identities=25%  Similarity=0.551  Sum_probs=24.3

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +||.|.+  |+++|.....|..|+++|++.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899975  999999999999999998753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=47.90  Aligned_cols=29  Identities=21%  Similarity=0.456  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      ++||.|.+  |++.|.....|..|+++|++.
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899975  999999999999999998753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=7.9e-07  Score=44.79  Aligned_cols=26  Identities=27%  Similarity=0.705  Sum_probs=23.4

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      ++||.|..  |++.|.+...|..|+++|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHhc
Confidence            47899987  999999999999999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.16  E-value=1.1e-06  Score=43.74  Aligned_cols=26  Identities=19%  Similarity=0.485  Sum_probs=22.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      ||+|.+  |+++|.++..|..|+++|++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            689975  99999999999999999864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=1.6e-06  Score=45.11  Aligned_cols=29  Identities=38%  Similarity=0.857  Sum_probs=23.9

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++||.|.++.|+++|.+...|..|+++|.
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            47899972239999999999999998843

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.14  E-value=1.6e-06  Score=44.10  Aligned_cols=28  Identities=36%  Similarity=0.734  Sum_probs=24.6

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      +||.|..  |++.|.....|..|+++|+..
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccC
Confidence            5799987  999999999999999986643

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=2.3e-06  Score=56.42  Aligned_cols=37  Identities=19%  Similarity=0.288  Sum_probs=31.5

Q ss_pred             cccccccCCCCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           75 PAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        75 l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +..|.++|++++||.|..  |++.|.+...|..|+++|.
T Consensus        13 ~~~~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht   49 (88)
T 1x6f_A           13 IILGNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHN   49 (88)
T ss_dssp             CCCCCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             eeccccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhC
Confidence            344567799999999987  9999999999999998854

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.7e-06  Score=44.01  Aligned_cols=27  Identities=26%  Similarity=0.698  Sum_probs=23.9

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++||.|..  |+++|.....|..|+++|+
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhc
Confidence            47899988  9999999999999998743

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.11  E-value=1.7e-06  Score=44.68  Aligned_cols=28  Identities=25%  Similarity=0.660  Sum_probs=23.0

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +||.|.++.||++|.+...|..|+++|.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            5799972239999999999999998843

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.11  E-value=2.3e-06  Score=43.21  Aligned_cols=26  Identities=27%  Similarity=0.703  Sum_probs=23.4

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +||.|..  |++.|.....|..|+++|.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhc
Confidence            5799987  9999999999999999854

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=3.8e-07  Score=45.21  Aligned_cols=26  Identities=38%  Similarity=0.807  Sum_probs=22.9

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      +||.|.+  |+++|.++..|..|+++|+
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHHD   26 (26)
Confidence            5899975  9999999999999999873

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.08  E-value=4.8e-07  Score=47.45  Aligned_cols=24  Identities=33%  Similarity=0.771  Sum_probs=15.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      +||.|..  |+++|.+.+.|..|+++
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~   24 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKT   24 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTS
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHH
Confidence            3566655  66666666666666655

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=1.8e-06  Score=44.12  Aligned_cols=28  Identities=18%  Similarity=0.373  Sum_probs=24.0

Q ss_pred             CcccCCCCCCCccccchhhHHHH-HHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNH-IASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   52 (232)
                      +||.|..  |++.|.++..|..| +++|+++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            5899975  99999999999999 6888653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.07  E-value=1.9e-06  Score=43.59  Aligned_cols=26  Identities=31%  Similarity=0.701  Sum_probs=23.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +||.|..  |++.|.....|..|+++|.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhc
Confidence            5899987  9999999999999998854

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.07  E-value=1e-06  Score=53.97  Aligned_cols=37  Identities=11%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             cccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           75 PAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        75 l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      |..|+++|++++||.|..  ||++|.....|.   ++ |.+..
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~-H~~~k   38 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LF-DPMTG   38 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HE-ETTTT
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hh-cCCCC
Confidence            678999999999999988  999999988886   44 55543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5e-07  Score=44.76  Aligned_cols=25  Identities=28%  Similarity=0.840  Sum_probs=22.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||.|..  ||++|.+...|..|+++|
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899977  999999999999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=2.2e-06  Score=43.19  Aligned_cols=27  Identities=33%  Similarity=0.583  Sum_probs=23.8

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +||.|..  |+++|.....|..|+++|+.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhcc
Confidence            5899987  99999999999999988543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.01  E-value=3.2e-06  Score=41.98  Aligned_cols=25  Identities=24%  Similarity=0.704  Sum_probs=21.6

Q ss_pred             CccCCcccccccccChHHHHHHHHhhC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ||.|..  |++.|.+...|..|+++|+
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcC
Confidence            589987  9999999999999998743

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=3.2e-06  Score=42.62  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=23.4

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +||.|..  |+++|.....|..|+++|.
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhc
Confidence            5899987  9999999999999998854

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=5e-06  Score=42.31  Aligned_cols=28  Identities=32%  Similarity=0.717  Sum_probs=22.6

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      +||.|..  |++.|.+...|..|+...|.+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccC
Confidence            5799987  999999999999994333654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.97  E-value=3.9e-06  Score=42.33  Aligned_cols=27  Identities=30%  Similarity=0.625  Sum_probs=22.6

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      +||.|..+.|++.|.....|..|+++|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            578997113999999999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.19  E-value=1.1e-06  Score=44.88  Aligned_cols=27  Identities=22%  Similarity=0.616  Sum_probs=23.3

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      ++||.|..  |++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIH--CQRQFADPGALQRHVRIHT   27 (30)
Confidence            36899987  9999999999999998754

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.19  E-value=1.1e-06  Score=44.61  Aligned_cols=26  Identities=27%  Similarity=0.668  Sum_probs=22.5

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +||.|..  |+++|.....|..|+++|+
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHT   26 (29)
Confidence            5789977  9999999999999998743

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.04  E-value=0.00012  Score=50.76  Aligned_cols=31  Identities=19%  Similarity=0.397  Sum_probs=27.5

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhh
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      .-|+|.+||.|..  |++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            3578999999987  999999999999998763

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.91  E-value=0.0007  Score=47.56  Aligned_cols=82  Identities=18%  Similarity=0.266  Sum_probs=54.6

Q ss_pred             CCcccCCCCCCCccccchhhHHHHH--HHhcCC-CCCccCCc-CCCCCccccCCCCCcccccccCCCCCCccCCcccccc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHI--ASHHEK-NAAVEVPR-YATPPERITKTPKPPAGVYGSASSERPYACPYEGCEK   97 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~--~~h~~~-~~~~c~~~-~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k   97 (232)
                      .+++.|.+  |...|.+...+..|.  +.|... +.+.+... -...-++.+..    ..+...+.+.+.|-|..  |++
T Consensus        30 ~~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~C~~--C~~  101 (127)
T 1zu1_A           30 FSDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEISDGEDRSKCCPV--CNM  101 (127)
T ss_dssp             BCSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCCSSCCCTTTEETT--TTE
T ss_pred             CCCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----CccccccCCCCCeEcCC--CCC
Confidence            47899987  999999999999998  556432 22221100 00111222221    12445667788999988  999


