Citrus Sinensis ID: 026853
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | 2.2.26 [Sep-21-2011] | |||||||
| Q08623 | 228 | Pseudouridine-5'-monophos | yes | no | 0.922 | 0.938 | 0.399 | 1e-34 | |
| Q9D5U5 | 234 | Pseudouridine-5'-monophos | yes | no | 0.961 | 0.952 | 0.378 | 2e-32 | |
| Q94529 | 231 | Probable pseudouridine-5' | no | no | 0.939 | 0.943 | 0.373 | 5e-31 | |
| O14165 | 249 | Uncharacterized protein C | yes | no | 0.926 | 0.863 | 0.284 | 2e-19 | |
| O59760 | 236 | Putative uncharacterized | no | no | 0.849 | 0.834 | 0.299 | 6e-17 | |
| Q86ZR7 | 236 | Putative uncharacterized | yes | no | 0.935 | 0.919 | 0.3 | 3e-16 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | no | no | 0.853 | 0.872 | 0.284 | 7e-16 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.758 | 0.814 | 0.301 | 1e-15 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.745 | 0.920 | 0.318 | 2e-15 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.870 | 0.918 | 0.287 | 1e-14 |
| >sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A II++ LP +
Sbjct: 11 LIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMS 70
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E V E + + +PGA +LI HL HG+P ALA++S A+ + K S +
Sbjct: 71 KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEF 130
Query: 132 NESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGME 187
FS +++G D EV+ GKP PDIFL AKR + P+ LV ED+ GV A AAGM+
Sbjct: 131 FSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQ 190
Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
VV VP T A V+NSL D +PE +GLP ++
Sbjct: 191 VVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: nEC: 6 |
| >sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1 | Back alignment and function description |
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Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 4/227 (1%)
Query: 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV 63
P + ++ +I DLDG +LNT+ ++++V + +YGK+++ K ++GK LE A IV
Sbjct: 8 PQFRPVTPLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIV 67
Query: 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E LP +K E + E L +PGA LI HL H +P ALA++S T ++
Sbjct: 68 EFLNLPISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQT 127
Query: 124 KISYQHGWNESF-SVIVGSD-EVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVV 179
K S G+ F +++G D EV+ GKP DIFL AKR + +P LV EDS GV
Sbjct: 128 KTSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVE 187
Query: 180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
A GM+VV VP A V++SL D +PE +GLP F +
Sbjct: 188 AAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2 | Back alignment and function description |
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Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 12/230 (5%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
L+K+ CV D+DG LL+T+ +++ + L YGK + K +++G A +VE
Sbjct: 6 LRKVTHCV-FDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
Y LP + E+ + + + + +PGA RL++HL + VP LA++S +E K
Sbjct: 65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
+ QH E FS+ + GS EV GKP+PDIFL AA R + +PS LV EDS
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GV A +AGM+VV VP + + A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2 | Back alignment and function description |
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Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEA 59
MA K M+C + D+DG L++++ ++++ L +YGK+ K +++G+ A
Sbjct: 1 MAAKHVKYMAC-LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAA 59
Query: 60 AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA 119
++++ +P +FV+E + + +K +PGA LI +LS HG+ + LA++S+ A
Sbjct: 60 KVVIDWSNIPMTPQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGLATSSNTA 119
Query: 120 TIESKISYQHGWNESF--SVIVGSDEVRT---GKPSPDIFLEAAKRLN----------ME 164
K ++ E F +VI G + GKP PDI+L+ +N +
Sbjct: 120 NYNMKTAHLKHIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALT 179
Query: 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
PS + EDS+ GV + KAAGM V+ VP + +E+++S + P
Sbjct: 180 PSQCIAFEDSIPGVKSAKAAGMHVIWVPDAAIKNLVGDQLNEIVDSQCETLP 231
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 13 ILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+DG L++T+ ++++ L +Y K + K K++G+T E + I ++ G+
Sbjct: 7 LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLT 66
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
E++ ++ K LPG L+ L +P+ALA++S E K ++
Sbjct: 67 CEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
Query: 132 NESF--SVIVGSDE---VRTGKPSPDIFLEAAKRLN----------MEPSSSLVIEDSVI 176
+ F ++I G D V GKP PDI+ A K +N + P + LV EDS+
Sbjct: 127 FDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSIT 186
Query: 177 GVVAGKAAGMEVVAVPSL---------PKQTHRYTAADEVINSLLDL 214
GV +G+AAGM+VV VP + P+Q AAD+ I +L L
Sbjct: 187 GVQSGRAAGMKVVWVPDVNILPFFSLSPEQ-----AADKHITKVLSL 228
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A PE=1 SV=2 | Back alignment and function description |
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Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---EWDGREKHKIVGKTPLE 57
M P+ + + D+DG L+NT+ +++E L L ++GK WD K K+ G E
Sbjct: 1 MTHPVA--VKACLFDMDGLLINTEDIYTETLNETLAEFGKGPLTWD--VKIKLQGLPGPE 56
Query: 58 EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
++E Y LP E+ ++ S + LPGA L+K+L +P+AL ++S+
Sbjct: 57 AGKRVIEHYKLPITLDEYDERNVALQSLKWGTCEFLPGALNLLKYLKLKNIPIALCTSSN 116
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLN------MEPSS 167
+ K S+ + F IV D+ R GKP PDI+ K LN ++P
Sbjct: 117 KTKFRGKTSHLEEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKELNEKFHTDIKPDE 176
Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS------LPKQTHRYTAADEVINSLLDLRPEKWGL 221
+V ED + GV + KA G V+ VP L E+++SL L K+GL
Sbjct: 177 CIVFEDGIPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSSLEKLEMSKYGL 236
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
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Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTP--LEEAAIIVED 65
+ +I D+DGTL T+ + + G +W +E ++ + +T E A E+
Sbjct: 3 LKALIFDVDGTLAETEEVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHREN 62
Query: 66 YG----------LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
G L AK + E+ + +V LPG LI G+ +A+A+
Sbjct: 63 LGSGPSDAKIADLHKAKTQRYVEIIAS-----GQVGLLPGVAELIDRAKASGLRLAIATT 117
Query: 116 SHRATIESKI--SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
+ RA +++ I ++ + F VI DEV KP+PD++L A + L + P++ L ED
Sbjct: 118 TTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFED 177
Query: 174 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211
S G+ + +AAG+ VV PS + ++AAD I L
Sbjct: 178 SRAGLASARAAGLRVVLTPSEYTRGDDFSAADWRIPDL 215
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Rhodobacter capsulatus (taxid: 1061) |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
M VI D+DG L++T+ ++ E + YGK + +I+G E I++E +
Sbjct: 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEI 60
Query: 69 PCAKHEFVNEVYS----MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS-HRATIES 123
+ F V+ +FS+ L K PG ++ + + +ALA+++ R +E
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELL---KENPGVREALEFVKSKRIKLALATSTPQREALER 117
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ + F V+V D+V+ GKP P+I+L +RLN+ P +V EDS GV A K+
Sbjct: 118 --LRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS 175
Query: 184 AGMEVV 189
AG+E +
Sbjct: 176 AGIERI 181
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Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D+DGT+L+T+ + + L YG ++D + + G A I+E
Sbjct: 8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLD 67
Query: 72 KHEFVNE----VYSMFSDHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKIS 126
H E V SM D V+ LP + ++K S HG PMA+ + S A E+ ++
Sbjct: 68 PHALAREKTEAVRSMLLD---SVEPLPLVD-VVK--SWHGRRPMAVGTGSESAIAEALLA 121
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186
+ G F +V +D V+ KP+PD FL A+R+ ++P+ +V ED+ G+ A +AAGM
Sbjct: 122 HL-GLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM 180
Query: 187 EVVAV 191
+ V V
Sbjct: 181 DAVDV 185
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-----WDGREKHKIVGKTPLEEAAII 62
++ +I D DG +L+T+ EVL+ ++G W G+ G P E +
Sbjct: 1 MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVW-GKVIGTAAGFRPFE---YL 56
Query: 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
E G E F+ + KA PG + G+ + LAS+S +
Sbjct: 57 EEQIGKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVS 116
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ Q G + F VI +D+V KP+P+++L AAK L + P+ L EDSV G +A K
Sbjct: 117 GHLK-QIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAK 175
Query: 183 AAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
AGM+ V VP+ T + D + S+ ++
Sbjct: 176 RAGMKCVIVPNKVTGTLMFEDYDHRLESMAEM 207
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Bacillus subtilis (strain 168) (taxid: 224308) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | ||||||
| 255567401 | 382 | riboflavin kinase/fmn adenylyltransferas | 0.974 | 0.591 | 0.743 | 5e-95 | |
| 147846786 | 891 | hypothetical protein VITISV_023071 [Viti | 0.982 | 0.255 | 0.732 | 2e-94 | |
| 297804002 | 380 | ATFMN [Arabidopsis lyrata subsp. lyrata] | 0.974 | 0.594 | 0.725 | 3e-92 | |
| 359495472 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.969 | 0.579 | 0.728 | 2e-91 | |
| 356521303 | 377 | PREDICTED: pseudouridine-5'-monophosphat | 0.952 | 0.586 | 0.737 | 2e-91 | |
| 224066785 | 381 | predicted protein [Populus trichocarpa] | 0.969 | 0.590 | 0.730 | 7e-91 | |
| 224082356 | 382 | predicted protein [Populus trichocarpa] | 0.974 | 0.591 | 0.721 | 9e-91 | |
| 359495493 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.969 | 0.579 | 0.72 | 1e-90 | |
| 42567011 | 379 | riboflavin kinase [Arabidopsis thaliana] | 0.974 | 0.596 | 0.716 | 3e-90 | |
| 357475891 | 377 | Riboflavin kinase [Medicago truncatula] | 0.952 | 0.586 | 0.733 | 8e-89 |
| >gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/226 (74%), Positives = 191/226 (84%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA PLKK +SCVILDLDGTLLNTDG+ S++LK FLVKYGK+WDGRE ++IVGKTP E AA
Sbjct: 3 MANPLKKFVSCVILDLDGTLLNTDGIVSDILKVFLVKYGKQWDGREGNRIVGKTPFEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF+ E+ MFSD CK+K LPGANRLIKH H VPMALASNS RA
Sbjct: 63 TIVEDYKLPCPTEEFIAEITPMFSDQWCKIKPLPGANRLIKHFIGHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFS+I+G DEV+ GKPSP+IFLEAA+RLN+EPSS LVIEDS+ GV+
Sbjct: 123 IEAKISCHEGWKESFSIIIGGDEVKAGKPSPEIFLEAARRLNIEPSSCLVIEDSLPGVMG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAGMEVVAVPS+PKQ+H YTAADEVINSLLDL+PEKWGLP F+D
Sbjct: 183 GKAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFED 228
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 196/228 (85%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 484 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 543
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL HGVP+ALASNS RA+I
Sbjct: 544 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 603
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 604 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 663
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDCKP 229
KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE WGLP FQDCKP
Sbjct: 664 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEXWGLPSFQDCKP 711
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/226 (72%), Positives = 189/226 (83%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVG+TPLE A
Sbjct: 3 MSNSLKKLTSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGQTPLEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDYGLPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYGLPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKIS+ GW E FSVIVGSDEV GKPSPDIFLEAAKRLN +P+ LVIEDSV GV+A
Sbjct: 123 IESKISHHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLNKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAG V+AVPSLPKQTH YT+ADEVINSLLD+RPEKWGLPPFQD
Sbjct: 183 GKAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQD 228
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 193/225 (85%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL H VPMALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHRVPMALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE+WGLP FQD
Sbjct: 184 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQD 228
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 183/221 (82%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KI+G TP E AA +V+D
Sbjct: 5 KKLIRCVILDLDGTLLNTDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQD 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
Y LPC+ EF++E+ +FSD C +KALPGANRL+KHL HGVPMALASNS R +IE+KI
Sbjct: 65 YQLPCSAIEFLSEISPLFSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
SY GW SFSVI+G DEVRTGKPSP+IFLEAA+RLNMEPSS LVIEDS+ GV AGK A
Sbjct: 125 SYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
MEVV VPSLPKQ+H YTAADEVINSLLDLR EKWGLPPF+D
Sbjct: 185 MEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFED 225
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 190/226 (84%), Gaps = 1/226 (0%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKKL+S VILDLDGTLL+TDG+ S+VLK F+VKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 IAKPLKKLVSAVILDLDGTLLHTDGIVSDVLKVFVVKYGKQWDGRETQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDY LPC+ +F+ ++ + D C +KALPGANRLIKHLS H VPMALASNS RA
Sbjct: 63 AVVEDYELPCSTDDFLTQITPLLYDQWCSIKALPGANRLIKHLSSHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW SFSVI+ DEVRTGKPSP+IFLEAAKRLN++PSS LVIEDS+ GV
Sbjct: 123 IESKISYHQGWKGSFSVIIAGDEVRTGKPSPEIFLEAAKRLNVKPSSCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAGMEVVAVPS+PK +H YT ADEVINSLLDL+PE WGLPPF+D
Sbjct: 183 GKAAGMEVVAVPSIPK-SHLYTEADEVINSLLDLQPELWGLPPFED 227
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 163/226 (72%), Positives = 187/226 (82%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKK ++ VILDLDGTL++TDG+ +VLK L+KYGK+WDGRE KIVGKTPLEEAA
Sbjct: 3 IAKPLKKAVAAVILDLDGTLIHTDGILGDVLKALLLKYGKQWDGREAQKIVGKTPLEEAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I+V DY LPC+ EFV ++ + D C +KALPGANRLIKHLS H VP+ALASNS RA
Sbjct: 63 IVVGDYELPCSIDEFVTQITPLLYDQFCNIKALPGANRLIKHLSGHNVPLALASNSPRAY 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISYQ GW ESFSVI+ DEVR GKPSP+IFLEAAKRLN+EPS LVIEDS+ GV
Sbjct: 123 IESKISYQQGWKESFSVIIAGDEVRAGKPSPEIFLEAAKRLNIEPSRCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAA MEVVAVPS+PKQTH Y AADEVI+SLLDL+PE WGLPPF D
Sbjct: 183 GKAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDD 228
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/225 (72%), Positives = 191/225 (84%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL HGVP+ALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IF EA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFFEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
KAAGMEVVAVPS+P Q+H + +ADEVINSLLDLRPE WGLP FQD
Sbjct: 184 KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQD 228
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42567011|ref|NP_193878.2| riboflavin kinase [Arabidopsis thaliana] gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana] gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana] gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana] gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/226 (71%), Positives = 187/226 (82%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQD
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQD 228
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357475891|ref|XP_003608231.1| Riboflavin kinase [Medicago truncatula] gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula] gi|355509286|gb|AES90428.1| Riboflavin kinase [Medicago truncatula] gi|388509552|gb|AFK42842.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 185/221 (83%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++L+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KIVGKTPLE A+ +VED
Sbjct: 5 RRLIKCVILDLDGTLLNTDGIVCNVLKVSLGKYGKEWDGRETLKIVGKTPLEAASAVVED 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
YGLPC+ EFV+E+ FSD C +KALPGANRLIKHL +GVPMALASNS R +I++KI
Sbjct: 65 YGLPCSPIEFVSELSPQFSDQWCNIKALPGANRLIKHLKSNGVPMALASNSPRESIDAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
S+ GW +SFSVI+G DEVRTGKPSPDIF EAA+RL +EPSS LVIEDS+ GV AGKAA
Sbjct: 125 SFHDGWKDSFSVIIGGDEVRTGKPSPDIFFEAARRLKIEPSSCLVIEDSLPGVTAGKAAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
MEVVAVPSLPKQ+H +TAADEVINSLLDL+ EKWGLPPF D
Sbjct: 185 MEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFAD 225
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 232 | ||||||
| TAIR|locus:2119647 | 379 | FMN/FHY "riboflavin kinase/FMN | 0.974 | 0.596 | 0.672 | 3.8e-78 | |
| TAIR|locus:2174567 | 240 | GS1 [Arabidopsis thaliana (tax | 0.849 | 0.820 | 0.395 | 1.3e-31 | |
| UNIPROTKB|E2R8L4 | 233 | HDHD1 "Uncharacterized protein | 0.857 | 0.854 | 0.384 | 2.3e-30 | |
| TAIR|locus:2117512 | 298 | GPP1 "glycerol-3-phosphatase 1 | 0.849 | 0.661 | 0.376 | 3e-30 | |
| UNIPROTKB|Q08623 | 228 | HDHD1 "Pseudouridine-5'-monoph | 0.862 | 0.877 | 0.392 | 7.9e-30 | |
| UNIPROTKB|Q2KJ86 | 231 | HDHD1A "Haloacid dehalogenase- | 0.857 | 0.861 | 0.369 | 1.7e-27 | |
| MGI|MGI:1914615 | 234 | Hdhd1a "haloacid dehalogenase- | 0.866 | 0.858 | 0.375 | 1.7e-27 | |
| FB|FBgn0019982 | 231 | Gs1l "GS1-like" [Drosophila me | 0.935 | 0.939 | 0.354 | 1.2e-26 | |
| UNIPROTKB|E1BRK1 | 214 | HDHD1 "Uncharacterized protein | 0.857 | 0.929 | 0.344 | 3.2e-26 | |
| RGD|1305101 | 234 | Hdhd1 "haloacid dehalogenase-l | 0.866 | 0.858 | 0.356 | 4e-26 |
| TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 152/226 (67%), Positives = 175/226 (77%)
Query: 1 MAQPLKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV+ + ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQD
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQD 228
|
|
| TAIR|locus:2174567 GS1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 83/210 (39%), Positives = 122/210 (58%)
Query: 27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
++EV + L ++ K++D K K++G+ +E A I VE+ G+ + +F+ E SM
Sbjct: 32 YTEVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSAEDFLVERESMLQ 91
Query: 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
D + +PGA+RLIKHL +P+ +A+ +H + K + +H E FS V+ G
Sbjct: 92 DLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLK-TQRH--RELFSLMHHVVRG 148
Query: 141 SD-EVRTGKPSPDIFLEAAKRLNMEPSSS---LVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
D EV+ GKP+PD FL AA+R P S LV ED+ GV+A K AGM VV VP
Sbjct: 149 DDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAAKNAGMNVVMVPDPRL 208
Query: 197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
AD++I SL+D +PE+WGLPPF+D
Sbjct: 209 DISHQDVADQIITSLVDFKPEEWGLPPFED 238
|
|
| UNIPROTKB|E2R8L4 HDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 78/203 (38%), Positives = 113/203 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +YGK++ K ++GK E A I+++ LP +K E V+E +
Sbjct: 30 LYSVVFQEICDRYGKKYSWDVKSLVMGKKATEAAQIVIDVLQLPMSKEELVDESQMKLKE 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
+PG +LI HL HGVP+A+A++S + E K S + F +++G D E
Sbjct: 90 LFPTAALMPGVEKLIHHLREHGVPLAVATSSSLLSFEMKTSRHKEFFSLFDHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PDIFL AKR + P LV ED+ GV A AAGM+VV VP Q H
Sbjct: 150 VKNGKPDPDIFLACAKRFSPPPPMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLQRHLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
+ A V++SL D +PE +GLPP+
Sbjct: 210 SKATVVLDSLQDFQPELFGLPPY 232
|
|
| TAIR|locus:2117512 GPP1 "glycerol-3-phosphatase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 79/210 (37%), Positives = 120/210 (57%)
Query: 27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
++EV + L +Y K +D K K++G+ +E A + V++ G+ + +F+ E SM
Sbjct: 89 YTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGISDSLSAEDFIVERESMLQ 148
Query: 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
D +PGA+RL++HL G+P+ +A+ +H + K + +H E FS V+ G
Sbjct: 149 DLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLK-TQRH--RELFSLMHHVVRG 205
Query: 141 SD-EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
D EV+ GKP+PD FL A++R ++P LV ED+ GV A K AGM V+ VP
Sbjct: 206 DDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAAKNAGMNVIMVPDSRL 265
Query: 197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
AD+V+ SLLD +PE+WGLP FQD
Sbjct: 266 DKSYCNVADQVLASLLDFKPEEWGLPSFQD 295
|
|
| UNIPROTKB|Q08623 HDHD1 "Pseudouridine-5'-monophosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/204 (39%), Positives = 114/204 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +Y K++ K ++GK LE A II++ LP +K E V E + +
Sbjct: 25 LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 84
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
+PGA +LI HL HG+P ALA++S A+ + K S + FS +++G D E
Sbjct: 85 VFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPE 144
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PDIFL AKR + P+ LV ED+ GV A AAGM+VV VP
Sbjct: 145 VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLT 204
Query: 202 TAADEVINSLLDLRPEKWGLPPFQ 225
T A V+NSL D +PE +GLP ++
Sbjct: 205 TKATLVLNSLQDFQPELFGLPSYE 228
|
|
| UNIPROTKB|Q2KJ86 HDHD1A "Haloacid dehalogenase-like hydrolase domain containing 1A" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 75/203 (36%), Positives = 113/203 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +YGK++ K ++GK LE A +I + LP + E V + +
Sbjct: 28 LYSAVFEDICGRYGKKYSWDVKSLVMGKKALEAAQLIRDTLQLPMSAEELVEVSQAKLKE 87
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
+PG +LI+HL H VP A+A++S A+ + K S +Q + V++G D E
Sbjct: 88 VFPTAALMPGVEKLIRHLRKHDVPCAVATSSGTASFQLKTSRHQDFFGLFHHVVLGDDPE 147
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
VR+GKP PDIFL A+R + P ++ LV ED+ GV A AAGM+VV VP +
Sbjct: 148 VRSGKPEPDIFLTCARRFSPAPPANKCLVFEDAPNGVEAALAAGMQVVMVPDGNLKPDLT 207
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
+ A V+ SL D +PE +GLPP+
Sbjct: 208 SKATLVLGSLQDFQPELFGLPPY 230
|
|
| MGI|MGI:1914615 Hdhd1a "haloacid dehalogenase-like hydrolase domain containing 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 77/205 (37%), Positives = 109/205 (53%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++++V + +YGK+++ K ++GK LE A IVE LP +K E + E
Sbjct: 30 LYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPISKEELLKESQEKLQM 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
L +PGA LI HL H +P ALA++S T ++K S G+ F +++G D E
Sbjct: 90 VLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP DIFL AKR + +P LV EDS GV A GM+VV VP
Sbjct: 150 VKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPFQD 226
A V++SL D +PE +GLP F +
Sbjct: 210 RKATLVLSSLHDFKPELFGLPAFTE 234
|
|
| FB|FBgn0019982 Gs1l "GS1-like" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 82/231 (35%), Positives = 122/231 (52%)
Query: 5 LKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
L+K+ CV +++ + L YGK + K +++G A +VE
Sbjct: 6 LRKVTHCVFDMDGLLLDTER-LYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
Y LP + E+ + + + + +PGA RL++HL + VP LA++S +E K
Sbjct: 65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
+ QH E FS+ + GS EV GKP+PDIFL AA R + +PS LV EDS
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTA-ADEVINSLLDLRPEKWGLPPFQD 226
GV A +AGM+VV VP P+ + T+ A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPD-PRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
|
|
| UNIPROTKB|E1BRK1 HDHD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 70/203 (34%), Positives = 110/203 (54%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
+++ V + ++GK + K ++GK LE A II + LP K E ++E
Sbjct: 11 LYTLVFEEICGRFGKSYTWDVKSLVMGKKALEGAQIIRDVLDLPITKEELLHESKMKQEK 70
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
+ +PG N+LI+HL H +P+A+A++S T + K S ++ +N +++G D E
Sbjct: 71 IFHTAELMPGVNKLIQHLHKHNIPIAVATSSAEVTFQMKTSRHKDFFNLFHHIVLGDDPE 130
Query: 144 VRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PD FL AKR + P LV EDS +GV AAGM+VV +P +
Sbjct: 131 VKGGKPQPDAFLVCAKRFHPPAPPEKCLVFEDSPLGVKGALAAGMQVVMIPDENLSPNLK 190
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
A ++NS+ D +PE +GLP +
Sbjct: 191 KEATLLLNSMEDFKPELFGLPAY 213
|
|
| RGD|1305101 Hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/205 (35%), Positives = 111/205 (54%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++++V + +YGK+++ K ++GK E IIV+ LP +K + + E
Sbjct: 30 LYTDVFQAICSRYGKKYNWDVKSLVMGKKAPETTQIIVDFLKLPISKEQLLEESQERLQK 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
L +PGA LI HL + +P ALA++S + ++K S G+ F +++G D E
Sbjct: 90 VLHTAALMPGAEELIHHLRKNRLPFALATSSATLSFQTKTSRYKGFFSLFHHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V KP+PDIFL AKR + P+ LV EDS GV A A GM+VV VP +
Sbjct: 150 VINSKPAPDIFLTCAKRFSPPPNPEDCLVFEDSPNGVEAAVACGMQVVMVPHENLSSDLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPFQD 226
T A V++SL + +PE +GLP F +
Sbjct: 210 TKATLVLSSLHEFKPELFGLPAFDE 234
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q08623 | HDHD1_HUMAN | 3, ., 1, ., 3, ., n, 6 | 0.3990 | 0.9224 | 0.9385 | yes | no |
| Q9D5U5 | HDHD1_MOUSE | 3, ., 1, ., 3, ., n, 6 | 0.3788 | 0.9612 | 0.9529 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 232 | |||
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 1e-141 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 1e-58 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 2e-40 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 1e-29 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 1e-26 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 1e-26 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 2e-25 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 4e-25 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 6e-20 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 4e-19 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-19 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 3e-17 | |
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 5e-17 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-16 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 4e-16 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 2e-15 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 2e-15 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 1e-14 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 1e-13 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 2e-13 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 1e-12 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 4e-12 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 1e-11 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 1e-11 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 5e-11 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 6e-11 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 9e-11 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 6e-10 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 2e-09 | |
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 2e-08 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 3e-07 | |
| TIGR00213 | 176 | TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate | 5e-06 | |
| TIGR01656 | 147 | TIGR01656, Histidinol-ppas, histidinol-phosphate p | 3e-05 | |
| TIGR01422 | 253 | TIGR01422, phosphonatase, phosphonoacetaldehyde hy | 3e-05 | |
| COG0241 | 181 | COG0241, HisB, Histidinol phosphatase and related | 1e-04 | |
| PRK13225 | 273 | PRK13225, PRK13225, phosphoglycolate phosphatase; | 2e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 3e-04 | |
| TIGR01458 | 257 | TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam | 3e-04 | |
| PRK08942 | 181 | PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p | 7e-04 | |
| PRK13478 | 267 | PRK13478, PRK13478, phosphonoacetaldehyde hydrolas | 0.001 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 0.001 | |
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 0.002 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 400 bits (1029), Expect = e-141
Identities = 172/226 (76%), Positives = 194/226 (85%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
A+PLKKL+S VILDLDGTLLNTDG+ S+VLK FLVKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 AAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDYGLPC+ EF +E+ + S+ C +KALPGANRLIKHL HGVPMALASNS RA
Sbjct: 63 TVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFSVIVG DEV GKPSPDIFLEAAKRLN+EPS+ LVIEDS+ GV+A
Sbjct: 123 IEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GKAAGMEV+AVPS+PKQTH Y++ADEVINSLLDL+PEKWGLPPF D
Sbjct: 183 GKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFND 228
|
Length = 382 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 184 bits (468), Expect = 1e-58
Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 17/223 (7%)
Query: 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKH 73
+DG LL+T+ ++EV + L +YGK +D K K++GK +E A I VE+ GL +
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPE 60
Query: 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133
+F+ E +M D +PGA RL++HL G+P+A+A+ SH+ + K +HG E
Sbjct: 61 DFLVEREAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQ-RHG--E 117
Query: 134 SFS----VIVGSD-EVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG 185
FS V+ G D EV+ GKP+PDIFL AA+R ++P LV ED+ GV A K AG
Sbjct: 118 LFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAG 177
Query: 186 MEVVAVP--SLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
M VV VP L K + AD+V++SLLD +PE+WGLPPF D
Sbjct: 178 MSVVMVPDPRLDKSYCK--GADQVLSSLLDFKPEEWGLPPFPD 218
|
Length = 220 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 2e-40
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDY-GLP 69
VI D+DGTL++++ + + L +YG E E ++ G ++ + G
Sbjct: 4 AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63
Query: 70 CAKHEFV-NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
A + +Y + L +K +PG L++ L G+P+A+AS+S R E ++ +
Sbjct: 64 PADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLAR 122
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIV +D+V GKP+PDI+L AA+RL ++P +V+EDS G+ A KAAGM V
Sbjct: 123 LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRPE 217
V VP+ + H +++L E
Sbjct: 183 VGVPAGHDRPHLDPLDAHGADTVLLDLAE 211
|
Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 1e-29
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI D+DG + +T + ++ K KYG +D + + G + + I++ G +
Sbjct: 4 VIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGDGLS 63
Query: 72 ---KH---EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
H E NE+Y L V LPG L+K L G+ + L S+S A I +K
Sbjct: 64 LEEIHQLAERKNELYRE-LLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRILAK 122
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ G + F IV + EV+ GKP P+ FL AA+ L + P+ +V ED++ GV A +AA
Sbjct: 123 L----GLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAA 178
Query: 185 GMEVVAV 191
GM VAV
Sbjct: 179 GMFAVAV 185
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 1e-26
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
++ DLDGTL+++ L + G E+ + + L+E + A
Sbjct: 7 ILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEA 66
Query: 72 KHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E V + F L + + PG L+ L G + + +N ++ +
Sbjct: 67 AAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKA 125
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIVG D+V KP P+ L ++L ++P +L++ DS+ ++A KAAG+
Sbjct: 126 LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPA 185
Query: 189 VAV------PSLPKQTHRYTAADEVINSLLDLRP 216
V V Q AD VI+SL +L
Sbjct: 186 VGVTWGYNSREELAQAG----ADVVIDSLAELLA 215
|
Length = 220 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-26
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + G +D + G + E I++ G +
Sbjct: 2 VIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGGKKYS 61
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
+ E N+ Y L LPG L+ L + + +ALAS S A TI K
Sbjct: 62 EEEKEELAERKNDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTILEK 121
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F IV E++ GKP P+IFL AA+ L + PS + IED+ G+ A KAA
Sbjct: 122 L----ELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAA 177
Query: 185 GMEVVAV 191
GM V V
Sbjct: 178 GMFAVGV 184
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 2e-25
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+I DLDGTL++ D + E L+ + G + E + G E A ++ ++ +
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 71 A-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
E + E P L++ L GV + + SN R +E +
Sbjct: 61 DEILEALLEYNLESRLEP-----FPDVVELLRRLKAKGVKLVILSNGSREAVERLLEK-L 114
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
G + F + SD+V KP P+ + +RL + P L I+DS + A +AAG++ V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
Query: 190 AV 191
V
Sbjct: 175 HV 176
|
Length = 176 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 4e-25
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG L++T + + + + E + YG
Sbjct: 1 AVLFDLDGVLVDT----AHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTM 56
Query: 71 AKHEFVNEVYSMFSDHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ + +F + L K +K LPG L++ L G +AL +NS RA + +
Sbjct: 57 SAEDAQLLYKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE-- 114
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F V++ S +V GKP PDI+L+A K+L ++PS L ++DS G+ A KAAGM
Sbjct: 115 LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHT 174
Query: 189 VAV 191
V V
Sbjct: 175 VLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 6e-20
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE---EAAIIVEDYGL 68
++ DLDGTLL+ D + + G E + LE +YGL
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 69 PCAK-----HEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + + + + L + P A +K L + + +N R
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELG-KKYKLGILTNGAR 125
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
E K+ Q G + F + S++V KP P+IF A ++L + P +L + DS+
Sbjct: 126 PHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLEND 184
Query: 179 VAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214
+ G +A GM+ V + K A D I+SL +L
Sbjct: 185 ILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222
|
Length = 229 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 4e-19
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 13 ILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK 72
I D+DGT+L+T+ + + L +YG ++D + + G A I+E
Sbjct: 9 IFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDP 68
Query: 73 HEFVNE----VYSMFSDHLCKVKALPGANRLIKHL-SCHG-VPMALASNSHRATIESKIS 126
H E V SM D V+ LP LI+ + + HG PMA+ + S A E+ +
Sbjct: 69 HALAREKTEAVKSMLLD---SVEPLP----LIEVVKAWHGRRPMAVGTGSESAIAEALL- 120
Query: 127 YQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
H G F +V +D+V+ KP+PD FL A+ + ++P+ +V ED+ G+ A +AAG
Sbjct: 121 -AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAG 179
Query: 186 MEVVAVPSL 194
M+ V V L
Sbjct: 180 MDAVDVRLL 188
|
Length = 188 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 5e-19
Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 24/194 (12%)
Query: 9 MSCVILDLDGTLLNTDG------MFSEVLKTFLVKY--------GKEWDGREKHKIVGKT 54
+ V+ DLDGTL + + E V KE +++ +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
E + V + + PGA +K L G+ +A+ +
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLIALTD---PLYPGAREALKELKEAGIKLAILT 117
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPSSSLVI 171
+R T + F +V +D GKP P IF A + L ++P L++
Sbjct: 118 GDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMV 173
Query: 172 EDSVIGVVAGKAAG 185
D V + A KAAG
Sbjct: 174 GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 3e-17
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
LPG + G+ + LAS S +E + + F + ++++ KP P
Sbjct: 93 LLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHP 151
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVIN 209
+++L A +L ++P + + +EDS G++A KAA M + VP+ P+Q + R+ AD +
Sbjct: 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLE 210
Query: 210 SLLDLRPE 217
SL +L
Sbjct: 211 SLTELTAA 218
|
Length = 222 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 5e-17
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTG 147
+ PG RL+ G+ +A+ S S+ + ++ G + V G D+V
Sbjct: 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG-DDVPKK 201
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
KP PDI+ AA+ L ++PS +V+EDSVIG+ A KAAGM + S ++ AD V
Sbjct: 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAV 261
Query: 208 INSLLDLRPEKWGL 221
+ L D+ E + L
Sbjct: 262 FDCLGDVPLEDFDL 275
|
Length = 286 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 4e-16
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 60/239 (25%)
Query: 12 VILDLDGTLLNT--------DGMFSEV---------LKTF-------LVKYGKEWDGREK 47
V DLDGTL+++ + + + ++T+ LV+ W GRE
Sbjct: 9 VAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGRE- 67
Query: 48 HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCH 106
+E L + F Y+ +++ L PG + L
Sbjct: 68 --------PDEEL-------LEKLRELFD-RHYA---ENVAGGSRLYPGVKETLAALKAA 108
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G P+A+ +N + + G + FSV++G D + KP P L A ++L ++P
Sbjct: 109 GYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167
Query: 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDLRPE 217
L + DS + A +AAG V V T+ Y D VI+ +L P
Sbjct: 168 EMLFVGDSRNDIQAARAAGCPSVGV------TYGYNYGEPIALSEPDVVIDHFAELLPL 220
|
Length = 226 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 4e-16
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 90 VKALPGANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGS 141
+ ALPGA L+ HL+ G+P A +AS H+A G V V +
Sbjct: 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GLPAP-EVFVTA 131
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
+ V+ GKP PD +L A+ L + P +V+ED+ GV++G AAG V+AV + P T R
Sbjct: 132 ERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPADTPRL 190
Query: 202 TAADEVINSLLDLRPEK 218
D V++SL L K
Sbjct: 191 DEVDLVLHSLEQLTVTK 207
|
Length = 218 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 2e-15
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---- 144
+++ PG +K L G+ +ALA+N R + + + G ++ F ++ S+
Sbjct: 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYY 80
Query: 145 ------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
GKP+PD L A K L ++P L++ DS+ + KAAG VAV
Sbjct: 81 PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 2e-15
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
PGA LI G+ +A+AS++ R +++ ++ F IV +D KP+PDI
Sbjct: 164 PGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI 223
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
FL AAK L + S +VIED++ GV A +AAGM +AV
Sbjct: 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261
|
Length = 1057 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 1e-14
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 32/192 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------IV 63
V+ DLDG L+++ F+ + + F + Y +E G G P EE I+
Sbjct: 1 VVFDLDGVLVDS---FAVMREAFAIAY-REVVGD------GPAPFEEYRRHLGRYFPDIM 50
Query: 64 EDYGLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH----R 118
GLP E FV E Y + +V+ PG L+ L GV A+A+ R
Sbjct: 51 RIMGLPLEMEEPFVRESYRLAG----EVEVFPGVPELLAELRADGVGTAIATGKSGPRAR 106
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +E+ G F ++GSDEV KP+PDI EA + L++ P ++++ D+V +
Sbjct: 107 SLLEAL-----GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDL 161
Query: 179 VAGKAAGMEVVA 190
+ +AAG VA
Sbjct: 162 ASARAAGTATVA 173
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 1e-13
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
PG + L G+ + L +N + G + FSV++G D + KP
Sbjct: 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPH 143
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
PD L AA+RL + P + + DS + + A +AAG V +
Sbjct: 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLL 184
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 2e-13
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 9 MSCVILDLDGTLLNTDGM----FSEVLKTFLVKYGKEWDGREK---HKIVGKTPLEEAAI 61
+ V+ D+DGTL ++D + F E+L+ G E+ I GK + A
Sbjct: 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPIT--EEFFVENIAGKHNEDIALG 79
Query: 62 IVED---YGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSH 117
+ D GL +F ++ ++F ++K L G +L K + G+ A +N+
Sbjct: 80 LFPDDLERGL-----KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAP 134
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E IS G ++ F ++ E KP PD +L+A + L + + V EDSV G
Sbjct: 135 RENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSG 193
Query: 178 VVAGKAAGMEVVAV 191
+ AG AAGM VV +
Sbjct: 194 IKAGVAAGMPVVGL 207
|
Length = 248 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 1e-12
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154
G+ + L + +PMAL S R T+E+ I G FSVIV +++V GKP P++F
Sbjct: 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMF 278
Query: 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ AA+ LN P +V +S V A A M+ VAV S + AAD V+ L +L
Sbjct: 279 IYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337
|
Length = 381 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 4e-12
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ PG+ ++ L H +P+A+AS R +E I G FSV++ +++V GKP
Sbjct: 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPD 167
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
P++F+ AA+RL P +V +S V A M+ VAV + +A D V+
Sbjct: 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRR 226
Query: 211 LLDL 214
L DL
Sbjct: 227 LDDL 230
|
Length = 260 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-11
Identities = 47/225 (20%), Positives = 88/225 (39%), Gaps = 31/225 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKT---FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
+ DLD TL++T G+ + + L++ G D E ++ + K ++++YG
Sbjct: 5 IFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLK--------LIKEYGS 56
Query: 69 PCAKH---------------EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
H VY+ ++ PG + L G + +
Sbjct: 57 NYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGII 116
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
++ K+ + G + F ++ S+E KP P IF A KRL ++P ++++ D
Sbjct: 117 TDGLPVKQWEKLE-RLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGD 175
Query: 174 SVI-GVVAGKAAGMEVVAVPSLPKQTHR---YTAADEVINSLLDL 214
+ + K GM+ V + Y D I+SL +L
Sbjct: 176 RLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-11
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 203
GKP+P + A +RL ++P ++I DS ++A +AAG+ + V T TA
Sbjct: 3 GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57
Query: 204 ------ADEVINSLLDL 214
D V++SL DL
Sbjct: 58 ERAPGRPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 5e-11
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK--TPLEEAAIIVEDYGLP 69
++ D+DGTL++ E+ + L+ + E+
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTF----------EEFGLNPAAFKRLKALRGLAEE---- 47
Query: 70 CAKHEFVNEVYSMFSDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
E H+ + +PGA L+ L G+ + + SN + +
Sbjct: 48 -LLWRIATEALEELQGHIGYDAEEAYIPGAADLLPRLKEAGIKLGIISNGSLRAQKLLLR 106
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
HG + F +I+GSDE+ + KP P+IFL A + L + P L + D++ + + AG
Sbjct: 107 K-HGLGDYFELILGSDEIGS-KPEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 6e-11
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE-AAIIVEDYGLP 69
V D DGTL++++ + S T ++G E K L E II +++G+
Sbjct: 6 AVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVT 65
Query: 70 CAKHE----FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
AK E + EV +F L + + GAN L++ ++ VPM + SN SK+
Sbjct: 66 LAKAELEPVYRAEVARLFDSEL---EPIAGANALLESIT---VPMCVVSNGP----VSKM 115
Query: 126 SYQHGWNESFS-----VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+ G + G D ++ KP P + AA+ +N+ + ++++DS G +
Sbjct: 116 QHSLGKTGMLHYFPDKLFSGYD-IQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQS 174
Query: 181 GKAAGMEV 188
G AAGMEV
Sbjct: 175 GIAAGMEV 182
|
Length = 221 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 9e-11
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK---TPLEEA-AIIVEDYG 67
V+ DLDGTL+NT+ + ++ +FL + + K + V L + + I E
Sbjct: 6 VLFDLDGTLINTNEL---IISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESK- 61
Query: 68 LPCAKHEFVNEVYSMFSD-----HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
V E+ + + + H V +K L G + + + R T+E
Sbjct: 62 --------VEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVE 113
Query: 123 S--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
K++ G +E F V++ D+V KP P+ L+A + L +P +L++ D+ ++A
Sbjct: 114 MGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILA 170
Query: 181 GKAAGMEVVAV 191
GK AG + V
Sbjct: 171 GKNAGTKTAGV 181
|
Length = 214 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 6e-10
Identities = 66/242 (27%), Positives = 93/242 (38%), Gaps = 57/242 (23%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK------------------- 47
+L V+ DLDGTL+++ + + L++ G+ G E
Sbjct: 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAG 70
Query: 48 ---HKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL 103
H V E+A A+ +E Y HE VY PG +K L
Sbjct: 71 SIDHDGVDDELAEQALALFMEAYA---DSHEL-TVVY-------------PGVRDTLKWL 113
Query: 104 SCHGVPMALASNSHRATI-----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158
GV MAL +N + + KI W I+G D + KP P L
Sbjct: 114 KKQGVEMALITNKPERFVAPLLDQMKIGRYFRW------IIGGDTLPQKKPDPAALLFVM 167
Query: 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE----VINSLLDL 214
K + PS SL + DS V+A KAAG++ VA+ H A+E VI+ L L
Sbjct: 168 KMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY--GYNHGRPIAEESPALVIDDLRAL 225
Query: 215 RP 216
P
Sbjct: 226 LP 227
|
Length = 272 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 2e-09
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG---------KEWDGREKHKIV------GKT 54
S V+LD+ GT ++ DG+ L+ + G W G+ K + +
Sbjct: 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADGA 61
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
EA D+ E + D ALPGA + L G+ +AL +
Sbjct: 62 DEAEAQAAFADF----------EERLAEAYDDG-PPVALPGAEEAFRSLRSSGIKVALTT 110
Query: 115 NSHRATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVI 171
R T E ++ + GW + +V +V G+P+PD+ L A + ++ S V
Sbjct: 111 GFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVA 169
Query: 172 EDSVIGVVAGKAAGMEVVA 190
D+ + AG AG V
Sbjct: 170 GDTPNDLEAGINAGAGAVV 188
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKI 125
P + + E+YS F+ + P A +L+K L G+ + + SN R +E+
Sbjct: 84 PESFEKIFEELYSYFATPEP-WQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEAL- 141
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAA 184
G E F +V S EV KP P IF EA +R + P +L I DS+ +AA
Sbjct: 142 ----GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAA 197
Query: 185 GM 186
G
Sbjct: 198 GW 199
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
Q GW + +V++G D + KP P L AA+R+ + P+ + + D ++A +AAGM
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190
Query: 188 VVAV 191
VA
Sbjct: 191 SVAA 194
|
Length = 229 |
| >gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 205
KP P + L+A K L+++ + S ++ D + + AG AA V+ P AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 166 WVLNSLADL 174
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176 |
| >gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 3e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193
KP P + LEA KRL ++ S SLV+ D + + A + AG+ V +
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146
|
This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147 |
| >gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-05
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNESFSVIVGSDEVRTGKPSP 151
PGA +I +L G+ + + R ++ + + G+ + V +D+V G+P+P
Sbjct: 102 PGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDY--NVTADDVPAGRPAP 159
Query: 152 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+ L+ A L + +++V + D+V + G+ AGM V V
Sbjct: 160 WMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200
|
This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253 |
| >gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 206
KP P + L A K N++ S S V+ D + + A + AG++ V+ + + T A
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164
Query: 207 VINSLLDL 214
V +SL +
Sbjct: 165 VFDSLAEF 172
|
Length = 181 |
| >gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (95), Expect = 2e-04
Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 30/201 (14%)
Query: 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------------KEWDGREKHKI 50
Q + + +I D DGTL+++ + +G ++W R +
Sbjct: 56 QSYPQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRR 115
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
G +P ++A ++ V D L ++ PG L+ L + +
Sbjct: 116 AGLSPWQQARLL--------------QRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCL 161
Query: 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+ S++ R IE+ + Q G FSV+ + + + + + R +P++ +
Sbjct: 162 GILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRA---LSQLVAREGWQPAAVMY 217
Query: 171 IEDSVIGVVAGKAAGMEVVAV 191
+ D V A + G+ VAV
Sbjct: 218 VGDETRDVEAARQVGLIAVAV 238
|
Length = 273 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 191
GKPSP I+ A ++L ++ S L++ D + ++ KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234
|
Length = 269 |
| >gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 3e-04
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 205
GKPS FLEA + EP +++I D V G + GM + V +T +Y +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232
Query: 206 E 206
E
Sbjct: 233 E 233
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257 |
| >gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 7e-04
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