Q ss_pred             cccChHHHHHHHHh
Q 026846           98 AYIHEYKLKLHLKR  111 (232)
Q Consensus        98 ~f~~~~~l~~H~~~  111 (232)
                      .|.....|..|.+.
T Consensus       102 ~f~s~~~~~~H~~g  115 (127)
T 1zu1_A          102 TFSSPVVAESHYIG  115 (127)
T ss_dssp             ECSSHHHHHHHHTS
T ss_pred             EeCCHHHHHHHHCC
Confidence            99999999999763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.82  E-value=0.00026  Score=49.14  Aligned_cols=30  Identities=23%  Similarity=0.460  Sum_probs=27.1

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHh
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      .|+|++||.|.+  |++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            488999999975  999999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.50  E-value=0.0094  Score=33.37  Aligned_cols=25  Identities=24%  Similarity=0.630  Sum_probs=22.1

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHh
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      .+|.|  +.|++.|.....|+.||+..
T Consensus        11 ~~~~C--PrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKIC--PRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCC--TTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeC--CcccccccchHHHHhhhhhc
Confidence            57999  47999999999999999944

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.31  E-value=0.011  Score=33.14  Aligned_cols=24  Identities=21%  Similarity=0.394  Sum_probs=22.1

Q ss_pred             CCccCCcccccccccChHHHHHHHHh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      -+|.|+.  |++.|.....|++||+.
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhhh
Confidence            6799987  99999999999999985

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.79  E-value=0.078  Score=36.95  Aligned_cols=19  Identities=11%  Similarity=0.181  Sum_probs=16.1

Q ss_pred             CccccCCChHHHHHHH--HHh
Q 026846            1 MKAVAFSLDFNLRSHM--KTH   19 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~--~~H   19 (232)
                      +|+..|...+.+..|.  +.|
T Consensus        37 ~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           37 VCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             TTTEECCSHHHHHHHHHCHHH
T ss_pred             CCCCEeCCHHHHHHHHCcHHH
Confidence            6999999999998888  455

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.42  E-value=0.26  Score=25.67  Aligned_cols=27  Identities=26%  Similarity=0.454  Sum_probs=24.3

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .|.|+.  |.+.|.....|..|-...|..
T Consensus         5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQ--CMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence            499988  999999999999999888864

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=88.95  E-value=0.47  Score=31.25  Aligned_cols=34  Identities=21%  Similarity=0.592  Sum_probs=29.5

Q ss_pred             CCCccCC-cccccccccChHHHHHHHHhhCCCCCC
Q 026846           85 ERPYACP-YEGCEKAYIHEYKLKLHLKREHPGHMS  118 (232)
Q Consensus        85 ~k~~~C~-~~~C~k~f~~~~~l~~H~~~~h~~~~~  118 (232)
                      +..|.|. ..+|.++|.....|..|+...|....+
T Consensus        56 ~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~   90 (101)
T 3vk6_A           56 GSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGK   90 (101)
T ss_dssp             GGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCC
T ss_pred             CCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCC
Confidence            5679999 789999999999999999988876543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.72  E-value=0.054  Score=34.03  Aligned_cols=29  Identities=24%  Similarity=0.338  Sum_probs=22.4

Q ss_pred             CccCCccccccccc-------ChHHHHHHHHhhCCCCC
Q 026846           87 PYACPYEGCEKAYI-------HEYKLKLHLKREHPGHM  117 (232)
Q Consensus        87 ~~~C~~~~C~k~f~-------~~~~l~~H~~~~h~~~~  117 (232)
                      .=.|.+  |++.|.       --++|.+|++.+|..+.
T Consensus        28 ~A~Ck~--C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~   63 (76)
T 2djr_A           28 YATCRL--CGRQVSRGPGVNVGTTALWKHLKSMHREEL   63 (76)
T ss_dssp             CEEESS--SCCBCCCCSSCCSSSCHHHHHHHHTTHHHH
T ss_pred             EEECCC--CCCccCCCCCCCCchHHHHHHHHHHCHHHH
Confidence            356888  988887       24689999999997654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.81  E-value=0.34  Score=24.52  Aligned_cols=25  Identities=28%  Similarity=0.643  Sum_probs=21.9

Q ss_pred             ccCCcccccccccChHHHHHHHHhhCC
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      -.|.+  |.+.|..-.+|.+|++..|.
T Consensus        10 qhcrf--ckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRF--CKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETT--TTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence            45888  99999999999999998664

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=84.41  E-value=1.7  Score=31.48  Aligned_cols=82  Identities=15%  Similarity=0.115  Sum_probs=52.6

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      .....|+...|++.+. ...|..|+.... -.++.|     +.|+..+ .+..|..|+...-..++-.|.+  |+..|..
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C~-~~~v~C-----~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~--C~~~~~~  149 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHCE-FALMDC-----PQCQRPF-QKFHINIHILKDCPRRQVSCDN--CAASMAF  149 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTCT-TSEEEC-----TTTCCEE-EGGGHHHHHHHTCTTCEEECTT--TCCEEEG
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcCC-ceeeEC-----CCCChHH-HHHHHHHHhhhhCCCCCeECCC--CCCccCH
Confidence            3456675446877655 445666654321 122233     4676665 5566777877777788899987  9987755


Q ss_pred             hHHHHHHHHhhCCC
Q 026846          102 EYKLKLHLKREHPG  115 (232)
Q Consensus       102 ~~~l~~H~~~~h~~  115 (232)
                       ..|..|..+ +.+
T Consensus       150 -~~l~~H~~~-~~~  161 (170)
T 3hcs_A          150 -EDKEIHDQN-CPL  161 (170)
T ss_dssp             -GGHHHHHTT-CCC
T ss_pred             -HHHHhHHHh-CcC
Confidence             578999866 444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.40  E-value=0.59  Score=23.65  Aligned_cols=23  Identities=30%  Similarity=0.709  Sum_probs=20.3

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      -.|+|  |.+.|+.-.+|..|++.-
T Consensus        10 qhcrf--ckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRF--CKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETT--TTEECSSHHHHHHHHHHT
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHHh
Confidence            35888  999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	232
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-04
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	4e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.002

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 25 HICPYPDCGKRYAHEYKLKNHIASH 49
          ++CP+  C K++A    LK+HI +H
Sbjct: 3  YVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 86  RPYACPYEGCEKAYIHEYKLKLHLK 110
           RPY CP++GC K +     LK H+ 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHIL 25

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 86  RPYACPYEGCEKAYIHEYKLKLHLKREH 113
           +PY C   GC K Y     L+ H+K  H
Sbjct: 1   KPYVCKLPGCTKRYTDPSSLRKHVKTVH 28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 5  AFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
          +F+       HM  H     + C    CGK++  ++ L  H+  H
Sbjct: 11 SFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 85  ERPYACPYEGCEKAYIHEYKLKLHLK 110
           +RPY+C + GC+KA++  + L  H K
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKK 26

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.4 bits (76), Expect = 0.001
 Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 11 NLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH 49
          ++  ++K    +    C +P C K +   Y +++HI +H
Sbjct: 6  SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 83  SSERPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           S  +PY C    C K +     L  H+K+ H  
Sbjct: 1   SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTS 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKN 53
          +TH+ E  + C    C K +  +  L  H   +H+ N
Sbjct: 1  RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPN 35