KP P + L A+RLN++ + S ++ DS+ + A AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140
|
Length = 181 |
| >gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.001
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+V +D+V G+P P + L+ A L + ++ V ++D+V G+ G AGM V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202
|
Length = 267 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.001
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE----------------WDGREKHKIVGKT- 54
++ DLD T+L+ + L+ G W E+ KI
Sbjct: 4 LLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEV 63
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALA 113
+ ++++Y A +N+ Y F + ++ LPGA L+++L + +
Sbjct: 64 VNTRFSALLKEYNTE-ADEALLNQKYLRFLEEGHQL--LPGAFELMENL--QQKFRLYIV 118
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
+N R T ++ + G F I S++ KP +IF A +R+ L+I
Sbjct: 119 TNGVRETQYKRLR-KSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIG 177
Query: 173 DSVIG-VVAGKAAGMEVV 189
DS+ + G+ AG++
Sbjct: 178 DSLTADIKGGQNAGLDTC 195
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KPSP + +A + ++P ++ +DS + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| PLN02940 | 382 | riboflavin kinase | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 100.0 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 100.0 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 100.0 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 100.0 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 100.0 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 100.0 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 100.0 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 100.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 100.0 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 100.0 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 100.0 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.98 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.98 | |
| PLN02811 | 220 | hydrolase | 99.97 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.97 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.97 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.97 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.97 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.97 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.96 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.96 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.96 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.95 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.95 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.95 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.95 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.95 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.94 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.94 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.93 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.93 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.92 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.92 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.91 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.9 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.9 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.9 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.9 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.88 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.87 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.87 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.87 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.86 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.86 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.86 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.84 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.83 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.83 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.83 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.82 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.82 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.81 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.79 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.78 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.77 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.77 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.77 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.77 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.76 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.75 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.75 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.74 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.74 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.73 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.72 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.68 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.68 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.68 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.65 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.65 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.64 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.64 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.62 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.62 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.6 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.6 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.59 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.59 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.59 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.59 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.58 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.58 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.57 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.57 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.56 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.56 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.55 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.53 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.53 | |
| PLN02887 | 580 | hydrolase family protein | 99.52 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.52 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.51 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.5 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.5 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.49 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.49 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.47 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.43 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.41 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.4 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.4 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.39 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.37 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.36 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.34 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.33 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.32 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.29 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.28 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.26 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.25 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.23 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.23 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.22 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.22 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 99.21 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.16 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.11 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.11 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 99.11 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.1 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 99.07 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.05 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.05 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.96 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.95 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.95 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.93 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.92 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.92 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.9 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.85 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.81 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.81 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.77 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.76 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.74 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.7 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.64 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.61 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.61 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.61 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.59 | |
| PLN02423 | 245 | phosphomannomutase | 98.59 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.56 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.56 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.56 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 98.55 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.55 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.48 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.48 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.46 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 98.41 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.4 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.39 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.39 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.38 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.38 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 98.36 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 98.3 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 98.29 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.24 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 98.2 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 98.12 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.09 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.06 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.05 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 98.04 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.04 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.94 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.88 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.73 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.7 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 97.65 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.64 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.53 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.47 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.41 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 97.26 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 97.23 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 97.2 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.13 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 97.06 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.06 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.04 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 96.99 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.98 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 96.82 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 96.79 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 96.63 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.48 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 96.42 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.31 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.14 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 96.09 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 95.97 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.92 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 95.91 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.83 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 95.72 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.69 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 95.33 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.27 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 95.22 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 95.18 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.12 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 94.93 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 94.92 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.9 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 94.52 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 94.35 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 94.32 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 93.74 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 91.99 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 91.86 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 91.73 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.71 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.57 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 91.14 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 91.03 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 90.98 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 90.83 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 90.25 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 90.09 | |
| PLN03017 | 366 | trehalose-phosphatase | 90.09 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 90.08 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 90.07 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 89.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 89.83 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 89.72 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 89.46 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 89.41 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 89.15 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 89.01 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 88.91 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 88.43 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 88.31 | |
| PLN02151 | 354 | trehalose-phosphatase | 88.29 | |
| PRK00994 | 277 | F420-dependent methylenetetrahydromethanopterin de | 88.26 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 88.17 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 88.08 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 88.06 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 87.92 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 87.9 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 87.71 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 87.42 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 86.71 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 86.32 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 86.12 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 85.38 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 84.67 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 84.44 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 84.1 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 83.44 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 82.95 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 82.71 | |
| PF06014 | 62 | DUF910: Bacterial protein of unknown function (DUF | 82.6 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 81.86 | |
| TIGR00190 | 423 | thiC thiamine biosynthesis protein ThiC. The thiC | 81.64 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 81.51 | |
| PRK13352 | 431 | thiamine biosynthesis protein ThiC; Provisional | 81.48 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 81.36 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 80.4 |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=235.75 Aligned_cols=222 Identities=76% Similarity=1.203 Sum_probs=195.7
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
..+++|+||+||||+|+...+..++..+++++|...+.+......+.+....+..+++.++.....+++...+.+.+.+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQ 88 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999988777777788888888888888888887766666666666666665
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
+....++||+.++|+.|+++|++++|+||.....+...+.++.++..+|+.+++++++...||+|+.|..++++++++|+
T Consensus 89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 89 WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 66778999999999999999999999999999988888833789999999999999999999999999999999999999
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCCCCCCCCC
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDCK 228 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~~~~~~~~ 228 (232)
+|++|||+.+|+.+|+++|+.++++.++.........+++++.+++|+...-.++|.|++|+
T Consensus 169 ~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~ 230 (382)
T PLN02940 169 NCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWI 230 (382)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccc
Confidence 99999999999999999999999999865444445678999999999998888899999876
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=213.56 Aligned_cols=210 Identities=21% Similarity=0.375 Sum_probs=171.4
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCc-chhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (232)
.++++|+||+||||+|+...+..++..++.+++...+. ..+....+.........+....+.. .........+.+.+.
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVI 84 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999987655 4455666766555555554444322 223344444444443
Q ss_pred hh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 85 ~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
+. .....++||+.++|+.|+++|++++|+||+....+...+ +++++..+|+.+++++..+.+||+|+.++.+++++|+
T Consensus 85 ~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 163 (222)
T PRK10826 85 SLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGV 163 (222)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCC
Confidence 33 345789999999999999999999999999999999888 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-cchhhhHhhhhccCcCcc
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLRPE 217 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~l~el~~~ 217 (232)
+|++|++|||+.+|+.+|+++|++++++..+....+ ....++.++.++.|+...
T Consensus 164 ~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~ 218 (222)
T PRK10826 164 DPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAA 218 (222)
T ss_pred CHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhh
Confidence 999999999999999999999999999998654432 245689999999998553
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=213.81 Aligned_cols=211 Identities=25% Similarity=0.396 Sum_probs=178.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
+++++|+||+||||+|+...+..++..++++++.. .+.+.+....+......+............. +....+.+.+..
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 57899999999999999999999999999999988 6777888888888877766665443333211 344444444443
Q ss_pred hhcc---CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 86 HLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 86 ~~~~---~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.+.. ..++||+.++|.+|++.|++++|+||.+...+...+ +++|+..+|+.+++.+.....||+|..+..+++.++
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 3322 579999999999999999999999999999999999 889999999999998888999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC-cc-ccchhhhHhhhhccCcCcccc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QT-HRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~-~~-~~~~~~~~~~~~l~el~~~l~ 219 (232)
++|++++||||+.+|+.+|+++|+.+++|.+|+. .. .....++++++++.|+...+.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 9988999999999999999999999999999864 22 226779999999999987664
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=213.01 Aligned_cols=208 Identities=24% Similarity=0.364 Sum_probs=171.6
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhh-hcCCChHHHHHHHHHHcCCCc-cHHhHHHHHHHHHHhh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDH 86 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (232)
+|+|+||+||||+|+...+..++..++++++.+.+...... ..+......+..++...+.+. ...++...+.+.+.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA 80 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999998776666655 677777777777777666431 1222334444444433
Q ss_pred hc--cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc--cccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 87 ~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+. ..+++||+.++|++|+++|++++|+||+....+...+ +++++. .+|+.++++++....||+|..+..++++++
T Consensus 81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 32 4589999999999999999999999999999999999 888998 999999999999899999999999999999
Q ss_pred CC-CCcEEEEeCchhhhhhhhhcCCEE-EEeCCCCCcccc--chhhhHhhhhccCcCcc
Q 026853 163 ME-PSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (232)
Q Consensus 163 ~~-~~~~~~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~--~~~~~~~~~~l~el~~~ 217 (232)
+. |+++++|||+.+|+.+|+++|+.+ +++..|...... ...+++++++++|+...
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 97 799999999999999999999999 899876544332 35688888999887654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=210.76 Aligned_cols=205 Identities=22% Similarity=0.297 Sum_probs=168.2
Q ss_pred EEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccH---HhHHHHHHHHHHhhh
Q 026853 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAK---HEFVNEVYSMFSDHL 87 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 87 (232)
|+||+||||+|+...+..++..++++++.. .+.+.+....+......+..++..++..... .++.+.+.+.+.+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA 80 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence 689999999999888889999999999885 4555666667777666667766666544332 223333444443332
Q ss_pred -ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 88 -CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 88 -~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
....++||+.++|+.|+++|++++|+||+....+...+ +++++..+|+.++++++....||+|+.|..+++++|++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 24679999999999999999999999999999899888 8899999999999999988999999999999999999999
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCcc
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~ 217 (232)
++++|||+.+|+.+|+++|+.++++.+|...... ...++++++++.|+..+
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999999999999999999999886543322 35788999999988654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=211.85 Aligned_cols=205 Identities=23% Similarity=0.341 Sum_probs=166.3
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
++++|+||+||||+|+...+..++..++++++.. .+.+.+....|.+....+..+ . ....+.+...+...+...
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 76 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKI----D-ESKVEEMITTYREFNHEH 76 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhc----C-HHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999998753 455566677777655544332 1 112233333333333322
Q ss_pred -hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.....++||+.++|+.|+++|++++|+||.....+...+ +.+|+..+|+.++++++....||+|..+.++++++++++
T Consensus 77 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 155 (214)
T PRK13288 77 HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP 155 (214)
T ss_pred hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence 235679999999999999999999999999999999899 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l 218 (232)
+++++|||+.+|+.+|+++|+.++++.++...... ...++++++++.|+.+.+
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 99999999999999999999999999986543322 346889999999987754
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=214.03 Aligned_cols=205 Identities=26% Similarity=0.350 Sum_probs=162.7
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCC----CCCcchh-hhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
.++++|+||+||||+|+...+..++..++++++. +.+.+.+ ....|.+....+..++.. ... ...++...+..
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 97 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKEA 97 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHHH
Confidence 4689999999999999999999999999999864 3333332 345666655554443321 111 11122223333
Q ss_pred HHHhhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHh
Q 026853 82 MFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
.+.+.. ....++||+.++|++|+++|++++|+||.....+...+ +++++..+|+.++++++....||+|+.|..++++
T Consensus 98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~ 176 (248)
T PLN02770 98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV 176 (248)
T ss_pred HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence 333332 35789999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhhhhccCc
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL 214 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~~l~el 214 (232)
++++|+++++|||+.+|+.+|+++|+.++++.+++..... ...++++++++.|+
T Consensus 177 ~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 177 LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 9999999999999999999999999999999986543333 45789999999983
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=212.33 Aligned_cols=211 Identities=21% Similarity=0.345 Sum_probs=166.6
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
..|+|+|+||+||||+|+...+..++..+++++|.+ .+.+.+....+.+............. ....+++...+.+.+.
T Consensus 9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 87 (229)
T PRK13226 9 VRFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYE 87 (229)
T ss_pred cccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999975 34445555555554443333222111 1112334444554444
Q ss_pred hhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 85 ~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
... ....++||+.++|+.|++.|++++++||+........+ +++++..+|+.+++++.....||+|+.+.++++++|+
T Consensus 88 ~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~ 166 (229)
T PRK13226 88 ALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGV 166 (229)
T ss_pred HhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCC
Confidence 432 35689999999999999999999999999988888788 8899999999999888888899999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc-cc--chhhhHhhhhccCcCccc
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~~--~~~~~~~~~~l~el~~~l 218 (232)
+|+++++|||+.+|+.+|+++|+.++++.+|.... .. ...+++++++++|+...+
T Consensus 167 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 167 APTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred ChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 99999999999999999999999999998876422 22 356899999999986654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=212.71 Aligned_cols=209 Identities=22% Similarity=0.306 Sum_probs=165.5
Q ss_pred cccEEEEeCCCcccccH-HHHHHHHHHHHHHcCCCCCcchh-hhhcCCChHHHHHHHHHHcCCCc-cHHhHHHHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (232)
.+|+|+||+||||+|+. ..+..++..+++++|........ ....|.+....+..++.. .... ....+...+...+.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~~ 101 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCW-SRDFLQMKRLAIRKEDLYE 101 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhcc-CCCHHHHHHHHHHHHHHHH
Confidence 57999999999999995 56677999999999987655544 567787776666555431 1111 11222333333332
Q ss_pred hhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 85 ~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
... ....++||+.++|+.|+++|++++|+||.....+...+ +++|+..+|+.++++++....||+|+.|..+++++|+
T Consensus 102 ~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~ 180 (260)
T PLN03243 102 YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGF 180 (260)
T ss_pred HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCC
Confidence 221 24678999999999999999999999999999999888 9899999999999999999999999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
++++|++|||+.+|+.+|+++|+.++++.+ .........+++++++++|+....+
T Consensus 181 ~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g-~~~~~~l~~ad~vi~~~~el~~~~~ 235 (260)
T PLN03243 181 IPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDLSVVDL 235 (260)
T ss_pred ChHHeEEEcCCHHHHHHHHHcCCEEEEEec-CCchhhhccCCEEeCCHHHHHHHHH
Confidence 999999999999999999999999999974 3333334467888899988876655
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=213.60 Aligned_cols=209 Identities=17% Similarity=0.236 Sum_probs=163.7
Q ss_pred ccEEEEeCCCcccccHH-HHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHH----------HHHHHcCCCccHHh---
Q 026853 9 MSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA----------IIVEDYGLPCAKHE--- 74 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--- 74 (232)
+++|+||+||||+|+.. .+..++.++++++|...+.+.+....|.+....+. .+.+.++.....+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEA 81 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHH
Confidence 68999999999999854 34678888999999876666666666665443322 23344454332222
Q ss_pred HHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCCCCCHH
Q 026853 75 FVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPD 152 (232)
Q Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~~~ 152 (232)
+...+...+.+. .....++||+.++|+.|+++|++++|+||.....+...+ +++|+..+| +.++++++....||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~ 160 (253)
T TIGR01422 82 IYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPW 160 (253)
T ss_pred HHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHH
Confidence 223333333222 245789999999999999999999999999999999888 888999986 89999999999999999
Q ss_pred HHHHHHHhcCCC-CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc------------------------ccc-chhhhH
Q 026853 153 IFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAADE 206 (232)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~-~~~~~~ 206 (232)
.|..+++++|+. |+++++|||+.+|+.+|+++|+.+|+|.+|... ... ..+|++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHY 240 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999999995 999999999999999999999999999987642 122 457899
Q ss_pred hhhhccCcCccc
Q 026853 207 VINSLLDLRPEK 218 (232)
Q Consensus 207 ~~~~l~el~~~l 218 (232)
+++++.|+.+.+
T Consensus 241 v~~~~~el~~~~ 252 (253)
T TIGR01422 241 VIDTLAELPAVI 252 (253)
T ss_pred ehhcHHHHHHhh
Confidence 999999986553
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=206.60 Aligned_cols=208 Identities=23% Similarity=0.344 Sum_probs=170.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcch-hhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
++++|+||+||||+|+...+.+++.++++++|...+.+. .....+.+....+..+...++.....+++...+...+...
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARL 82 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 589999999999999998888999999999998766544 3455667777888888888877655555555555444332
Q ss_pred -hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc-eeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.....++||+.++|+.|+ ++++|+||+....+...+ +++++..+|+ .++++++.+..||+|+.|..+++++|++
T Consensus 83 ~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~ 158 (221)
T PRK10563 83 FDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN 158 (221)
T ss_pred HHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence 245789999999999983 899999999998888888 8899999996 6777878889999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
|++|++|||+.+|+.+|+++|++++++..+.........++.++.++.|+.+.+.
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWK 213 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997643333334566778899999887654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=216.19 Aligned_cols=207 Identities=25% Similarity=0.288 Sum_probs=168.4
Q ss_pred cccEEEEeCCCcccccHH-HHHHHHHHHHHHcCCCCCcch-hhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
..++|+||+||||+|+.. .+..++..+++++|....... .....|.+....+..++.........+++...+.+.+.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 579999999999999976 555688889999998765554 467788888777766654322111223344444444443
Q ss_pred hh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 86 ~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.. ....++||+.++|+.|+++|++++|+||.....+...+ +++|+..+|+.++++++....||+|+.|..+++++|+.
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~ 288 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI 288 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC
Confidence 33 34678999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~ 216 (232)
|++|++|||+..|+++|+++|+.+|+|.+++...+ ...++++++++.||..
T Consensus 289 Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~-l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 289 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYE-LGAADLVVRRLDELSI 339 (381)
T ss_pred cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhH-hcCCCEEECCHHHHHH
Confidence 99999999999999999999999999987543332 3458888999999844
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=214.61 Aligned_cols=213 Identities=18% Similarity=0.240 Sum_probs=165.0
Q ss_pred ccccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHH----------HHHcCCCccHH--
Q 026853 7 KLMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKH-- 73 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-- 73 (232)
+++|+|+||+||||+|+... +..++.++++++|.+.+.+......|......+..+ ...++......
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADV 81 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHH
Confidence 46899999999999998543 367888999999987666666666666554433322 23344432222
Q ss_pred -hHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCCCCC
Q 026853 74 -EFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS 150 (232)
Q Consensus 74 -~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~ 150 (232)
++...+...+.+. .....++||+.++|+.|+++|++++|+||.....+...+ +.+++..+| +.++++++....||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP~ 160 (267)
T PRK13478 82 DALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRPY 160 (267)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCCC
Confidence 2233333333322 235689999999999999999999999999999888888 777887774 888999998899999
Q ss_pred HHHHHHHHHhcCCC-CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc------------------------ccc-chhh
Q 026853 151 PDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAA 204 (232)
Q Consensus 151 ~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~-~~~~ 204 (232)
|..|..+++++|+. ++++++|||+.+|+.+|+++|+.+|+|.+|... ... ...+
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999996 699999999999999999999999999987642 122 4578
Q ss_pred hHhhhhccCcCccccC
Q 026853 205 DEVINSLLDLRPEKWG 220 (232)
Q Consensus 205 ~~~~~~l~el~~~l~~ 220 (232)
+++++++.|+.+.+..
T Consensus 241 ~~vi~~~~~l~~~l~~ 256 (267)
T PRK13478 241 HYVIDTIADLPAVIAD 256 (267)
T ss_pred CeehhhHHHHHHHHHH
Confidence 9999999999877643
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=205.72 Aligned_cols=202 Identities=27% Similarity=0.403 Sum_probs=157.0
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHH--HH-
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FS- 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 84 (232)
++|+|+||+||||+|+...+..++..+++++|.+. .+......|.+....++.+... ...+.+...+... +.
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAG----ASEAEIQAEFTRLEQIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhcc----CCcHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999754 2223333466655554444321 1223333333221 11
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.......++||+.++|+.|+++|++++++||+........+ +..++ .+++.++++++....||+|..|..+++++|+.
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~ 154 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA 154 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC
Confidence 12345689999999999999999999999999887777677 77777 45788888888888999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~ 217 (232)
|+++++|||+.+|+.+|+++|+.++++.++.... ....+++++++++|+...
T Consensus 155 p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~~~~~el~~~ 206 (218)
T PRK11587 155 PQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP-RLDEVDLVLHSLEQLTVT 206 (218)
T ss_pred cccEEEEecchhhhHHHHHCCCEEEEECCCCchh-hhccCCEEecchhheeEE
Confidence 9999999999999999999999999998865332 345688999999998644
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=204.63 Aligned_cols=209 Identities=33% Similarity=0.488 Sum_probs=173.6
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCc--cHHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 85 (232)
++++++||+||||+|+...+..+|.++++++|+..+.+......+.........+.+...... +..............
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999988888878888777777777777665432 222333333333334
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
......+.||+.++|++|+++|+++++.|++.+..+.+.+ ...|+.++|+.+++++++..+||+|..|..+++++|+.|
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 4467899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc----cccchhhhHhhhhccCcCcc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----THRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~----~~~~~~~~~~~~~l~el~~~ 217 (232)
++|++|+|+.+.+.+++++||.++++..++.. ......++....++.++...
T Consensus 160 ~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 215 (221)
T COG0637 160 EECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPAL 215 (221)
T ss_pred HHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHH
Confidence 99999999999999999999999999985443 22245555666666655433
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=203.47 Aligned_cols=212 Identities=22% Similarity=0.295 Sum_probs=170.8
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC-CcchhhhhcCCChHHHHHHHHHHcCCCccHHh---HHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSM 82 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 82 (232)
+++++|+||+||||+++...+..++..++++++.+. +...+....+......+...+...+.....++ ....+.+.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRH 83 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence 568999999999999998888889999999998753 45556666777666666666554433332222 22333333
Q ss_pred HHhhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhc
Q 026853 83 FSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 161 (232)
+.... ....++||+.++++.|++.|++++++||+........+ +++++..+|+.+++++.....||+|.+++.+++++
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 33322 24679999999999999999999999999999888888 88999999999999998889999999999999999
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCcccc
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~ 219 (232)
+++++++++|||+.+|+++|+++|+.++++.+|...... ...+++++++++|+...+.
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~ 222 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLG 222 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHH
Confidence 999999999999999999999999999999986543222 4578899999999877654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=209.40 Aligned_cols=212 Identities=25% Similarity=0.298 Sum_probs=168.1
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHH----cCCC-ccHHhHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVED----YGLP-CAKHEFVNEVY 80 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~ 80 (232)
.++|+|+||+||||+|+...+..++..++++++.... .+.+....+.+.......++.. .+.+ ...++....+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998653 3445566666655544444321 1222 11222333333
Q ss_pred HHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHh
Q 026853 81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
+.+........++||+.++|+.|++.|++++++||.+...+...+ +++++..+|+.+++++.....||+|..++.++++
T Consensus 91 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 333333334678999999999999999999999999998888888 8889999999999999888899999999999999
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCcccc
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~ 219 (232)
+|+.++++++|||+.+|+.+|+++|+.+++|..|...... ...++++++++.||...+.
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 9999999999999999999999999999999987544333 4579999999999986543
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=206.08 Aligned_cols=207 Identities=21% Similarity=0.311 Sum_probs=150.4
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHH---HHHcCCCCCcchhhhhcC-------CChHHHHHHHHHHcCCCccHHhHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGREKHKIVG-------KTPLEEAAIIVEDYGLPCAKHEFVN 77 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (232)
|+++|+||+||||+++...+..++..+ +.+++.+.+.+.+..... ..............+.....+....
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAA 80 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHH
Confidence 378999999999999977766665544 455666555443322111 1000011111222222111222222
Q ss_pred HHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH
Q 026853 78 EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~ 157 (232)
..............++||+.++|+.|+++|++++++||+....+...+ +++|+..+|+.++++++.+..||+|..|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 81 FVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAA 159 (221)
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHH
Confidence 222333333345689999999999999999999999999988888888 8899999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcc---ccchhhhHhhhhccCcC
Q 026853 158 AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLDLR 215 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~---~~~~~~~~~~~~l~el~ 215 (232)
++++|++++++++|||+. +|+.+|+++|+.++++..+.... .....++++++++.|++
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLRELL 221 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhhC
Confidence 999999999999999998 89999999999999999865433 12345788888888763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=194.81 Aligned_cols=183 Identities=28% Similarity=0.458 Sum_probs=156.0
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
.++++|+||+||||+|+...+..++..+++++|...+........|.+....+..++..++.....+++...+...+...
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKSM 82 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999987666667777888877777777777766555555555444444333
Q ss_pred -hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.....++|+ .++|..|++. ++++|+||+....+...+ +++++..+|+.++++++....||+|+.|..++++++++|
T Consensus 83 ~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 159 (188)
T PRK10725 83 LLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP 159 (188)
T ss_pred HhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCH
Confidence 345567886 5899999876 899999999999999899 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeC
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~ 192 (232)
+++++|||+.+|+++|+++|+++|+|.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999885
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=199.32 Aligned_cols=200 Identities=24% Similarity=0.316 Sum_probs=159.3
Q ss_pred EEEeCCCcccccHHHHHHHHHHHHHHc-CCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhcc
Q 026853 12 VILDLDGTLLNTDGMFSEVLKTFLVKY-GKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (232)
|+||+||||+|+...+..++..+++++ +.. .+.+.+....+...... ++..+.+.. ....+..........
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~ 73 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDI----MRIMGLPLE---MEEPFVRESYRLAGE 73 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHH----HHHcCCCHH---HHHHHHHHHHHhhcc
Confidence 689999999999999999999998874 653 34555666666554433 333443311 111111112222346
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
..++||+.++|++|++.|++++++||+....+...+ +++|+..+|+.++++++....||++..+..+++++++++++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 789999999999999999999999999999888888 8999999999999999888899999999999999999999999
Q ss_pred EEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCcccc
Q 026853 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~ 219 (232)
+|||+.+|+.+|+++|+.++++.+|...... ...++++++++.|+...+.
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999987644433 4578999999998876543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=202.43 Aligned_cols=204 Identities=20% Similarity=0.301 Sum_probs=162.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (232)
++++++||+||||+|+...+..++.++++++|.. .+.+.+....+..... +++.++.+ ...+++...+.+.+..
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRT----IVRRAGLSPWQQARLLQRVQRQLGD 136 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHH----HHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999975 4444455555554433 33444443 1223344445554444
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.....+++||+.++|+.|+++|++++|+||+....+...+ +++|+..+|+.+++.+.. .+++..+..++++++++|
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQP 212 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcCh
Confidence 4456789999999999999999999999999999999999 999999999988877654 345789999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-c-chhhhHhhhhccCcCcccc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-R-YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~-~~~~~~~~~~l~el~~~l~ 219 (232)
+++++|||+.+|+.+|+++|+.+++|..|..... . ...|+++++++.|+.+++.
T Consensus 213 ~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 213 AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 9999999999999999999999999998755443 2 4578999999999977653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=197.81 Aligned_cols=204 Identities=20% Similarity=0.239 Sum_probs=155.3
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCC-------------ChH----HHHHHHHHHcCCCcc
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-------------TPL----EEAAIIVEDYGLPCA 71 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----~~~~~~~~~~~~~~~ 71 (232)
+|+|+||+||||+|+......++..++++++...+.......... ... ..+..+++..+....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 589999999999999888888889888888876543322111110 000 112223333443221
Q ss_pred HHhHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCC
Q 026853 72 KHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~ 150 (232)
.+. +...+.... ....++||+.++|++|++. ++++++||+....+...+ +.+++..+|+.++++++.+..||+
T Consensus 81 ~~~----~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~ 154 (224)
T TIGR02254 81 EAL----LNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPD 154 (224)
T ss_pred HHH----HHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCC
Confidence 111 222222222 2467899999999999999 999999999999888888 889999999999999999999999
Q ss_pred HHHHHHHHHhc-CCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 151 PDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 151 ~~~~~~~~~~~-~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
|.+|..+++++ +++|+++++|||+. +|+.+|+++|++++++.++.........+++++++++||.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 99999999999 99999999999998 8999999999999999875443333456788899998887643
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=188.63 Aligned_cols=180 Identities=30% Similarity=0.497 Sum_probs=149.3
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHh---HHHHHHHHHHh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSD 85 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 85 (232)
+++|+||+||||+|+...+..++..++++++...+........+......+..++..++...+..+ +...+...+.+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE 80 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999899999999999987655445566777777777888777643333332 22333344443
Q ss_pred hh--ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 86 HL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 86 ~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
.. ....++||+.++|+.|++.|++++++|++ ..+...+ +++++..+|+.+++++..+..||+|..+..+++++++
T Consensus 81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~ 157 (185)
T TIGR02009 81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGV 157 (185)
T ss_pred HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCC
Confidence 32 34789999999999999999999999998 5567777 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
+++++++|||+.+|+.+|+++|+++++|
T Consensus 158 ~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 158 SPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 9999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=188.79 Aligned_cols=179 Identities=30% Similarity=0.449 Sum_probs=148.8
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHh---HHHHHHHHHHhhh
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHL 87 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 87 (232)
+|+||+||||+|+...+..++.++++.++.+.+........+.+....+..++...+...+.+. +...+...+.+..