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 86  RPYACPYEGCEKAYIHEYKLKLHLKREHPG 115
           RPYACP E C++ +     L  H  R H G
Sbjct: 1   RPYACPVESCDRRFSRSADLTRH-IRIHTG 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	232
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.55
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.36
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.35
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.35
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.33
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.31
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.3
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.27
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.26
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.25
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.24
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.24
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.23
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.15
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.15
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.14
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.14
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.09
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.07
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.05
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.02
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.96
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.95
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.89
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.85
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.61
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.55
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.26
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.26
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.03
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.84
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.79
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.76
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.76
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.75
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.71
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.7
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.69
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.67
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.62
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.61
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.47
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.42
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.39
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.36
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.33
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.26
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.2
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.08
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.01
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.95
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.92
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.9
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.73
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.73
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.38
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.01
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.86
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.74
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.68
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.66
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.64
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.95
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.93
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	94.91
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.01
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.98
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.54
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.97
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.36
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.91
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.88
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.69
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.13
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	91.06
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.52
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.31
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.96
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	86.35
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.23
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	85.75
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	84.99
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	82.21

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=7.9e-17  Score=95.53  Aligned_cols=53  Identities=30%  Similarity=0.656  Sum_probs=48.6

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcCCCCCccCCcCCCCCccccCCCCCcccccccCCCCCCccCCcccccccccC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHEKNAAVEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIH  101 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~~~~~~c~~~~~~~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~  101 (232)
                      +|||+|.   ||++|..+..|..|+++|+                                 |++||.|.+  ||++|.+
T Consensus         1 EK~y~C~---Cgk~F~~~~~l~~H~~~Ht---------------------------------~ekpy~C~~--C~k~F~~   42 (53)
T d2csha1           1 DKLYPCQ---CGKSFTHKSQRDRHMSMHL---------------------------------GLRPYGCGV--CGKKFKM   42 (53)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHS---------------------------------CCCSEECTT--TSCEESS
T ss_pred             CcCCCCC---CCCeECCHHHhHHHhhccc---------------------------------cccCCcCCC--cCCEecC
Confidence            6899993   9999999999999999994                                 688999988  9999999


Q ss_pred             hHHHHHHHHhh
Q 026846          102 EYKLKLHLKRE  112 (232)
Q Consensus       102 ~~~l~~H~~~~  112 (232)
                      .+.|..|+++|
T Consensus        43 ~~~L~~H~r~H   53 (53)
T d2csha1          43 KHHLVGHMKIH   53 (53)
T ss_dssp             SHHHHHHHTTT
T ss_pred             HHHHHHHHhcC
Confidence            99999999874

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-15  Score=89.99  Aligned_cols=46  Identities=24%  Similarity=0.368  Sum_probs=44.5

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHh
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      ||++|.....|..|+++|+|++||.|.+  |+++|.++..|..|+++|
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            9999999999999999999999999975  999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.9e-14  Score=77.46  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=33.9

Q ss_pred             HHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           14 SHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        14 ~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|+++|+++|||+|.+  |||+|.++++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5788999999999975  999999999999999999863

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.9e-13  Score=72.31  Aligned_cols=35  Identities=26%  Similarity=0.660  Sum_probs=31.9

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |+|+|+|||+|.+  |+++|+++++|++|++++|...
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccCCC
Confidence            5799999999988  9999999999999998888753

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=2.3e-14  Score=81.41  Aligned_cols=44  Identities=20%  Similarity=0.539  Sum_probs=38.4

Q ss_pred             hHHHHHHHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846            9 DFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus         9 ~~~L~~H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      +..|.+|+ .|+|++||+|.|+.|+++|..+++|..|+++|+|+|
T Consensus         4 ~~~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34566777 499999999998889999999999999999998753

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=3.6e-13  Score=72.56  Aligned_cols=33  Identities=27%  Similarity=0.686  Sum_probs=31.1

Q ss_pred             ccccCCCCCCccCCcccccccccChHHHHHHHHhh
Q 026846           78 VYGSASSERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        78 H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |.|+|+|+|||+|..  |+++|.++++|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcC
Confidence            789999999999988  999999999999999884

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.3e-13  Score=70.26  Aligned_cols=33  Identities=30%  Similarity=0.440  Sum_probs=30.5

Q ss_pred             HhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           18 THSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        18 ~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      +|+|+|||+|..  |+++|.++++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            699999999975  999999999999999999863

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.5e-13  Score=72.66  Aligned_cols=36  Identities=28%  Similarity=0.511  Sum_probs=33.0

Q ss_pred             cccccCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           77 GVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        77 ~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .|+++|+++|||.|..  |||+|.+.++|..|+++ |.+
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~-HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRT-HTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTT-TCC
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCcc-CCC
Confidence            6899999999999987  99999999999999988 554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.1e-13  Score=71.11  Aligned_cols=34  Identities=35%  Similarity=0.773  Sum_probs=30.9

Q ss_pred             ccCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           80 GSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        80 ~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |+|+|+|||+|.+  ||++|.+.++|..|+++|+..
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5789999999988  999999999999999997653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=2.1e-13  Score=73.51  Aligned_cols=34  Identities=18%  Similarity=0.370  Sum_probs=31.8

Q ss_pred             HHHHhcCCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           15 HMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        15 H~~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |.|+|+|+|||+|.+  |+++|.++++|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCc
Confidence            678999999999975  9999999999999999995

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.2e-13  Score=70.60  Aligned_cols=34  Identities=26%  Similarity=0.510  Sum_probs=31.1

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |+|+|+|||+|.+  |+++|.++++|..|+++|++.
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5899999999975  999999999999999999753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.3e-12  Score=67.00  Aligned_cols=31  Identities=26%  Similarity=0.659  Sum_probs=28.8

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      |||+|.|+.|+|+|.+.++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6999999999999999999999999998753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.9e-12  Score=68.83  Aligned_cols=33  Identities=30%  Similarity=0.686  Sum_probs=28.4

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhcCCCCCcc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHHEKNAAVE   57 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~c   57 (232)
                      |.|.++.|+++|.++.+|++|+++|+|++||.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            789988999999999999999999977655555

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.8e-12  Score=68.37  Aligned_cols=31  Identities=16%  Similarity=0.413  Sum_probs=29.2

Q ss_pred             hcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           19 HSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        19 H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |+|+|||+|.+  |+|+|.++.+|.+|+++|+.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            78999999986  99999999999999999975

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.5e-12  Score=65.21  Aligned_cols=30  Identities=33%  Similarity=0.671  Sum_probs=28.2

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |||+|.|+.|+|+|.++++|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            799999999999999999999999999863

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.3e-12  Score=69.70  Aligned_cols=35  Identities=26%  Similarity=0.449  Sum_probs=28.0

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHH-HhcCCCCCcc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIA-SHHEKNAAVE   57 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~c   57 (232)
                      .+|||+|.+  ||++|.++.+|.+|++ +|++++||.|
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCC
Confidence            579999975  9999999999999986 5865444433

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.6e-12  Score=65.32  Aligned_cols=30  Identities=27%  Similarity=0.780  Sum_probs=28.3

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |||+|.|+.|+|+|.++++|.+|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            799999999999999999999999999873

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.5e-12  Score=66.30  Aligned_cols=32  Identities=38%  Similarity=0.668  Sum_probs=28.9

Q ss_pred             cCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           81 SASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        81 ~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      +|+|+|||.|..  ||++|.+.+.|..|+++ |.+
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~-Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRV-HTG   32 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHG-GGC
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccc-cCC
Confidence            589999999987  99999999999999988 544

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.1e-12  Score=68.85  Aligned_cols=33  Identities=33%  Similarity=0.540  Sum_probs=29.4