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL 80 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988766666777787788888888887776544332 2222223333222
Q ss_pred ---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 88 ---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 88 ---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
....++||+.++|+.|+++|++++++||+.. ....+ +++++..+|+.++++++....||+|+.|..++++++++
T Consensus 81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 157 (185)
T TIGR01990 81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS 157 (185)
T ss_pred HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence 2347899999999999999999999998753 34567 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~ 192 (232)
++++++|||+.+|+.+|+++|+++++|.
T Consensus 158 ~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 158 PSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 9999999999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=195.96 Aligned_cols=202 Identities=21% Similarity=0.303 Sum_probs=147.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh--cCCC-----------hHHH----HHHHHHHcCCCc
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGKT-----------PLEE----AAIIVEDYGLPC 70 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~~~~----~~~~~~~~~~~~ 70 (232)
++|+|+||+||||+|.. ...++.++++++|...+.+..... .+.. .... +..+.+.++.+
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVT- 78 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCC-
Confidence 58999999999999854 256677888888876544433222 1110 0000 11122222221
Q ss_pred cHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCC
Q 026853 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~ 150 (232)
..+....+.+. ......++||+.++|+.|+ .|++++++||+....+...+ +++|+..+|+.++++++.+..||+
T Consensus 79 -~~~~~~~~~~~---~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~ 152 (224)
T PRK09449 79 -PGELNSAFLNA---MAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKPD 152 (224)
T ss_pred -HHHHHHHHHHH---HhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCCC
Confidence 12222222211 1224678999999999999 57999999999999888888 889999999999999999999999
Q ss_pred HHHHHHHHHhcCCCC-CcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 151 PDIFLEAAKRLNMEP-SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
|.+|..+++++|+.+ +++++|||+. +|+.+|+++|+.++++.++.........+++++++++|+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 999999999999854 7999999998 7999999999999999863222222335788999999887654
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-31 Score=212.87 Aligned_cols=213 Identities=15% Similarity=0.192 Sum_probs=167.7
Q ss_pred CccccccccEEEEeCCCcccccHHHHHHHHHHHHHHcC------CCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhH
Q 026853 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF 75 (232)
Q Consensus 2 ~~~~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (232)
++...+|+++|+||+||||+|+...+..++.+++++++ ...+.+.+....|.+....+..+....+.. ..++.
T Consensus 234 ~~~~~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~ 312 (459)
T PRK06698 234 SKGENEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQT 312 (459)
T ss_pred ccchHHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHH
Confidence 33344678999999999999999999999999988874 222345566778888777777766544322 11223
Q ss_pred HHHHHHHHHhhh--ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHH
Q 026853 76 VNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (232)
Q Consensus 76 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~ 153 (232)
...+.+.+.+.. ...+++||+.++|++|+++|++++|+||+....+...+ +++++..+|+.++++++.. .+|+|..
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~ 390 (459)
T PRK06698 313 DAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDL 390 (459)
T ss_pred HHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHH
Confidence 333333333322 24688999999999999999999999999999999999 8999999999999988764 4678889
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+..++++++ +++|++|||+.+|+.+|+++|+.++++.++.........+++++++++|+...+.
T Consensus 391 ~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 391 VKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILS 454 (459)
T ss_pred HHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHH
Confidence 999998875 6899999999999999999999999999876544445578999999999877654
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=189.20 Aligned_cols=203 Identities=40% Similarity=0.670 Sum_probs=164.6
Q ss_pred CCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCc--cHHhHHHHHHHHHHhhhccCCCC
Q 026853 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKAL 93 (232)
Q Consensus 16 lDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (232)
+||||+|+...+..++..+++++++..+.+......|.+....+..+.+..+.+. ..+++................++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 6999999999999999999999998776666667788877777777777766542 23344443333444434567889
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc--ccCCCCCCHHHHHHHHHhcC---CCCCcE
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSS 168 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~--~~~~~kp~~~~~~~~~~~~~---~~~~~~ 168 (232)
||+.++|+.|++.|++++|+||.........+.+..++..+|+.+++++ ++...||+|+.|..++++++ +.+++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 9999999999999999999999987655544425557888999999999 88889999999999999996 999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
++|||+..|+.+|+++|+.+|++.++.........++++++++.|+...=
T Consensus 161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~~ 210 (220)
T PLN02811 161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEE 210 (220)
T ss_pred EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHHH
Confidence 99999999999999999999999886544334557899999999875543
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=194.06 Aligned_cols=208 Identities=26% Similarity=0.396 Sum_probs=152.5
Q ss_pred ccccEEEEeCCCcccccH-HHHHHHHHHHHHHcCCC-C--Ccchhh--hhcCCChHHHHHHHHHHcCCC--------ccH
Q 026853 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKE-W--DGREKH--KIVGKTPLEEAAIIVEDYGLP--------CAK 72 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~-~~~~~~~~~~~~~~~~~-~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~ 72 (232)
..+++|+||+||||+|+. ..+..++..+++++|.+ . +.+.+. ...+.+....... +...+.. ...
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWY-FNENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHH-HHHcCCCccccccCCccc
Confidence 457999999999999999 99899999999999983 2 222221 1144443333322 2222221 011
Q ss_pred ---HhHHH----HHHHHHHhhhc--cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc---cccceeec
Q 026853 73 ---HEFVN----EVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN---ESFSVIVG 140 (232)
Q Consensus 73 ---~~~~~----~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~---~~~~~~~~ 140 (232)
++... .....+.+.+. .+.++||+.++|+.|++.|++++|+||.....+...+ +..+.. ..|+.+ +
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-A 194 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-e
Confidence 11111 22233333332 2579999999999999999999999999998888777 555333 334444 7
Q ss_pred ccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcc
Q 026853 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 141 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~ 217 (232)
++++...||+|.+|..+++++|++|+++++|||+.+|+.+|+++|+.+|+|..|.........++++++++.++...
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 77788899999999999999999999999999999999999999999999998765544446789999999988654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=186.42 Aligned_cols=180 Identities=18% Similarity=0.323 Sum_probs=134.7
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCc---------chhhhhcCC--C----hHHHHHHHHHHcCCCccHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGK--T----PLEEAAIIVEDYGLPCAKH 73 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~ 73 (232)
+|+|+||+||||+|+... ..++.+.+...+..... .......+. . ....+..+++.++......
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDES 79 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHH
Confidence 478999999999998764 33444333222111100 000011111 1 1234455666676653322
Q ss_pred hHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHH
Q 026853 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~ 153 (232)
.... +.+.+....++||+.++|++|+++|++++++||+....+...+ +++|+..+|+.++++++++..||+|.+
T Consensus 80 -~~~~----~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~ 153 (198)
T TIGR01428 80 -AADR----LAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQV 153 (198)
T ss_pred -HHHH----HHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHH
Confidence 1222 2233345678999999999999999999999999999999888 889999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~ 195 (232)
|..+++++|++|+++++|||+.+|+.+|+++|+.+++++++.
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999843
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=191.04 Aligned_cols=205 Identities=16% Similarity=0.176 Sum_probs=146.6
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC------C---cchhhhhcCC-----------ChHHHHHHHHHHc
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW------D---GREKHKIVGK-----------TPLEEAAIIVEDY 66 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~-----------~~~~~~~~~~~~~ 66 (232)
.++|+|+||+||||+|+...+..++..+++.++... . ...+....+. .....+..+++.+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 467999999999999998888887777665442110 0 0111110000 0112344556666
Q ss_pred CCCccHHh-HHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC
Q 026853 67 GLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (232)
Q Consensus 67 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 145 (232)
+.+....+ ........+........++||+.++|++|++. ++++++||+... + +..|+..+|+.++++++.+
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~~ 160 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPHG 160 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhceeEecccCC
Confidence 66522211 11122222333234578999999999999876 999999998765 3 6679999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcc----ccchhhhHhhhhccCcCccc
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----HRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~----~~~~~~~~~~~~l~el~~~l 218 (232)
..||+|.+|..+++++|++|+++++|||+. .|+.+|+++|+.+++++.+.... .....++.++.+++||.+.+
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 999999999999999999999999999995 99999999999999999843221 11245788889988886653
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=182.54 Aligned_cols=175 Identities=31% Similarity=0.531 Sum_probs=147.2
Q ss_pred EEEeCCCcccccHHHHHHHHHH-HHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhccC
Q 026853 12 VILDLDGTLLNTDGMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (232)
|+||+||||+++...+.+++.. +.+.++...+...++...+......+..++..++.. .....+.+.+. ......
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 76 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKL 76 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhcc
Confidence 7899999999998877788876 477888766666666777777777777777766433 22233333332 112567
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
.++||+.++|+.|++.|++++++||.....+...+ +++|+..+|+.++++++.+..||++..|+.++++++++|+++++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 89999999999999999999999999999999899 88999999999999999999999999999999999999999999
Q ss_pred EeCchhhhhhhhhcCCEEEEe
Q 026853 171 IEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v 191 (232)
|||+..|+.+|+++|+.+|+|
T Consensus 156 vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EESSHHHHHHHHHTTSEEEEE
T ss_pred EeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999986
|
... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=189.86 Aligned_cols=108 Identities=15% Similarity=0.230 Sum_probs=100.0
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
....++||+.++|+.|+++|++++++||+....+...+ +++|+..+|+.++++++.+..||+|+.|..+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 45789999999999999999999999999999888888 88999999999999999999999999999999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCEE-EEeCCCCC
Q 026853 168 SLVIEDSVIGVVAGKAAGMEV-VAVPSLPK 196 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~-i~v~~~~~ 196 (232)
|++|||+.+|+.+|+++|+.+ ++|..+..
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 999999999999999999985 66766443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=217.68 Aligned_cols=211 Identities=24% Similarity=0.349 Sum_probs=173.5
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (232)
.+++++|+||+||||+|+...+..++.++++++|.+.+.+.+....+......+..+...++.. ...++....+.+.+.
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 151 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYL 151 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999887777777778877777766666655543 233333334443333
Q ss_pred hhh---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc-cccceeecccccCCCCCCHHHHHHHHHh
Q 026853 85 DHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 85 ~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
+.+ ....++||+.++|++|+++|++++|+||.....+...+ +++++. .+|+.++++++....||+|++|..++++
T Consensus 152 ~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~ 230 (1057)
T PLN02919 152 EKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKI 230 (1057)
T ss_pred HHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHH
Confidence 322 12347999999999999999999999999999998888 889996 7899999999999999999999999999
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhhhhccCcCcc
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPE 217 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~~l~el~~~ 217 (232)
+++.|+++++|||+.+|+++|+++|+.+|+|.++....+. ...++++++++.|+...
T Consensus 231 lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~ 288 (1057)
T PLN02919 231 LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLS 288 (1057)
T ss_pred cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHH
Confidence 9999999999999999999999999999999997544333 46778899999998433
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=181.05 Aligned_cols=178 Identities=28% Similarity=0.352 Sum_probs=136.1
Q ss_pred cEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh------------------cCCChHHH----HHHHHHHcC
Q 026853 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDYG 67 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~~ 67 (232)
|+|+||+||||+|+...+..++..+++++|.+.+....... .+.+.... ....+...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999888889999999999987654332110 13343322 233333344
Q ss_pred CCccHHhHHHHHHHHHHhhh--ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC
Q 026853 68 LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (232)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 145 (232)
.. ...++...+...+.... ....++||+.++|+.|++.|++++|+||.... ....+ +++++..+|+.++++++.+
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l-~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLL-EALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHH-HHCCcHHhcceEEeecccC
Confidence 21 22223323333322221 23578999999999999999999999998765 46677 8889999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEE
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~ 190 (232)
..||+|..|..+++++|++|+++++|||+. +|+.+|+++|+.+|+
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999999999999999999999998 899999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=173.17 Aligned_cols=212 Identities=38% Similarity=0.593 Sum_probs=187.6
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
....+.+++||+||||+++...+.+++..++.++|...++.......|....+..+.++..+..+.+.+++.....+...
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~ 85 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILD 85 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999988888888999999999999999888888899999999888888
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeec--ccccCCCCCCHHHHHHHHHhcC
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~--~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+.+....+.||+.+++..|+..|++++++|+.........+..+.++...|+.++. ..++..+||+|.+|..+++++|
T Consensus 86 ~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 86 RLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred HhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 88888999999999999999999999999999888888888333337777888777 6678889999999999999999
Q ss_pred CCC-CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCc
Q 026853 163 MEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (232)
Q Consensus 163 ~~~-~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~ 216 (232)
..+ +.|++|+|+++.+.+|+.+|+++|+++...-.......++.+++++.++..
T Consensus 166 ~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFKP 220 (222)
T ss_pred CCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccCc
Confidence 999 999999999999999999999999999955555556778888888777643
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=179.73 Aligned_cols=129 Identities=27% Similarity=0.358 Sum_probs=115.1
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
..+++|++.++|+.++.. ++++++||+....+...+ .++|+..+||.++++++.+..||+|++|+.+++++|++|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 999999999998899899 889999999999999999999999999999999999999999
Q ss_pred EEEeCch-hhhhhhhhcCCEEEEeCCCCCcc-ccchhhhHhhhhccCcCcccc
Q 026853 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 169 ~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~~~~~~~l~el~~~l~ 219 (232)
+||||+. ||+.+|+++||.++|++.+.... .....+++.+.++.++.+.+.
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999999 88899999999999999854432 112567888888888876654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=169.94 Aligned_cols=173 Identities=16% Similarity=0.231 Sum_probs=132.3
Q ss_pred cEEEEeCCCcccccHHHHHHHHHHHHHHcC-CCCCcchhhhhcCCChH--------HHHHHHHHHcC-----CCccHHhH
Q 026853 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPL--------EEAAIIVEDYG-----LPCAKHEF 75 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~ 75 (232)
++|+||+||||+|+...+..++..++++++ ...+.+.+....+.+.. ..+...+.... .....+.+
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 468999999999999999999999999997 55565666666554321 11122222111 12233444
Q ss_pred HHHHHHHHHhhh----------ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC
Q 026853 76 VNEVYSMFSDHL----------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (232)
Q Consensus 76 ~~~~~~~~~~~~----------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 145 (232)
...+.+.+.... ....+.++..++|+.|++.|++++|+||.....+...+ +++|+..+|+.++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~ 159 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCP 159 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCC
Confidence 444544444311 12234556799999999999999999999999999999 9999999999999998877
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
. ||+|+.+..++++++++++++++|||+.+|+.+|+++
T Consensus 160 ~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 P-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred C-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 6 9999999999999999999999999999999999874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=167.96 Aligned_cols=175 Identities=30% Similarity=0.436 Sum_probs=123.9
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHH------HHHHHH
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE------VYSMFS 84 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (232)
+++||+||||+++...+..... ................ .........+...++........... ....+.
T Consensus 1 ~vlFDlDgtLv~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (183)
T TIGR01509 1 AILFDLDGVLVDTSSAIEKLVN---REEFPLVPDELGVSAV-GKLELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYD 76 (183)
T ss_pred CeeeccCCceechHHHHHHHHH---HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHH
Confidence 4899999999999776554211 1222111111111111 11222233333334444333332222 222233
Q ss_pred hhhcc--CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 85 DHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 85 ~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
..... .+++||+.++|+.|++.|++++++||+.... ...+ .++|+..+|+.++++++.+..||+|..|+.++++++
T Consensus 77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~ 154 (183)
T TIGR01509 77 AILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG 154 (183)
T ss_pred HHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC
Confidence 32233 6889999999999999999999999999887 5555 568999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
++|+++++|||+..|+.+|+++|+.+|+|
T Consensus 155 ~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 155 LKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=172.17 Aligned_cols=179 Identities=22% Similarity=0.262 Sum_probs=123.0
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHH--------------HHHHHHHHcCCCccHHh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE--------------EAAIIVEDYGLPCAKHE 74 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 74 (232)
+|+|+||+||||+++.. ....+.......+.+ ..+......+..... ....+.+.++.......
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 79 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGHDV 79 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCCCc
Confidence 57999999999999966 555555544444432 111122222222111 11122222222111000
Q ss_pred HHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH--HHHHHhhhcCCccccceeecccccCCCCCCH
Q 026853 75 FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (232)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~ 151 (232)
....+ +.... ....++||+.++|+.|+++|++++++||+.... ....+ ...++..+|+.++++++.+..||+|
T Consensus 80 ~~~~~---~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p 155 (211)
T TIGR02247 80 RIAPV---FPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDP 155 (211)
T ss_pred Cchhh---HHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCH
Confidence 01111 11111 246789999999999999999999999986543 22233 4457888999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.+|..+++++|++|++++||||+..|+.+|+++|+.++++.+
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999999999999999987
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=169.51 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=130.2
Q ss_pred cEEEEeCCCcccccHHHHH-HHHHH--------HHHHcCCCCCcchhhhhcC-CChHHHHHHHHHHcCCCccHHhHHHHH
Q 026853 10 SCVILDLDGTLLNTDGMFS-EVLKT--------FLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
.+|+||+||||++.+.... ..+.. +...+. ..........| ....+....+.+.++.+.+.+.+...+
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFT--MGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGW 78 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHh--cCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 3799999999999753211 11111 111111 01111122233 445566677778777765544444333
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
.+.+ ..++||+.++|+.|++.|++++|+||+........+....++..+|+.++++++.+..||+|+.|+.+++
T Consensus 79 ~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~ 152 (199)
T PRK09456 79 QAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQ 152 (199)
T ss_pred HHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHH
Confidence 3222 3589999999999999999999999998887665552334788899999999999999999999999999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
++|++|+++++|||+..|+.+|+++|+.++++..+
T Consensus 153 ~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 153 AEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred HcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 99999999999999999999999999999999874
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-27 Score=168.90 Aligned_cols=189 Identities=14% Similarity=0.164 Sum_probs=130.3
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh-h
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (232)
|+|+|+||+||||+|+. .++..+++++|++. +.+....+......... .++. +.......+..+... .
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~ 69 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDPGE---LFGC--DQELAKKLIEKYNNSDF 69 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCHHH---Hhcc--cHHHHHHHhhhhhHHHH
Confidence 47999999999999953 34567777888643 34434444322222211 2221 122222222222212 2
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc----ccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~----~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.....++||+.++|+.|++. ++++++||.........+ +.+++.. +|+.+++++. .+|+|+.+..+++++|
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG 144 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC
Confidence 24567999999999999987 578888987666554455 6666654 4566666665 3677899999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhc--CCEEEEeCCCCCccccchhhhHhhhhccCcCc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~ 216 (232)
+++++||||+.+|+.+|+++ |++++++++++. .....+++.+.++.|+..
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHhc
Confidence 88899999999999999999 999999999754 333466699999988753
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=166.05 Aligned_cols=168 Identities=22% Similarity=0.270 Sum_probs=123.8
Q ss_pred cEEEEeCCCcccccHHHHHHHHHHHHH-----HcCCCCCcch-hhh----hcCCChHHHHHHHHHHcCCCccHHhHHHHH
Q 026853 10 SCVILDLDGTLLNTDGMFSEVLKTFLV-----KYGKEWDGRE-KHK----IVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
.+|+||+||||+|+...+..++.+.+. +++++..... +.. ..+.. ...++..... ..+. +
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~----~~~~~~~~~~--~~~~----~ 70 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTT----LAGLMILHEI--DADE----Y 70 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchH----HHHHHHhhCC--CHHH----H
Confidence 369999999999997666666655443 5565332211 110 11211 1112222222 2222 2
Q ss_pred HHHHHhh--hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCC----CCCCHHH
Q 026853 80 YSMFSDH--LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDI 153 (232)
Q Consensus 80 ~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~----~kp~~~~ 153 (232)
.+.+.+. .....+++|+.++|++|+ .+++++||+....+...+ +.+|+..+|+.++++++.+. .||+|..
T Consensus 71 ~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~ 146 (184)
T TIGR01993 71 LRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQA 146 (184)
T ss_pred HHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHH
Confidence 2233321 235678999999999997 479999999999999999 88999999999999988876 5999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
|..+++++|++|+++++|||+..|+.+|+++|+++++|
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-26 Score=165.52 Aligned_cols=192 Identities=19% Similarity=0.218 Sum_probs=129.2
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hh-hcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HK-IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (232)
+.++++++||+||||++++. +..+++.++........ .. ..+ ..........+..+. ... .+ .
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~-------~ 76 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET-----IDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK-GLP-VE-------L 76 (219)
T ss_pred hccCCEEEEeCcccCCCchH-----HHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC-CCC-HH-------H
Confidence 45789999999999999742 34555666653222211 11 111 122222222222221 111 11 1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeec-------cc---ccCCCCCCHH
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-------SD---EVRTGKPSPD 152 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~-------~~---~~~~~kp~~~ 152 (232)
+.+.....+++||+.++|+.|+++|++++|+|++....+...+ +.+++..+|+..+. +. ....++|++.
T Consensus 77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 155 (219)
T TIGR00338 77 LKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGK 155 (219)
T ss_pred HHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccHH
Confidence 2222345679999999999999999999999999999888888 88898887754321 11 1223567899
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh--hccCcCc
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRP 216 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~l~el~~ 216 (232)
.++.++++++++++++++|||+.+|+.+|+.+|+.++ ++. .+.....|++++. ++.+++.
T Consensus 156 ~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~-~~~---~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 156 TLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIA-FNA---KPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred HHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEE-eCC---CHHHHHhchhccCCCCHHHHHh
Confidence 9999999999999999999999999999999999854 432 3444567888866 4455544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=159.61 Aligned_cols=187 Identities=26% Similarity=0.303 Sum_probs=138.7
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh------------------hhcC-CChHHHHHHHHH-H
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH------------------KIVG-KTPLEEAAIIVE-D 65 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~~~~-~ 65 (232)
.+++|+|+||++|||+...+...+.+..+.+.+|+..+..... ...+ .+...++..+.. .
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 4679999999999999876666777888888888774443321 1112 244455553333 3
Q ss_pred cCCCcc--HHhHHHHHH-HHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc
Q 026853 66 YGLPCA--KHEFVNEVY-SMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 141 (232)
Q Consensus 66 ~~~~~~--~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~ 141 (232)
++.... .++....+. ..+... .......+++.++++.||+.|..++++||.+...- ..+ ..+++..+||.++.|
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l-~~~~l~~~fD~vv~S 161 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLL-LPLGLSAYFDFVVES 161 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHh-hccCHHHhhhhhhhh
Confidence 322211 111111111 111111 12456677888999999999999999999987754 455 778999999999999
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~ 194 (232)
+..+..||+|.+|+.+++++++.|++|++|||+. ||+++|+++||.++.|.+.
T Consensus 162 ~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 162 CEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred hhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 9999999999999999999999999999999999 9999999999999999873
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-25 Score=152.18 Aligned_cols=154 Identities=25% Similarity=0.407 Sum_probs=119.5
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhccC
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (232)
+|+||+||||+|+...+..++..++++++. +.+.+....+...... ..... .+.+. .......
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~~-------------~~~~~-~~~~~~~ 63 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIAT-------------SFEEL-LGYDAEE 63 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHHH-------------HHHHH-hCcchhh
Confidence 489999999999988889999999998874 3233333333321111 11111 11111 1122344
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
...+|+.++|+.|+++|++++++||+....+...+ +++ +..+|+.++++++.. .||+|..+..+++++++++ ++++
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence 56799999999999999999999999999998888 666 788899999988887 9999999999999999999 9999
Q ss_pred EeCchhhhhhhhhcC
Q 026853 171 IEDSVIGVVAGKAAG 185 (232)
Q Consensus 171 vgD~~~Di~~a~~~G 185 (232)
|||+..|+.+|+++|
T Consensus 140 iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 140 VGDNLNDIEGARNAG 154 (154)
T ss_pred EeCCHHHHHHHHHcc
Confidence 999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=158.06 Aligned_cols=161 Identities=17% Similarity=0.266 Sum_probs=121.7
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCC--------CCcchhhhhcC--CChHH----HHHHHHHHcCCCccHHhHH
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--------WDGREKHKIVG--KTPLE----EAAIIVEDYGLPCAKHEFV 76 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (232)
+|+||+||||+|+...+..++..++.+.+.. ..........+ ..... .+..+.+.++.....+ .
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-Y- 78 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-H-
Confidence 4899999999999888888887777664321 01111112222 11112 4566667777664332 1
Q ss_pred HHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHH
Q 026853 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~ 156 (232)
.+.+.+.+....++||+.++|+ +++|+||+....+...+ +++++..+|+.++++++++..||+|+.|..
T Consensus 79 ---~~~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~ 147 (175)
T TIGR01493 79 ---GERLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYEL 147 (175)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence 2223333345679999999998 37899999999999888 889999999999999998999999999999
Q ss_pred HHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 157 ~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
+++++|++|++|++|||+..|+.+|+++
T Consensus 148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 148 VFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=158.47 Aligned_cols=196 Identities=17% Similarity=0.156 Sum_probs=131.9
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hhhcC--CChHHHHHHHHHHcCCCccHHhHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (232)
.+++|+|+||+||||++++. +..+++.+|........ ....+ ....+.+...+..... .. ..+...
T Consensus 9 ~~~~k~viFDfDGTL~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~----~~~~~~ 77 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVDEG-----IDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SL----SQVEEF 77 (224)
T ss_pred HccCCEEEEeCCCcccchHH-----HHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CH----HHHHHH
Confidence 35789999999999999743 46677778764333332 22222 2333333333333321 11 122222
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc--cccceeec--------ccc----cCCCC
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVG--------SDE----VRTGK 148 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~--~~~~~~~~--------~~~----~~~~k 148 (232)
+.. ....++||+.++++.|+++|++++|+|++....++..+ +.+|+. .+|+..+. +.. ....+
T Consensus 78 ~~~--~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 154 (224)
T PLN02954 78 LEK--RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSG 154 (224)
T ss_pred HHH--ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCc
Confidence 222 13468999999999999999999999999999999888 888886 35543111 111 12356
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-cccchhhhHhhhhccCcCcc
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~l~el~~~ 217 (232)
+++..++.+++.++. +++++|||+.+|+.+++.+|+.++...++... ......+++++.++.|+..+
T Consensus 155 ~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 155 GKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred cHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 788999999998885 68999999999999999988876554443322 22355688999999888664
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-23 Score=148.64 Aligned_cols=184 Identities=13% Similarity=0.087 Sum_probs=124.7
Q ss_pred ccEEEEeCCCcccccHHHH-------HHHHHHHHHHcCCCCCcchhhhhcCCCh-HHHHHHHHHHcCCC---ccHHhHHH
Q 026853 9 MSCVILDLDGTLLNTDGMF-------SEVLKTFLVKYGKEWDGREKHKIVGKTP-LEEAAIIVEDYGLP---CAKHEFVN 77 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~ 77 (232)
+++|++|+.||+.+-.-.. .+.+..++....-......++...+... ......+......+ ...+.+..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg 80 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG 80 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 5789999999999763221 2223333333221111222222222211 22222333333333 23444444
Q ss_pred H-HHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc---CCccccceeecccccCCCCCCHHH
Q 026853 78 E-VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDI 153 (232)
Q Consensus 78 ~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---~l~~~~~~~~~~~~~~~~kp~~~~ 153 (232)
. |.+.+........++||+.++|++|+++|++++|+||++...+...+ ++. ++..+|+.++.. . ...||+|+.
T Consensus 81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~-~-~g~KP~p~~ 157 (220)
T TIGR01691 81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDT-T-VGLKTEAQS 157 (220)
T ss_pred HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEe-C-cccCCCHHH
Confidence 4 44444444445679999999999999999999999999988777666 654 566777776642 2 337999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~ 195 (232)
|..+++++|++|++++||||+..|+.+|+++|+.++++.++.
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999999999999999998844
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-23 Score=143.19 Aligned_cols=211 Identities=19% Similarity=0.227 Sum_probs=147.9
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHH-----HHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLK-----TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
+++++++||+|+||+.....+....+ .+..++|+..+........-...+...-.-+...+...+..+....+..
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 47899999999999987555544433 3445778765554432222222222222223334444344433322211
Q ss_pred HHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC------CCCCCHHHHH
Q 026853 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDIFL 155 (232)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~------~~kp~~~~~~ 155 (232)
.. -++.+.|.+..+++|-.|+.++ .+++||+...++.+.| +++|+.++|+.+++.+... ..||.+++|+
T Consensus 93 ~L--Plq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~afE 167 (244)
T KOG3109|consen 93 RL--PLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFE 167 (244)
T ss_pred cC--cHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHHHH
Confidence 11 1245788899999999988763 8999999999999999 9999999999999876544 4699999999
Q ss_pred HHHHhcCCC-CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCCCC
Q 026853 156 EAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223 (232)
Q Consensus 156 ~~~~~~~~~-~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~~~ 223 (232)
.+++..|+. |.+++||+||.++|..|++.|+.++++...+.. ..-..+-..+....+..+.++..+.
T Consensus 168 ~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~-~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 168 KAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI-KGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred HHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc-cchHHHHHHhhchhhhchHHhhccc
Confidence 999999998 999999999999999999999999999883322 2223444455566666777776544
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=150.60 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=88.5
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCC----------CCHHHHHH
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK----------PSPDIFLE 156 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~k----------p~~~~~~~ 156 (232)
+...+++||+.++|+.|+++|++++|+|++....+...+ +.+|+..+|+..+..++.+..+ +++..++.
T Consensus 76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 345689999999999999999999999999999999888 8889888877665554333222 33468889
Q ss_pred HHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 157 ~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++++++++++++++|||+.+|+.+++.+|+.++....
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDE 191 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC
Confidence 9999999999999999999999999999998666554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=158.23 Aligned_cols=184 Identities=15% Similarity=0.151 Sum_probs=126.1
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh--hhcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
..+++++||+||||+.. +.+.++++.+|.......+. ...+ ...............- ..++. +
T Consensus 108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g--~~~~i-------l 173 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG--ADANI-------L 173 (322)
T ss_pred cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCC--CCHHH-------H
Confidence 46899999999999943 44566666676644333221 1222 1222222222221110 11111 1
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc-------eeeccc---ccCCCCCCHHH
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDI 153 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~-------~~~~~~---~~~~~kp~~~~ 153 (232)
+......++.||+.++++.|++.|++++|+|++........+ +++++...+. ..+++. +....+|++..
T Consensus 174 ~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~ 252 (322)
T PRK11133 174 QQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT 252 (322)
T ss_pred HHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence 222245789999999999999999999999999988777666 7788865443 112121 23356899999
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 209 (232)
++++++++|+++++|++|||+.||+.|++.+|+.+++ +..+..+..|++.++
T Consensus 253 L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~----nAkp~Vk~~Ad~~i~ 304 (322)
T PRK11133 253 LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY----HAKPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe----CCCHHHHhhCCEEec
Confidence 9999999999999999999999999999999977665 346777888888875
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=147.27 Aligned_cols=128 Identities=14% Similarity=0.182 Sum_probs=102.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchH--------HHHHHHhhhcCCccccceee-cccccCCCCCCHHHHHHHHHh
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~--------~~~~~l~~~~~l~~~~~~~~-~~~~~~~~kp~~~~~~~~~~~ 160 (232)
..++||+.++|++|++.|++++|+||.... .....+ +.+|+..+|.... .++.....||+|..|.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 368999999999999999999999998641 123335 5666655543332 455667899999999999999
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc-------cc-chhhhHhhhhccCcCccc
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-------HR-YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-------~~-~~~~~~~~~~l~el~~~l 218 (232)
++++|++++||||+.+|+.+|+++|+.++++.++.... .. ...++++++++.|+...+
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 99999999999999999999999999999999865332 11 346889999999987654
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=149.26 Aligned_cols=127 Identities=28% Similarity=0.313 Sum_probs=102.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccccceeecc-----cccCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~~~~~~~~-----~~~~~~kp 149 (232)
+.++||+.++|++|++.|++++|+||... ..+...+ +++++ .|+.++.+ +.....||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 46899999999999999999999999863 2233345 55565 47766543 34567999
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhh--hHhhhhccCcCcccc
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDLRPEKW 219 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~--~~~~~~l~el~~~l~ 219 (232)
+|..|..+++++|++++++++|||+.+|+.+|+++|+.++++..|...... ...+ +++++++.|+..++.
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999886543222 3345 889999998877654
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=146.58 Aligned_cols=123 Identities=24% Similarity=0.309 Sum_probs=99.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccccceeecc-----------cc
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DE 143 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~~~~~~~~-----------~~ 143 (232)
..++||+.++|++|+++|++++++||.+. ..+...+ ...++. |+.++.+ +.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCC
Confidence 46899999999999999999999999974 2233344 444553 6665432 24
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEE-EEeCCCCCcccc-chhhhHhhhhccCcC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLR 215 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~-~~~~~~~~~~l~el~ 215 (232)
....||+|..|..+++++++++++++||||+.+|+.+|+++|+.+ +++.+|...... ...|+++++++.||.
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 557899999999999999999999999999999999999999998 798887554333 346899999999885
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=137.71 Aligned_cols=103 Identities=26% Similarity=0.359 Sum_probs=85.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccc--ccee-ecccccCCCCCCHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNES--FSVI-VGSDEVRTGKPSPD 152 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~--~~~~-~~~~~~~~~kp~~~ 152 (232)
.++||+.++|+.|+++|++++|+||... ..+...+ +++++... |... .+++.....||+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 6899999999999999999999999873 3445556 77777521 1111 12455566899999
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+++.++++++++++++++|||+..|+.+|+++|+.++++++|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 999999999999999999999999999999999999999874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-21 Score=140.02 Aligned_cols=147 Identities=16% Similarity=0.118 Sum_probs=106.1
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCC-CcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhcc
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (232)
+|+||+||||+|+...+ .+|... +...+..+.+.. .+..+.+.. -..
T Consensus 65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~--------------------~w~~~~~~~---~~~ 112 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQV--------------------FWEKVNNGW---DEF 112 (237)
T ss_pred EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChH--------------------HHHHHHHhc---ccC
Confidence 89999999999997655 144332 222222222221 122222221 123
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCC----chHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~----~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
..+.+++.++|++++++|++++++||. ....+...+ +++|+..+|+.+++++.....||++. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i-- 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI-- 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC--
Confidence 456777999999999999999999998 445566666 88999999999998888777777764 35566776
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
++||||+.+|+.+|+++|+.++.|.++...
T Consensus 187 --~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 187 --RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred --eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 799999999999999999999999885433
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-22 Score=138.08 Aligned_cols=107 Identities=16% Similarity=0.072 Sum_probs=95.4
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCC-chHHHHHHHhhhcCCc---------cccceeecccccCCCCCCHHHHHHHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEAA 158 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~~l~---------~~~~~~~~~~~~~~~kp~~~~~~~~~ 158 (232)
...++||+.++|+.|+++|++++++||. ....++..+ +.+++. .+|+.+++++.....||.+.+++.+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4678999999999999999999999998 788788888 888988 99999999887666777777777777
Q ss_pred Hhc--CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC
Q 026853 159 KRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (232)
Q Consensus 159 ~~~--~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~ 196 (232)
+.+ +++|++|+||||+..|+.+|+++|+.++++..|..
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 777 89999999999999999999999999999988543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.8e-22 Score=143.92 Aligned_cols=192 Identities=13% Similarity=0.117 Sum_probs=124.1
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh---cCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI---VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
-++|+||+||||++.+... . ++++++. ..++.+... -.....+.+...++.+.... .+.+.+.+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~- 70 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNL-----KEEIIQFLL- 70 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCc-----hHHHHHHHH-
Confidence 3589999999999987643 2 3334432 222222211 11234455566666543221 122222222
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc--cc--ceeecccccCCCCCCHHH--------
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI-------- 153 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~--~~--~~~~~~~~~~~~kp~~~~-------- 153 (232)
...+++||+.++|+.|+++|++++|+|++....+...+ +++ +.. .+ +..+.++.....||.|..
T Consensus 71 --~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 71 --ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred --hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 34689999999999999999999999999999999888 665 533 22 333444555556666543
Q ss_pred --HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC--CccccchhhhHhhhhccCcCcccc
Q 026853 154 --FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP--KQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 154 --~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~--~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
...++++++..++++++|||+.+|+.+|+.+|+..+ .+. ...+....+...++++.|+.+.+.
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a---~~~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA---RDFLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee---HHHHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 357888999999999999999999999999997333 211 111123446666777777766543
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=133.76 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=90.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCc---------------hHHHHHHHhhhcCCccccceee-c----ccccCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKP 149 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~~~l~~~~~~~~-~----~~~~~~~kp 149 (232)
+.++||+.++|++|+++|++++|+||.. ...+...+ +.+|+. |+.++ + +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 5789999999999999999999999963 34556666 888885 77554 4 477888999
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
++..+..+++++++++++++||||+.+|+.+|+++|+.++++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 999999999999999999999999999999999999999999883
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-21 Score=139.95 Aligned_cols=189 Identities=17% Similarity=0.117 Sum_probs=118.6
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC-CChHHHHHHHHHHcC-CCccHHhHHHHHHHHHHhh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYG-LPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 86 (232)
+++|+||+||||++ +.+..+.+++|.+.... + ..+ ......+........ ...+.+++ ...