Q ss_pred             HHhcCCCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           17 KTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        17 ~~H~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |+|+|+|||+|.+  |+++|.++.+|.+|++.+++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            4799999999986  99999999999999876643

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=2.5e-12  Score=72.80  Aligned_cols=42  Identities=17%  Similarity=0.519  Sum_probs=36.0

Q ss_pred             CCCcccccccCCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           72 PKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        72 ~~~l~~H~~~H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      +..|..|+. |+|++||.|.+++|+++|.+.++|+.|+++ |.+
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~-Htg   45 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQT-HLE   45 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHH-HTT
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccc-ccC
Confidence            455667774 999999999888899999999999999998 544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=6.3e-12  Score=63.15  Aligned_cols=29  Identities=28%  Similarity=0.614  Sum_probs=27.7

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |||+|.|+.|+|+|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            79999999999999999999999999975

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=8.3e-12  Score=62.23  Aligned_cols=28  Identities=21%  Similarity=0.519  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +|||+|.+  |+|+|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            68999975  99999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=9.1e-12  Score=65.58  Aligned_cols=31  Identities=32%  Similarity=0.654  Sum_probs=28.2

Q ss_pred             CCCCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           82 ASSERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        82 H~~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |+|+|||+|.+  |+|.|.++++|++|+++ |..
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~-Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKV-HTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGG-GTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccc-cCC
Confidence            68999999988  99999999999999988 543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.3e-12  Score=66.52  Aligned_cols=28  Identities=32%  Similarity=0.583  Sum_probs=26.9

Q ss_pred             ccccCCChHHHHHHHHHhcCCCcccCCC
Q 026846            2 KAVAFSLDFNLRSHMKTHSQENYHICPY   29 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~p~~C~~   29 (232)
                      |+++|.++.+|++|+++|+|+|||+|.|
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            9999999999999999999999999964

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.4e-11  Score=63.35  Aligned_cols=30  Identities=30%  Similarity=0.557  Sum_probs=28.5

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +|||.|.|+.|+|+|.++.+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            689999999999999999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=8.6e-12  Score=61.90  Aligned_cols=28  Identities=36%  Similarity=0.844  Sum_probs=26.8

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |||+|.|+.|+|+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999999999999999999999999995

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.14  E-value=1.4e-11  Score=62.18  Aligned_cols=29  Identities=28%  Similarity=0.627  Sum_probs=26.5

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      |||+|.+  |+++|.++++|.+|+++|+|+|
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            6999976  9999999999999999998764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.2e-11  Score=60.65  Aligned_cols=29  Identities=34%  Similarity=0.725  Sum_probs=26.4

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKN   53 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   53 (232)
                      |||.|.+  |+++|.++++|.+|+++|+|+|
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            6999975  9999999999999999998753

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.4e-11  Score=60.53  Aligned_cols=29  Identities=45%  Similarity=0.962  Sum_probs=26.5

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |||.|.+++|||+|.++++|++|+++ |.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS-HTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH-TTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc-CcC
Confidence            68999999999999999999999988 554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=6.6e-11  Score=60.79  Aligned_cols=29  Identities=38%  Similarity=0.857  Sum_probs=26.8

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      +|||.|.++||+|+|.+.++|++|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            58999999999999999999999999854

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.1e-11  Score=59.84  Aligned_cols=27  Identities=41%  Similarity=1.054  Sum_probs=25.5

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||.|.+++|||+|.+.++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            689999999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.6e-11  Score=61.00  Aligned_cols=29  Identities=34%  Similarity=1.052  Sum_probs=26.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |||.|.+++|||+|++.++|++|+++ |.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI-HTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH-HHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccc-cCC
Confidence            68999999999999999999999998 543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8.1e-11  Score=60.16  Aligned_cols=30  Identities=30%  Similarity=0.760  Sum_probs=26.9

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |||.|.+++|||+|++.++|++|+++ |.++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-cccc
Confidence            68999988999999999999999988 6654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.6e-10  Score=57.44  Aligned_cols=26  Identities=19%  Similarity=0.707  Sum_probs=24.3

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      +|||+|.+  |+|+|.++++|.+|+++|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCC--CcCEecccccccccCCCc
Confidence            58999988  999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.4e-10  Score=58.10  Aligned_cols=27  Identities=37%  Similarity=0.920  Sum_probs=25.4

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||+|.+++|+|+|.+.++|++|+++|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCcc
Confidence            689999999999999999999999884

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.89  E-value=5.1e-10  Score=56.26  Aligned_cols=28  Identities=29%  Similarity=0.733  Sum_probs=24.9

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |||.|.+  ||++|.+.++|++|+++ |.++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~-HTgE   28 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRS-HTNE   28 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHT-TTSS
T ss_pred             CcCCCCC--CCCCCCCchHcccccCc-ccCC
Confidence            6899988  99999999999999998 6554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.6e-10  Score=54.37  Aligned_cols=26  Identities=31%  Similarity=0.570  Sum_probs=24.2

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |||+|.  .|||+|.++++|..|+|+|+
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCCC
Confidence            799996  69999999999999999995

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=6.6e-10  Score=53.80  Aligned_cols=25  Identities=32%  Similarity=0.626  Sum_probs=23.2

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||+|..  |||+|.++++|..|+|+|
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCC
Confidence            6999977  999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=8.2e-10  Score=55.38  Aligned_cols=27  Identities=33%  Similarity=0.812  Sum_probs=24.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |||.|.+  |||+|.++++|.+|+++ |.+
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~-Htg   27 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKT-HQN   27 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHG-GGC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCc-cCC
Confidence            6899988  99999999999999998 554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.6e-09  Score=58.25  Aligned_cols=32  Identities=28%  Similarity=0.616  Sum_probs=25.8

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhCCCCCC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMS  118 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~  118 (232)
                      +|||+|..  ||++|.+.++|++|++..|.+..+
T Consensus         3 ~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekp   34 (39)
T d2epsa1           3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERP   34 (39)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCC
T ss_pred             CCCccCCC--CCCCcCChHHhhccCcCccCCCcC
Confidence            68888877  888888888888888766777664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.7e-09  Score=51.02  Aligned_cols=29  Identities=38%  Similarity=0.832  Sum_probs=27.0

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      |||.|.+.+|+|+|+..+.|++|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999998774

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.3e-08  Score=49.13  Aligned_cols=29  Identities=31%  Similarity=0.723  Sum_probs=26.9

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |||.|.++.|+|++...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            69999999999999999999999998754

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-08  Score=46.15  Aligned_cols=26  Identities=38%  Similarity=0.754  Sum_probs=23.5

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |++|.+  |+|.|+.+..|..|+|.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            688976  99999999999999999974

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=6.3e-08  Score=45.93  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=24.0

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      +|||.|.+  ||+.|+++...++|.++|
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGG
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhc
Confidence            58999988  999999999999999885

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.37  E-value=1.2e-07  Score=44.71  Aligned_cols=27  Identities=44%  Similarity=0.846  Sum_probs=25.0

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      .||+|+.+||++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999998874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.6e-07  Score=45.62  Aligned_cols=28  Identities=18%  Similarity=0.428  Sum_probs=25.8

Q ss_pred             CcccCCCCCCCccccchhhHHHHH-HHhc
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHI-ASHH   50 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~-~~h~   50 (232)
                      |||.|.++.|.|+|+..+....|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            699999999999999999999998 7774

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=2.9e-07  Score=43.60  Aligned_cols=27  Identities=30%  Similarity=0.609  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      ++||.|.+  ||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            68999987  9999999999999999984

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.2e-07  Score=44.08  Aligned_cols=29  Identities=24%  Similarity=0.762  Sum_probs=25.7

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      +|||.|++  |+..|.++..|..|.+.|.++
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            58999988  999999999999999986543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.26  E-value=3.8e-07  Score=43.20  Aligned_cols=29  Identities=21%  Similarity=0.353  Sum_probs=27.6

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |||.|.+..|.|.|.+.-.|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            69999999999999999999999999986

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.6e-07  Score=46.23  Aligned_cols=30  Identities=23%  Similarity=0.722  Sum_probs=27.2

Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .+|||.|..+||+.+|.....|..|.++|-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            489999999999999999999999988753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.2e-07  Score=45.74  Aligned_cols=25  Identities=24%  Similarity=0.246  Sum_probs=19.0

Q ss_pred             CccccCCChHHHHHHHHHhcCCCcc
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQENYH   25 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~p~   25 (232)
                      +|||+|....+|.+|...|+|++||
T Consensus        10 ~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1          10 ICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4777777777777777777777776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.7e-07  Score=41.17  Aligned_cols=24  Identities=33%  Similarity=0.700  Sum_probs=21.6

Q ss_pred             CccCCcccccccccChHHHHHHHHhh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |++|..  |+|.|.++..|+.|+|.|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGC
T ss_pred             CCccch--hhhHhcchhHHHHHhhcc
Confidence            678977  999999999999999873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.6e-07  Score=42.55  Aligned_cols=28  Identities=25%  Similarity=0.383  Sum_probs=25.9

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      ++||+|++  |.++-..++.|..|+|.|+|
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeee--cccccCCchheEEeeecccC
Confidence            58999997  99999999999999999976

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.3e-06  Score=41.91  Aligned_cols=28  Identities=32%  Similarity=0.717  Sum_probs=25.9

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      ++||.|++  |+.+|..+..+.-|+|.|.|
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            58999976  99999999999999999975

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.4e-06  Score=42.84  Aligned_cols=31  Identities=29%  Similarity=0.560  Sum_probs=25.7

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCCCCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEKNAA   55 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   55 (232)
                      +...|.+  |||.|.....|.+|...|+++|||
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567865  999999999999999988777665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=8.7e-07  Score=42.95  Aligned_cols=29  Identities=38%  Similarity=0.785  Sum_probs=25.4

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      |||.|.+++|.|+|...+...+|+.+.|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            68999999999999999999999855464

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.4e-06  Score=40.52  Aligned_cols=29  Identities=34%  Similarity=0.714  Sum_probs=26.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPGH  116 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~  116 (232)
                      |||.|.+  |...-+.+++|+.|+++.|...
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccc--cccccccchhhhhhhhcccccC
Confidence            6899999  9999999999999999988754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.02  E-value=2e-06  Score=40.43  Aligned_cols=27  Identities=33%  Similarity=0.556  Sum_probs=25.5

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHh
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      .||+|....|+++|...+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999999988

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.9e-06  Score=40.20  Aligned_cols=26  Identities=38%  Similarity=0.828  Sum_probs=22.5

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      -+.|.  .|||+|.-++.|++|+..|+|
T Consensus         2 ~hvc~--ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           2 VHVCA--ECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CEECT--TTCCEESSHHHHHHHGGGTSC
T ss_pred             cchHH--HHhHHHHHHHHHHHHhhcccC
Confidence            46784  699999999999999999975

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=7.9e-06  Score=38.48  Aligned_cols=26  Identities=38%  Similarity=0.649  Sum_probs=23.1

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |.|.+  |+.+....+.|+.|+|.|++.
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            78976  999999999999999999764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.83  E-value=4.9e-06  Score=39.29  Aligned_cols=27  Identities=33%  Similarity=0.700  Sum_probs=24.7

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||.|..+||.|.|.....|.+|.-+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~th   27 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTH   27 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhccc
Confidence            689999999999999999999998764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=9.6e-06  Score=41.53  Aligned_cols=30  Identities=30%  Similarity=0.719  Sum_probs=27.9

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      .+|||.|..+.|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            479999999999999999999999999884

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1e-05  Score=37.90  Aligned_cols=28  Identities=39%  Similarity=0.836  Sum_probs=24.6

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      ++||+|..  |...-+.+++|..|+|+ |.+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~-htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRS-HTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTT-CCS
T ss_pred             CCcceeee--cccccCCchheEEeeec-ccC
Confidence            48999998  99999999999999998 543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.76  E-value=8.5e-06  Score=39.39  Aligned_cols=29  Identities=31%  Similarity=0.766  Sum_probs=26.0

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPGHM  117 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~  117 (232)
                      ||.|.+  |++.|+++.-|-+|++..|.+..
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g~c   29 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSGNL   29 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCCSS
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcCcC
Confidence            799988  99999999999999998888743

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.3e-05  Score=37.91  Aligned_cols=27  Identities=37%  Similarity=0.637  Sum_probs=24.4

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +||.|+|  |..+...+++|+.|+++.++
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccc--cccccccchhhhhhhhcccc
Confidence            6999998  99999999999999998643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.2e-05  Score=40.35  Aligned_cols=30  Identities=20%  Similarity=0.597  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCc---cccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGK---RYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~---~f~~~~~l~~H~~~h~~~   52 (232)
                      +-|.|.|..|.+   .|..+..|..|||.|+|+
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            358899988974   599999999999999863

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=9e-06  Score=38.30  Aligned_cols=24  Identities=33%  Similarity=0.831  Sum_probs=22.1

Q ss_pred             CccCCcccccccccChHHHHHHHHhh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      ||.|.+  |+.+|.++++|.+||+..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            799988  999999999999999863

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.2e-05  Score=37.36  Aligned_cols=27  Identities=22%  Similarity=0.325  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      .+||+|.+  |.++-...++|+.|+|+|.
T Consensus         1 vkp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCCccccc--ccchhcchhhHhhhhhccc
Confidence            37999986  9999999999999999984

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.3e-05  Score=37.17  Aligned_cols=25  Identities=32%  Similarity=0.672  Sum_probs=23.3

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |||+|..  |..+-...+.|.+|+|+|
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHS
T ss_pred             CCccccc--ccchhcchhhHhhhhhcc
Confidence            7999988  999999999999999984

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.3e-05  Score=37.89  Aligned_cols=27  Identities=33%  Similarity=0.695  Sum_probs=24.7

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      +||+|.+  |..-..+.++|.+|++..|.
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            6899999  99999999999999998775

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.7e-05  Score=41.19  Aligned_cols=26  Identities=23%  Similarity=0.694  Sum_probs=23.2

Q ss_pred             CCCCCccCCcccccccccChHHHHHHHH
Q 026846           83 SSERPYACPYEGCEKAYIHEYKLKLHLK  110 (232)
Q Consensus        83 ~~~k~~~C~~~~C~k~f~~~~~l~~H~~  110 (232)
                      +|-|||.|..  |+|.|..+..+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4689999977  9999999999999964

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2e-05  Score=40.88  Aligned_cols=28  Identities=21%  Similarity=0.420  Sum_probs=25.0