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------~~~ 63 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRA-T--TRDIPDYDVLMKQRLDILDEHGLGLADI--------QEV 63 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHHH-H--hcCCCCHHHHHHHHHHHHHHcCCCHHHH--------HHH
Confidence 37899999999993 23455667777642111 0 001 112222221221111 01112211 222
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc----cCCCCCCHHHHHHHHHhcC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~----~~~~kp~~~~~~~~~~~~~ 162 (232)
....+++||+.++|+.|+++ ++++|+|++....+...+ +++++..+|+..+...+ .+..++.|.....+++.++
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 34567899999999999999 999999999999999888 88999887765432211 1122233444556666777
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhH-hhhhccCcCcccc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE-VINSLLDLRPEKW 219 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~-~~~~l~el~~~l~ 219 (232)
..++++++||||.+|+.+++.+|+.. .++. ........+++ +++++.|+...+.
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~--~~~~~~~~~~~~~~~~~~el~~~l~ 196 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAGI-LFRP--PANVIAEFPQFPAVHTYDELLAAID 196 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCCE-EECC--CHHHHHhCCcccccCCHHHHHHHHH
Confidence 77899999999999999999999754 3433 11111234454 7899998877655
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=126.71 Aligned_cols=97 Identities=24% Similarity=0.445 Sum_probs=84.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCc--------hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhc-
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL- 161 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~--------~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~- 161 (232)
.++|++.++|+.|++.|++++++||.. ...+...+ +++++. ++..+.+. ...||+++.|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVP--IDVLYACP--HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcC
Confidence 588999999999999999999999998 77777777 888885 33333333 56799999999999999
Q ss_pred CCCCCcEEEEeC-chhhhhhhhhcCCEEEEeC
Q 026853 162 NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVP 192 (232)
Q Consensus 162 ~~~~~~~~~vgD-~~~Di~~a~~~G~~~i~v~ 192 (232)
++++++++|||| +.+|+.+|+.+|+.+++++
T Consensus 100 ~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 100 EIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 599999999999 6899999999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=127.00 Aligned_cols=103 Identities=31% Similarity=0.466 Sum_probs=92.8
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCC----------------CCCH
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPSP 151 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~----------------kp~~ 151 (232)
....+++++.++++.|+++|++++++|++....+...+ +..++...++.+++....... ||++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45689999999999999999999999999999998888 888888888888877655444 9999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
..+..+++.++.+++++++|||+.+|+.+++.+|+.+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 100 DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 9999999999999999999999999999999999998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=129.40 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=79.5
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc--------------------cCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTGK 148 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~--------------------~~~~k 148 (232)
..++.|++.++++.|++.|++++++|++....+...+ +++++..+|+.+++.+. ...+.
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 4689999999999999999999999999999998888 88899999998886532 12334
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCC
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
+|+..++++.+.. +++++||||+.+|+++|+++++
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCc
Confidence 5677888777665 7999999999999999999983
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-20 Score=129.65 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=82.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchH------------HHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~------------~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~ 158 (232)
.++||+.++|+.|++.|++++|+||.+.. .+...+ +++|+.. +.+++++.....||+|..+..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 37899999999999999999999998653 355667 8888843 56666666567899999999999
Q ss_pred HhcC--CCCCcEEEEeCch--------hhhhhhhhcCCEEEE
Q 026853 159 KRLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA 190 (232)
Q Consensus 159 ~~~~--~~~~~~~~vgD~~--------~Di~~a~~~G~~~i~ 190 (232)
++++ +++++++||||+. +|+.+|+++|+.+++
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 9999 9999999999996 699999999988754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=127.62 Aligned_cols=181 Identities=16% Similarity=0.120 Sum_probs=113.1
Q ss_pred cEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCC-ChHHHHHHHH---HHcCCCccHHhHHHHHHHHHHh
Q 026853 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-TPLEEAAIIV---EDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
++++||+||||++. .|.++..+.|... .. .. ..+. .........+ +..|.+ .+.+ ++
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~-~~-~~-~~~~~~~~~~~~~r~~ll~~~g~~--~~~i--------~~ 62 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDA-LK-AT-TRDIPDYDVLMKQRLRILDEHGLK--LGDI--------QE 62 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcH-HH-HH-hcCCcCHHHHHHHHHHHHHHCCCC--HHHH--------HH
Confidence 56999999999964 3566777777422 11 11 1111 1122222111 112333 2222 22
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce--------eecccccCCCCCCHHHHHHH
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~--------~~~~~~~~~~kp~~~~~~~~ 157 (232)
....++++||+.++++.+++.+ +++|+|++....+...+ +++|+..+|.. .+++... ..++.+..+...
T Consensus 63 ~~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~ 139 (203)
T TIGR02137 63 VIATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIA 139 (203)
T ss_pred HHHhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHH
Confidence 2345689999999999999975 99999999999999888 89999887753 2222211 234444444444
Q ss_pred HHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchh-h-hHhhhhccCcCcccc
Q 026853 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA-A-DEVINSLLDLRPEKW 219 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~-~-~~~~~~l~el~~~l~ 219 (232)
+++.+. ++++||||.||+.|++.+|...++... +..... + -.++.+++|++..+.
T Consensus 140 l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak----~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 140 FKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP----ENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred HHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC----HHHHHhCCCCCcccCHHHHHHHHH
Confidence 455553 799999999999999999988666655 222221 2 234566777766554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-21 Score=141.93 Aligned_cols=125 Identities=19% Similarity=0.168 Sum_probs=100.5
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc---CCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---RTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~---~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
++++.+.++.|+..+.++++.||.......... ...++..+|+.+..+... ..+||+|..++.+++++++++++++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 567788888898888999999998776655455 566777778766544332 2479999999999999999999999
Q ss_pred EEeCch-hhhhhhhhcCCEEEEeCCCCCc-c---ccchhhhHhhhhccCcCccc
Q 026853 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-T---HRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 170 ~vgD~~-~Di~~a~~~G~~~i~v~~~~~~-~---~~~~~~~~~~~~l~el~~~l 218 (232)
||||+. +|+.+|+.+|+.+++|.+|... . .....|+++++++.|+.+++
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 999997 9999999999999999987432 2 12456889999999987654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-20 Score=141.51 Aligned_cols=122 Identities=25% Similarity=0.332 Sum_probs=93.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceee---cccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.++++.+.++.|++.|. ++++||.+............++..+|+.+. ..+....+||+|..+..++++++++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 36788999999998886 789998876443111113445555665543 23455678999999999999999999999
Q ss_pred EEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc-c---------hhhhHhhhhccCc
Q 026853 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---------TAADEVINSLLDL 214 (232)
Q Consensus 169 ~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~---------~~~~~~~~~l~el 214 (232)
+||||+. .||.+|+++|+.+++|.+|....+. . ..|+++++++.|+
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999996 9999999999999999997654333 1 3588999988875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-19 Score=126.78 Aligned_cols=115 Identities=21% Similarity=0.256 Sum_probs=90.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc----------cCCCCCCHHHHHHHHH
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAAK 159 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~----------~~~~kp~~~~~~~~~~ 159 (232)
.++.||+.++++.+++.|++++|+|++....++... +.+|+...+......++ ...++.+...+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 789999999999999999999999999999888777 99999887765544433 1123446678889999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 209 (232)
.+|+++++++++|||.||+.|.+.+|.+ +.++. .+.....++....
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~-ia~n~---~~~l~~~a~~~~~ 200 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLP-IAVNP---KPKLRALADVRIW 200 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCC-eEeCc---CHHHHHHHHHhcC
Confidence 9999999999999999999999999977 44443 2334444444333
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-18 Score=122.03 Aligned_cols=120 Identities=14% Similarity=0.146 Sum_probs=90.9
Q ss_pred ccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce-eec-------c
Q 026853 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVG-------S 141 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~-~~~-------~ 141 (232)
.+.+++.....+.+.+.. ...++|++.++++.++++|++++|+|++....++..+ +++|+...|.. +.. +
T Consensus 67 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g 144 (202)
T TIGR01490 67 LLEEDVRAIVEEFVNQKI-ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTG 144 (202)
T ss_pred CCHHHHHHHHHHHHHHHH-HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeC
Confidence 334555444444444332 3468999999999999999999999999999888888 88898877654 221 1
Q ss_pred c---ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 142 D---EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 142 ~---~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
. ....++++...+++++++.++++++++++|||.+|+.+++.+|..++..
T Consensus 145 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 NIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 1 1123456677789999999999999999999999999999999775443
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-18 Score=118.30 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=83.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCc-hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
.++|++.++|+.|++.|++++++||.. ...+...+ +.+++..+ ....||+|..+..+++++++++++++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~~l 112 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQVA 112 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 568899999999999999999999998 45555444 66665322 13469999999999999999999999
Q ss_pred EEeCch-hhhhhhhhcCCEEEEeCCCCCccc
Q 026853 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 170 ~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
+|||+. .|+.+|+++|+.+++|.+|....+
T Consensus 113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~ 143 (170)
T TIGR01668 113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPDQ 143 (170)
T ss_pred EECCcchHHHHHHHHcCCeEEEEccCcCCcc
Confidence 999998 799999999999999998764443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-18 Score=127.04 Aligned_cols=90 Identities=31% Similarity=0.438 Sum_probs=77.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
.++.|++.++|+.|++.|++++++|+.....+.... +.+|+.. ..+.+... +||.+.++..+++.+++++++|+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi~~---~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGIFD---SIVFARVI--GKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTSCS---EEEEESHE--TTTHHHHHHHHHHHHTCTGGGEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccc-ccccccc---cccccccc--ccccchhHHHHHHHHhcCCCEEE
Confidence 368899999999999999999999999999888888 8889833 22222221 79999999999999999999999
Q ss_pred EEeCchhhhhhhhhcC
Q 026853 170 VIEDSVIGVVAGKAAG 185 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G 185 (232)
||||+.||+.|+++||
T Consensus 200 ~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 200 MVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEESSGGHHHHHHHSS
T ss_pred EEccCHHHHHHHHhCc
Confidence 9999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.6e-18 Score=122.42 Aligned_cols=190 Identities=16% Similarity=0.162 Sum_probs=115.8
Q ss_pred EEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh---cCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhc
Q 026853 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI---VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (232)
|+||+||||++.+... .+++.+.. ..+..+... -..+..+.+...++...... . ..+.+.+. .
T Consensus 2 ~~fDFDgTit~~d~~~-----~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-~----~~~~~~~~---~ 67 (214)
T TIGR03333 2 IICDFDGTITNNDNII-----SIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-K----EEITSFVL---E 67 (214)
T ss_pred EEeccCCCCCcchhHH-----HHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCch-H----HHHHHHHH---h
Confidence 7999999999775421 22222221 111112111 12335555566665543331 1 12222222 2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc---ceeecccccCCCCCCHHHH----------H
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------L 155 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~---~~~~~~~~~~~~kp~~~~~----------~ 155 (232)
..+++||+.++++.|++.|++++|+|++....+...+ +.++....+ +..+.++.....+|.+..+ .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 4689999999999999999999999999999888888 665433333 2334444445556665543 4
Q ss_pred HHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC--CccccchhhhHhhhhccCcCcccc
Q 026853 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP--KQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~--~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
.++++++..++++++|||+.+|+.+|+.+|+ .+.++. ...+....+.....++.|+...|.
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~---~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL---CFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe---eEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 6677777788999999999999999999995 444421 111112234455566666655543
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.6e-18 Score=119.12 Aligned_cols=96 Identities=21% Similarity=0.227 Sum_probs=78.2
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc------------ccCCCCCCHHHHH
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPDIFL 155 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~------------~~~~~kp~~~~~~ 155 (232)
..+++.|++.++++.++++|++++|+|++....++..+ +++|+...+...+..+ ....+..|+..++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 34568999999999999999999999999999999888 8888887665433221 1223445667888
Q ss_pred HHHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
..+++++++++++++||||.+|+.+++.+
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88899999999999999999999999764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=115.33 Aligned_cols=88 Identities=19% Similarity=0.166 Sum_probs=76.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCC-chHHHHHHHhhhcC-------CccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~~-------l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.++||+.++|+.|+++|++++++||. ....+...+ +..+ +..+|+.+++++. +|+|+.+..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg 103 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN 103 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence 58899999999999999999999999 777777777 7777 7888888877753 588999999999999
Q ss_pred --CCCCcEEEEeCchhhhhhhhh
Q 026853 163 --MEPSSSLVIEDSVIGVVAGKA 183 (232)
Q Consensus 163 --~~~~~~~~vgD~~~Di~~a~~ 183 (232)
++|++++||||+..|+...+.
T Consensus 104 ~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 104 GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.3e-18 Score=128.74 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=86.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCC---------------chHHHHHHHhhhcCCccccceee-c----ccccCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIV-G----SDEVRTGKP 149 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---------------~~~~~~~~l~~~~~l~~~~~~~~-~----~~~~~~~kp 149 (232)
..++||+.++|+.|++.|++++|+||. ....+...+ +.+++. |+.++ + +++....||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCcccCCCCCC
Confidence 579999999999999999999999995 233344455 666773 66654 3 356678899
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
+|..+..+++.+++.+++++||||+.+|+.+|+++|+.+++++.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 99999999999999999999999999999999999999999976
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.4e-18 Score=127.53 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=77.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCch-H---HHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHR-A---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~-~---~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
++++.+++..++..+..+.++++... . .....+.+.+++.......-..+....+..++.+++.+++.+|++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 45566677777666666666665432 1 1112221434432111100011344455668889999999999999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
++|||+.||++|++.+|+ .|++++..+..+..|++++.+..+
T Consensus 219 i~~GD~~NDi~m~~~ag~---~vamgna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 219 VAFGDNFNDISMLEAAGL---GVAMGNADDAVKARADLVIGDNTT 260 (272)
T ss_pred EEeCCChhhHHHHHhcCc---eEEecCchHHHHHhCCEEEecCCC
Confidence 999999999999999994 566666677778888888876544
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-17 Score=118.69 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=78.7
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCc----hHHHHHHHhhhcCC--ccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~----~~~~~~~l~~~~~l--~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
...+.||++++|+.|+++|++++++||.. .......+ +.+|+ ..+|+.+++++.. .|+++.. .+++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcC
Confidence 46789999999999999999999999964 33444444 67899 7888888877653 5666543 555666
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~ 196 (232)
+ ++||||+.+|+.+|+++|+.++.+.+|..
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 5 89999999999999999999999998644
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-18 Score=126.22 Aligned_cols=73 Identities=23% Similarity=0.337 Sum_probs=63.3
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhhhhccCc
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL 214 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~l~el 214 (232)
+....+||+|..++.+++++++++++++||||+. +|+.+|+++|+.+++|.+|....+. ...++++++++.|+
T Consensus 168 ~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 168 KPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 3445689999999999999999999999999997 8999999999999999997665443 24688999999887
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-18 Score=128.18 Aligned_cols=79 Identities=27% Similarity=0.376 Sum_probs=64.5
Q ss_pred ceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc--c--hhhhHhhhh
Q 026853 136 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR--Y--TAADEVINS 210 (232)
Q Consensus 136 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~--~--~~~~~~~~~ 210 (232)
....+.+....+||+|..++.+++++++++++++||||+. +|+.+|+++|+.+++|.+|....+. . ..+++++++
T Consensus 166 ~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~ 245 (249)
T TIGR01457 166 EVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSS 245 (249)
T ss_pred HHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCC
Confidence 3344455666789999999999999999999999999997 8999999999999999987654332 1 357788888
Q ss_pred ccCc
Q 026853 211 LLDL 214 (232)
Q Consensus 211 l~el 214 (232)
++|+
T Consensus 246 l~~~ 249 (249)
T TIGR01457 246 LAEW 249 (249)
T ss_pred hhhC
Confidence 7764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-18 Score=131.49 Aligned_cols=110 Identities=21% Similarity=0.201 Sum_probs=82.1
Q ss_pred CEEEEeCCchHH-HHHHHhhhcCCccccceeeccccc---CCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhh
Q 026853 109 PMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEV---RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKA 183 (232)
Q Consensus 109 ~~~i~s~~~~~~-~~~~l~~~~~l~~~~~~~~~~~~~---~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~ 183 (232)
.++++||.+... ....+ ...|...+|+.+...... ..+||+|..+..+++++++++++++||||+. +|+.+|++
T Consensus 188 ~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~ 266 (311)
T PLN02645 188 CLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN 266 (311)
T ss_pred CEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence 577777776533 12222 344555566666544332 2469999999999999999999999999998 99999999
Q ss_pred cCCEEEEeCCCCCcccc------chhhhHhhhhccCcCcccc
Q 026853 184 AGMEVVAVPSLPKQTHR------YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 184 ~G~~~i~v~~~~~~~~~------~~~~~~~~~~l~el~~~l~ 219 (232)
+|+.+++|.+|....+. ...|+++++++.++.+++.
T Consensus 267 aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 267 GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999887554332 1468999999999877654
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.5e-16 Score=112.22 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=106.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHH-HHcCCCCCc-chhhhhcCCChHHHHHH-------HHHH--cCCCccHHhHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFL-VKYGKEWDG-REKHKIVGKTPLEEAAI-------IVED--YGLPCAKHEFV 76 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~ 76 (232)
..|+++||+||||++.+ ....+..++ ++++..... .......+.+....... ++-. .+.+ .+++.
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~--~~~~~ 80 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHS--EARLQ 80 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCC--HHHHH
Confidence 45799999999999543 334444444 777754322 33444445433221111 1111 1222 22222
Q ss_pred HHHHHHHHhhh-ccCCCCCcHHHHH-HHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc--------ccCC
Q 026853 77 NEVYSMFSDHL-CKVKALPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--------EVRT 146 (232)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~~~~~~~l-~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~--------~~~~ 146 (232)
.+.+.+.+.+ ....++||+.+.| +.+++.|++++|+|+.....++..+ ..+++.. .+.++++. ..+.
T Consensus 81 -~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~ 157 (211)
T PRK11590 81 -ALEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTL 157 (211)
T ss_pred -HHHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCc
Confidence 2222232222 2256799999999 5688889999999999999998888 7777522 23333332 1111
Q ss_pred CCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
..-..+-..++.+.++.+...+.++|||.+|+.|+..+|-+ ++|+.
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp 203 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTP 203 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCC-EEECc
Confidence 11112334445555676777889999999999999999965 55654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.1e-16 Score=104.85 Aligned_cols=193 Identities=16% Similarity=0.128 Sum_probs=119.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh--hhhcCC-ChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
...++++||+|.|++.. +.+.++.+..|+...-... +.+-|. +..+.+...+..+. .+...+.+..
T Consensus 14 ~~~~aVcFDvDSTvi~e-----EgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llq------p~~~qv~~~v 82 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQE-----EGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQ------PLQVQVEQFV 82 (227)
T ss_pred HhcCeEEEecCcchhHH-----hhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhc------ccHHHHHHHH
Confidence 35689999999999954 3344444444543222222 112221 11222222222111 1111122111
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc--cccee--------ecc-c---ccCCCCC
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVI--------VGS-D---EVRTGKP 149 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~--~~~~~--------~~~-~---~~~~~kp 149 (232)
. -+...+.||+++++..|++.|..++++|++....+.... ..+|++. .+... +.+ + ....+-.
T Consensus 83 ~--~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsgg 159 (227)
T KOG1615|consen 83 I--KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGG 159 (227)
T ss_pred h--cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCc
Confidence 1 135778999999999999999999999999999998877 8888875 22211 111 1 1122334
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCc
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~ 216 (232)
+++.+..+.+ +.....++||||+.+|+++... |...++...-.-++..+..+.+.+.++..|..
T Consensus 160 Ka~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~L~~ 223 (227)
T KOG1615|consen 160 KAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYVLGG 223 (227)
T ss_pred cHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHHHcc
Confidence 5677777777 7888899999999999999888 43344444434445557888888888877654
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-17 Score=121.40 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=68.6
Q ss_pred EEEeCCchHHHHHHHhhhcCCccccceee---cccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCE
Q 026853 111 ALASNSHRATIESKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 111 ~i~s~~~~~~~~~~l~~~~~l~~~~~~~~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~ 187 (232)
.+.++...+.+...+ +..+. .+..+. ..+....+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+
T Consensus 119 ~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~- 194 (230)
T PRK01158 119 ALRRTVPVEEVRELL-EELGL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGF- 194 (230)
T ss_pred eecccccHHHHHHHH-HHcCC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCc-
Confidence 334444444455555 44442 122211 12444567788999999999999999999999999999999999994
Q ss_pred EEEeCCCCCccccchhhhHhhhhccC
Q 026853 188 VVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 188 ~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
.+.+++..++.+..+++++.+..+
T Consensus 195 --~vam~Na~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 195 --GVAVANADEELKEAADYVTEKSYG 218 (230)
T ss_pred --eEEecCccHHHHHhcceEecCCCc
Confidence 455666677888888888876443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-15 Score=107.70 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=114.0
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC-CChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHHhhhc
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLC 88 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (232)
+++||+|+||++.+.. ..+++.++...-...+..... ..+...+..+++.+... ...++ +.+...
T Consensus 2 LvvfDFD~TIvd~dsd-----~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~--------I~~~l~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-----DWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPED--------IRDALR 68 (234)
T ss_pred EEEEeCCCCccCCccH-----HHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHH--------HHHHHH
Confidence 6899999999987542 122344443322233333322 22334445555444211 12222 233346
Q ss_pred cCCCCCcHHHHHHHH--HhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc--------------------cCC
Q 026853 89 KVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRT 146 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l--~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~--------------------~~~ 146 (232)
.+++.||+.++++.+ .+.|+.++|+|++....++..| ++.|+...|+.+++... .+.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 789999999999999 4579999999999999999999 99999999888775421 011
Q ss_pred CCCCHHHHHHHHHh---cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 147 GKPSPDIFLEAAKR---LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 147 ~kp~~~~~~~~~~~---~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.-.|...+++.++. -|++..+++|||||.||+.++..++-.-+..++
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 12356777777766 377889999999999999999998866556655
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=97.99 Aligned_cols=121 Identities=16% Similarity=0.119 Sum_probs=91.9
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc---CCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
..+++|++.+.|++.++.|.+++|.|.++-..+.-.. .+. .+..+|+..+-. ..-.|.....|.++++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~F-ghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFF-GHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhh-cccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCc
Confidence 4579999999999999999999999999877554333 332 355566665522 2235666678999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
.+++|..|..+.+.+|+.+|+.+..+.+....+-.......+.+|++
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 99999999999999999999999999984444333333444455554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-16 Score=117.33 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=71.4
Q ss_pred EEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEE
Q 026853 110 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (232)
Q Consensus 110 ~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~ 188 (232)
..+.+....+.....+ +.++....+ ......+....+.+++.+++.+++.+|++++++++|||+.||+.|++.+|
T Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag--- 185 (225)
T TIGR01482 110 VKMRYGIDVDTVREII-KELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPG--- 185 (225)
T ss_pred EEEeecCCHHHHHHHH-HhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcC---
Confidence 3444444455555555 555542111 00112244566788899999999999999999999999999999999999
Q ss_pred EEeCCCCCccccchhhhHhhhhccC
Q 026853 189 VAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 189 i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+.+.+++..++.+..|++++.+..+
T Consensus 186 ~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 186 FGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred ceEEcCChhHHHHHhcCeecCCCCC
Confidence 5666777788888999998876544
|
catalyze the same reaction as SPP. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-15 Score=110.25 Aligned_cols=75 Identities=27% Similarity=0.405 Sum_probs=66.6
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhhhhccCcCcccc
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~l~el~~~l~ 219 (232)
..+||.+.+++.+++.++..+++++||||+. +||.+++++|+.+++|.+|....+. ...++++.+|+.|+...+.
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALK 266 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhh
Confidence 5789999999999999999999999999999 8999999999999999998765444 4678999999999876554
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-16 Score=108.03 Aligned_cols=98 Identities=13% Similarity=0.162 Sum_probs=83.5
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.+..|++.|++++|+|+.....+...+ +++++..+|+.+ ||+|..++.++++++++++++++|||+.||+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 467788889999999999999999999 999998877642 7899999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhh
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 209 (232)
.|++.+|+. +.+.+..+..+..|++++.
T Consensus 112 ~~~~~ag~~---~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 112 SMMKRVGLA---VAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred HHHHHCCCe---EECcCchHHHHHhCCEEcC
Confidence 999999955 4444446666777777764
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-15 Score=114.87 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=94.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc-ccceeeccc-------ccCCCCCCHHHHHHHHHhc
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~~~~~~~-------~~~~~kp~~~~~~~~~~~~ 161 (232)
..++|++.++++.|++.|++++++|+.+.......+ +++++.. +|+.+++.+ +...+||+|..+..+++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 357899999999999999999999999999888888 8889886 899888877 3456899999999999999
Q ss_pred CC-CCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 162 NM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 162 ~~-~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+. +++++++|||+.+|+.+|+++|+.+++|.+|
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 88 6799999999999999999999999999774
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.6e-16 Score=117.17 Aligned_cols=69 Identities=20% Similarity=0.115 Sum_probs=58.9
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+....+..+..+++.+++++|++++++++|||+.||++|.+.+| ..|++++..+..+..|++++.+..+
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTSNDE 250 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCCccc
Confidence 34567788899999999999999999999999999999999999 7778877888888888876655443
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-15 Score=91.21 Aligned_cols=69 Identities=32% Similarity=0.484 Sum_probs=62.8
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCc-hhhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhhhhccCc
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL 214 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~l~el 214 (232)
.+||+|.++..++++++++++++++|||+ ..||.+|+++|+.+++|.+|....+. ...|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 58999999999999999999999999999 69999999999999999998766654 35899999999875
|
... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-15 Score=102.79 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=85.3
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc-ccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
...++||+.++|++|+ .+++++|+|++....++..+ +++++.. +|+.+++++++...||. |.+++++++.+|++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~ 117 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN 117 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence 4578999999999998 56999999999999999888 8888854 46999999999988986 89999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCEE
Q 026853 168 SLVIEDSVIGVVAGKAAGMEV 188 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~ 188 (232)
|++|||+.+|+.++.++|+..
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred EEEEECCHHHhhcCccCEEEe
Confidence 999999999999999999543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.5e-14 Score=112.78 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=80.8
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
..+..|++.+.+++++++|++++++|++....++..+ +++|+ ||.++++++....||+++. ..+.+.++ .+++
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~ 142 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGF 142 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCe
Confidence 4567899999999999999999999999999999888 88887 8999999887767666543 33445555 3568
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+++||+.+|+.+++.+| ..+.|+.+
T Consensus 143 ~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 143 DYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred eEecCCHHHHHHHHhCC-CeEEECCC
Confidence 99999999999999999 66788763
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-15 Score=115.73 Aligned_cols=90 Identities=22% Similarity=0.152 Sum_probs=81.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh----cCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~----~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
+++++.++|..|+++|+.++|+|++....+...+ ++ +++..+|+.+... .||++..+..+++++|+.+++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~ 105 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS 105 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence 4789999999999999999999999999999888 77 7888888887544 579999999999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCE
Q 026853 168 SLVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~ 187 (232)
++||||+..|+.++++++..
T Consensus 106 ~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 106 FLFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEEECCCHHHHHHHHHHCCC
Confidence 99999999999999997754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.9e-16 Score=105.51 Aligned_cols=101 Identities=18% Similarity=0.176 Sum_probs=85.4
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.+++|+++|++++|+||.....+...+ +++|+..+|+. .+|++..+.++++++++++++++||||+.||+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~ 105 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDW 105 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 799999999999999999999888888 88998877653 36889999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
.+++.+|+. +.+.... +..+..+++++.+..
T Consensus 106 ~~~~~ag~~-~~v~~~~--~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 106 PVMEKVGLS-VAVADAH--PLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHCCCe-EecCCcC--HHHHHhCCEEecCCC
Confidence 999999987 6665532 345666777776554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.4e-16 Score=112.49 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=70.0
Q ss_pred EEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEE
Q 026853 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 110 ~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i 189 (232)
+++++..........+ +..++...... ...+....+..+..+++.+++.+|++++++++|||+.||+.|++.+| +
T Consensus 110 ~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag---~ 184 (215)
T TIGR01487 110 VIMREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVG---F 184 (215)
T ss_pred EEecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCC---C
Confidence 3344554555555566 55554332221 11233456677888999999999999999999999999999999999 5
Q ss_pred EeCCCCCccccchhhhHhhhhcc
Q 026853 190 AVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 190 ~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
.+.+++..++.+..|++++.+..
T Consensus 185 ~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 185 KVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred eEEcCCccHHHHHhCCEEcCCCC
Confidence 56666668888888888886543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-13 Score=98.41 Aligned_cols=102 Identities=12% Similarity=0.052 Sum_probs=69.5
Q ss_pred cCCCCCcHHHHHH-HHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc----ccC----CCCCCHHHHHHHHH
Q 026853 89 KVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EVR----TGKPSPDIFLEAAK 159 (232)
Q Consensus 89 ~~~~~~~~~~~l~-~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~----~~~----~~kp~~~~~~~~~~ 159 (232)
...++|++.+.|+ .++++|++++|+|+.....++... +..++... +.++++. +.+ ...-..+-..++.+
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~ 169 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ 169 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence 3468999999996 778889999999999999888777 65444222 2333332 101 11111233444445
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.++.+.+.+.++|||.+|+.|...+|.+ ++|+.
T Consensus 170 ~~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vnp 202 (210)
T TIGR01545 170 KIGSPLKLYSGYSDSKQDNPLLAFCEHR-WRVSK 202 (210)
T ss_pred HhCCChhheEEecCCcccHHHHHhCCCc-EEECc
Confidence 5565667788999999999999999966 55554
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.8e-16 Score=115.86 Aligned_cols=66 Identities=9% Similarity=0.038 Sum_probs=56.9
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhH--hhhh
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE--VINS 210 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~~~ 210 (232)
+....+-.|..+++.+++.+|++++++++|||+.||++|.+.+| ..|++++..++.+..|++ ++.+
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag---~~vAm~Na~~~vK~~A~~~~v~~~ 248 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVG---RGFIMGNAMPQLRAELPHLPVIGH 248 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcC---CceeccCChHHHHHhCCCCeecCC
Confidence 44567778899999999999999999999999999999999999 677777778888888875 5544
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-15 Score=113.88 Aligned_cols=69 Identities=19% Similarity=0.118 Sum_probs=60.5
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+....+..|..+++.+++.+|++++++++|||+.||++|.+.+| +.|++++..++.+..|++++.+..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAG---VGVAMGNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCC---ceEEecCccHHHHHhcCeeccCCCc
Confidence 45567788899999999999999999999999999999999999 6677777888889999999876543
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-14 Score=107.93 Aligned_cols=75 Identities=13% Similarity=0.102 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHhc--------CC-----CCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccc-c--chhhhHh
Q 026853 145 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH-R--YTAADEV 207 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~--------~~-----~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~--~~~~~~~ 207 (232)
..+||++..|+.+++.+ +. ++++++||||+. +||.+|+++|+.+++|.+|..... . ...++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 35999999999988877 43 457999999999 999999999999999998733322 2 3458899
Q ss_pred hhhccCcCcccc
Q 026853 208 INSLLDLRPEKW 219 (232)
Q Consensus 208 ~~~l~el~~~l~ 219 (232)
++|+.|+...++
T Consensus 310 v~~l~e~~~~i~ 321 (321)
T TIGR01456 310 VNDVFDAVTKIL 321 (321)
T ss_pred ECCHHHHHHHhC
Confidence 999999877653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-13 Score=99.67 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=79.7
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccccee------ecccccCCCCCCH---------HH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DI 153 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~------~~~~~~~~~kp~~---------~~ 153 (232)
.+.+.||+.++++.|+++|++++|+|++....++..+ +++++...+..+ +..+....++|.| ..
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 5789999999999999999999999999999999999 878886555555 3334444556666 56
Q ss_pred HHHHHHhcC--CCCCcEEEEeCchhhhhhhhhc
Q 026853 154 FLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 154 ~~~~~~~~~--~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
++.+.+.++ .++++|++||||.+|+.||..+
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 667888888 8999999999999999998876
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.6e-13 Score=101.12 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=85.8
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc-C-------CccccceeecccccC---------------
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEVR--------------- 145 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-~-------l~~~~~~~~~~~~~~--------------- 145 (232)
.+...|++.++|+.|+++|++++|+||+....+...+ +++ + |..+||.++++...+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 3567999999999999999999999999999999888 764 6 899999988764211
Q ss_pred --CCCCC-------H-----HHHHHHHHhcCCCCCcEEEEeCch-hhhhhhh-hcCCEEEEeCC
Q 026853 146 --TGKPS-------P-----DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (232)
Q Consensus 146 --~~kp~-------~-----~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~-~~G~~~i~v~~ 193 (232)
..++. + .-.....+.++++++++++|||+. .|+..++ .+||.+++|..
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 01111 1 125678888999999999999999 8999998 99999999976
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=105.76 Aligned_cols=50 Identities=28% Similarity=0.513 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcE-EEEeCch-hhhhhhhhcCCEEEEeCCC
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~-~~vgD~~-~Di~~a~~~G~~~i~v~~~ 194 (232)
..+||++..++.+++++++.++++ +||||+. +||.+|+++|+.+++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 367999999999999999999887 9999999 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.6e-14 Score=114.29 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=78.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCch------------HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~------------~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
++|++.+.|+.|++.|++++|+||... ..+...+ +.+|+. |+.+++.......||++.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 689999999999999999999999765 3456666 777874 8888888777889999999999999
Q ss_pred hcC----CCCCcEEEEeCchhhhhhhhhcCC
Q 026853 160 RLN----MEPSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 160 ~~~----~~~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
+++ +++++++||||...|+.+++.+|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999988877666663
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.8e-14 Score=105.91 Aligned_cols=68 Identities=16% Similarity=0.081 Sum_probs=57.6
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhh--Hhhhhcc
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLL 212 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~~~l~ 212 (232)
+.+..+-.|..+++.+++.+|++++++++|||+.||++|.+.+| +.|++++..++.+..|+ +++.+..
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~~~v~~~n~ 252 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAG---KGCIMGNAHQRLKDLLPELEVIGSNA 252 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcC---CCeeecCCcHHHHHhCCCCeecccCc
Confidence 44556778899999999999999999999999999999999999 66777777888888876 6665543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.4e-15 Score=120.20 Aligned_cols=69 Identities=16% Similarity=0.086 Sum_probs=60.8
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+.+..+..|..+++.+++.+|++++++++|||+.||++|.+.+| +.|++++..++.+..|++++.+..|
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG---~gVAMgNA~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLAS---LGVALSNGAEKTKAVADVIGVSNDE 568 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCC---CEEEeCCCCHHHHHhCCEEeCCCCc
Confidence 44567788899999999999999999999999999999999999 6777778889999999998876543
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=92.39 Aligned_cols=95 Identities=24% Similarity=0.384 Sum_probs=83.7
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.....|.+++-+..++..|++++|+||+....+.... +.+|+.- + ....||.+..++++++++++++++|
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v~f----i-----~~A~KP~~~~fr~Al~~m~l~~~~v 113 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGVPF----I-----YRAKKPFGRAFRRALKEMNLPPEEV 113 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCCce----e-----ecccCccHHHHHHHHHHcCCChhHE
Confidence 3456788888999999999999999999988888777 7777633 2 2458999999999999999999999
Q ss_pred EEEeCch-hhhhhhhhcCCEEEEeCC
Q 026853 169 LVIEDSV-IGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 169 ~~vgD~~-~Di~~a~~~G~~~i~v~~ 193 (232)
+||||.. .|+.++..+|+.+|.|..
T Consensus 114 vmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 114 VMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred EEEcchhhhhhhcccccCcEEEEEEE
Confidence 9999999 899999999999999976
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.8e-13 Score=101.68 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=43.9
Q ss_pred cCCCCCCHHHHHHHHHhcCCCC-CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~-~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~ 201 (232)
...+ .+..+++++++.+|+++ +++++|||+.||+.|++.+|+. +.+++..++.+
T Consensus 186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~---vam~NA~~~~k 240 (273)
T PRK00192 186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIA---VVVPGPDGPNP 240 (273)
T ss_pred eCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCee---EEeCCCCCCCc
Confidence 3445 67889999999999999 9999999999999999999944 44444455544
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.6e-14 Score=95.59 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=72.8
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCC-chHHHHHHHhhhcCCc----------cccceeecccccCCCCCCHHHHHH
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLE 156 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~~l~----------~~~~~~~~~~~~~~~kp~~~~~~~ 156 (232)
..+.++|++..+|..|+..|+++++.|-. .++.+...| +.+++. .+|+..-.. .+ ++..-++.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~----~g-sK~~Hf~~ 115 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIY----PG-SKTTHFRR 115 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEES----SS--HHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhhee----cC-chHHHHHH
Confidence 45789999999999999999999999955 566777777 889998 677664222 22 66788999
Q ss_pred HHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc
Q 026853 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 198 (232)
Q Consensus 157 ~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~ 198 (232)
+.+..|++.++++||+|...++...+..|+.++.+.+|-...