Q ss_pred             cCCCcccCCCCCCCccccchhhHHHHHHHh
Q 026846           20 SQENYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        20 ~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      +|.|||.|.+  |+|+|.++.++.+|....
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhhhh
Confidence            5889999986  999999999999998754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.47  E-value=4.4e-05  Score=34.38  Aligned_cols=23  Identities=26%  Similarity=0.740  Sum_probs=20.7

Q ss_pred             ccCCcccccccccChHHHHHHHHhh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |+|..  |.++|..++.|.+|++.|
T Consensus         1 ykcgl--cersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhh
Confidence            68988  999999999999998874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=6.3e-05  Score=35.32  Aligned_cols=23  Identities=17%  Similarity=0.226  Sum_probs=21.6

Q ss_pred             CccccCCChHHHHHHHHHhcCCC
Q 026846            1 MKAVAFSLDFNLRSHMKTHSQEN   23 (232)
Q Consensus         1 ~C~~~f~~~~~L~~H~~~H~~~~   23 (232)
                      |||......+-|..|+++|++++
T Consensus         6 ~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           6 ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccCcccCCHHHHHHHHHHhcCCC
Confidence            79999999999999999999975

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=5.2e-05  Score=34.13  Aligned_cols=23  Identities=22%  Similarity=0.525  Sum_probs=20.9

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |+|.+  |.++|.-++.|.+|+|.|
T Consensus         1 ykcgl--cersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhh
Confidence            68976  999999999999999987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=6.5e-05  Score=34.88  Aligned_cols=26  Identities=38%  Similarity=0.636  Sum_probs=21.2

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      .+.|..  |||+|..++.|++|.-. |.+
T Consensus         2 ~hvc~e--cgkaf~essklkrh~lv-htg   27 (28)
T d1ubdc2           2 VHVCAE--CGKAFVESSKLKRHQLV-HTG   27 (28)
T ss_dssp             CEECTT--TCCEESSHHHHHHHGGG-TSC
T ss_pred             cchHHH--HhHHHHHHHHHHHHhhc-ccC
Confidence            367866  99999999999999765 554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.39  E-value=6.4e-05  Score=34.57  Aligned_cols=26  Identities=35%  Similarity=0.760  Sum_probs=24.1

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHhc
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |.|.+..|+|+|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            78999999999999999999998885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=8.8e-05  Score=33.92  Aligned_cols=22  Identities=23%  Similarity=0.373  Sum_probs=15.5

Q ss_pred             ccccCCChHHHHHHHHHhcCCC
Q 026846            2 KAVAFSLDFNLRSHMKTHSQEN   23 (232)
Q Consensus         2 C~~~f~~~~~L~~H~~~H~~~~   23 (232)
                      |.|.|.++..|+.|.+.|+|++
T Consensus         6 c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           6 CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             hHHHHHHhHhhhhccccccCCC
Confidence            6677777777777777777664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=9.9e-05  Score=33.74  Aligned_cols=25  Identities=36%  Similarity=0.757  Sum_probs=22.1

Q ss_pred             cCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           26 ICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        26 ~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      .|+  .|.|.|.++..|+.|-|.|+|+
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCc--chHHHHHHhHhhhhccccccCC
Confidence            575  5999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.9e-05  Score=35.43  Aligned_cols=24  Identities=25%  Similarity=0.535  Sum_probs=21.8

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHh
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      ||.|.+  |..+|..+.+|..||+..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHSS
T ss_pred             Ccccce--eeeeEeeccchhHhhhhh
Confidence            799986  999999999999999864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.26  E-value=9.1e-05  Score=35.43  Aligned_cols=30  Identities=33%  Similarity=0.861  Sum_probs=27.4

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcCC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHEK   52 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~   52 (232)
                      |.|.|.|+.|+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            579999999999999999999999999863

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00015  Score=34.11  Aligned_cols=27  Identities=22%  Similarity=0.460  Sum_probs=23.9

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      |||+|.|  |..--.+.++|..|++..++
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            6999998  99999999999999987554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=0.00013  Score=33.55  Aligned_cols=25  Identities=36%  Similarity=0.774  Sum_probs=22.4

Q ss_pred             ccCCcccccccccChHHHHHHHHhh
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |.|.+++|+|+|.....|+.|+-+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            7888899999999999999998764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=1.6e-05  Score=39.83  Aligned_cols=24  Identities=29%  Similarity=0.982  Sum_probs=11.8

Q ss_pred             ccCCccccc---ccccChHHHHHHHHh
Q 026846           88 YACPYEGCE---KAYIHEYKLKLHLKR  111 (232)
Q Consensus        88 ~~C~~~~C~---k~f~~~~~l~~H~~~  111 (232)
                      |.|...+|.   +.|..+-.|..|+|+
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~   29 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRR   29 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHH
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhh
Confidence            344444443   335555555566555

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.00029  Score=32.97  Aligned_cols=28  Identities=25%  Similarity=0.604  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      +..|.|.+  |...|..+-.|+.||..|+|
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccC
Confidence            46789986  99999999999999999976

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.04  E-value=0.00024  Score=36.51  Aligned_cols=28  Identities=18%  Similarity=0.540  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           22 ENYHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        22 ~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      .+.|+|.+  |++.|.+...|--||+.|..
T Consensus         3 ~r~~~C~~--C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSF--CKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTT--TCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCC--CCCccCCcccccchHhhhcc
Confidence            46799987  99999999999999999954

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.01  E-value=0.00025  Score=31.97  Aligned_cols=25  Identities=32%  Similarity=0.805  Sum_probs=22.5

Q ss_pred             ccCCcccccccccChHHHHHHHHhhCC
Q 026846           88 YACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        88 ~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      |.|++  |-|-|+++.+|..|.++.|.
T Consensus         2 ypcp~--cfkeftrkdnm~ahvkiihk   26 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKIIHK   26 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cCCch--hhHHhccccCceEEEEEecC
Confidence            78988  99999999999999998763

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.95  E-value=0.00037  Score=35.77  Aligned_cols=27  Identities=22%  Similarity=0.653  Sum_probs=23.8

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhhC
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKREH  113 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~h  113 (232)
                      .+.|.|.+  |++.|.....|--|++.|.
T Consensus         3 ~r~~~C~~--C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSF--CKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTT--TCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCC--CCCccCCcccccchHhhhc
Confidence            46799988  9999999999999998743

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00029  Score=32.76  Aligned_cols=24  Identities=33%  Similarity=0.790  Sum_probs=21.0

Q ss_pred             cCCcccccccccChHHHHHHHHhh
Q 026846           89 ACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        89 ~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      .|+..+|+|.|+..+.|++|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            577788999999999999999773

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00032  Score=32.81  Aligned_cols=26  Identities=27%  Similarity=0.632  Sum_probs=22.4

Q ss_pred             cCCcccccccccChHHHHHHHHhhCC
Q 026846           89 ACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        89 ~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|.++|||+.|..+..|..|++..|-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHHh
Confidence            47778999999999999999887653

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.73  E-value=0.0007  Score=31.73  Aligned_cols=29  Identities=24%  Similarity=0.687  Sum_probs=25.5

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      |.|.|...+|..+|..+.+|++|-.+.|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            35789888999999999999999988775

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.73  E-value=0.00057  Score=30.62  Aligned_cols=24  Identities=25%  Similarity=0.783  Sum_probs=21.0

Q ss_pred             CccCCcccccccccChHHHHHHHHhh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      ||+|..  |...|.++..|..|+-..
T Consensus         2 pykcss--csqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHHHT
T ss_pred             CCcccH--HHHHHHHHHHHHHHHHhc
Confidence            799976  999999999999998543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.38  E-value=0.00095  Score=32.05  Aligned_cols=23  Identities=17%  Similarity=0.365  Sum_probs=20.8