T Consensus 116 i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~ 157 (169)
T PF12689_consen 116 IHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWD 157 (169)
T ss_dssp HHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HH
T ss_pred HHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHH
Confidence 999999999999999999999999999999999999865443
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.4e-14 Score=95.95 Aligned_cols=211 Identities=16% Similarity=0.190 Sum_probs=123.2
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcC-CCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHH---HHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EVYSM 82 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 82 (232)
+.++.+++|+-|||..+......+.. +++++. .+..-.......+... ......+.++|++.+.+++.. ...++
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~e-Al~rLr~~~~kVkFvTNttk~Sk-~~l~~rL~rlgf~v~eeei~tsl~aa~~~ 82 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVE-ALKRLRDQHVKVKFVTNTTKESK-RNLHERLQRLGFDVSEEEIFTSLPAARQY 82 (262)
T ss_pred cccceEEEeccceEecccccCCCHHH-HHHHHHhcCceEEEEecCcchhH-HHHHHHHHHhCCCccHHHhcCccHHHHHH
Confidence 46899999999999988655444333 333332 2222222223333333 333444567888877666543 22333
Q ss_pred HHhh--hccCCCCCcHHHHHHHHHhCCCCEEEEeCC-ch----HHHHHH---Hhhhc-------CCcccccee-------
Q 026853 83 FSDH--LCKVKALPGANRLIKHLSCHGVPMALASNS-HR----ATIESK---ISYQH-------GWNESFSVI------- 138 (232)
Q Consensus 83 ~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~----~~~~~~---l~~~~-------~l~~~~~~~------- 138 (232)
+.+. .....+.+++.+-+...... .+-+++-+- +. ..+.+. |.+.- |-..|+...
T Consensus 83 ~~~~~lrP~l~v~d~a~~dF~gidTs-~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgp 161 (262)
T KOG3040|consen 83 LEENQLRPYLIVDDDALEDFDGIDTS-DPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGP 161 (262)
T ss_pred HHhcCCCceEEEcccchhhCCCccCC-CCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCc
Confidence 3321 12233445555555544444 222222221 11 111111 10100 000111111
Q ss_pred ----------ecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcc----ccchh
Q 026853 139 ----------VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----HRYTA 203 (232)
Q Consensus 139 ----------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~----~~~~~ 203 (232)
...+....+||++..|+.++..+|++|++++||||.. .|+.+|+.+||..+.|.+|.-++ +....
T Consensus 162 G~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~ 241 (262)
T KOG3040|consen 162 GPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVP 241 (262)
T ss_pred hHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCC
Confidence 1112234789999999999999999999999999999 69999999999999999975444 22567
Q ss_pred hhHhhhhccCcCccccC
Q 026853 204 ADEVINSLLDLRPEKWG 220 (232)
Q Consensus 204 ~~~~~~~l~el~~~l~~ 220 (232)
|+.+.+++.|...++..
T Consensus 242 p~~~~d~f~~AVd~I~q 258 (262)
T KOG3040|consen 242 PDLTADNFADAVDLIIQ 258 (262)
T ss_pred cchhhhhHHHHHHHHHh
Confidence 88899999998887763
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-14 Score=100.59 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=86.8
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.++.|+++|++++|+|+.....+...+ +.+++..+|+ ..++++..+..+++++|+++++++||||+.+|+
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~---------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec---------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 567777899999999999999888888 8888877664 135678999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhh------hccCcCcccc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN------SLLDLRPEKW 219 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~------~l~el~~~l~ 219 (232)
.+++.+|+.+ .+. +..+.....+++++. .+.|+.+.++
T Consensus 126 ~~a~~aG~~~-~v~--~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 126 PVMEKVGLSV-AVA--DAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHHHHCCCeE-ecC--ChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 9999999984 343 233343566777775 5777766654
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.6e-13 Score=93.39 Aligned_cols=136 Identities=13% Similarity=0.206 Sum_probs=103.2
Q ss_pred HHHHHHHHHcCCCccHHhHHHHHHHHHHhhhccC---------CCCCcHHHHHHHHHhCCCCEEEEeCCchH--------
Q 026853 57 EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV---------KALPGANRLIKHLSCHGVPMALASNSHRA-------- 119 (232)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~l~~~g~~~~i~s~~~~~-------- 119 (232)
..+-..+++.|+..-.-++...+.......+... .+.|+++.++..|++.|++++|||-++..
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~ 111 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRP 111 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCc
Confidence 4455566777777555555555555333333222 26788999999999999999999987664
Q ss_pred -------HHHHHHhhhcCCccccceeecccc-----------cCCCCCCHHH--H--HHHHHhcCCCCCcEEEEeCchhh
Q 026853 120 -------TIESKISYQHGWNESFSVIVGSDE-----------VRTGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIG 177 (232)
Q Consensus 120 -------~~~~~l~~~~~l~~~~~~~~~~~~-----------~~~~kp~~~~--~--~~~~~~~~~~~~~~~~vgD~~~D 177 (232)
.++..| +..+....+..+++... ++..||+|+. | ++++++.|+.|++++||+|+..+
T Consensus 112 ~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~N 190 (219)
T PTZ00445 112 RYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNN 190 (219)
T ss_pred ceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHH
Confidence 355566 65566666666654432 3677999999 8 99999999999999999999999
Q ss_pred hhhhhhcCCEEEEeCC
Q 026853 178 VVAGKAAGMEVVAVPS 193 (232)
Q Consensus 178 i~~a~~~G~~~i~v~~ 193 (232)
+.+|+++|+.++.+..
T Consensus 191 VeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 191 CKNALKEGYIALHVTG 206 (219)
T ss_pred HHHHHHCCCEEEEcCC
Confidence 9999999999999976
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.5e-13 Score=98.78 Aligned_cols=76 Identities=26% Similarity=0.341 Sum_probs=65.6
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcc--------ccchhhhHhhhhccCc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT--------HRYTAADEVINSLLDL 214 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~--------~~~~~~~~~~~~l~el 214 (232)
.-.+||++.++..+++++++.|++++||||+. .||..++++|+++++|-+|-... +.+..|||.++++.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 44789999999999999999999999999999 79999999999999999975432 2245689999999998
Q ss_pred Ccccc
Q 026853 215 RPEKW 219 (232)
Q Consensus 215 ~~~l~ 219 (232)
.+.+.
T Consensus 300 ~~~~~ 304 (306)
T KOG2882|consen 300 LPLLN 304 (306)
T ss_pred hhhcc
Confidence 77654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-13 Score=102.42 Aligned_cols=46 Identities=4% Similarity=-0.111 Sum_probs=41.6
Q ss_pred cccCCCCCCHHHHHHHHHhcCC---CCCcEEEEeCchhhhhhhhhcCCE
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~---~~~~~~~vgD~~~Di~~a~~~G~~ 187 (232)
+.+..+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~g 228 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYA 228 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEE
Confidence 4456778889999999999999 999999999999999999999944
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=96.96 Aligned_cols=61 Identities=11% Similarity=-0.087 Sum_probs=51.5
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhh
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~ 205 (232)
+....+.+|+.+++.++++++++++++++|||+.||+.|++.+|.. +.+++..++.+..++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~---iav~na~~~~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG---VVVGNHDPELEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE---EEEcCCcHHHHHhhc
Confidence 4566788999999999999999999999999999999999999944 445556777777777
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.6e-12 Score=88.24 Aligned_cols=123 Identities=24% Similarity=0.307 Sum_probs=93.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCc---------------hHHHHHHHhhhcCCccccceeecc-----cccCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~~~l~~~~~~~~~~-----~~~~~~kp 149 (232)
..+.|++.+.+..|++.|++++++||.. ...+...| +..|. .|+.++.. +.+..+||
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcccCC
Confidence 4688999999999999999999999952 12233333 33343 56666544 23568999
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhhhhccCcC
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~~l~el~ 215 (232)
++..++.+++++++++++.++|||...|+++|.++|+..+.+.++...... ....+++.+++.++.
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 999999999999999999999999999999999999998888885333222 225566666666665
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=92.08 Aligned_cols=87 Identities=18% Similarity=0.284 Sum_probs=62.3
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccc-------cCCCC--CCHHHHHHH---HH
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDE-------VRTGK--PSPDIFLEA---AK 159 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~-------~~~~k--p~~~~~~~~---~~ 159 (232)
+++.++++.+++.|++++|+|++....+...+ +.+++.... ..-+.... ..... -+...++.+ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhh
Confidence 56669999999999999999999999998888 788876521 21110000 00000 245566666 44
Q ss_pred hcCCCCCcEEEEeCchhhhhhhh
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGK 182 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~ 182 (232)
. +.....+++||||.+|+.|++
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 4 888999999999999999986
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.4e-13 Score=100.57 Aligned_cols=68 Identities=18% Similarity=0.116 Sum_probs=55.6
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+..|..+++.+++.++++++++++|||+.||+.|++.+|+. +.+++..+..+..|++++.+..+
T Consensus 182 I~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~---~a~~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 182 ITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYG---VAMGNADEELKALADYVTDSNNE 249 (256)
T ss_pred ecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCce---eEecCchHHHHHhCCEEecCCCC
Confidence 445677889999999999999999999999999999999999965 34445566667788888766443
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.9e-13 Score=98.50 Aligned_cols=99 Identities=23% Similarity=0.389 Sum_probs=81.0
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccccee--ecccccCCCCCCHHHHHHHHHhcCCC-CCcEE
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL 169 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~--~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~~ 169 (232)
++++.++++.+.++|+++ ++||.+.......+ ...+...++..+ .+.+....+||+|..++.++++++.. +++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 578888999998889987 88998877665455 666666666644 45556668999999999999999975 57899
Q ss_pred EEeCch-hhhhhhhhcCCEEEEeCC
Q 026853 170 VIEDSV-IGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 170 ~vgD~~-~Di~~a~~~G~~~i~v~~ 193 (232)
||||+. +|+.+|+++|+.+++|.+
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEeC
Confidence 999995 999999999999999853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=85.74 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=108.6
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC-CChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (232)
+-.+++||+|-|+++.+.. .++. ..++...-...++.... ..+.+.+.+++++++-. ...++ ..+
T Consensus 12 ~ril~~FDFD~TIid~dSD--~wVv---~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~--------ik~ 78 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD--NWVV---DELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAE--------IKQ 78 (256)
T ss_pred CcEEEEEecCceeecCCcc--hHHH---HhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHH--------HHH
Confidence 4578999999999976431 1222 22332222222222222 22344555555555422 12222 233
Q ss_pred hhccCCCCCcHHHHHHHHHhCCC-CEEEEeCCchHHHHHHHhhhcCCccccceeeccccc------------C-------
Q 026853 86 HLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV------------R------- 145 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~------------~------- 145 (232)
.+..++..||+.++++.+++.|. .+.|+|+.....++..| +.+++...|+.+++.... .
T Consensus 79 ~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 79 VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCc
Confidence 34568999999999999999985 99999999999999999 999999988877653211 0
Q ss_pred --CCCCCHHHHHHHHH---hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 146 --TGKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 146 --~~kp~~~~~~~~~~---~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
..-.++..+.+... +-|+..++.+|+||+.||+.........-+...+
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 11123344444332 2368888999999999999987665544444444
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-12 Score=94.80 Aligned_cols=46 Identities=13% Similarity=-0.005 Sum_probs=40.1
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEE
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i 189 (232)
...+..++.+++.+++.+|++++++++|||+.||+.|++.+|..++
T Consensus 174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3445557789999999999999999999999999999999997644
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-13 Score=101.98 Aligned_cols=67 Identities=19% Similarity=0.113 Sum_probs=57.3
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
...+-.+..+++.+++.+|++++++++|||+.||+.|++.+| ..+.+++..+..+..|++++.+-.+
T Consensus 181 ~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~---~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 181 TPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAG---YSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSS---EEEEETTS-HHHHHHSSEEESSGTC
T ss_pred eeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcC---eEEEEcCCCHHHHHhCCEEecCCCC
Confidence 346677889999999999999999999999999999999999 6666667788888899888877665
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.6e-12 Score=92.39 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=75.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHH--HHHhhhcCCcc-ccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~--~~l~~~~~l~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.++||+.++|++|+++|++++++||..+.... ..+ +++|+.. .|+.++++..... ..+..++++++.++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~ 97 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGI 97 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCce
Confidence 47899999999999999999999999876654 667 8899987 8999998875432 4666777888899999
Q ss_pred EEEEeCchhhhhhhhhcCC
Q 026853 168 SLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~ 186 (232)
+++|||+..|+.....+|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999999888766664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-10 Score=85.66 Aligned_cols=85 Identities=13% Similarity=0.188 Sum_probs=65.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCcccc-ceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
...++||+.++++.|+++|++++++||..... ....+ +.+|+...+ +.++..+. .++++.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE-
Confidence 45789999999999999999999999987433 44666 778887643 55555432 34566777777787777
Q ss_pred CCcEEEEeCchhhhhhh
Q 026853 165 PSSSLVIEDSVIGVVAG 181 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a 181 (232)
+++|||..+|+..+
T Consensus 191 ---vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ---VLLFGDNLLDFDDF 204 (266)
T ss_pred ---EEEECCCHHHhhhh
Confidence 89999999999653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-11 Score=83.04 Aligned_cols=94 Identities=20% Similarity=0.318 Sum_probs=66.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCc---h-----------HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~---~-----------~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~ 157 (232)
..+++.+.|++|.+.|+.++|+||.. . ..+...+ +.+++. +....+...-..+||.+.++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 45689999999999999999999872 2 1123333 445554 33334444447899999999999
Q ss_pred HHhcC----CCCCcEEEEeCc-----------hhhhhhhhhcCCEE
Q 026853 158 AKRLN----MEPSSSLVIEDS-----------VIGVVAGKAAGMEV 188 (232)
Q Consensus 158 ~~~~~----~~~~~~~~vgD~-----------~~Di~~a~~~G~~~ 188 (232)
++.++ ++.++.+||||. ..|..-|.++|++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 99987 488999999996 57899999999764
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-12 Score=94.88 Aligned_cols=66 Identities=9% Similarity=-0.068 Sum_probs=50.9
Q ss_pred cccCCCCCCHHHHHHHHHhcCCC--CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc---cccchh--h-hHhhhh
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---THRYTA--A-DEVINS 210 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~--~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~---~~~~~~--~-~~~~~~ 210 (232)
+....+..+..+++++++.++++ .+++++|||+.||+.|++.+| +.|.+++.. ++.+.. + ++++.+
T Consensus 169 ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag---~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 169 HVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVD---LAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred EEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCC---EEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 34456778889999999999999 999999999999999999999 455554444 345554 3 366654
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.8e-10 Score=85.97 Aligned_cols=52 Identities=25% Similarity=0.243 Sum_probs=45.1
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
+....+.+++.+++.+++.++++++++++|||+.||+.|++.+|..++.+.+
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 4566788999999999999999999999999999999999996655566644
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-11 Score=101.96 Aligned_cols=115 Identities=21% Similarity=0.232 Sum_probs=89.5
Q ss_pred cCCCCCcHHHHHHHHHhCCC-CEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 89 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
..+++||+.+.+++|++.|+ +++++|+.....+...+ +++|+..+|..+. +.++ ..++++++...++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~ 427 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL-------PEDK----LEIVKELREKYGP 427 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC-------cHHH----HHHHHHHHhcCCE
Confidence 34688999999999999999 99999999999999888 8899987765432 1222 4455666666689
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCCC-CCccccchhhhHhh--hhccCcCccc
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVI--NSLLDLRPEK 218 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~--~~l~el~~~l 218 (232)
++||||+.||+.+++.+| +.+.+| +.....+..+|.++ ++++++...+
T Consensus 428 v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 428 VAMVGDGINDAPALAAAD---VGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEEeCCHHHHHHHHhCC---EEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 999999999999999999 566665 33344466788887 7888876543
|
. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=79.27 Aligned_cols=92 Identities=24% Similarity=0.228 Sum_probs=63.1
Q ss_pred CCCcHHHHHHHHHhCCC--CEEEEeCCc-------hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 92 ALPGANRLIKHLSCHGV--PMALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~--~~~i~s~~~-------~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+.|.+.+.++++++.+. .++|+||+. ...++ .+++.+|+.-. . ....|| ..+.++++.++
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~-~~~~~lgIpvl----~----h~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAE-ALEKALGIPVL----R----HRAKKP--GCFREILKYFK 128 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHH-HHHHhhCCcEE----E----eCCCCC--ccHHHHHHHHh
Confidence 33444556666667654 499999983 33343 33366664321 1 113555 55666666665
Q ss_pred C-----CCCcEEEEeCch-hhhhhhhhcCCEEEEeCCC
Q 026853 163 M-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 163 ~-----~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~ 194 (232)
. .|+++++|||-. .|+-++..+|+.+|++..|
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 3 599999999999 9999999999999999875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-11 Score=101.89 Aligned_cols=113 Identities=21% Similarity=0.225 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHHHhCC-CCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 90 VKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.+++||+.+.+++|++.| ++++++|+.....+...+ +++|+..+|+.+. +.++ ..++++++..++++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~~-------p~~K----~~~v~~l~~~~~~v 450 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAELL-------PEDK----LAIVKELQEEGGVV 450 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccCC-------HHHH----HHHHHHHHHcCCEE
Confidence 468999999999999999 999999999999999888 9999977766431 1122 23455555567899
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh--hccCcCcc
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRPE 217 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~l~el~~~ 217 (232)
+||||+.||+.+++.+| +++.+|+..+..+..+|+++. +++.+...
T Consensus 451 ~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 451 AMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLNDDLSSLPTA 498 (556)
T ss_pred EEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 99999999999999999 666666433334566777775 55555444
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.8e-10 Score=75.58 Aligned_cols=161 Identities=17% Similarity=0.159 Sum_probs=96.8
Q ss_pred EEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhc--CCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhc
Q 026853 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV--GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (232)
Q Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (232)
.|+.|+|||+.-.+ ....+-..++.+.........+ ..+..+.+.+++...+.+ .++....+ ..
T Consensus 5 vi~sDFDGTITl~D-----s~~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s--~~Eile~l-------lk 70 (220)
T COG4359 5 VIFSDFDGTITLND-----SNDYITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSS--LEEILEFL-------LK 70 (220)
T ss_pred EEEecCCCceEecc-----hhHHHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCC--HHHHHHHH-------Hh
Confidence 46779999998332 1222223444322111111111 123445566666665544 23333322 23
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce-----------------eecccccCCCCCCH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-----------------IVGSDEVRTGKPSP 151 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~-----------------~~~~~~~~~~kp~~ 151 (232)
.+.+.||.++++++.++++++++++|++....+...+ +.+.-...++. +...++-..+..++
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lf-e~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLF-EGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHH-HhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 4789999999999999999999999999999998888 55442211111 11112222233333
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
..++.+.-+++.++|.|||.+|+.+|+... ..++.
T Consensus 150 ----~vI~~l~e~~e~~fy~GDsvsDlsaaklsD---llFAK 184 (220)
T COG4359 150 ----SVIHELSEPNESIFYCGDSVSDLSAAKLSD---LLFAK 184 (220)
T ss_pred ----hhHHHhhcCCceEEEecCCcccccHhhhhh---hHhhH
Confidence 344555566777999999999999999988 44444
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.7e-11 Score=85.01 Aligned_cols=173 Identities=16% Similarity=0.278 Sum_probs=93.5
Q ss_pred cE-EEEeCCCcccccHHHHHHHHHHHHHHcCCC--CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH--
Q 026853 10 SC-VILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS-- 84 (232)
Q Consensus 10 k~-i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (232)
++ |++|+||||.|..+.+.+... +.++.. .+.+.. .+.... +.++.. ..+....+...+.
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n---~~~~~~~~~~~~~~---~~~~~~-------~~~g~~--~~e~~~~~~~~~~~~ 66 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFN---EEFGKNPELTPEDI---TGYWDW-------EKWGIT--EPEFYEKLWRFYEEP 66 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHH---HHTTTS----GGGG---TSSSHH-------HHHHHH--STTHHHHHHHHHTST
T ss_pred CcEEEEECCCCCcccHHHHHHHHH---HHcCCCCCCCHHHh---hhhhHH-------HHhCCC--CHHHHHHHHHHHhCh
Confidence 45 899999999998665444444 455554 333332 111111 111111 1122333333332
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchH-------HHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~-------~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~ 157 (232)
..+...++.||+.+.+++|.+.|..++++|..+.. ....-+.++++...+-+.+++. . |.
T Consensus 67 ~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~-~----K~-------- 133 (191)
T PF06941_consen 67 GFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG-D----KT-------- 133 (191)
T ss_dssp TTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES-S----GG--------
T ss_pred hhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec-C----CC--------
Confidence 23567899999999999999999778888777543 2222343444432222333332 1 11
Q ss_pred HHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
.++.+ ++|+|++.++..+...|+.++++..++++... ....+.+.+|+...+.
T Consensus 134 --~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 134 --LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIEDLIL 186 (191)
T ss_dssp --GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHHHHH
T ss_pred --eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHHHHH
Confidence 12222 89999999999999999999999986665544 5566678888766653
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=85.54 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=53.7
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHH
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~ 152 (232)
.|++.++|++|+++|++++|+|++.+..+...+ +.+|+..+|+.++++++....||+++
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcc
Confidence 489999999999999999999999999999888 99999999999999988887777664
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-10 Score=85.25 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHHHhcCC--CCCcEEEEeCchhhhhhhhhcCCEEE
Q 026853 146 TGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~--~~~~~~~vgD~~~Di~~a~~~G~~~i 189 (232)
.+-.++.+++.+++.+++ ++.++++|||+.||+.|++.+|+.++
T Consensus 178 ~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 178 GGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 356667888899888876 67789999999999999999997643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.11 E-value=9e-10 Score=87.54 Aligned_cols=61 Identities=20% Similarity=0.071 Sum_probs=47.5
Q ss_pred cccCCCCCCHHHHHHHHHhc---CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhh
Q 026853 142 DEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA 204 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~ 204 (232)
+.+..+-.|..+++.+++++ |++++++++|||+.||++|.+.+|...+.+ ++..++.+..+
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam--~NA~~elk~~a 231 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV--SNAQEELLQWY 231 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE--cCCcHHHHHHH
Confidence 34556777889999999999 999999999999999999999999433333 44555555443
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.3e-11 Score=82.57 Aligned_cols=100 Identities=8% Similarity=0.055 Sum_probs=86.7
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc-ccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.+...||+.++|++|++. +.++|+|++....+...+ +.++... +|+.+++.+.....+++ +.+.+..+|.++++
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK 114 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence 457899999999999988 999999999999999998 8888765 88988888877666655 66778889999999
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
+++|||++.++.++...|+.+..+..
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCCC
Confidence 99999999999999999977666664
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-10 Score=96.38 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=81.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
.+++|++.+++++|++.|++++++|+.....++... +++|+. +|.. . .++++. ..+++++.++++++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-~~~~-----~--~p~~K~----~~v~~l~~~~~~v~ 470 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-VRAE-----V--LPDDKA----ALIKELQEKGRVVA 470 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-EEcc-----C--ChHHHH----HHHHHHHHcCCEEE
Confidence 468899999999999999999999999999998888 888984 2211 1 122333 34444444678999
Q ss_pred EEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCcc
Q 026853 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~~ 217 (232)
||||+.||+.+++.+|+ .+.++...+.....+|+++ ++++++...
T Consensus 471 ~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~~~~l~~l~~~ 517 (562)
T TIGR01511 471 MVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLMRNDLNDVATA 517 (562)
T ss_pred EEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEeCCCHHHHHHH
Confidence 99999999999999994 5555543333356677776 366655544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-10 Score=99.54 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=96.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCC----------------CCCCHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----------------GKPSPDIF 154 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~----------------~kp~~~~~ 154 (232)
++.|++++.++.|++.|+++.++|+.....+.... +..|+....+.++++.+... ....|+.-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 67899999999999999999999999999998887 88999876666655543322 23566666
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhh--hhccCcCccc
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVI--NSLLDLRPEK 218 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l 218 (232)
..+.+.++...+.+.|+||+.||..+++.|+ +++++|....+. +..||+++ ++++.+...+
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~Ad---VGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLAD---IGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCC---eeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 7777777777788999999999999999999 677776433333 56778877 5577766543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=69.46 Aligned_cols=121 Identities=12% Similarity=0.136 Sum_probs=98.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
-.+++.+.+.+.+|++. ..++|.|+.......... +..|++. +.++. -.+++.-..+++.|+-+.+.++
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~~--~rv~a-------~a~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIPV--ERVFA-------GADPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCce--eeeec-------ccCHHHHHHHHHHhcCCCcEEE
Confidence 46789999999999999 999999999988888777 7777532 33332 2345777888999998889999
Q ss_pred EEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCC
Q 026853 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~ 221 (232)
||||+.||+.+.+++.....-+..++...+....||.+++++.|+++.+...
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 9999999999999999776666666666666788999999999998887643
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-10 Score=75.13 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=79.7
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
-++.|.+.|++++|+|+.....++... +.+|+...|..+ +.+..+++++++++++.++++.|+||..+|+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRA-KDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 366788889999999999999999998 889987655432 2356799999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhh
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 209 (232)
...+.+|.++... ...+..+..+++++.
T Consensus 113 pvm~~vGls~a~~---dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 113 PVMEKVGLSVAVA---DAHPLLKQRADYVTS 140 (170)
T ss_pred HHHHHcCCccccc---ccCHHHHHhhHhhhh
Confidence 9999999664333 345666777777764
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=77.69 Aligned_cols=47 Identities=21% Similarity=0.138 Sum_probs=42.5
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEE
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i 189 (232)
....+.+++.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 157 v~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 157 VLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 45578889999999999999999999999999999999999997644
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-08 Score=76.19 Aligned_cols=50 Identities=20% Similarity=0.142 Sum_probs=39.6
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.++..-.|..+++.+++++++++++++++|||.||+.|+ ..+...|.|.+
T Consensus 159 ilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 159 ILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp EEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred EccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 345666788999999999999999999999999999999 56667787766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-09 Score=93.35 Aligned_cols=113 Identities=16% Similarity=0.152 Sum_probs=84.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
+++|++.+.+++|++.|++++++|+.......... +++|+...+..+. |+...+++++++..+++++|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~~~~~~-----------p~~K~~~i~~l~~~~~~v~~ 717 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEVIAGVL-----------PDGKAEAIKRLQSQGRQVAM 717 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEEEeCCC-----------HHHHHHHHHHHhhcCCEEEE
Confidence 57899999999999999999999999999888887 8899876554321 23345577777778889999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhh--HhhhhccCcCccc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLLDLRPEK 218 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~~~l~el~~~l 218 (232)
|||+.||+.+++.+|+ ++.+|+........+| ...++++++...+
T Consensus 718 vGDg~nD~~al~~Agv---gia~g~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 718 VGDGINDAPALAQADV---GIAMGGGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred EeCCHHHHHHHHhCCe---eEEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 9999999999999995 5666544444444444 3335565555443
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=6e-08 Score=68.66 Aligned_cols=122 Identities=16% Similarity=0.063 Sum_probs=87.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcC---CccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~---l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
...++++...++..+..|++++|.|.+....+.... .+.+ +..+++..+- ..--.|-....|..+.+.+|.++.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfD--t~iG~K~e~~sy~~I~~~Ig~s~~ 198 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFD--TTIGLKVESQSYKKIGHLIGKSPR 198 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhh--ccccceehhHHHHHHHHHhCCChh
Confidence 468899999999999999999999999877655443 3332 3333333321 112245566789999999999999
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCc
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL 214 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el 214 (232)
+++|.-|......+|+.+|+.+..+.++.+.... .....-++.+++.+
T Consensus 199 eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 199 EILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred heEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 9999999999999999999999999884333222 22224444555444
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=76.28 Aligned_cols=85 Identities=15% Similarity=0.178 Sum_probs=66.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCC--------------------------
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT-------------------------- 146 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~-------------------------- 146 (232)
.|++.++|++|++.|++++|+|++....+...+ +.+|+..+|+.+++++....
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 388899999999999999999999999999888 99999999998887754321
Q ss_pred ---CCC-CHHHHHHHHHhcCCCCCc-EEEEeCch-hhh
Q 026853 147 ---GKP-SPDIFLEAAKRLNMEPSS-SLVIEDSV-IGV 178 (232)
Q Consensus 147 ---~kp-~~~~~~~~~~~~~~~~~~-~~~vgD~~-~Di 178 (232)
.-| .|..+...+++.|+..-. +..|+|-. ||+
T Consensus 229 ~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 229 DVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 112 356778888888887755 44677776 665
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.3e-08 Score=76.88 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=70.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc---------CCccccceeeccccc----------------
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---------GWNESFSVIVGSDEV---------------- 144 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---------~l~~~~~~~~~~~~~---------------- 144 (232)
+...|.+..+|+.|++.|.++.++||+....+...+ .++ .|..+||.|++....
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M-~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~ 260 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVM-SYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTE 260 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHH-HHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhh-hhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECC
Confidence 345789999999999999999999999988887766 332 478899999875310
Q ss_pred -CC---CC------C----CHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhc-CCEEEEeCC
Q 026853 145 -RT---GK------P----SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPS 193 (232)
Q Consensus 145 -~~---~k------p----~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~-G~~~i~v~~ 193 (232)
+. .+ + ...-...+.+.+|....+|++|||+. .||...+.. ||.|++|..
T Consensus 261 ~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 261 TGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp TSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 10 00 0 01235677888999999999999999 899887776 999999976
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.6e-10 Score=83.17 Aligned_cols=48 Identities=8% Similarity=-0.131 Sum_probs=41.0
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeC----chhhhhhhhhcCCEEEEeCC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~~G~~~i~v~~ 193 (232)
+....+-.|..+++.+++. ++++++||| +.||++|.+.++..++.|++
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 4456677888999999988 599999999 88999999988877788874
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=84.54 Aligned_cols=45 Identities=7% Similarity=-0.014 Sum_probs=40.0
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEE--eCchhhhhhhhhcCCEEEE
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVA 190 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~v--gD~~~Di~~a~~~G~~~i~ 190 (232)
.+..|..+++.+++.+++..++++.| ||+.||+.|.+.+|..+++
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 46678899999999999999999999 9999999999999976444
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.4e-08 Score=65.21 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=68.2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH------hcC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK------RLN 162 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~------~~~ 162 (232)
.+.++|.+++++.+++..|+.+..+|=+....+-..| ..+++..+|+.++.-..-.+. .++.++++ ...
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~ViePhP~K~----~ML~~llr~i~~er~~~ 113 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVIEPHPYKF----LMLSQLLREINTERNQK 113 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEecCCChhH----HHHHHHHHHHHHhhccc
Confidence 4679999999999999999999999988888888888 889999999987643221111 23334443 345
Q ss_pred CCCCcEEEEeCchhhhhhhhh
Q 026853 163 MEPSSSLVIEDSVIGVVAGKA 183 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~ 183 (232)
+.|+++++++|..-.+.-..+
T Consensus 114 ikP~~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 114 IKPSEIVYLDDRRIHFGNIWE 134 (164)
T ss_pred cCcceEEEEecccccHHHHHH
Confidence 899999999999865555544
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.8e-09 Score=78.05 Aligned_cols=69 Identities=12% Similarity=0.048 Sum_probs=49.9
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc----CCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA----GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~----G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
...+..|..+++++++.+++..+++++|||+.||+.|.+.+ | .++.|.. .. ..|.+.+++..++..+|.
T Consensus 169 ~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g-~~vavg~--a~----~~A~~~l~~~~~v~~~L~ 241 (266)
T PRK10187 169 KPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGG-ISVKVGT--GA----TQASWRLAGVPDVWSWLE 241 (266)
T ss_pred eCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCC-eEEEECC--CC----CcCeEeCCCHHHHHHHHH
Confidence 34556788999999999999999999999999999999998 5 3344433 22 224555555555555444
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.3e-07 Score=65.87 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=64.2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHH-HhcCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA-KRLNME 164 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~-~~~~~~ 164 (232)
..++.|++.++++.++++|+.++++|+..... +...| ...|+..+ +.++-...-...++ ...|+.-. +++--+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~-~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKT-VVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCch-HhHHHHHHHHHHHhC
Confidence 45899999999999999999999999998665 55666 66787654 55554432222322 12222222 122212
Q ss_pred CCc-EEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 165 ~~~-~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.-+ +..|||..+|+.+. .+|.+++..++
T Consensus 195 GYrIv~~iGDq~sDl~G~-~~~~RtFKLPN 223 (229)
T TIGR01675 195 GYRIWGNIGDQWSDLLGS-PPGRRTFKLPN 223 (229)
T ss_pred CceEEEEECCChHHhcCC-CccCceeeCCC
Confidence 223 45799999999764 46656665544
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-08 Score=86.23 Aligned_cols=110 Identities=17% Similarity=0.161 Sum_probs=77.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++.+.+++|++.|++++++|+.......... +.+|+..+++ . . |+--..++++++ .++.|+|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~~------~----~--p~~K~~~v~~l~-~~~~v~m 633 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRAG------L----L--PEDKVKAVTELN-QHAPLAM 633 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeecC------C----C--HHHHHHHHHHHh-cCCCEEE
Confidence 68899999999999999999999999999988888 8899853221 1 1 222233444554 2468999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCcc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~~ 217 (232)
|||+.||..+++.++ +++.+++........+|.+. +++.++...
T Consensus 634 vGDgiNDapAl~~A~---vgia~g~~~~~a~~~adivl~~~~l~~l~~~ 679 (741)
T PRK11033 634 VGDGINDAPAMKAAS---IGIAMGSGTDVALETADAALTHNRLRGLAQM 679 (741)
T ss_pred EECCHHhHHHHHhCC---eeEEecCCCHHHHHhCCEEEecCCHHHHHHH
Confidence 999999999999999 66666543333344455443 455555433
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-08 Score=88.66 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=88.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc----ceeeccccc----------------CCCCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKPS 150 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~----~~~~~~~~~----------------~~~kp~ 150 (232)
++.+++.+.++.|++.|+++.++|+.....+.... +..|+...- ...+.+.+. -.....
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 57899999999999999999999999888887777 888875311 112222111 112233
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhh--ccCcCccc
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLRPEK 218 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--l~el~~~l 218 (232)
|+.-.++.+.++-..+.+.|+||+.||+.|++.|+ +++.+++..+..+..+|+++.+ ++.+...+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~Ad---VGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKAD---IGIAMGSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCC---eeEECCCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 45556677777766778889999999999999999 5666654444446678888866 66665543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.3e-07 Score=64.00 Aligned_cols=92 Identities=14% Similarity=0.202 Sum_probs=58.4
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHH---HHHhhh-----cCCccccceeeccccc---------CCCCC---CHH
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEV---------RTGKP---SPD 152 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~-----~~l~~~~~~~~~~~~~---------~~~kp---~~~ 152 (232)
.|++.+++++++++|++++++|+++..... ..+ .. .++.. ..++++... -..+| +..
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 588999999999999999999999877764 445 33 22321 233333221 12233 233
Q ss_pred HHHHHHHhcCCCCCcE-EEEeCchhhhhhhhhcCCE
Q 026853 153 IFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~-~~vgD~~~Di~~a~~~G~~ 187 (232)
.++.+.+.+.-..-.. ..|||+.+|+.+-+++|+.
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 4455554443222233 4589889999999999985
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=64.00 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=66.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.|-+-+++++.-..++|-.++.+|+...-. +...|.+.+.+..-.-.++.++- .||...--...+...++.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~~--- 187 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNIR--- 187 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCce---
Confidence 345567888999999999999999986544 34455455666443333333322 233322334455666664
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++.|||.+||.+|+++|.+.|-+.+
T Consensus 188 -IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 188 -IHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred -EEecCCchhhhHHHhcCccceeEEe
Confidence 9999999999999999999998887
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.1e-07 Score=68.58 Aligned_cols=46 Identities=20% Similarity=0.116 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHhcCCC--CCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 147 GKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~--~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
..++..+++.+.+.++-. +-.++.+|||+||+.|.+.+.+.++ |.+
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vv-i~~ 253 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVV-LPS 253 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEE-ecC
Confidence 446677888887776643 4479999999999999999997744 444
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.5e-06 Score=69.40 Aligned_cols=96 Identities=15% Similarity=0.024 Sum_probs=56.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--------ceeecccccCCCCCC-HHHHHHHHHhcC
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--------SVIVGSDEVRTGKPS-PDIFLEAAKRLN 162 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--------~~~~~~~~~~~~kp~-~~~~~~~~~~~~ 162 (232)
+.+.+.+ .++++|. .+++|.++...++...++.+|++..+ +..+++...+..-.. .+-..++.+.++
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 4454444 4455664 49999999999988873446765331 222222221111111 123333445566
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.+... +++|||.+|..+...|+-. +.|+.
T Consensus 187 ~~~~~-~aYgDS~sD~plL~~a~e~-y~V~~ 215 (497)
T PLN02177 187 DALPD-LGLGDRETDHDFMSICKEG-YMVPR 215 (497)
T ss_pred CCCce-EEEECCccHHHHHHhCCcc-EEeCC
Confidence 54444 8999999999999999955 55544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.9e-07 Score=68.44 Aligned_cols=89 Identities=19% Similarity=0.233 Sum_probs=57.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchH---HHHHHHhhhcCCccccceeecccccCCC---CC-CHHHHHHHHHh-cC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTG---KP-SPDIFLEAAKR-LN 162 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~~l~~~~~~~~~~~~~~~~---kp-~~~~~~~~~~~-~~ 162 (232)
++.|++.++++.++++|..|+++|+.... .....| ...|...+-..++........ .. +......+.+. +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 78899999999999999999999999654 345556 666765443333333222111 11 22333333344 33
Q ss_pred CCCCcEEEEeCchhhhhhhhhc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
+ +++|||..+|+..++..
T Consensus 194 I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 194 I----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp E----EEEEESSGGGCHCTHHH
T ss_pred E----EEEeCCCHHHhhccccc
Confidence 3 67899999999995544
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-07 Score=79.44 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=74.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++++.+++|++.|+++.++|+.....+.... +.+|+.+.+.. -.|+--....+.++-....+.|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~~v~a~-----------~~PedK~~~v~~lq~~g~~Vam 513 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVDDFIAE-----------ATPEDKIALIRQEQAEGKLVAM 513 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCEEEcC-----------CCHHHHHHHHHHHHHcCCeEEE
Confidence 67899999999999999999999999999888777 88898653321 1234334444444444557999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHh
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 207 (232)
+||+.||..+.+.++ ++++++......+..++++
T Consensus 514 vGDG~NDapAL~~Ad---vGiAm~~gt~~akeaadiv 547 (675)
T TIGR01497 514 TGDGTNDAPALAQAD---VGVAMNSGTQAAKEAANMV 547 (675)
T ss_pred ECCCcchHHHHHhCC---EeEEeCCCCHHHHHhCCEE
Confidence 999999999999999 5566543333334455544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.6e-08 Score=74.05 Aligned_cols=47 Identities=11% Similarity=-0.136 Sum_probs=40.3
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeC----chhhhhhhhhcCCEEEEeCC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~~G~~~i~v~~ 193 (232)
+.+..+-.|..+++.++ +++++++||| +.||++|.+.-|+.++-|.+
T Consensus 182 Di~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 182 DVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 44566777777888777 8999999999 79999999999999999977
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.7e-06 Score=63.31 Aligned_cols=106 Identities=15% Similarity=0.218 Sum_probs=74.4
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHh--hhcCCc--cc-c--ceee-----cc-----------ccc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWN--ES-F--SVIV-----GS-----------DEV 144 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~--~~~~l~--~~-~--~~~~-----~~-----------~~~ 144 (232)
......+++.++++.|+..|+++..+|..........++ +.+|+. .. + +..+ .. --+
T Consensus 78 ~~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 78 KMELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred ceEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEE
Confidence 344577899999999999999999999998666544431 444542 11 0 0011 00 011
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhh----hhcCCEEEEeCC
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG----KAAGMEVVAVPS 193 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a----~~~G~~~i~v~~ 193 (232)
..+-++++++...+...|..|+.++||+|+..++... +..|+..+++.-
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 2446678999999999999999999999999877664 446777777765
|
The function is not known. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-07 Score=78.35 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=78.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++++.+++|++.|+++.++|+.....+...- +..|+.+.+. .-.|+--.++.++++-..+-|.|
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId~v~A-----------~~~PedK~~iV~~lQ~~G~~VaM 512 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFLA-----------EATPEDKLALIRQEQAEGRLVAM 512 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcEEEc-----------cCCHHHHHHHHHHHHHcCCeEEE
Confidence 57899999999999999999999999999888777 8889855322 12455556666666655667999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
+||+.||-.+.+.+. ++++++...+-.+..+|.+.
T Consensus 513 tGDGvNDAPALa~AD---VGIAMgsGTdvAkeAADiVL 547 (679)
T PRK01122 513 TGDGTNDAPALAQAD---VGVAMNSGTQAAKEAGNMVD 547 (679)
T ss_pred ECCCcchHHHHHhCC---EeEEeCCCCHHHHHhCCEEE
Confidence 999999999999999 77777533333355555544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.3e-07 Score=77.83 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=79.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++++.+++|++.|+++.++|+.....+...- +.+|+.+.|. .-.|+--.++.+.++-..+-|.|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~~v~A-----------~~~PedK~~iV~~lQ~~G~~VaM 508 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVDRFVA-----------ECKPEDKINVIREEQAKGHIVAM 508 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCceEEc-----------CCCHHHHHHHHHHHHhCCCEEEE
Confidence 68899999999999999999999999999888777 8899865332 12455556666666666677999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
+||+.||-.+.+++. ++++++....-.+..+|.+.
T Consensus 509 tGDGvNDAPALa~AD---VGIAMgsGTdvAkeAADiVL 543 (673)
T PRK14010 509 TGDGTNDAPALAEAN---VGLAMNSGTMSAKEAANLID 543 (673)
T ss_pred ECCChhhHHHHHhCC---EEEEeCCCCHHHHHhCCEEE
Confidence 999999999999999 77777633333355555544
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.6e-07 Score=59.96 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=64.0
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCC-ccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l-~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
.+.....++.+.|..+++. .++..+|........... ..+.. .-.+|.+...+..+ | -.+.+.++++
T Consensus 69 ke~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~-~~l~~q~ih~~~l~i~g~h~--K------V~~vrth~id-- 136 (194)
T COG5663 69 KEALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITY-AWLFIQNIHYDHLEIVGLHH--K------VEAVRTHNID-- 136 (194)
T ss_pred HHHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHH-HHHHHhccchhhhhhhcccc--c------chhhHhhccC--
Confidence 3445667888999999887 578888887666544333 33221 12344443222211 1 3456778887
Q ss_pred cEEEEeCch-hhhhhhhhcCCEEEEeCCCCCc
Q 026853 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 167 ~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
++|.|+. |-...|+++|++++.+++.+.+
T Consensus 137 --lf~ed~~~na~~iAk~~~~~vilins~ynR 166 (194)
T COG5663 137 --LFFEDSHDNAGQIAKNAGIPVILINSPYNR 166 (194)
T ss_pred --ccccccCchHHHHHHhcCCcEEEecCcccc
Confidence 8999999 8888899999999999995544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-07 Score=81.30 Aligned_cols=69 Identities=14% Similarity=-0.022 Sum_probs=50.5
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
..+-.|..+++.+++ +++++.+++|||+.||+.|++.++...+.|..|+. +..|++.+++..|+...|.
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~eV~~~L~ 721 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQREVRELLR 721 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHHHHHHHH
Confidence 345667888888888 77889999999999999999997533345555442 3557777777777655554
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.4e-06 Score=61.34 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=62.2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH-HHhcCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA-AKRLNME 164 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~-~~~~~~~ 164 (232)
..++.|++.++.+.+++.|+.++++|+..... ....| ...|+..+ +.++-...-...+.+...++.. .+++--+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 46789999999999999999999999997543 44455 55677654 4444433221122222222211 1111111
Q ss_pred CCc-EEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 165 ~~~-~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
.-+ +..|||..+|+.+....+-++.-.++
T Consensus 221 GYrIv~~iGDq~sDl~G~~~g~~RtFKLPN 250 (275)
T TIGR01680 221 GYNIVGIIGDQWNDLKGEHRGAIRSFKLPN 250 (275)
T ss_pred CceEEEEECCCHHhccCCCccCcceecCCC
Confidence 122 56799999999766532346666655
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.6e-07 Score=82.46 Aligned_cols=122 Identities=16% Similarity=0.076 Sum_probs=84.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC----------------CCCCCHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----------------~~kp~~~~~ 154 (232)
++.|++++.++.|++.|+++.++|+.....+...- +..|+...-..++.+.+.. ...-.|+--
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 57889999999999999999999999999888777 8889864222333332211 122345555
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-cchhhhHhhh--hccCcCc
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVIN--SLLDLRP 216 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~--~l~el~~ 216 (232)
.++.+.++-..+.|.|+||+.||..+.++|. +++++|....+ .+..||+++. +++.+..
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~Ad---VGIAmg~~gtdvAk~aADivL~dd~f~~I~~ 719 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLAD---VGFSMGISGTEVAKEASDIILLDDNFASIVR 719 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCC---cceecCCCccHHHHHhCCEEEecCCHHHHHH
Confidence 5566666555567999999999999999999 77777633333 3556666653 4444433
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.1e-07 Score=76.01 Aligned_cols=111 Identities=22% Similarity=0.250 Sum_probs=81.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|+.++.+++|++.|+++.++|+......+..- +.+|+++++..+. |+--.+..++++-....+.|
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId~v~Aell-----------PedK~~~V~~l~~~g~~Vam 604 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGIDEVRAELL-----------PEDKAEIVRELQAEGRKVAM 604 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChHhheccCC-----------cHHHHHHHHHHHhcCCEEEE
Confidence 58899999999999999999999999999988777 8899866554432 23334555566655578999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~ 216 (232)
|||+.||-.+...+. +++.+|....-....+|.+. +++..+..
T Consensus 605 VGDGINDAPALA~Ad---VGiAmG~GtDvA~eaADvvL~~~dL~~v~~ 649 (713)
T COG2217 605 VGDGINDAPALAAAD---VGIAMGSGTDVAIEAADVVLMRDDLSAVPE 649 (713)
T ss_pred EeCCchhHHHHhhcC---eeEeecCCcHHHHHhCCEEEecCCHHHHHH
Confidence 999999999999999 77777552222244444333 44544443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.6e-06 Score=71.90 Aligned_cols=85 Identities=15% Similarity=0.185 Sum_probs=64.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++...+..|++.|++++++|+.....++... ++.| ++.+++ +..+. --....+++.-....+.|
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VG----i~~V~a-ev~P~------~K~~~Ik~lq~~~~~VaM 790 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVG----IDNVYA-EVLPE------QKAEKIKEIQKNGGPVAM 790 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhC----cceEEe-ccCch------hhHHHHHHHHhcCCcEEE
Confidence 57899999999999999999999999999888777 8888 444432 22222 223344444444577999
Q ss_pred EeCchhhhhhhhhcCCE
Q 026853 171 IEDSVIGVVAGKAAGME 187 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~ 187 (232)
|||+.||-.+...+.+.
T Consensus 791 VGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 791 VGDGINDAPALAQADVG 807 (951)
T ss_pred EeCCCCccHHHHhhccc
Confidence 99999999999988833
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.2e-07 Score=78.65 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=84.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc----------cceeecccccC---------------
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES----------FSVIVGSDEVR--------------- 145 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~----------~~~~~~~~~~~--------------- 145 (232)
++.|++++.++.|++.|++++++|+.....+.... +..|+... -+.++++.+..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 57899999999999999999999999999888777 88898532 11233332221
Q ss_pred -CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-cchhhhHhhh--hccCcCc
Q 026853 146 -TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVIN--SLLDLRP 216 (232)
Q Consensus 146 -~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~--~l~el~~ 216 (232)
...-.|+.-..+.+.++-..+.|.|+||+.||..+.+.+. +++++|....+ .+..+|+++. +++.+..
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~Ad---VGIAmg~~gt~vak~aADivl~dd~f~~I~~ 796 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMAN---VGIAMGINGSDVAKDASDIVLSDDNFASILN 796 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCC---ccEecCCCccHHHHHhcCEEEecCCHHHHHH
Confidence 1223445555566666555677999999999999999999 66666533333 3556666653 3544443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.4e-07 Score=77.66 Aligned_cols=112 Identities=11% Similarity=0.079 Sum_probs=79.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC----------------CCCCCHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----------------~~kp~~~~~ 154 (232)
++.|++++.+++|++.|+++.++|+.....+...- +..|+.. +.++.+.+.. ...-.|+--
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 57789999999999999999999999998887776 8889853 1233222211 112344555
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
.++.+.++-..+.|.|+||+.||..+.+.|. ++++++...+-.+..+|.+.
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~Ad---VGIAmg~gtdvAk~aADiVL 642 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKAD---VGISVDTAADIAKEASDIIL 642 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHhCC---EEEEeCCccHHHHHhCCEEE
Confidence 5566666555677999999999999999999 66666533333355666554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.2e-07 Score=77.52 Aligned_cols=110 Identities=19% Similarity=0.142 Sum_probs=77.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc----------------------CCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGK 148 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~----------------------~~~k 148 (232)
++.|++++.++.|++.|+++.++|+.....+...- +..|+... ++.+++. ....
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 67899999999999999999999999999888777 88898542 1111111 1122
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHh
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 207 (232)
-.|+--.++.+.++-..+-|.|+||+.||..+.+.|. ++++++...+-.+..||.+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~Ad---VGIAm~~gtdvAkeaADiv 573 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKAD---VGIAVAGATDAARSAADIV 573 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCC---eeEEecCCcHHHHHhCCEE
Confidence 3455555666666666677999999999999999999 5555543222224445443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.1e-07 Score=78.30 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=81.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC----------------CCCCCHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----------------~~kp~~~~~ 154 (232)
++.|++++.+++|++.|+++.++|+.....+...- +..|+.. +.++++.+.. ...-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 57789999999999999999999999999888777 8889852 2333332211 122345555
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
.++.+.++-..+-|.|+||+.||..+.+.|. +++++|...+-.+..+|.+.
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~AD---VGIAmg~gtdvAkeaADiVL 677 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRAAD---IGISVDGAVDIAREAADIIL 677 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHhCC---EEEEeCCcCHHHHHhCCEEE
Confidence 6666666666677999999999999999999 77777633333356666554
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=7.9e-07 Score=77.68 Aligned_cols=120 Identities=17% Similarity=0.122 Sum_probs=84.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC----------------CCCCCHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----------------~~kp~~~~~ 154 (232)
++.|++++.+++|++.|+++.++|+.....+...- +.+|+.. +.++++.+.. ...-.|+--
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 57789999999999999999999999999888777 8889852 2233332211 122345556
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCc
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~ 216 (232)
.++.+.++-..+-|.|+||+.||..+.+.|. +++++|...+-.+..||.+. ++++.+..
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD---VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ 687 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDAD---VGISVDSGADIAKESADIILLEKSLMVLEE 687 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCC---EEEEeCcccHHHHHhcCEEEecCChHHHHH
Confidence 6666666666677999999999999999999 67777633333366666555 44444433
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-07 Score=65.20 Aligned_cols=92 Identities=18% Similarity=0.240 Sum_probs=63.4
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCC-ccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l-~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.+...||+.++|+.+.+. +.++|.|.+....+...+ +.+.- ...|+.++..+.+...+.. +.+-++.++.+.++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~---~~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGS---YIKDLSKLGRDLDN 108 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTE---EE--GGGSSS-GGG
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhccccccccccccccccccc---cccchHHHhhcccc
Confidence 456789999999999776 999999999999999888 76665 5678888876654322211 11456667778899
Q ss_pred EEEEeCchhhhhhhhhcC
Q 026853 168 SLVIEDSVIGVVAGKAAG 185 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G 185 (232)
+++|+|++.-...-...+
T Consensus 109 vvivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 109 VVIVDDSPRKWALQPDNG 126 (159)
T ss_dssp EEEEES-GGGGTTSGGGE
T ss_pred EEEEeCCHHHeeccCCce
Confidence 999999997665555556
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.5e-05 Score=58.44 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=74.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc---CCccccceeecccccC-----CCCCC-------------
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVR-----TGKPS------------- 150 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---~l~~~~~~~~~~~~~~-----~~kp~------------- 150 (232)
-.|....+++.|+++|.++.++||++...+..-+ ..+ .|...||.||.-...+ ..+|-
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM-~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGM-RFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCc-eeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhh
Confidence 3466778899999999999999999999886655 322 3778899887543211 11111
Q ss_pred ------------HHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhh-hcCCEEEEeCC
Q 026853 151 ------------PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (232)
Q Consensus 151 ------------~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~-~~G~~~i~v~~ 193 (232)
...+...++.-+....+|++|||.. +|+.... ..||.+-.+-.
T Consensus 320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 0114566677788899999999999 8998877 89999877765
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.8e-06 Score=76.37 Aligned_cols=122 Identities=15% Similarity=0.104 Sum_probs=83.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc------------------------ceeeccccc--
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEV-- 144 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~------------------------~~~~~~~~~-- 144 (232)
++.+++++.++++++.|++++++|+.....+.... +..|+...- ..++.+.+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 56789999999999999999999999999888777 777873210 023332221
Q ss_pred ----------------CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHh
Q 026853 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEV 207 (232)
Q Consensus 145 ----------------~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~ 207 (232)
-...-.|+--.++.+.++-...-|.|+||+.||+.|.+.|. +++++|....+. +..+|++
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~Ad---VGiamg~~G~~vak~aADiv 723 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKAD---IGVAMGIAGSDVSKQAADMI 723 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCC---cceecCCcccHHHHHhhceE
Confidence 11223455555555555555567899999999999999999 778776544443 5566766
Q ss_pred hhh--ccCcCc
Q 026853 208 INS--LLDLRP 216 (232)
Q Consensus 208 ~~~--l~el~~ 216 (232)
+.+ ++-+..
T Consensus 724 L~dd~f~~Iv~ 734 (997)
T TIGR01106 724 LLDDNFASIVT 734 (997)
T ss_pred EecCCHHHHHH
Confidence 543 444433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.4e-05 Score=61.81 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=69.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.++||+.++|++|+++|++++++||++ .......+ +.+|+...++.++++.. .....++..+....+
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDK 113 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCCC
Confidence 578999999999999999999999987 34444455 66788777777766533 455666666665555
Q ss_pred EEEEeCchhhhhhhhhcCCEEEE
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVA 190 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~ 190 (232)
.++++++..+...++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 68888889999999999987654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.7e-06 Score=73.70 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=76.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc--eeecccccC----------------CCCCCH
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR----------------TGKPSP 151 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~----------------~~kp~~ 151 (232)
-+|.+++++.++.|++.|+++..+|+.....+...- +..|+...-. .++.+.+.. ...-.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 368899999999999999999999999999887776 8888765543 255444322 112345
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+--.++.+.++-...-|.|.||+.||..|.+.|. |+|+++
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~AD---VGIamg 664 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAAD---VGIAMG 664 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcC---ccEEec
Confidence 5556666666666677999999999999999999 555553
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.3e-06 Score=68.14 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=82.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc----eeecccccCC----------------CCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVRT----------------GKPS 150 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~----~~~~~~~~~~----------------~kp~ 150 (232)
+|.+++++.++.+++.|+++..+|+.....+...- ++.|+...-+ ..+++.++.. ..-.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 68899999999999999999999999999888766 8888755444 2233322211 1123
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhh
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVI 208 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~ 208 (232)
|.--.++.+.|+-..+=+.|-||+.||-.+.+.+. |++++|....+. +..+|.+.
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~Ad---IGIAMG~~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKAD---IGIAMGISGTDVAKEASDMVL 718 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcc---cceeecCCccHhhHhhhhcEE
Confidence 34445666666666677899999999999999999 888887555544 55555543
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.7e-05 Score=55.38 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=58.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH----HHHHHhhhcCCccccce-eecccccCCCCCCHHHHHHHHHhcCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT----IESKISYQHGWNESFSV-IVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~----~~~~l~~~~~l~~~~~~-~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
...+.||+.+|+...-++|..++.+||+..+. ....| .+.|++..... ++.- ...+++..-.+.+-+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k~~-- 193 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQAVEKDY-- 193 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHHHhhcc--
Confidence 45789999999999999999999999997665 34456 66777664432 2222 22344444444444433
Q ss_pred CCCcEEEEeCchhhhhhhh
Q 026853 164 EPSSSLVIEDSVIGVVAGK 182 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~ 182 (232)
.-|+.|||+..|.....
T Consensus 194 --~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 194 --KIVMLVGDNLDDFGDNA 210 (274)
T ss_pred --ceeeEecCchhhhcchh
Confidence 34789999998876543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.8e-06 Score=64.27 Aligned_cols=69 Identities=13% Similarity=-0.064 Sum_probs=56.1
Q ss_pred CCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc-------CCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~-------G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+..|+.+++.+++++++.+.++++|||+.||+.|++.+ |..++.|..+ ..+..|++++++..++...|.
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~v~~~L~ 240 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQVLEFLG 240 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHHHHHHHH
Confidence 34456899999999999999999999999999999999 6667777642 335668888888888776654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.8e-05 Score=54.54 Aligned_cols=87 Identities=17% Similarity=0.089 Sum_probs=64.5
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc-ccc-ceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~-~~~-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
..+.++||+.++|+++++. +.++|+|++....+...+ +.++.. .+| +.+++.+.... +. .+.+-..++.+.
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~~--~~---~KdL~~i~~~d~ 127 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESGS--PH---TKSLLRLFPADE 127 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCCC--Cc---cccHHHHcCCCc
Confidence 3467899999999999966 999999999999999988 888877 478 66676665431 11 111213457788
Q ss_pred CcEEEEeCchhhhhhh
Q 026853 166 SSSLVIEDSVIGVVAG 181 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a 181 (232)
+.++.|+|++.--..-
T Consensus 128 ~~vvivDd~~~~~~~~ 143 (156)
T TIGR02250 128 SMVVIIDDREDVWPWH 143 (156)
T ss_pred ccEEEEeCCHHHhhcC
Confidence 8999999998544433
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.1e-06 Score=72.64 Aligned_cols=125 Identities=15% Similarity=0.130 Sum_probs=80.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc----------------------------------
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS---------------------------------- 136 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~---------------------------------- 136 (232)
++.+++.+.++.|++.|++++++|+...+.+.... ...|+-..-.
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 709 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNL 709 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 68899999999999999999999999888776655 5555432110
Q ss_pred -------eeecccccC----------------------CCCCCHHHHHHHHHhcCCC-CCcEEEEeCchhhhhhhhhcCC
Q 026853 137 -------VIVGSDEVR----------------------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 137 -------~~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
.++.+.... ..+-.|..-.++.+.++-. ..-|+++|||.||+.|.++|.+
T Consensus 710 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdV 789 (1057)
T TIGR01652 710 GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789 (1057)
T ss_pred ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCe
Confidence 122221100 0111222223333333332 4679999999999999999994
Q ss_pred EEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 187 EVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 187 ~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
.. ++.+ .........+|+++.+++.+..++
T Consensus 790 GI-gi~g-~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 790 GV-GISG-KEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred ee-EecC-hHHHHHHHhhhhhhhhHHHHHHHH
Confidence 43 4333 322234567999999888877665
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.04 E-value=4e-05 Score=48.71 Aligned_cols=87 Identities=18% Similarity=0.153 Sum_probs=57.5
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCch---HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
....++||+.++++.|++.|.+++++||++. ......| +.+|+....+.++++.. .....+++. ..
T Consensus 11 ~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~~---------~~~~~l~~~-~~ 79 (101)
T PF13344_consen 11 NGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSGM---------AAAEYLKEH-KG 79 (101)
T ss_dssp ETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHHH---------HHHHHHHHH-TT
T ss_pred eCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChHH---------HHHHHHHhc-CC
Confidence 3557899999999999999999999999953 3455566 77888766677776533 333334332 33
Q ss_pred CCcEEEEeCchhhhhhhhhcCC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
...++++|-. ...+.++.+|+
T Consensus 80 ~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 80 GKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp SSEEEEES-H-HHHHHHHHTTE
T ss_pred CCEEEEEcCH-HHHHHHHHcCC
Confidence 5678888866 56666666664
|
... |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.5e-05 Score=68.27 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=36.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
++.|++++.++.|++.|+++.++|+.....+.... +..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCC
Confidence 68899999999999999999999999998888776 778874
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=6e-05 Score=59.23 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=81.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCC--chHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~--~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
+.....++.+.+.+.|.++.++|+. +.+..+..| ...|.+..--.++.+.+....|..+..|..+++.-++++..++
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~ 178 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWI 178 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheE
Confidence 3445678899999999999999998 445556666 7667655444567777888889999999999999999999999
Q ss_pred EEeCch-hhhhhhhhcCCEEEEe
Q 026853 170 VIEDSV-IGVVAGKAAGMEVVAV 191 (232)
Q Consensus 170 ~vgD~~-~Di~~a~~~G~~~i~v 191 (232)
++||+. .|..++++.|+.|...
T Consensus 179 H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 179 HCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EecCchhhhhcCccccchhHHHH
Confidence 999999 7999999999876554
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00017 Score=53.48 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=64.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC--------------------------
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-------------------------- 145 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-------------------------- 145 (232)
..|.+.+.|.+|++.|..+++-|-+.++++...+ +.+++..+||.+++.....
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 4566778899999999999999999999999999 8899999999998764211
Q ss_pred ---CCCC-CHHHHHHHHHhcCCCCCcEE-EEeCch-hhh
Q 026853 146 ---TGKP-SPDIFLEAAKRLNMEPSSSL-VIEDSV-IGV 178 (232)
Q Consensus 146 ---~~kp-~~~~~~~~~~~~~~~~~~~~-~vgD~~-~Di 178 (232)
.+-| .|..+...+++.|+..-.++ .|+|-. ||+
T Consensus 222 ~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 222 TNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred CcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 1122 35667777888887765444 577766 554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00021 Score=59.09 Aligned_cols=82 Identities=16% Similarity=0.128 Sum_probs=64.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.+++.+.++.|++.|++++++|+.........- +.+|+ + ..-.|+.-..+.+.+.-....+.|
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi-------~-------~~~~p~~K~~~v~~l~~~g~~v~~ 411 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI-------F-------ARVTPEEKAALVEALQKKGRVVAM 411 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc-------e-------eccCHHHHHHHHHHHHHCCCEEEE
Confidence 68899999999999999999999999998887666 77775 1 112344444555555444577999
Q ss_pred EeCchhhhhhhhhcCCE
Q 026853 171 IEDSVIGVVAGKAAGME 187 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~ 187 (232)
+||+.||..+.+.+++.
T Consensus 412 vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 412 TGDGVNDAPALKKADVG 428 (499)
T ss_pred ECCChhhHHHHHhCCCc
Confidence 99999999999999944
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=5.5e-05 Score=67.95 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=39.9
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
.-|+++|||.||+.|.++|.+.. ++.+ ....+....+|+.+..++-|..+|+
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG-~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISG-QEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecC-chhHHHHHhhccchhhhHHHHHHHH
Confidence 45899999999999999998442 4433 4434456788999999988877776
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00023 Score=50.65 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=57.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc--c--ceeecccc--------cC--CCCCCHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--F--SVIVGSDE--------VR--TGKPSPDIFLE 156 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~--~--~~~~~~~~--------~~--~~kp~~~~~~~ 156 (232)
...|++.+||+.+.+. +.++|.|.+....+...+ ..+++... + ..+..+.. .+ .-|+ +..
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~ 118 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV 118 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence 5789999999999986 999999999999999888 76654221 1 11111110 01 0121 222
Q ss_pred HHHhcC--CCCCcEEEEeCchhhhhhhhhcCC
Q 026853 157 AAKRLN--MEPSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 157 ~~~~~~--~~~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
+-+.++ .+.+++++|+|++....+--..|+
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence 223443 377899999999965555444463
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00074 Score=46.12 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=55.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhc-----CCccccceeecc-c------ccCCCCCCHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----GWNESFSVIVGS-D------EVRTGKPSPDIFLE 156 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~-----~l~~~~~~~~~~-~------~~~~~kp~~~~~~~ 156 (232)
..+|+.+++..++++||++.-+|..+.-. .+..| ... +++. ..++.+ + .-..-.++|+.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L-~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL-AQHQQQGHNLPD--GPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH-HHHHhCCccCCC--CCEEECCcchhhhhhccccccChHHHHH
Confidence 56899999999999999999999997544 33333 333 2322 112222 1 11111234444443
Q ss_pred HH-Hhc----CCCCC-cEEEEeCchhhhhhhhhcCCE
Q 026853 157 AA-KRL----NMEPS-SSLVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 157 ~~-~~~----~~~~~-~~~~vgD~~~Di~~a~~~G~~ 187 (232)
.+ +.+ .-... =...||+..+|+.+-+++|+.
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 22 322 21122 244699999999999999985
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0014 Score=49.17 Aligned_cols=55 Identities=25% Similarity=0.382 Sum_probs=41.7
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeeccc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSD 142 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~ 142 (232)
....++||+.++|+.|+++|.+++++||++... ....|....+++...+.++++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 345789999999999999999999999996443 4455623356666777777664
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0017 Score=49.44 Aligned_cols=88 Identities=20% Similarity=0.241 Sum_probs=58.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCch---HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.++|++.++|++|++.|++++++||++. ......+ +.+|+....+.++++. ......+++......+
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKA 87 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCE
Confidence 5788999999999999999999999753 3333456 6678765555555442 2344455554444567
Q ss_pred EEEEeCchhhhhhhhhcCCEEE
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i 189 (232)
++++|+.. ....++..|+..+
T Consensus 88 v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCHH-HHHHHHHCCCEEe
Confidence 88999853 3445566776643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0036 Score=46.09 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=53.1
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc-cc---------cc--eeecc---cccCCCCCCHHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ES---------FS--VIVGS---DEVRTGKPSPDI 153 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~-~~---------~~--~~~~~---~~~~~~kp~~~~ 153 (232)
.+.+.+|+.++++.|.++++|+.|+|.+-.+.++..| ++.+.. +. || ..+.+ .-+.....+...
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~ 166 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA 166 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence 5678999999999999999999999999999999999 555532 21 11 11111 001111111112
Q ss_pred HH--HHHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 154 FL--EAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 154 ~~--~~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
+. ...+.+ -...+++..||+..|+.|+..+
T Consensus 167 l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 167 LEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred ccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 21 111222 2356799999999999999876
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00095 Score=53.68 Aligned_cols=87 Identities=16% Similarity=0.159 Sum_probs=69.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEE
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 171 (232)
.-||++|-+.+|++-|++.+.+|+..+-.....- ...|+++++.. .+|+--..+.++.+-...=+.|.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdfiAe-----------atPEdK~~~I~~eQ~~grlVAMt 515 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFIAE-----------ATPEDKLALIRQEQAEGRLVAMT 515 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhhhhc-----------CChHHHHHHHHHHHhcCcEEEEc
Confidence 5689999999999999999999999888776665 77787664432 23455566677777777778999
Q ss_pred eCchhhhhhhhhcCCEEEEeCC
Q 026853 172 EDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 172 gD~~~Di~~a~~~G~~~i~v~~ 193 (232)
||+.||-.+..++. +++++
T Consensus 516 GDGTNDAPALAqAd---Vg~AM 534 (681)
T COG2216 516 GDGTNDAPALAQAD---VGVAM 534 (681)
T ss_pred CCCCCcchhhhhcc---hhhhh
Confidence 99999999999999 66666
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0078 Score=40.45 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=63.8
Q ss_pred CCCCCcHHHHHHHHHhC-C-CCEEEEeCCch-------HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHh
Q 026853 90 VKALPGANRLIKHLSCH-G-VPMALASNSHR-------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~-g-~~~~i~s~~~~-------~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
..+.|...+-+++++.. | ..++++||+.- ......++...|++-.-+ ...++-...+.+.+....
T Consensus 60 ~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlRH------s~kKP~ct~E~~~y~~~N 133 (190)
T KOG2961|consen 60 LAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLRH------SVKKPACTAEEVEYHFGN 133 (190)
T ss_pred cccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceEee------cccCCCccHHHHHHHhCC
Confidence 45667777778888874 3 67999998731 122333434444432111 111111123333333322
Q ss_pred cC-CCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccc
Q 026853 161 LN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 161 ~~-~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
-. ..+++++||||.. .||.+|..+|.-++|...|.....
T Consensus 134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred cccCChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 12 5789999999999 999999999999999988654443
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.024 Score=46.15 Aligned_cols=83 Identities=10% Similarity=-0.053 Sum_probs=50.7
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce--------eecccccCCCCCCHHH-HHHHHHhcCCCCCcEE
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDI-FLEAAKRLNMEPSSSL 169 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~--------~~~~~~~~~~kp~~~~-~~~~~~~~~~~~~~~~ 169 (232)
.++..+..| +++++|..++-.++..+++++|.+..... .+++--. ++.-.+. ...+.+.++ +....+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g-~~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFV-DERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhC-ccCcee
Confidence 566667777 99999999999999999666876543211 1111111 1111233 444445565 224478
Q ss_pred EEeCchhhhhhhhhcC
Q 026853 170 VIEDSVIGVVAGKAAG 185 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G 185 (232)
-+||+..|-....-|.
T Consensus 177 g~~~~~~~~~f~~~ck 192 (498)
T PLN02499 177 GLGRISASSSFLSLCK 192 (498)
T ss_pred cccCCcccchhhhhCc
Confidence 8898887777666655
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0045 Score=46.82 Aligned_cols=49 Identities=18% Similarity=0.145 Sum_probs=35.2
Q ss_pred CCCCCHHHHHHHH--------HhcCC-CCCcEEEEeCch-hhhhhhh---------------hcCCEEEEeCCC
Q 026853 146 TGKPSPDIFLEAA--------KRLNM-EPSSSLVIEDSV-IGVVAGK---------------AAGMEVVAVPSL 194 (232)
Q Consensus 146 ~~kp~~~~~~~~~--------~~~~~-~~~~~~~vgD~~-~Di~~a~---------------~~G~~~i~v~~~ 194 (232)
.+||.+-.|..+. +..+. ++..+.+|||++ +|+..|. .-||.+|+|.+|
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 5677765554332 22233 456788999999 8999996 778889999886
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.01 Score=42.55 Aligned_cols=27 Identities=11% Similarity=-0.005 Sum_probs=20.2
Q ss_pred CCc-EEEEeCchhhhhhhhhcCCEEEEeC
Q 026853 165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVP 192 (232)
Q Consensus 165 ~~~-~~~vgD~~~Di~~a~~~G~~~i~v~ 192 (232)
..+ ++.+|||+||+.+....... +.|.
T Consensus 208 ~~r~t~~~GDg~nD~Pl~ev~d~A-fiV~ 235 (274)
T COG3769 208 GARTTLGLGDGPNDAPLLEVMDYA-FIVK 235 (274)
T ss_pred ceeEEEecCCCCCcccHHHhhhhh-eeec
Confidence 344 88999999999999876644 4444
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.04 Score=39.88 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=30.9
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l 131 (232)
...+.||+.+.++.|.+. .+-+++|.+...++.+.- ...|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence 357899999999999886 566777877777766655 55555
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.018 Score=45.15 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=72.4
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc--CCccccceeecccc---------------cC-----------
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDE---------------VR----------- 145 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--~l~~~~~~~~~~~~---------------~~----------- 145 (232)
+....++..+++.|.++.+.||+............+ +|..+|+.++.... ..
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~ 280 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTG 280 (424)
T ss_pred CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCC
Confidence 334448899999999999999997766655553333 48888888765420 01
Q ss_pred ----CCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhh-hhhcCCEEEEeCCC
Q 026853 146 ----TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVA-GKAAGMEVVAVPSL 194 (232)
Q Consensus 146 ----~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~-a~~~G~~~i~v~~~ 194 (232)
.+.+.+.....+++.++....+++++||.. -||.- -+.-|+.++.|...
T Consensus 281 p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 281 PLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred cchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence 223344567778888888889999999999 56654 56689999998773
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0011 Score=42.06 Aligned_cols=58 Identities=22% Similarity=0.274 Sum_probs=29.2
Q ss_pred EEEeCCCcccccHHHHHHHH--HHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccH
Q 026853 12 VILDLDGTLLNTDGMFSEVL--KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK 72 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (232)
++||+||||++....++.+. ...+++.+.+. ..+......+.. .+...++..|++...
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~--~~lTNns~~s~~-~~~~~L~~~Gi~~~~ 60 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV--VFLTNNSSRSRE-EYAKKLKKLGIPVDE 60 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE--EEEES-SSS-HH-HHHHHHHHTTTT--G
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE--EEEeCCCCCCHH-HHHHHHHhcCcCCCc
Confidence 68999999998765554432 23344445322 222223333333 334444778877443
|
... |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.026 Score=50.62 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=36.5
Q ss_pred cHHhHHHHHHHHHHhhhc-------cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHH
Q 026853 71 AKHEFVNEVYSMFSDHLC-------KVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~ 122 (232)
+.++......+..++... +-++.+|+.+.++.|+++|++++++|+...+.+.
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAi 682 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAI 682 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHH
Confidence 344444455444443321 3367899999999999999999999988766543
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0041 Score=53.15 Aligned_cols=110 Identities=16% Similarity=0.165 Sum_probs=70.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce--eecccccC----------------CCCCCH-
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSDEVR----------------TGKPSP- 151 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~--~~~~~~~~----------------~~kp~~- 151 (232)
+..||+++.++.++..|+.+-.+|+..-..++... ...|+...=+. .+.+.+.. ...+.|
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 57899999999999999999999999988877666 77776443221 12221111 011111
Q ss_pred --HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHh
Q 026853 152 --DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEV 207 (232)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~ 207 (232)
..+-+.++. ..+=+.+-||+.||-.+.++|. |+++||-...+. +..+|.+
T Consensus 726 DK~lLVk~L~~---~g~VVAVTGDGTNDaPALkeAD---VGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 726 DKHLLVKGLIK---QGEVVAVTGDGTNDAPALKEAD---VGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hHHHHHHHHHh---cCcEEEEecCCCCCchhhhhcc---cchhccccchhhhhhhCCeE
Confidence 222233332 2234567899999999999999 777887655554 4444433
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.031 Score=41.05 Aligned_cols=94 Identities=13% Similarity=0.184 Sum_probs=61.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc----cccC----CCC-------CCHHHH
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DEVR----TGK-------PSPDIF 154 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~----~~~~----~~k-------p~~~~~ 154 (232)
+.+.+|..++++.|+++++|+.++|.+.-..++..+.+..++.+ +-.+++- ++.+ ..+ .+...+
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 44668899999999999999999999998888888855555443 2211111 1111 111 122334
Q ss_pred HHHHHhcC--CCCCcEEEEeCchhhhhhhhhc
Q 026853 155 LEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 155 ~~~~~~~~--~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
+...+.++ -...++++-||+..|+.|+..+
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 44444443 3456799999999999998754
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.024 Score=41.43 Aligned_cols=81 Identities=14% Similarity=0.035 Sum_probs=57.7
Q ss_pred CCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcC
Q 026853 108 VPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185 (232)
Q Consensus 108 ~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G 185 (232)
..-++||++.--....+. -.+++...| +.|+++-. ..+...|+++.+++|-+...-++|||+...-.+|+.++
T Consensus 176 ~vNvLVTs~qLVPaLaKc-LLy~L~~~f~ieNIYSa~k----vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~ 250 (274)
T TIGR01658 176 CINVLVTSGQLIPSLAKC-LLFRLDTIFRIENVYSSIK----VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMN 250 (274)
T ss_pred eeEEEEEcCccHHHHHHH-HHhccCCccccccccchhh----cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcC
Confidence 334666666432222222 235666665 34444433 23467999999999998888999999999999999999
Q ss_pred CEEEEeCC
Q 026853 186 MEVVAVPS 193 (232)
Q Consensus 186 ~~~i~v~~ 193 (232)
++++-+..