Q ss_pred             cccCCCCCCCccccchhhHHHHHHH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIAS   48 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~   48 (232)
                      ||.|.+  |++.|..+.-|.+|+..
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTT
T ss_pred             Cccccc--ccchhhHHHHHHHHHHH
Confidence            799976  99999999999999765

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0025  Score=29.38  Aligned_cols=24  Identities=21%  Similarity=0.407  Sum_probs=21.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHh
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |-+|.  .|.++..++..|+.|.|+|
T Consensus         2 pekc~--ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGG
T ss_pred             CccCc--ccccccCcHHHHHHhhccc
Confidence            56884  7999999999999999998

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.86  E-value=0.004  Score=28.49  Aligned_cols=23  Identities=39%  Similarity=0.674  Sum_probs=20.3

Q ss_pred             cccCCCCCCCccccchhhHHHHHHH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIAS   48 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~   48 (232)
                      ||.|.  .|||.|..+.+|..|...
T Consensus         1 pf~c~--kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHHHH
Confidence            79995  699999999999999764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.74  E-value=0.0054  Score=28.50  Aligned_cols=26  Identities=23%  Similarity=0.737  Sum_probs=22.8

Q ss_pred             CCCccCCcccccccccChHHHHHHHHhh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      +..|.|..  |..+|.++-.|+.|+-.|
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvsh   27 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSH   27 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHH
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecc
Confidence            46789988  999999999999999774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.68  E-value=0.0046  Score=28.27  Aligned_cols=23  Identities=39%  Similarity=0.860  Sum_probs=20.2

Q ss_pred             CccCCcccccccccChHHHHHHHHh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      ||.|..  |||.|-++.+|..|..+
T Consensus         1 pf~c~k--cgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHHH
Confidence            689977  99999999999999654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0049  Score=28.64  Aligned_cols=24  Identities=25%  Similarity=0.725  Sum_probs=21.1

Q ss_pred             cCCCCCCCccccchhhHHHHHHHh
Q 026846           26 ICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        26 ~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      .|.++.|++-|+.+..|.-|.+-.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHH
Confidence            588889999999999999998764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0026  Score=31.20  Aligned_cols=24  Identities=17%  Similarity=0.512  Sum_probs=20.9

Q ss_pred             CccCCcccccccccChHHHHHHHHhh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      .|.|..  |||+|.++..|.+|....
T Consensus         4 afvcsk--cgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHC
T ss_pred             eeeecc--cccchhcchHHHHHhhhc
Confidence            488977  999999999999998763

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.51  E-value=0.0042  Score=27.70  Aligned_cols=24  Identities=17%  Similarity=0.516  Sum_probs=20.9

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHH
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIAS   48 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~   48 (232)
                      .||+|.  .|...|.++..|+.||..
T Consensus         1 mpykcs--scsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           1 MPYKCS--SCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHH
T ss_pred             CCCccc--HHHHHHHHHHHHHHHHHh
Confidence            389997  499999999999999863

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.34  E-value=0.007  Score=27.07  Aligned_cols=23  Identities=22%  Similarity=0.610  Sum_probs=20.4

Q ss_pred             ccCCCCCCCccccchhhHHHHHHHh
Q 026846           25 HICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        25 ~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      |.|++  |-|-|.++.++..|+++-
T Consensus         2 ypcp~--cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEEe
Confidence            78976  999999999999998874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0051  Score=32.80  Aligned_cols=27  Identities=22%  Similarity=0.461  Sum_probs=22.9

Q ss_pred             CCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      -.|.|..  |||.|.....|+.|.-. |..
T Consensus         5 ~l~pCG~--CgK~Ftd~~rLr~HEAQ-HG~   31 (53)
T d2eppa1           5 GILPCGL--CGKVFTDANRLRQHEAQ-HGV   31 (53)
T ss_dssp             CCCCCTT--TCCCCSCHHHHHHHHHH-HTT
T ss_pred             ceeeccc--cccccCCHHHHhHhHHh-cCc
Confidence            4589988  99999999999999876 443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.95  E-value=0.011  Score=28.01  Aligned_cols=27  Identities=33%  Similarity=0.862  Sum_probs=23.9

Q ss_pred             CCccCCcccccccccChHHHHHHHHhh
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |.|.|.++.|+..|...-.|..|+-.|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckH   28 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKH   28 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHH
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhh
Confidence            568999999999999999999998764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.01  Score=27.17  Aligned_cols=26  Identities=27%  Similarity=0.796  Sum_probs=22.9

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|.|+.  |+....+++.|+.|++..|.
T Consensus         2 k~qcph--c~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCc--chhheeehhhhhHHhhhccc
Confidence            378987  99999999999999998774

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.029  Score=30.44  Aligned_cols=37  Identities=30%  Similarity=0.557  Sum_probs=32.3

Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhCCCCCCCc
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDE  120 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~~~  120 (232)
                      ..+||.|-..||..+|+-..+|.-|-+..|....+..
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s~lp~~   53 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAF   53 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCC
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhhcCchh
Confidence            4689999999999999999999999999898766544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.022  Score=26.20  Aligned_cols=25  Identities=24%  Similarity=0.685  Sum_probs=20.3

Q ss_pred             cCCCCCCCccccchhhHHHHHHHhc
Q 026846           26 ICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        26 ~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      .|+-..|.|.|...+.++.|+-+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            3555579999999999999988773

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.021  Score=30.39  Aligned_cols=25  Identities=32%  Similarity=0.658  Sum_probs=22.5

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhc
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      .|.|.+  |+|.|.....|+.|..-|.
T Consensus         6 l~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccc--cccccCCHHHHhHhHHhcC
Confidence            588986  9999999999999998884

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.024  Score=27.61  Aligned_cols=26  Identities=19%  Similarity=0.581  Sum_probs=22.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhcC
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHHE   51 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~~   51 (232)
                      .|.|.  .|+|.|..+..+.+|.-..+|
T Consensus         4 afvcs--kcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCS--KCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECS--SSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeec--ccccchhcchHHHHHhhhcCC
Confidence            58996  699999999999999887765

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.97  E-value=0.054  Score=28.63  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=26.2

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhcCCCC
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHHEKNA   54 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   54 (232)
                      .+.|..|++  |+....++.+|++|+-..+-.||
T Consensus        21 s~qpatcpi--c~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPI--CYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTT--TCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCch--HHHHHHHHHHHHHHHHHHhhccC
Confidence            467899976  99999999999999987654433

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.36  E-value=0.058  Score=26.32  Aligned_cols=30  Identities=27%  Similarity=0.570  Sum_probs=25.8

Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhCCC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREHPG  115 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~~  115 (232)
                      |...|.|.+  |.++|+.-+++.+|--+.|..
T Consensus         5 g~~~yRC~~--C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKV--CSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTT--TCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeeh--hhHHHHHHHHHHHHHHhhccc
Confidence            466799988  999999999999998776754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.91  E-value=0.086  Score=24.37  Aligned_cols=27  Identities=19%  Similarity=0.490  Sum_probs=23.0