T Consensus 251 wPFw~I~~ 258 (274)
T TIGR01658 251 WPFVKIDL 258 (274)
T ss_pred CCeEEeec
Confidence 99999987
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.012 Score=39.02 Aligned_cols=90 Identities=12% Similarity=0.200 Sum_probs=57.7
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCC--chHHHHHHH---hhhcCCccccceeecccccCCCCCCHHHHHHHHHhc
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNS--HRATIESKI---SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~--~~~~~~~~l---~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 161 (232)
+.++...|++.+.+++|-+. +.++|+|.. .+...+... .+.+.+-++-..++|+.-
T Consensus 64 FRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK------------------ 124 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK------------------ 124 (180)
T ss_pred hhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC------------------
Confidence 45678899999999999988 899999987 233333332 144455454455565522
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
|+- ..-++|+|++-.++..+... |++...++..+
T Consensus 125 niv-kaDilIDDnp~nLE~F~G~k---IlFdA~HN~ne 158 (180)
T COG4502 125 NIV-KADILIDDNPLNLENFKGNK---ILFDAHHNKNE 158 (180)
T ss_pred CeE-EeeEEecCCchhhhhccCce---EEEecccccCc
Confidence 221 12378999999999887665 66655444333
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.051 Score=40.73 Aligned_cols=102 Identities=11% Similarity=0.164 Sum_probs=63.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCC---chHHHHHHHhhhcCCccccceeeccccc-----CCCCCC-------HHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNS---HRATIESKISYQHGWNESFSVIVGSDEV-----RTGKPS-------PDIFL 155 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~~l~~~~~~~~~~~~~-----~~~kp~-------~~~~~ 155 (232)
.+.|++.+++++|+++|.+++++||+ +.......+ +.+|+....+.++++... ...++. ...+.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~ 95 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLK 95 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHH
Confidence 45679999999999999999999984 466666677 778887766777765311 111111 13466
Q ss_pred HHHHhcCCC----CCcEEEEeCch----hhhhhh---hhcCCEEEEeCC
Q 026853 156 EAAKRLNME----PSSSLVIEDSV----IGVVAG---KAAGMEVVAVPS 193 (232)
Q Consensus 156 ~~~~~~~~~----~~~~~~vgD~~----~Di~~a---~~~G~~~i~v~~ 193 (232)
..++.+|+. ..+.+++|... .++..+ .+.|...+..+.
T Consensus 96 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~ 144 (249)
T TIGR01457 96 EAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNG 144 (249)
T ss_pred HHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECC
Confidence 667766643 22456666542 233221 145877666555
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0033 Score=55.05 Aligned_cols=77 Identities=13% Similarity=0.028 Sum_probs=55.7
Q ss_pred cCCCCCCHHHHHHHHH---hcCCCCCcEEEEeCchhhhhhhhhcCC-------------EEEEeCCCCCccccchhhhHh
Q 026853 144 VRTGKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGM-------------EVVAVPSLPKQTHRYTAADEV 207 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~---~~~~~~~~~~~vgD~~~Di~~a~~~G~-------------~~i~v~~~~~~~~~~~~~~~~ 207 (232)
...+..|+.+++.+++ .+|+.++.+++|||+.||..|.+.++- -+|.|.. ....|.+.
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~------~~S~A~y~ 830 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ------KPSKAKYY 830 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC------CCccCeEe
Confidence 3456667788888874 468999999999999999999998862 2333322 13556677
Q ss_pred hhhccCcCccccCCCCCCC
Q 026853 208 INSLLDLRPEKWGLPPFQD 226 (232)
Q Consensus 208 ~~~l~el~~~l~~~~~~~~ 226 (232)
+++..|+..+|..+.+.+.
T Consensus 831 L~d~~eV~~lL~~L~~~~~ 849 (854)
T PLN02205 831 LDDTAEIVRLMQGLASVSE 849 (854)
T ss_pred cCCHHHHHHHHHHHHhcch
Confidence 7888888877776665544
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.076 Score=39.95 Aligned_cols=68 Identities=16% Similarity=0.053 Sum_probs=46.9
Q ss_pred CCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcC---CEEEEeCCCCCccccc-hhhhHhhhhccCc
Q 026853 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG---MEVVAVPSLPKQTHRY-TAADEVINSLLDL 214 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G---~~~i~v~~~~~~~~~~-~~~~~~~~~l~el 214 (232)
+..++.++..++++......-+++.||...|=.+++.+. -.++.+..+....... ..+.....++..+
T Consensus 180 ~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~~~~~~~~~~~~l~~~ 251 (266)
T COG1877 180 GVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKFRLAGVYGFLRSLYKL 251 (266)
T ss_pred CcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcccccccccccHHHHHHHHHH
Confidence 444778889899988877667999999999988888877 5666666664444442 3444444444443
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.0044 Score=40.93 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=24.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATI 121 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~ 121 (232)
.+.+++.+.++.+++.|+.++++|+.+....
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 4566777888888888999999998876643
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0076 Score=47.65 Aligned_cols=69 Identities=13% Similarity=-0.005 Sum_probs=50.2
Q ss_pred CCCCHHHHHHHHHhcCCCCCc---EEEEeCchhhhhhhhhc-----CCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 147 GKPSPDIFLEAAKRLNMEPSS---SLVIEDSVIGVVAGKAA-----GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~---~~~vgD~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
+..|..+++.+++.+++...+ .++|||..||..|++.+ |+. |.|..+ . ....|.+.+++..|+..+|
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~--~--~~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSV--P--KESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecC--C--CCccceEEcCCHHHHHHHH
Confidence 567789999999999988763 38999999999999963 533 444331 1 1345677888888877776
Q ss_pred cC
Q 026853 219 WG 220 (232)
Q Consensus 219 ~~ 220 (232)
..
T Consensus 374 ~~ 375 (384)
T PLN02580 374 KS 375 (384)
T ss_pred HH
Confidence 53
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.17 Score=37.63 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=48.3
Q ss_pred CCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCC
Q 026853 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (232)
Q Consensus 107 g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~ 186 (232)
.+++++||......-++.++-...|.-.+|..+.-. +-++. .+++.++- -+||+|....++.|. .++
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLg----G~~K~----~vL~~~~p----hIFFDDQ~~H~~~a~-~~v 252 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLG----GLPKG----PVLKAFRP----HIFFDDQDGHLESAS-KVV 252 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhC----CCchh----HHHHhhCC----CEeecCchhhhhHhh-cCC
Confidence 478999998866655666522223444555443222 22232 34455553 299999999999999 788
Q ss_pred EEEEeCCCC
Q 026853 187 EVVAVPSLP 195 (232)
Q Consensus 187 ~~i~v~~~~ 195 (232)
++..|..|.
T Consensus 253 ps~hVP~gv 261 (264)
T PF06189_consen 253 PSGHVPYGV 261 (264)
T ss_pred CEEeccCCc
Confidence 888887754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.11 Score=38.90 Aligned_cols=102 Identities=19% Similarity=0.277 Sum_probs=59.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeeccccc-----CC--CC----CCHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEV-----RT--GK----PSPDIFLE 156 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~-----~~--~k----p~~~~~~~ 156 (232)
.+.|++.+++++|++.|.+++++||+.... ....+ ..+|+.-.-+.++++... .. .+ --...+..
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l-~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~ 95 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF-ATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIH 95 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHH
Confidence 457899999999999999999999997644 34445 556775445556554211 00 00 01123445
Q ss_pred HHHhcCCC----CCcEEEEeCchh-hhhhhh------hcCCEEEEeCC
Q 026853 157 AAKRLNME----PSSSLVIEDSVI-GVVAGK------AAGMEVVAVPS 193 (232)
Q Consensus 157 ~~~~~~~~----~~~~~~vgD~~~-Di~~a~------~~G~~~i~v~~ 193 (232)
.++..|+. ..+.+++|...+ +..... ..|...+..+.
T Consensus 96 ~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~ 143 (248)
T PRK10444 96 ELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNP 143 (248)
T ss_pred HHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECC
Confidence 55554543 235677777653 322222 33777666665
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.12 Score=38.32 Aligned_cols=53 Identities=26% Similarity=0.387 Sum_probs=39.3
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGS 141 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~ 141 (232)
...++|++.+.+..++++|+++.++||+. .......+.+.+|+.-..+.++++
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 34578999999999999999999999775 344445563446776666666655
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.024 Score=44.89 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=29.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 125 (232)
.+.+++.+.|+.|.+. .+++|+|+.....+.+.+
T Consensus 141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l 174 (384)
T PLN02580 141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELV 174 (384)
T ss_pred cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHh
Confidence 5667889999999988 589999999999887666
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.091 Score=42.46 Aligned_cols=92 Identities=20% Similarity=0.174 Sum_probs=70.0
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc----ccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
...+++..|+++|.-+++.|-+....+...+.++-. -++.-+ ......|+.+-++.+++++|+..+..+|
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~------MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvF 332 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPD------MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVF 332 (574)
T ss_pred HHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCC------eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEE
Confidence 456778999999999999999988888877734332 122111 1224678899999999999999999999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCC
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++|++-..+-.+.-+- +..+..
T Consensus 333 iDD~p~ErE~vk~~~~-v~Vi~~ 354 (574)
T COG3882 333 IDDNPAERELVKRELP-VSVIEF 354 (574)
T ss_pred ecCCHHHHHHHHhcCc-eeeccC
Confidence 9999998888888775 344443
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.037 Score=46.65 Aligned_cols=121 Identities=12% Similarity=0.002 Sum_probs=68.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh-cCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
-..++..-|..|+.++..-.++++...+..-...+.. ..+......++++.-.+..| ....+.+-++-+ ..+..
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQK--A~v~~llq~~t~---krvc~ 786 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQK--AQVVRLLQKKTG---KRVCA 786 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHH--HHHHHHHHHhhC---ceEEE
Confidence 3456777788888876666666776666644443211 12222333444432222222 222333333333 67999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
|||+.||+.|.++|... |++.+ ....+..-.||+-+.-++-+..+|+
T Consensus 787 IGDGGNDVsMIq~A~~G-iGI~g-kEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 787 IGDGGNDVSMIQAADVG-IGIVG-KEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred EcCCCccchheeecccc-eeeec-ccccccchhccccHHHHHHHHHHhh
Confidence 99999999999887744 44444 3333334567777777666665555
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.0091 Score=42.46 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=14.5
Q ss_pred cccEEEEeCCCccccc
Q 026853 8 LMSCVILDLDGTLLNT 23 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~ 23 (232)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999975
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.0093 Score=41.10 Aligned_cols=14 Identities=43% Similarity=0.793 Sum_probs=12.9
Q ss_pred ccEEEEeCCCcccc
Q 026853 9 MSCVILDLDGTLLN 22 (232)
Q Consensus 9 ~k~i~fDlDGTL~~ 22 (232)
+|+|+||+||||++
T Consensus 1 ~~~~~~D~Dgtl~~ 14 (154)
T TIGR01670 1 IRLLILDVDGVLTD 14 (154)
T ss_pred CeEEEEeCceeEEc
Confidence 58999999999997
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.038 Score=41.62 Aligned_cols=49 Identities=18% Similarity=0.379 Sum_probs=38.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchH---HHHHHHhhhcCCccccceeecc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGS 141 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~~l~~~~~~~~~~ 141 (232)
+.|++.+++++|+++|++++++||++.. .....+ +.+|+.-..+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence 6789999999999999999999997544 355566 667876555666654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.014 Score=39.63 Aligned_cols=18 Identities=39% Similarity=0.599 Sum_probs=16.1
Q ss_pred cccccEEEEeCCCccccc
Q 026853 6 KKLMSCVILDLDGTLLNT 23 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~ 23 (232)
..++|+++||+||||.|.
T Consensus 5 a~~IkLli~DVDGvLTDG 22 (170)
T COG1778 5 AKNIKLLILDVDGVLTDG 22 (170)
T ss_pred hhhceEEEEeccceeecC
Confidence 357999999999999987
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.74 Score=41.56 Aligned_cols=72 Identities=7% Similarity=-0.018 Sum_probs=48.8
Q ss_pred HHHHHHHhhhcCCccccceeecc-----cccCCCCCCHHHHHHHHHhcCCCCCcE-EEEeCchh-hhhhhhhcCCEEEEe
Q 026853 119 ATIESKISYQHGWNESFSVIVGS-----DEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVI-GVVAGKAAGMEVVAV 191 (232)
Q Consensus 119 ~~~~~~l~~~~~l~~~~~~~~~~-----~~~~~~kp~~~~~~~~~~~~~~~~~~~-~~vgD~~~-Di~~a~~~G~~~i~v 191 (232)
..++..| ...++... .+++. +.++..-.+..+++++..++|++.+++ +|+|||.| |++....--..+|.+
T Consensus 924 ~elr~~L-r~~gLr~~--~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~ 1000 (1050)
T TIGR02468 924 KELRKLL-RIQGLRCH--AVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVIL 1000 (1050)
T ss_pred HHHHHHH-HhCCCceE--EEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEE
Confidence 3455555 55555432 23332 345567778899999999999999999 55999999 988775333345555
Q ss_pred CC
Q 026853 192 PS 193 (232)
Q Consensus 192 ~~ 193 (232)
.+
T Consensus 1001 ~g 1002 (1050)
T TIGR02468 1001 KG 1002 (1050)
T ss_pred ec
Confidence 44
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.057 Score=47.63 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=26.4
Q ss_pred CCCcHHHHHHHH-HhCCCCEEEEeCCchHHHHHHH
Q 026853 92 ALPGANRLIKHL-SCHGVPMALASNSHRATIESKI 125 (232)
Q Consensus 92 ~~~~~~~~l~~l-~~~g~~~~i~s~~~~~~~~~~l 125 (232)
+.+++.++|+.| +..|..++|+|+.....++..+
T Consensus 617 p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 617 PSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 345677888887 5567889999999988877666
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.15 Score=44.09 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=66.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc--------------------cceeecccccCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--------------------FSVIVGSDEVRTGKP 149 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~--------------------~~~~~~~~~~~~~kp 149 (232)
.++.++.++.++.|...+++++.+|+...-.+-+.. +..|+... .|..+. -+...+++
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVa-k~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~-lp~~p~~~ 751 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVA-KEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIV-LPLKPGKK 751 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheeh-heeeeeccCceeeccCccCCCceeeEecCCCcee-ecCCCCcc
Confidence 467899999999999999999999999776655554 54554322 011000 01111111
Q ss_pred C---------------------------------------HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEE
Q 026853 150 S---------------------------------------PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (232)
Q Consensus 150 ~---------------------------------------~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~ 190 (232)
+ |..-+.++..++--.--++|-||+.||+.+.+.|.+..+.
T Consensus 752 ~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVAL 831 (1160)
T KOG0209|consen 752 KTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVAL 831 (1160)
T ss_pred chhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceeh
Confidence 1 1122334444444445699999999999999999977777
Q ss_pred eCCC
Q 026853 191 VPSL 194 (232)
Q Consensus 191 v~~~ 194 (232)
.++.
T Consensus 832 L~~~ 835 (1160)
T KOG0209|consen 832 LNNP 835 (1160)
T ss_pred hcCC
Confidence 7663
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.25 Score=38.62 Aligned_cols=90 Identities=16% Similarity=0.194 Sum_probs=60.3
Q ss_pred ccCCCCCcHHHHHHHHHhC----CCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHh
Q 026853 88 CKVKALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~----g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
....+.|++.++++.|+.. |+++.++||+. .......+.+.+|+.-..+.++++. ......++.
T Consensus 13 ~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~ 83 (321)
T TIGR01456 13 RGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNK 83 (321)
T ss_pred CCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHH
Confidence 3446799999999999998 99999999986 3333333336677754444544432 233455555
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEE
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~ 190 (232)
++ ..++++|.+. -...++.+|+..+.
T Consensus 84 ~~---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 84 YE---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred cC---CceEEEeChH-HHHHHHHcCCcccc
Confidence 43 2688999765 57777789977653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.024 Score=39.71 Aligned_cols=17 Identities=41% Similarity=0.649 Sum_probs=15.3
Q ss_pred ccccEEEEeCCCccccc
Q 026853 7 KLMSCVILDLDGTLLNT 23 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~ 23 (232)
..+|+++||+||||.|.
T Consensus 5 ~~i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDG 21 (169)
T ss_pred ccCeEEEEeCceeeECC
Confidence 46999999999999986
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.04 Score=47.42 Aligned_cols=104 Identities=14% Similarity=0.105 Sum_probs=62.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc---------------cccee---------ecccccCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE---------------SFSVI---------VGSDEVRT 146 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~---------------~~~~~---------~~~~~~~~ 146 (232)
+|...+.+.+..++..|+++..+|+..+-...... +..|+-. ..+.+ +.+.+ .
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA-~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~e--L 666 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSE--L 666 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhh-hheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccc--c
Confidence 46678889999999999999999998776665554 5555311 01111 11111 1
Q ss_pred CCCCHHHHHHHHHhcC------CCC--------------CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc
Q 026853 147 GKPSPDIFLEAAKRLN------MEP--------------SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR 200 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~------~~~--------------~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~ 200 (232)
..-.++.+.++++.+. .+| +=|.+.||+.||-.+.+.+. |+|++|......
T Consensus 667 ~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKAD---IGVAMGiaGSDv 737 (1019)
T KOG0203|consen 667 PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKAD---IGVAMGIAGSDV 737 (1019)
T ss_pred cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccc---cceeeccccchH
Confidence 1112344444444332 111 23557899999999999999 666665444333
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.99 E-value=1.5 Score=31.65 Aligned_cols=87 Identities=18% Similarity=0.250 Sum_probs=51.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHH---HHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
...||..+.++.|+.++.++-.+||...+.- ...| .++|+.-.-+.++++- .+....+++-++.|
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL-~rlgf~v~eeei~tsl---------~aa~~~~~~~~lrP-- 90 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL-QRLGFDVSEEEIFTSL---------PAARQYLEENQLRP-- 90 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH-HHhCCCccHHHhcCcc---------HHHHHHHHhcCCCc--
Confidence 4789999999999988899999999976653 3344 5556543334444331 13344444445444
Q ss_pred EEEEeCch-hhhhhhhhcCCEEE
Q 026853 168 SLVIEDSV-IGVVAGKAAGMEVV 189 (232)
Q Consensus 168 ~~~vgD~~-~Di~~a~~~G~~~i 189 (232)
-+.|.|.. .|......-.-.++
T Consensus 91 ~l~v~d~a~~dF~gidTs~pn~V 113 (262)
T KOG3040|consen 91 YLIVDDDALEDFDGIDTSDPNCV 113 (262)
T ss_pred eEEEcccchhhCCCccCCCCCeE
Confidence 24444444 45554444433333
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.86 E-value=1.5 Score=28.85 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=56.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH-HHHHHhhhcCCcccccee-----ecccccCCCCCCHHHHHHHHHhcC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVI-----VGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~~l~~~~~~~-----~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.+..+++++..|..|++.|+.+++.|++.... +...| +.+....-+-.- +.....+ .-.+...+.+.-...|
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L-~~fkvk~~Gvlkps~e~ft~~~~g-~gsklghfke~~n~s~ 119 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGL-ETFKVKQTGVLKPSLEEFTFEAVG-DGSKLGHFKEFTNNSN 119 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHH-HHhccCcccccchhhhcCceeeec-CcccchhHHHHhhccC
Confidence 45789999999999999999999999996554 45555 655443211100 1111111 1223345677777778
Q ss_pred CCCCcEEEEeCchhh
Q 026853 163 MEPSSSLVIEDSVIG 177 (232)
Q Consensus 163 ~~~~~~~~vgD~~~D 177 (232)
+.-.+..+|+|...+
T Consensus 120 ~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 120 SIEKNKQVFDDESRN 134 (144)
T ss_pred cchhceeeecccccC
Confidence 877888888887643
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.73 E-value=1.4 Score=37.22 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=17.4
Q ss_pred EEEEeCchhhhhhhhhcCCE
Q 026853 168 SLVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~ 187 (232)
...||...+|+-.-+.+|++
T Consensus 653 YAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 653 YAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred eeecCCCcccceeeeeecCC
Confidence 44699999999999999985
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.42 Score=36.32 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=34.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 135 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~ 135 (232)
+...+.|+.|++.|++++++|+.+...+...+ +.+++..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~-~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLR-KELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCE
Confidence 45678899999999999999999999888888 888876544
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.1 Score=41.12 Aligned_cols=71 Identities=13% Similarity=-0.105 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHhcCCCCC---cEEEEeCchhhhhhhhhcC----CEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 147 GKPSPDIFLEAAKRLNMEPS---SSLVIEDSVIGVVAGKAAG----MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~---~~~~vgD~~~Di~~a~~~G----~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
...|+.+++.+++.++.... -.+|+||...|-.+++.+. .-+|.|.. . .....|.+.+++.+|+..+|.
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~--~--~k~T~A~y~L~dp~eV~~fL~ 356 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSK--F--PKDTDASYSLQDPSEVMDFLA 356 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECC--C--CCCCcceEeCCCHHHHHHHHH
Confidence 45678899999999987533 4899999999999988762 23455543 1 113557778888888877765
Q ss_pred CC
Q 026853 220 GL 221 (232)
Q Consensus 220 ~~ 221 (232)
.+
T Consensus 357 ~L 358 (366)
T PLN03017 357 RL 358 (366)
T ss_pred HH
Confidence 44
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.58 Score=35.42 Aligned_cols=39 Identities=15% Similarity=0.251 Sum_probs=32.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.|++++++|+.+++.|+++...+...+ +.+++..
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 61 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYL-KELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecCCChHHHHHHH-HHhCCCC
Confidence 44568899999999999999999999888777 7777653
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.03 E-value=2 Score=32.87 Aligned_cols=44 Identities=20% Similarity=0.377 Sum_probs=33.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHh--hhcCCc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWN 132 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~--~~~~l~ 132 (232)
.-.+.||+.+.++.|++.|..+.++||+....-+...+ +.+|+.
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 45789999999999999999999999996554433331 455654
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=90.98 E-value=0.49 Score=42.27 Aligned_cols=35 Identities=14% Similarity=0.326 Sum_probs=28.2
Q ss_pred CCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHH
Q 026853 91 KALPGANRLIKHLSCH-GVPMALASNSHRATIESKI 125 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l 125 (232)
.+.|++.++|+.|.+. +..++|+|+.....++..+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~f 657 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHh
Confidence 4667888889888875 5679999999988887666
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.61 Score=34.38 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=33.3
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.|++|++.|++++++|+.+...+...+ +.+|+..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~-~~lg~~~ 56 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYR-EELGVEP 56 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCC
Confidence 45678999999999999999999998888777 7788754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=90.25 E-value=0.48 Score=35.16 Aligned_cols=65 Identities=20% Similarity=0.090 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHHhcCCC---CCcEEEEeCchhhhhhhhhcCCE-----EEEeCCCCCccccchhhhHhhhhc
Q 026853 146 TGKPSPDIFLEAAKRLNME---PSSSLVIEDSVIGVVAGKAAGME-----VVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~---~~~~~~vgD~~~Di~~a~~~G~~-----~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
....|..+++.+++.++.. +.-++++||...|-.+.+.+.-. ++.|..... ......|.+.+++.
T Consensus 162 ~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~-~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 162 PGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSV-GEKPTAASYRLDDP 234 (235)
T ss_dssp TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-------------------
T ss_pred CCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecc-cccccccccccccC
Confidence 3444788999999999876 77899999999999998886543 455555222 23345666666553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.54 Score=41.53 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=25.3
Q ss_pred CCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHH
Q 026853 91 KALPGANRLIKHLSCH-GVPMALASNSHRATIESKI 125 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l 125 (232)
.+.|++.++|..|.+. +-.++|+|+.....+++.+
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 567 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHh
Confidence 4556777788888764 4578888888877777665
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.13 Score=40.57 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=18.3
Q ss_pred ccEEEEeCCCccc---c-cHH-HHHHHHHHHHHHc
Q 026853 9 MSCVILDLDGTLL---N-TDG-MFSEVLKTFLVKY 38 (232)
Q Consensus 9 ~k~i~fDlDGTL~---~-~~~-~~~~~~~~~~~~~ 38 (232)
-.+|++|+||||+ + .+. .+.....++++++
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~L 145 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKL 145 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHH
Confidence 4678899999999 3 333 3344444444443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.16 Score=37.87 Aligned_cols=15 Identities=33% Similarity=0.505 Sum_probs=12.7
Q ss_pred ccEEEEeCCCccccc
Q 026853 9 MSCVILDLDGTLLNT 23 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~ 23 (232)
-++++||+||||++.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 368999999999963
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=90.07 E-value=0.59 Score=34.08 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=33.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+...+.|++|++.|++++++|+++...+...+ +.+++..
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~-~~l~~~~ 59 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALA-VLIGTSG 59 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHH-HHhCCCC
Confidence 4456678899999999999999999988888777 7777653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.71 Score=33.78 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 96 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
.++.|+.|++.|++++++|+.+...+...+ +.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~-~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQ-KALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 467899999999999999999999998888 778875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.83 E-value=0.18 Score=39.62 Aligned_cols=71 Identities=13% Similarity=-0.099 Sum_probs=49.1
Q ss_pred CCCCHHHHHHHHHhcCCCCC---cEEEEeCchhhhhhhhhcC----CEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 147 GKPSPDIFLEAAKRLNMEPS---SSLVIEDSVIGVVAGKAAG----MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~---~~~~vgD~~~Di~~a~~~G----~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+..|+.+++.+++.++.... -++|+||...|-.+++.+. .-.|.|..+. ....|.+.+++.+|+..+|.
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~----k~T~A~y~L~dp~eV~~~L~ 342 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA----KETNASYSLQEPDEVMEFLE 342 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC----CCCcceEeCCCHHHHHHHHH
Confidence 44678899999999886543 2899999999999988652 1235554311 13467788888888877765
Q ss_pred CC
Q 026853 220 GL 221 (232)
Q Consensus 220 ~~ 221 (232)
.+
T Consensus 343 ~L 344 (354)
T PLN02151 343 RL 344 (354)
T ss_pred HH
Confidence 43
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.72 E-value=0.76 Score=33.80 Aligned_cols=41 Identities=17% Similarity=0.104 Sum_probs=33.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+...+.|.++++.|++++++|+++...+...+ +.+++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAA-KLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCCC
Confidence 4456678899999999999999999998887777 7777754
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=89.46 E-value=1.3 Score=29.42 Aligned_cols=14 Identities=36% Similarity=0.546 Sum_probs=12.4
Q ss_pred cEEEEeCCCccccc
Q 026853 10 SCVILDLDGTLLNT 23 (232)
Q Consensus 10 k~i~fDlDGTL~~~ 23 (232)
|+|+||+||||+..
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 79999999999853
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.41 E-value=3.1 Score=32.94 Aligned_cols=81 Identities=21% Similarity=0.214 Sum_probs=55.3
Q ss_pred CCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 107 GVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 107 g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
++.-++||+...-....++ -.+||...| ..|++.-..+ +...|+++..++|- .-.-++|||+...-.+|++.
T Consensus 370 ncvnVlvTttqLipalaKv-LL~gLg~~fpiENIYSa~kiG----KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~l 443 (468)
T KOG3107|consen 370 NCVNVLVTTTQLIPALAKV-LLYGLGSSFPIENIYSATKIG----KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKAL 443 (468)
T ss_pred ceeEEEEeccchhHHHHHH-HHHhcCCcccchhhhhhhhcc----HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhh
Confidence 4556677777543333333 335665554 3344433322 35789999999997 45677899999999999999
Q ss_pred CCEEEEeCC
Q 026853 185 GMEVVAVPS 193 (232)
Q Consensus 185 G~~~i~v~~ 193 (232)
.|++.-++.
T Consensus 444 n~PfwrI~~ 452 (468)
T KOG3107|consen 444 NMPFWRISS 452 (468)
T ss_pred CCceEeecc
Confidence 999888876
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=89.15 E-value=9.2 Score=29.87 Aligned_cols=100 Identities=9% Similarity=0.116 Sum_probs=70.3
Q ss_pred CCCCCcHHHHHHHHHhC---CCCEEEEeCCchHHHHHHHhhhcCCccccceeec-cccc--CCCCCCHHHHHHHHHhcCC
Q 026853 90 VKALPGANRLIKHLSCH---GVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEV--RTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~---g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~-~~~~--~~~kp~~~~~~~~~~~~~~ 163 (232)
..+.|+..++++..+.. |+.+.++++.+....++.. .+|. -.+.. ...+ +.+-.+|+.++.+.+...+
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~--~~g~----~avmPl~~pIGsg~gv~~p~~i~~~~e~~~v 250 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE--DAGA----VAVMPLGAPIGSGLGIQNPYTIRLIVEGATV 250 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--hcCC----EEEeeccccccCCCCCCCHHHHHHHHHcCCC
Confidence 34678898998887776 9999788888777666443 3454 11111 2222 2344588999999998554
Q ss_pred CCCcEEEEeCch---hhhhhhhhcCCEEEEeCCCCCccc
Q 026853 164 EPSSSLVIEDSV---IGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 164 ~~~~~~~vgD~~---~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
+ +.+|-+. +|+..|-++|...++++++-....
T Consensus 251 p----VivdAGIg~~sda~~AmelGadgVL~nSaIa~a~ 285 (326)
T PRK11840 251 P----VLVDAGVGTASDAAVAMELGCDGVLMNTAIAEAK 285 (326)
T ss_pred c----EEEeCCCCCHHHHHHHHHcCCCEEEEcceeccCC
Confidence 3 6677665 799999999999999999654433
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.01 E-value=0.57 Score=32.41 Aligned_cols=17 Identities=47% Similarity=0.509 Sum_probs=15.0
Q ss_pred ccccEEEEeCCCccccc
Q 026853 7 KLMSCVILDLDGTLLNT 23 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~ 23 (232)
..+|++++|+|+||+..
T Consensus 26 ~Gikgvi~DlDNTLv~w 42 (175)
T COG2179 26 HGIKGVILDLDNTLVPW 42 (175)
T ss_pred cCCcEEEEeccCceecc
Confidence 46899999999999965
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=88.91 E-value=0.95 Score=33.97 Aligned_cols=39 Identities=15% Similarity=0.327 Sum_probs=32.6
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
.+...+.|++|+++|+.++++|+++...+...+ +.+++.
T Consensus 18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR00099 18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNIL-KELGLD 56 (256)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCC
Confidence 345668899999999999999999998888777 777765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.43 E-value=0.89 Score=34.49 Aligned_cols=41 Identities=7% Similarity=0.072 Sum_probs=33.7
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 134 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~ 134 (232)
.+..++.|++|+++|+.+++.|+++...+...+ +.+++..+
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~~ 61 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGRHVLEMQHIL-GALSLDAY 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCc
Confidence 344568899999999999999999999888887 77777543
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=88.31 E-value=0.41 Score=34.61 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=14.5
Q ss_pred ccccEEEEeCCCcccc
Q 026853 7 KLMSCVILDLDGTLLN 22 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~ 22 (232)
..+|+|++|+|.||+.
T Consensus 41 ~GIk~Va~D~DnTlI~ 56 (219)
T PTZ00445 41 CGIKVIASDFDLTMIT 56 (219)
T ss_pred cCCeEEEecchhhhhh
Confidence 3689999999999997
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.29 E-value=0.33 Score=38.22 Aligned_cols=30 Identities=30% Similarity=0.466 Sum_probs=18.4
Q ss_pred ccEEEEeCCCccc----ccHH-HHHHHHHHHHHHc
Q 026853 9 MSCVILDLDGTLL----NTDG-MFSEVLKTFLVKY 38 (232)
Q Consensus 9 ~k~i~fDlDGTL~----~~~~-~~~~~~~~~~~~~ 38 (232)
-.++++|+||||+ +.+. ........+++++
T Consensus 98 ~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~L 132 (354)
T PLN02151 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKL 132 (354)
T ss_pred ceEEEEecCccCCCCCCCcccccCCHHHHHHHHHH
Confidence 3578899999999 3333 2334444455444
|
|
| >PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.26 E-value=8.6 Score=28.44 Aligned_cols=82 Identities=16% Similarity=0.302 Sum_probs=57.1
Q ss_pred CCCCEEEEeCCc---hHHHHHHHhhhc-CCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch--hhhh
Q 026853 106 HGVPMALASNSH---RATIESKISYQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV--IGVV 179 (232)
Q Consensus 106 ~g~~~~i~s~~~---~~~~~~~l~~~~-~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~--~Di~ 179 (232)
.++.+.+++.+. ++.+.....+.+ .|.+-|-.+++.. ..-|-|..-+++++..|++ |+.|||.+ -+-.
T Consensus 30 edI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN---~a~PGP~~ARE~l~~~~iP---~IvI~D~p~~K~~d 103 (277)
T PRK00994 30 EDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPN---PAAPGPKKAREILKAAGIP---CIVIGDAPGKKVKD 103 (277)
T ss_pred cCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCC---CCCCCchHHHHHHHhcCCC---EEEEcCCCccchHH
Confidence 378888888773 444443331221 4555555444443 3567788889999999985 89999999 4678
Q ss_pred hhhhcCCEEEEeCC
Q 026853 180 AGKAAGMEVVAVPS 193 (232)
Q Consensus 180 ~a~~~G~~~i~v~~ 193 (232)
..++.|+..|.+..
T Consensus 104 ~l~~~g~GYIivk~ 117 (277)
T PRK00994 104 AMEEQGLGYIIVKA 117 (277)
T ss_pred HHHhcCCcEEEEec
Confidence 88899998888875
|
|
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=88.17 E-value=5 Score=29.64 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=60.1
Q ss_pred CCCCCcHHHHHH---HHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-cccCCCCCCHHHHHHHHHhcCCCC
Q 026853 90 VKALPGANRLIK---HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 90 ~~~~~~~~~~l~---~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
..+.|+..++++ .|.+.|+.+.-+++.+.-..+ .| ...|..... ...+ -..+.+-.++..++.++++.+++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~ak-rL-~d~GcaavM--PlgsPIGSg~Gi~n~~~l~~i~~~~~vP- 177 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RL-EDAGCAAVM--PLGSPIGSGRGIQNPYNLRIIIERADVP- 177 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHH-HH-HHTT-SEBE--EBSSSTTT---SSTHHHHHHHHHHGSSS-
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHH-HH-HHCCCCEEE--ecccccccCcCCCCHHHHHHHHHhcCCc-
Confidence 346788877775 466789999999999887665 44 455643211 0111 12245667889999999999886
Q ss_pred CcEEEEeCch---hhhhhhhhcCCEEEEeCCC
Q 026853 166 SSSLVIEDSV---IGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 166 ~~~~~vgD~~---~Di~~a~~~G~~~i~v~~~ 194 (232)
+.|+-+. +|...|-++|...+++|+.
T Consensus 178 ---vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 178 ---VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp ---BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred ---EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 5555554 8999999999999999984
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=88.08 E-value=9.1 Score=28.72 Aligned_cols=99 Identities=12% Similarity=0.086 Sum_probs=70.0
Q ss_pred CCCCCcHHHHHHH---HHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 90 VKALPGANRLIKH---LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 90 ~~~~~~~~~~l~~---l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
..+.|+..++++. |-+.|+.+.-+++.+.-..+ .| +..|..... ..-| ..+.+-.++..++.+++..+++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~-rL-ed~Gc~aVMPlgsPI---GSg~Gl~n~~~l~~i~e~~~vp 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAK-HL-EDIGCATVMPLGSPI---GSGQGLQNLLNLQIIIENAKIP 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHH-HH-HHcCCeEEeeccCcc---cCCCCCCCHHHHHHHHHcCCCc
Confidence 3467888777754 66789999999999887665 44 455643211 1111 2245667889999999987765
Q ss_pred CCcEEEEeCch---hhhhhhhhcCCEEEEeCCCCCc
Q 026853 165 PSSSLVIEDSV---IGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 165 ~~~~~~vgD~~---~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
+.+|-+. +|+..|-++|...++++++-..