Q ss_pred             CcccCCCCCCCccccchhhHHHHHHHh
Q 026846           23 NYHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        23 ~p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      +.|+|....|..+|..+.+++.|....
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrf   27 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRF   27 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhh
Confidence            358888788999999999999998654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.88  E-value=0.19  Score=26.44  Aligned_cols=29  Identities=34%  Similarity=0.616  Sum_probs=25.6

Q ss_pred             CCCCccCCcccccccccChHHHHHHHHhhCC
Q 026846           84 SERPYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        84 ~~k~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .+.|-.|++  |+....++.+|++|+...|-
T Consensus        21 s~qpatcpi--c~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          21 SEQPATCPI--CYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TSCCEECTT--TCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCCCCch--HHHHHHHHHHHHHHHHHHhh
Confidence            478999988  99999999999999987664

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.071  Score=24.37  Aligned_cols=24  Identities=21%  Similarity=0.472  Sum_probs=20.2

Q ss_pred             CccCCcccccccccChHHHHHHHHhh
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKRE  112 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~  112 (232)
                      |-+|..  |..+...+..|+.|.|+|
T Consensus         2 pekc~e--csyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSE--CSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHGGG
T ss_pred             CccCcc--cccccCcHHHHHHhhccc
Confidence            567865  999999999999998874

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.088  Score=23.96  Aligned_cols=24  Identities=25%  Similarity=0.516  Sum_probs=20.7

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHh
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      .|.|+  +|.-....++.|+.|++.-
T Consensus         2 k~qcp--hc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCP--HCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHHHT
T ss_pred             CccCC--cchhheeehhhhhHHhhhc
Confidence            37894  7999999999999999874

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.16  Score=25.02  Aligned_cols=30  Identities=13%  Similarity=0.307  Sum_probs=24.0

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCCCCCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHPGHMS  118 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~~~~~  118 (232)
                      ...|-.  |.++|.....+.+|+-..|+....
T Consensus         3 kltcle--cmrtfkssfsiwrhqvevhnqn~m   32 (41)
T d1wjpa3           3 KLTCLE--CMRTFKSSFSIWRHQVEVHNQNNM   32 (41)
T ss_dssp             GGEEGG--GTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             cccHHH--HHHHHHHHHHHHHhhheecccccc
Confidence            456844  999999999999998887876543

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.52  E-value=0.21  Score=23.89  Aligned_cols=26  Identities=27%  Similarity=0.709  Sum_probs=21.6

Q ss_pred             cCCcccccccccChHHHHHHHHhhCC
Q 026846           89 ACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        89 ~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|...+|++-|.+...|..|+..-|.
T Consensus         3 nChW~~C~~eFdtQd~LV~HinndHI   28 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINSEHI   28 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTS
T ss_pred             cccccccccccCCHHHHHHHcccccc
Confidence            36667799999999999999987554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.31  E-value=0.071  Score=31.07  Aligned_cols=25  Identities=24%  Similarity=0.495  Sum_probs=21.5

Q ss_pred             CCCccCCcccccccccChHHHHHHHHh
Q 026846           85 ERPYACPYEGCEKAYIHEYKLKLHLKR  111 (232)
Q Consensus        85 ~k~~~C~~~~C~k~f~~~~~l~~H~~~  111 (232)
                      ...|-|..  |+|.|.+...|..|+++
T Consensus        13 ~gqfYCv~--C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLA--CARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             CCEEeccc--ccCccCCHHHHHHHHcc
Confidence            34588987  99999999999999875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.96  E-value=0.18  Score=24.19  Aligned_cols=23  Identities=22%  Similarity=0.418  Sum_probs=20.0

Q ss_pred             CCccCCcccccccccChHHHHHHHH
Q 026846           86 RPYACPYEGCEKAYIHEYKLKLHLK  110 (232)
Q Consensus        86 k~~~C~~~~C~k~f~~~~~l~~H~~  110 (232)
                      ..|.|.-  ||-.|...+.|..|+.
T Consensus         7 arf~c~p--cgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTT--TCCBCSCHHHHHHHTT
T ss_pred             cceeccc--cceeecChhHHHhhhh
Confidence            4589976  9999999999999965

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.35  E-value=0.33  Score=23.18  Aligned_cols=24  Identities=25%  Similarity=0.625  Sum_probs=21.1

Q ss_pred             cCCCCCCCccccchhhHHHHHHHh
Q 026846           26 ICPYPDCGKRYAHEYKLKNHIASH   49 (232)
Q Consensus        26 ~C~~~~C~~~f~~~~~l~~H~~~h   49 (232)
                      -|.|..|+.-|.++..|-.|+..-
T Consensus         3 nChW~~C~~eFdtQd~LV~Hinnd   26 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINSE   26 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHcccc
Confidence            478889999999999999999874

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.23  E-value=0.52  Score=21.65  Aligned_cols=26  Identities=23%  Similarity=0.441  Sum_probs=22.1

Q ss_pred             CccCCcccccccccChHHHHHHHHhhCC
Q 026846           87 PYACPYEGCEKAYIHEYKLKLHLKREHP  114 (232)
Q Consensus        87 ~~~C~~~~C~k~f~~~~~l~~H~~~~h~  114 (232)
                      .|.|..  |||.......|+.|+---|+
T Consensus         2 ~ftc~h--cgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHH--CGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechh--HHHHHhhccCceEEEeeccc
Confidence            478988  99999999999999876554

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.75  E-value=0.56  Score=25.20  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=26.7

Q ss_pred             cCCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           20 SQENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        20 ~~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      +..|||.|-...|-.+|.-+.+|..|-+.-+
T Consensus        16 spyrpyrcvhqgc~aaftiq~nlilhy~avh   46 (61)
T d1x3ca1          16 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVH   46 (61)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCceeeeccchhhhhhhhhhHHHHHHHHh
Confidence            4578999988889999999999999987643

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.64  E-value=0.35  Score=23.45  Aligned_cols=28  Identities=25%  Similarity=0.507  Sum_probs=23.8

Q ss_pred             CCCcccCCCCCCCccccchhhHHHHHHHhc
Q 026846           21 QENYHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        21 ~~~p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      |...|.|.+  |.+.+..-+++-+|-.+-+
T Consensus         5 g~~~yRC~~--C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKV--CSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeeh--hhHHHHHHHHHHHHHHhhc
Confidence            566799987  9999999999999977643

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=84.99  E-value=0.29  Score=23.42  Aligned_cols=22  Identities=27%  Similarity=0.600  Sum_probs=19.1

Q ss_pred             cccCCCCCCCccccchhhHHHHHH
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIA   47 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~   47 (232)
                      .|.|.  .||-+|++.+.|..|+.
T Consensus         8 rf~c~--pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCL--PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCT--TTCCBCSCHHHHHHHTT
T ss_pred             ceecc--ccceeecChhHHHhhhh
Confidence            48895  59999999999999875

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.21  E-value=0.96  Score=20.71  Aligned_cols=25  Identities=28%  Similarity=0.628  Sum_probs=20.6

Q ss_pred             cccCCCCCCCccccchhhHHHHHHHhc
Q 026846           24 YHICPYPDCGKRYAHEYKLKNHIASHH   50 (232)
Q Consensus        24 p~~C~~~~C~~~f~~~~~l~~H~~~h~   50 (232)
                      .|.|.  +|||...+...++-|+-..+
T Consensus         2 ~ftc~--hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCH--HCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCS--SSCCCCSSHHHHHHHHHHHT
T ss_pred             ceech--hHHHHHhhccCceEEEeecc
Confidence            47896  69999999999999976543