T Consensus 192 ----VivdAGIgt~sDa~~AmElGaDgVL~nSaIak 223 (267)
T CHL00162 192 ----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQ 223 (267)
T ss_pred ----EEEeCCcCCHHHHHHHHHcCCCEEeecceeec
Confidence 6666554 7999999999999999996443
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.06 E-value=1 Score=34.04 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.|++++++|+++++.|+++...+...+ +.+++..
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 60 (266)
T PRK10976 22 PYAKETLKLLTARGIHFVFATGRHHVDVGQIR-DNLEIKS 60 (266)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HhcCCCC
Confidence 44568899999999999999999999888777 7777754
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=87.92 E-value=1.3 Score=33.31 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=31.8
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
...+.++.|++.|++++++|+++...+...+ +.+++.
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLR-KELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 3568899999999999999999999888888 777765
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=87.90 E-value=1.1 Score=32.86 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=30.8
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
.+...+.|+++++.|++++++|+++...+...+ +.+++.
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~-~~l~~~ 55 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALA-KLIGTP 55 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCC
Confidence 344567788899999999999999988887776 667754
|
catalyze the same reaction as SPP. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.71 E-value=1.2 Score=33.63 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=35.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+..++.|++++++|++++++|+++...+...+ +.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~-~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSIL-EELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCc
Confidence 4556678899999999999999999998888888 8888875
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.42 E-value=1.3 Score=33.56 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=32.8
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
.|...+.|.+++++|+.+++.|+++...+...+ +.+++..
T Consensus 22 ~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 61 (272)
T PRK10530 22 LPESLEALARAREAGYKVIIVTGRHHVAIHPFY-QALALDT 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HhcCCCC
Confidence 344568899999999999999999998888777 7777653
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=86.71 E-value=1.6 Score=33.44 Aligned_cols=39 Identities=23% Similarity=0.252 Sum_probs=33.0
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+.+.|++|+++|+++++.|+.+...+.... +.+++..
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~-~~Lgl~~ 59 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSLRTRAQLEHLC-RQLRLEH 59 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCC
Confidence 44678899999999999999999999888777 7788764
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.32 E-value=14 Score=28.84 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=55.2
Q ss_pred cCCCCCcHHHHHHHHHhCC-CCEEEEeCCchHHHH---HHHhhhcCC----------ccccceeecccccCCCCCCHHHH
Q 026853 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIE---SKISYQHGW----------NESFSVIVGSDEVRTGKPSPDIF 154 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~---~~l~~~~~l----------~~~~~~~~~~~~~~~~kp~~~~~ 154 (232)
...++||+..+.+.|.+.| .++..+||++-.... +.+ ...++ ...++.++.+.... +...+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi-~~~~~P~GPl~L~~~g~~~~~i~~sga~r----K~~~l 268 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFI-TNRNFPYGPLLLRRWGGVLDNIIESGAAR----KGQSL 268 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHH-hcCCCCCCchhHhhcCCcccccccchhhh----cccHH
Confidence 4578999999999999987 899999999876543 222 21111 12234444333222 23345
Q ss_pred HHHHHhcCCCCCcEEEEeCch-hhhhhh
Q 026853 155 LEAAKRLNMEPSSSLVIEDSV-IGVVAG 181 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~-~Di~~a 181 (232)
..+++++. ....+.|||+- .|.+.-
T Consensus 269 ~nil~~~p--~~kfvLVGDsGE~DpeIY 294 (373)
T COG4850 269 RNILRRYP--DRKFVLVGDSGEHDPEIY 294 (373)
T ss_pred HHHHHhCC--CceEEEecCCCCcCHHHH
Confidence 55666654 45689999998 687753
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=86.12 E-value=1.4 Score=32.64 Aligned_cols=40 Identities=18% Similarity=0.326 Sum_probs=34.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
+.+...+.|+.|+++|+.+++.|+++...+...+ ..+++.
T Consensus 16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~-~~~~~~ 55 (254)
T PF08282_consen 16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLL-KELGID 55 (254)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHH-HHTTHC
T ss_pred eCHHHHHHHHhhcccceEEEEEccCccccccccc-ccccch
Confidence 4567788999999999999999999999988888 777765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=85.38 E-value=13 Score=27.73 Aligned_cols=99 Identities=12% Similarity=0.150 Sum_probs=66.4
Q ss_pred CCCCCcHHHHHHHHHhC---CCCEEEEeCCchHHHHHHHhhhcCCccc--cceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 90 VKALPGANRLIKHLSCH---GVPMALASNSHRATIESKISYQHGWNES--FSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~---g~~~~i~s~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
..+.|+..++++..+.. |+.+.-+++.+....++.. .+|.... ....+++. .+..+++.++.+.+..+++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~--~~G~~~vmPlg~pIGsg---~Gi~~~~~I~~I~e~~~vp 177 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLE--DAGCAAVMPLGSPIGSG---QGLLNPYNLRIIIERADVP 177 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--HcCCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhCCCc
Confidence 34688999999887776 9988867777777665443 3453222 11223322 3445688888887775543
Q ss_pred CCcEEEEeCc---hhhhhhhhhcCCEEEEeCCCCCc
Q 026853 165 PSSSLVIEDS---VIGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 165 ~~~~~~vgD~---~~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
+.+|=+ +.|+..+-++|...++++++-..
T Consensus 178 ----VI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 178 ----VIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 455543 47999999999999999996554
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.67 E-value=2.2 Score=32.74 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=32.2
Q ss_pred cCCCCCcHHHHHHHHHhCC-CCEEEEeCCchHHHHHHH
Q 026853 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKI 125 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l 125 (232)
...++|.+.++++.+++.| .+++++||+..+.+.+.+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L 127 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEEL 127 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHh
Confidence 5678999999999999999 799999999997666555
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=84.44 E-value=2 Score=32.63 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
+..++.|.+|+++|+++++.|+++...+...+ +.+++.
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~-~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQ-QTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHhCCC
Confidence 34567899999999999999999999988888 778874
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=84.10 E-value=0.67 Score=31.62 Aligned_cols=15 Identities=40% Similarity=0.713 Sum_probs=13.1
Q ss_pred cEEEEeCCCcccccH
Q 026853 10 SCVILDLDGTLLNTD 24 (232)
Q Consensus 10 k~i~fDlDGTL~~~~ 24 (232)
+.+++|+||||+.+.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 578999999999873
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.44 E-value=0.78 Score=32.73 Aligned_cols=49 Identities=12% Similarity=-0.043 Sum_probs=30.9
Q ss_pred CCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch----hhhhhh
Q 026853 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV----IGVVAG 181 (232)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~----~Di~~a 181 (232)
|+.-.+...++-+..+.+..+...++++-.. + -+++-||||.. ||.+..
T Consensus 174 gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--f~~IhFFGDkT~~GGNDyEIf 226 (252)
T KOG3189|consen 174 GLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--FDTIHFFGDKTMPGGNDYEIF 226 (252)
T ss_pred CeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--CceEEEeccccCCCCCcceee
Confidence 4444455566667777777766666665544 3 46788999965 565543
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.95 E-value=1.6 Score=38.86 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=30.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
++.+..+..+++|.+.+++.+.+|+..-...-..- +..|+-
T Consensus 705 kLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVa-keCgmi 745 (1140)
T KOG0208|consen 705 KLKEETKRVIDELNRANIRTVMCTGDNLLTAISVA-KECGMI 745 (1140)
T ss_pred ccccccHHHHHHHHhhcceEEEEcCCchheeeehh-hccccc
Confidence 46678889999999999999999998766544444 445543
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=82.71 E-value=3.2 Score=35.43 Aligned_cols=55 Identities=18% Similarity=0.093 Sum_probs=42.5
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCC-cccc-ceeecccccC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESF-SVIVGSDEVR 145 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l-~~~~-~~~~~~~~~~ 145 (232)
.+++.|++.+||+.+.+. +.+.|+|-+.+.++...+ +.+.- ..+| |.|++.++-.
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~-~liDP~~~lF~dRIisrde~~ 255 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIA-KLIDPEGKYFGDRIISRDESP 255 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHH-HHhCCCCccccceEEEecCCC
Confidence 467899999999999988 999999999999887776 54432 2345 6677777733
|
|
| >PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=82.60 E-value=0.99 Score=25.54 Aligned_cols=26 Identities=8% Similarity=0.121 Sum_probs=16.6
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhh
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~ 182 (232)
-+++.++++|+ .+++||...|+++..
T Consensus 6 DVqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 6 DVQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 35778899997 699999999999865
|
; PDB: 2NN4_A. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=81.86 E-value=0.87 Score=31.65 Aligned_cols=14 Identities=43% Similarity=0.764 Sum_probs=12.6
Q ss_pred cEEEEeCCCccccc
Q 026853 10 SCVILDLDGTLLNT 23 (232)
Q Consensus 10 k~i~fDlDGTL~~~ 23 (232)
+.+++|+|+||+.+
T Consensus 2 ~~lvlDLDeTLi~~ 15 (162)
T TIGR02251 2 KTLVLDLDETLVHS 15 (162)
T ss_pred cEEEEcCCCCcCCC
Confidence 57999999999977
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR00190 thiC thiamine biosynthesis protein ThiC | Back alignment and domain information |
|---|
Probab=81.64 E-value=8.4 Score=30.91 Aligned_cols=56 Identities=9% Similarity=0.073 Sum_probs=43.1
Q ss_pred ccHHhHHHHHHHHHHhhhccCCCCCcH-HHHHHHHHhCCCCEEEEeCCchHHHHHHH
Q 026853 70 CAKHEFVNEVYSMFSDHLCKVKALPGA-NRLIKHLSCHGVPMALASNSHRATIESKI 125 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 125 (232)
.+.+++.+.+.++.++....+.+.-|+ ++.++.+++.+..+.|||-+......+.+
T Consensus 137 mt~d~~~~~ie~qa~dGVDfmTiH~Gi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~ 193 (423)
T TIGR00190 137 MDEDDMFRAIEKQAKDGVDFMTIHAGVLLEYVERLKRSGRITGIVSRGGAILAAWML 193 (423)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhCCCccCeecCcHHHHHHHHH
Confidence 556777777777777776677777775 78889999888888999988877766665
|
The thiC ortholog is designated thiA in Bacillus subtilis. |
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=81.51 E-value=20 Score=26.87 Aligned_cols=98 Identities=11% Similarity=0.148 Sum_probs=65.2
Q ss_pred CCCCcHHHHHHHHHhC---CCCEEEEeCCchHHHHHHHhhhcCCccc--cceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 91 KALPGANRLIKHLSCH---GVPMALASNSHRATIESKISYQHGWNES--FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~---g~~~~i~s~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.+.|+..++++..+.. |+.+.-+++.+.....+. ..+|..-. ....|++. .+..+++.++.+.+..+++
T Consensus 104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l--~~~G~~~vmPlg~pIGsg---~gi~~~~~i~~i~e~~~vp- 177 (250)
T PRK00208 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRL--EEAGCAAVMPLGAPIGSG---LGLLNPYNLRIIIEQADVP- 177 (250)
T ss_pred CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH--HHcCCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhcCCe-
Confidence 4678888998887776 998885777766666544 34453222 11223322 3444578888887775543
Q ss_pred CcEEEEeCch---hhhhhhhhcCCEEEEeCCCCCc
Q 026853 166 SSSLVIEDSV---IGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 166 ~~~~~vgD~~---~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
+.+|=+. .|+..+-++|...++++++-..
T Consensus 178 ---VIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 178 ---VIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ---EEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 5555443 7999999999999999996554
|
|
| >PRK13352 thiamine biosynthesis protein ThiC; Provisional | Back alignment and domain information |
|---|
Probab=81.48 E-value=8.5 Score=31.02 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=43.3
Q ss_pred ccHHhHHHHHHHHHHhhhccCCCCCcH-HHHHHHHHhCCCCEEEEeCCchHHHHHHH
Q 026853 70 CAKHEFVNEVYSMFSDHLCKVKALPGA-NRLIKHLSCHGVPMALASNSHRATIESKI 125 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 125 (232)
.+.+++.+.+.++..+....+.+.-|+ ++.++.+++.+..+.|||-+......+.+
T Consensus 140 mt~d~~~~~ie~qa~~GVDfmTiHcGi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~ 196 (431)
T PRK13352 140 MTEDDLFDVIEKQAKDGVDFMTIHCGVTRETLERLKKSGRIMGIVSRGGSFLAAWML 196 (431)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccchhHHHHHHHHhcCCccCeecCCHHHHHHHHH
Confidence 556777777777777777777777774 78889998888888999988877766665
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=81.36 E-value=1 Score=33.37 Aligned_cols=11 Identities=55% Similarity=0.751 Sum_probs=7.5
Q ss_pred EEeCCCccccc
Q 026853 13 ILDLDGTLLNT 23 (232)
Q Consensus 13 ~fDlDGTL~~~ 23 (232)
+||+||||.+.
T Consensus 1 ~lDyDGTL~p~ 11 (235)
T PF02358_consen 1 FLDYDGTLAPI 11 (235)
T ss_dssp EEE-TTTSS--
T ss_pred CcccCCccCCC
Confidence 68999999965
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=80.40 E-value=7.1 Score=31.14 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=59.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHH------------HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRAT------------IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~------------~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~ 158 (232)
.+++.+..=++.|.+.|+.++|.||..... +.... ..+++ .|........-...||...+.+...
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~v--Pi~~~~A~~~~~yRKP~tGMwe~~~ 180 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGV--PIQLLAAIIKGKYRKPSTGMWEFLK 180 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCC--ceEEeeeccCCcccCcchhHHHHHH
Confidence 456666777999999999999999874211 22222 22333 2222222223357899999998888
Q ss_pred HhcC----CCCCcEEEEeCc---------------hhhhhhhhhcCCE
Q 026853 159 KRLN----MEPSSSLVIEDS---------------VIGVVAGKAAGME 187 (232)
Q Consensus 159 ~~~~----~~~~~~~~vgD~---------------~~Di~~a~~~G~~ 187 (232)
+.++ +.-...+|+||- ..|+..|.++|+.
T Consensus 181 ~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvk 228 (422)
T KOG2134|consen 181 RLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVK 228 (422)
T ss_pred HHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCc
Confidence 7765 333345577762 2578889999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 232 | ||||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 3e-31 | ||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 3e-11 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 1e-10 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 4e-10 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 4e-09 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 2e-08 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 3e-08 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 3e-08 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 5e-08 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-07 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 2e-07 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 2e-07 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 2e-07 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-07 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 4e-07 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 2e-06 | ||
| 2fdr_A | 229 | Crystal Structure Of Conserved Haloacid Dehalogenas | 4e-06 | ||
| 3kzx_A | 231 | Crystal Structure Of A Had-Superfamily Hydrolase Fr | 2e-05 | ||
| 2yy6_A | 213 | Crystal Structure Of The Phosphoglycolate Phosphata | 7e-05 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 1e-04 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 3e-04 | ||
| 2hdo_A | 209 | Crystal Structure Of Putative Phosphoglycolate Phos | 3e-04 |
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229 | Back alignment and structure |
|
| >pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231 | Back alignment and structure |
|
| >pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
| >pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 258 bits (660), Expect = 2e-87
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA P + + + +I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A
Sbjct: 23 MAAPPQPV-THLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQ 81
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
II++ LP +K E V E + + +PGA +LI HL HG+P ALA++S A+
Sbjct: 82 IIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSAS 141
Query: 121 IESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVI 176
+ K S + FS IV D EV+ GKP PDIFL AKR + P+ LV ED+
Sbjct: 142 FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPN 201
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
GV A AAGM+VV VP T A V+NSL D +PE +GLP ++
Sbjct: 202 GVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 1e-67
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++ +I D+DG L +T+ + + +FL + G D +G + I+ D
Sbjct: 2 NAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRD 61
Query: 66 YGLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E + ++ K P +++ + G+ + LAS+S +A I
Sbjct: 62 EYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFR 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ ++ F +++ +E + KP+P+I+L A K+LN++ S +L+IEDS G+ AG A
Sbjct: 122 ALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
A +EV A+ + +AA +++SL D+
Sbjct: 181 ADVEVWAIRD-NEFGMDQSAAKGLLDSLTDV 210
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 3e-65
Identities = 48/213 (22%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
V+ D+DG L ++ +E + ++G E + G+T I+ A
Sbjct: 26 VLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDA 85
Query: 72 KHEFVNEVYSMFSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E + +Y ++ K + +PGA ++ + G+ + + S + ++ ++++
Sbjct: 86 TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHN 145
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+++V + +V+ GKP+P+ +L A K+ +P+ +LVIE++ +GV AG AAG+
Sbjct: 146 FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFT 205
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDLRPEKW 219
+AV + L A+ + +S+ D + W
Sbjct: 206 IAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNW 237
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 1e-61
Identities = 50/218 (22%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
++K + V+ D+DG L N+ SE + +G + E + G+T I
Sbjct: 17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + A E + +Y S + + +PGA L++ + G+ + + S +
Sbjct: 77 VFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ ++ + ++V + +V+ GKP+P+ +L A K+ ++ ++VIE++ +GV
Sbjct: 137 LSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGV 196
Query: 179 VAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
AG AG+ +AV + L Q AD + S+ L
Sbjct: 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 1e-60
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP- 69
I D+DG L++++ ++ + G + R + +G +
Sbjct: 12 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 71
Query: 70 CAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
++ E V V + + + LPG + G+ + LAS S +E ++
Sbjct: 72 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT-M 130
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M
Sbjct: 131 FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 190
Query: 189 VAVPSLPKQTH-RYTAADEVINSLLDLRPEK 218
+ VP+ Q R+ A+ ++SL +L +
Sbjct: 191 IVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 7e-60
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYG 67
V+ DLDG L+ ++G+ ++V ++ L + G D E G+ A + + +
Sbjct: 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHD 87
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
+F++ + + F+ + V A+ GA ++ L GVP A+ SNS R + K+
Sbjct: 88 FVPP-PDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR- 145
Query: 128 QHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
G E + S GKP PD++ AA++L + P +VIEDSV G AG AAG
Sbjct: 146 VAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAG 205
Query: 186 MEVVAV--PSLPKQTH----RYTAADEVINSLLDLRP--EKWGLP 222
+ + P P A V+ S +LR + GL
Sbjct: 206 ATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLL 250
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 6e-56
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ G + + I++
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV 64
Query: 71 AKHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ EF N+ Y + PG +L+K L + + +ALAS S +
Sbjct: 65 SAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLE 124
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K +
Sbjct: 125 ---RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
G + V ++ E
Sbjct: 182 GALPIGVGR----PEDLGDDIVIVPDTSHYTLEF 211
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 3e-55
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + +D ++ G + E I+ G
Sbjct: 5 VIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETK 64
Query: 72 -----KHEFV---NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
K E + N Y M L LPG RL+ L + + LAS+S A
Sbjct: 65 YTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP--- 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
KI + + F IV + GKP PDIFL AA L++ P+ IED+ G+ A K+
Sbjct: 122 KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS 181
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
AGM V V AD V+ DL E
Sbjct: 182 AGMFAVGVGQ----GQPMLGADLVVRQTSDLTLEL 212
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 5e-53
Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 12/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
I DLDGTL ++ K L H+ +G + + + G+
Sbjct: 9 FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSIT 68
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
+ + Y + ALPGA L++ L + +A++ T +
Sbjct: 69 DEQAERLSEKHAQAYERLQHQ---IIALPGAVELLETLDKENLKWCIATSGGIDTATINL 125
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
+ + IV D+V GKP PD+FL AAK++ LVI D++ ++A +
Sbjct: 126 K-ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184
Query: 186 MEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
V + S A V LDL
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDLLN 217
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 6e-53
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 9 MS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVE 64
MS +I D DG L++++ + ++V L + G E + G T +
Sbjct: 1 MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES 60
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ +P +++ + L + VK + G + L P + SNS ++
Sbjct: 61 EASIP-LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDM 116
Query: 124 KISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
++ + G F+ + S + KP PDIFL A + + P +V+EDSV G+
Sbjct: 117 MLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHG 175
Query: 181 GKAAGMEVVAVPSLP------KQTHRYTAADEVINSLLDLRPEKWG 220
+AAGM V+ A+ VI+ + DL P
Sbjct: 176 ARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIA 220
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 4e-52
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 21/226 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M L+ VI DLDG + +T + + + + G D + + G + E
Sbjct: 1 MVMKLQ----GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLR 56
Query: 61 IIVEDYGLP--------CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
I++ G N +Y L LPG L+ L + + L
Sbjct: 57 RILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
AS S A E F+ + +++ KP P+IFL A L + P + + IE
Sbjct: 117 ASVSLNAPTILA---ALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIE 173
Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
D+ G+ A A+GM V + + T A ++ S L +
Sbjct: 174 DAQAGIDAINASGMRSVGIGA------GLTGAQLLLPSTESLTWPR 213
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 5e-52
Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 14/227 (6%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
+PL ++ + D+DGT++ + + + F H G + A
Sbjct: 28 TKPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAK 87
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALASNSHRAT 120
D+ ++ E+ + +H +PGA +L L+ A+A++ R
Sbjct: 88 FAPDFADEEYVNKLEGEIPEKYGEH---SIEVPGAVKLCNALNALPKEKWAVATSGTRDM 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-------MEPSSSLVIED 173
+ + + +++V+ GKP P+ +L+ L S +V ED
Sbjct: 145 AKKWF--DILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 202
Query: 174 SVIGVVAGKAAGMEVVAVPS-LPKQTHRYTAADEVINSLLDLRPEKW 219
+ G+ AGKAAG ++V + + + D ++ + +R ++
Sbjct: 203 APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-36
Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 16/201 (7%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ +ILD GT ++ + + G E E + +G E ++ +
Sbjct: 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSR 73
Query: 68 LP---------CAKHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALA 113
+ + E + +Y +F+ + + +PG + L G+ +
Sbjct: 74 IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGN 133
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIE 172
+ + + + + V + +V G+P PD+ L+ A L + + + ++
Sbjct: 134 TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVD 193
Query: 173 DSVIGVVAGKAAGMEVVAVPS 193
D++ G+ G AGM V V
Sbjct: 194 DTLPGIEEGLRAGMWTVGVSC 214
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-32
Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 43/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL- 68
VI GT ++ EV K G E K +G ++ + E +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67
Query: 69 --------PCAKHEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASN 115
+ E+Y F + L + G +I L G+ + +
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 116 SHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIED 173
R ++ + +V D+V G+P P + + A L + P + + + D
Sbjct: 128 YTREMMDIVAK-EAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186
Query: 174 SVIGVVAGKAAGMEVVAVPS-------LPKQTHRYTA------------------ADEVI 208
+V + G+ AGM V V ++ + A I
Sbjct: 187 TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246
Query: 209 NSLLDLRP 216
++ +L
Sbjct: 247 ETMQELES 254
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 8e-32
Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 14/189 (7%)
Query: 7 KLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
K M I DL GTLL+ + L YG D ++ + + +E
Sbjct: 2 KGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVS----TPFAIE 57
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ E E Y G + L++ +S G L S+ + +E
Sbjct: 58 TFA---PNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE- 113
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
I + F+ +V S KP+P+ L ++ + LVI D I + AG+A
Sbjct: 114 -ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQA 170
Query: 184 AGMEVVAVP 192
AG++
Sbjct: 171 AGLDTHLFT 179
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-32
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Query: 12 VILDLDGTLLNT-DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
VI D TL++T + L + G + + + + + + I +
Sbjct: 28 VIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDS---IPNSTIPKYLITLLGKRWKE 84
Query: 71 AKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
A + N + S SD+ GA L+ L + + MA+ SN + + +
Sbjct: 85 ATILYENSLEKSQKSDN---FMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHK 140
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEV 188
F I+GS + T KPSP+ L A +N+EPS I DS+ + + AG
Sbjct: 141 NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP 200
Query: 189 VAVP--SLPKQTHRYTAADEVINSLLDL 214
+ ++ K + ++ N + L
Sbjct: 201 IKYGSTNIIKDILSFKNFYDIRNFICQL 228
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-31
Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 15/208 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPC 70
I DLDGTLL++ ++ ++ +D + + + K +++ + ED L
Sbjct: 7 FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL-- 64
Query: 71 AKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQ 128
E +N+V + +V +PGA ++ G+ + ++ + A I
Sbjct: 65 -DVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF---TILKD 120
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F+ I+ S KPSP+ + + ++ I D + V + +G++
Sbjct: 121 LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 180
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRP 216
+ + I +L D+
Sbjct: 181 INF------LESTYEGNHRIQALADISR 202
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 1e-30
Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 19/224 (8%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLP 69
+ D D TL ++ ++ L ++G + + +GK LEE+ I+
Sbjct: 8 VYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGK-TLEESFSIL----TG 62
Query: 70 CAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIES 123
+ + +S P + HL G+ + + S +
Sbjct: 63 ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL-- 120
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
H ++ F +I+G ++V KP P+ L A RL P L I DS + A
Sbjct: 121 SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180
Query: 184 AGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 222
AG+ V S Q + D +I++L L +K G P
Sbjct: 181 AGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-30
Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP 69
++ D+DGTL N+ ++ V++ L YGK + + K + E G+
Sbjct: 6 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA----EQAMTE-LGIA 60
Query: 70 CAKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISY 127
++ + Y + + H +++ PG L + L + + + ++
Sbjct: 61 ASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQRRNELE--SGMR 117
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
+ + +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 118 SYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177
Query: 188 VVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
P H+ LD+
Sbjct: 178 FGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-28
Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 17/224 (7%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 4 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHG-VPMALASNSH 117
GL A+ + ++ + + L G L+ LS V + L + +
Sbjct: 61 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 120
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDS 174
A+ K+ G + F +D+ P I LE A+R+ N PS ++I D+
Sbjct: 121 EASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDT 179
Query: 175 VIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
+ + +AV + + + + +
Sbjct: 180 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 9e-28
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 24/226 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG---------------KEWDGREKHKIVGKTP 55
V D+ TLL+ + M E G + R + +
Sbjct: 6 LVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKV 65
Query: 56 LEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L + + + E V + ++ + L G ++ + G+ A+
Sbjct: 66 LTGSQEALAGKLKVD---VELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIG 122
Query: 115 N---SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N + + + G E +DEV + KP ++F + ++P SL I
Sbjct: 123 NVMFWPGSYTRLLLE-RFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI 181
Query: 172 EDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
D+ + GM V + + + I S+ +L+
Sbjct: 182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKD 227
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-27
Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 21/220 (9%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GKTPLEEA 59
+ DLD TL++T + K + + + +
Sbjct: 5 IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFD- 63
Query: 60 AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHR 118
++ LP ++++ + + ++ +PGA +++ L G + + ++ +
Sbjct: 64 -YLLRRLDLP-YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
KI + ++ F ++ SD KP P IF +A K N++P +L++ D +
Sbjct: 122 VKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSD 180
Query: 178 VVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 214
+ K GM+ V ++ AD I++L L
Sbjct: 181 IYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-27
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
L + V+ DLDGTL ++ ++ +K L K+ + + +K VG PL+ + +E
Sbjct: 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGP-PLKTS--FMEY 58
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
Y E + D+ + + K G L+ L +G + +A++
Sbjct: 59 YNFD---EETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVF 115
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
+ +I F IVGS D+ A + LN++ +++I D V+
Sbjct: 116 SK--QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVI 173
Query: 180 AGKAAGMEVVAV 191
+ + V
Sbjct: 174 GALKNNLPSIGV 185
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-26
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 22/206 (10%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+DGTL F+ + + + + P +E+A A
Sbjct: 9 WVFDMDGTLTIAVHDFAAIREAL----SIPAEDDILTHLAA-LPADESA----------A 53
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
KH ++ E + + PGA L++ L+ G + + + + R + G
Sbjct: 54 KHAWLLEHERDLAQGS---RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLE-AIGL 109
Query: 132 NESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ F+ V + KP P L+ A+ ++ PS +++ D + G+AAG V
Sbjct: 110 ADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169
Query: 191 VPSLPKQTHRYTAADEVINSLLDLRP 216
V D LR
Sbjct: 170 VN--LPDNPWPELTDWHARDCAQLRD 193
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-25
Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 34/217 (15%)
Query: 9 MSCVILDLDGTLLNTDG----------MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE 58
+ + D+ G LL F F ++ E G+ L E
Sbjct: 4 IKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELEL----GRMTLAE 59
Query: 59 A-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
+V +F + + P L + L M +N
Sbjct: 60 YLEQVVFYQPRDFTPEDFRAVMEEQS-------QPRPEVLALARDLG-QRYRMYSLNNEG 111
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E +I G E S + KP+P ++ + P +++++D +
Sbjct: 112 RDLNEYRIR-TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQN 170
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
V A +A GM + A ++ L L
Sbjct: 171 VQAARAVGM----------HAVQCVDAAQLREELAAL 197
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 2e-25
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ L+ +GV + SN + I + N ++ S E+ KP
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPE 76
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
F AA +++ ++++DS++ V AG+ V + A I
Sbjct: 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVG 129
Query: 211 LLDLRPE 217
L L E
Sbjct: 130 LFGLEGE 136
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 5e-25
Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 31/234 (13%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG--------------------KEWDGREKHKI 50
+ D+ TLL E T +G +
Sbjct: 3 LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62
Query: 51 VGKTPLEEAAI--IVEDYGLPCAK--HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH 106
+ + G+ A+ ++Y FS C + L GA ++
Sbjct: 63 LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP-CTWQVLDGAEDTLRECRTR 121
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G+ +A+ SN +E + G E F ++ S+ KP P IF EA + +MEP
Sbjct: 122 GLRLAVISNFD-RRLEGILG-GLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV 179
Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINSLLDLRP 216
+ + D+ + +A GM V +L + ++ SL L P
Sbjct: 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-24
Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 24/217 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT------PLEEA----- 59
V++D TL+ +F E + L G + D R+ + K P E+
Sbjct: 5 AVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVD 64
Query: 60 -AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ G+ V E+ ++ L +G +AL SN+
Sbjct: 65 PKDFLYILGIY-PSERLVKELKEADIRDGE-AFLYDDTLEFLEGLKSNGYKLALVSNAS- 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
+++ + + + F + S E++ KP+P IF A ++ ++ + D
Sbjct: 122 PRVKTLLE-KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---AVHVGDIYELD 177
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ K + ++ + + + Y + + +L +
Sbjct: 178 YIGAKRSYVDPILL----DRYDFYPDVRDRVKNLREA 210
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 2e-24
Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 34/216 (15%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-------------WDGREKHKIVGKTPLEE 58
I DL +++ D F+ VL + + E+ +I +
Sbjct: 10 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEI---SDEAF 64
Query: 59 AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
A + + LP + +F + ++F P ++ L G + + SN++R
Sbjct: 65 AEALCHEMALPLSYEQFSHGWQAVFVA------LRPEVIAIMHKLREQGHRVVVLSNTNR 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ I S ++ KP I+ + PS ++ +D+ +
Sbjct: 119 LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNI 178
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
G+ + + + +
Sbjct: 179 EGANQLGI----------TSILVKDKTTIPDYFAKV 204
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 3e-24
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 22/217 (10%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYG 67
+ ++ DLDGTL+++ + L+ L + G E + K +G ++E
Sbjct: 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGG----VRALLEK-V 57
Query: 68 LPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATI 121
L +F E +F H + K P ++ L G +A+ SN +
Sbjct: 58 LK---DKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
KI + F +IVG D KPSP L+ + L EP +L++ D+ + AG
Sbjct: 115 --KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
K AG + + + D ++ DL
Sbjct: 173 KRAGTKTALALWGYVKLNSQI---PDFTLSRPSDLVK 206
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 3e-24
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 28/235 (11%)
Query: 6 KKLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------ 51
L V DLD TL++T G + + ++ +E+ +I+
Sbjct: 13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 72
Query: 52 ---GKTPLEEA-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKH 102
T + + +++ + E Y ++ + + ++
Sbjct: 73 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162
L V + L +N R T KI F IV E + KP+P IF L
Sbjct: 133 LR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG 190
Query: 163 MEPSSSLVIEDSVIG-VVAGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 214
++P +++ D++ + G AG++ V S +++S+L+L
Sbjct: 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 7e-24
Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M + + V+ DLDGTL + ++ ++ L +G + D + +G PL +
Sbjct: 25 MKKNYE----IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGP-PLHDT- 78
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN 115
E Y + E + ++ + + K +++ L +G + +A++
Sbjct: 79 -FKEYYKFE---DKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATS 134
Query: 116 -SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-EPSSSLVIED 173
I + F I GS+ T ++ N+ + +++ D
Sbjct: 135 KPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD 192
Query: 174 SVIGVVAGKAAGMEVVAV 191
++ K G++ + V
Sbjct: 193 RKYDIIGAKKIGIDSIGV 210
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 1e-23
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 36/223 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEE-AA 60
++ DL G L++ + E ++ F + + + G+ EE
Sbjct: 8 IVFDLGGVLIHLN--REESIRRFKAIGVADIE-EMLDPYLQKGLFLDLESGRKSEEEFRT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ G + + + + + + L SN++
Sbjct: 65 ELSRYIGKELTYQQVYDALLGFLEE-------ISAEKFDYIDSLRPDYRLFLLSNTNPYV 117
Query: 121 IESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
++ +S + + F + S ++ KP+ DIFLE M+P +L I+D
Sbjct: 118 LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGP 177
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
V + G T+ + I ++ L E+
Sbjct: 178 ANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 2e-23
Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIV----------GKTPLEE 58
++ D+D T+L+ + L+ D + ++K + GK +E
Sbjct: 9 TLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDE 68
Query: 59 A-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
+ ++++YG + Y F + ++ + GA LI +L + +
Sbjct: 69 VVNTRFSALLKEYGYEADGALL-EQKYRRFLEEGHQL--IDGAFDLISNLQ-QQFDLYIV 124
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
+N T ++ G F I S++ KP + F +R+ +L+I
Sbjct: 125 TNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIG 183
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
DS+ + G+ AG++ + K I L +L
Sbjct: 184 DSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 2e-23
Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 20/192 (10%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
++ + DLDGTL+++ + G + +G PLE +
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGP-PLESS---FAT 57
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
L + ++E ++ + + + + P L++ LS P+ + +
Sbjct: 58 C-LS---KDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELS-SSYPLYITTTKDTST 112
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
++ + F I GS D+ +A + + P +++I D+ ++
Sbjct: 113 AQ--DMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDML 168
Query: 180 AGKAAGMEVVAV 191
+ G++ +A+
Sbjct: 169 GARETGIQKLAI 180
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 3e-23
Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 14/218 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGK---TPLEEAAIIVEDY 66
+ DLDGTL+N+ + + + L +G + A
Sbjct: 25 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 84
Query: 67 GLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRAT 120
+ F + + P ++ L G +A+ +N +
Sbjct: 85 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I G + FS ++G + KP P F + + P L + DS + A
Sbjct: 145 Q--PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFA 202
Query: 181 GKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+AG VV + + D + + D+
Sbjct: 203 AHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 1e-22
Identities = 47/233 (20%), Positives = 81/233 (34%), Gaps = 30/233 (12%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG----------KEW--DGREK-------HKIV 51
I D+DGT+L+T + L + G K + G ++
Sbjct: 6 AAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAG 65
Query: 52 GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCH 106
A ++ VN V +F + K PG L+K+L
Sbjct: 66 SSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQK 125
Query: 107 GVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165
GV +A+ SN + A + + SF +G KP+PD+ E K L +
Sbjct: 126 GVKLAVVSNKPNEAVQVLV---EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPR 182
Query: 166 SSSLVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+ I DS I + + + M+ +AV + A ++++ L
Sbjct: 183 DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 2e-20
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149
+ PGA +K L G+P A A + ++ + G P
Sbjct: 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWP 88
Query: 150 SPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 192
PD A LN+ ++I + +G AG+ + +
Sbjct: 89 QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-20
Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 25/223 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG------------------KEWDGREKHKIVGK 53
V D GTL + +G LK G + +
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY--- 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMAL 112
PL + V ++ + + + L P ++K L + +
Sbjct: 62 RPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLK-GKYHVGM 120
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
++S + + G + F I S+E KP P IF A K+ ++ ++ +
Sbjct: 121 ITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVG 179
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + K GM + + ++ + D +++ L ++
Sbjct: 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 5e-19
Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 26/226 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--------------------WDGREKHKI 50
+ DLD T+ + + KY + W + K+
Sbjct: 7 NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVP 109
K L + F + K +P A ++++L+
Sbjct: 67 -TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYN 124
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + SN R K+ G + F I+ S+++ KP P+IF A E SL
Sbjct: 125 LYILSNGFRELQSRKMR-SAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183
Query: 170 VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I DS + GM + + I+SL +L
Sbjct: 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQ-PTYHIHSLKEL 228
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 2e-18
Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 36/216 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEEA-A 60
+++DL G L+N D ++ F K G + + G E
Sbjct: 31 LLIDLGGVLINLD--RERCIENFK-KIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRD 87
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I E G + + S D +P + + L SN++
Sbjct: 88 GIREMMGKMVSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVVYLLSNTNDIH 140
Query: 121 IE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
+ + + F S E++ KP P+IF + ++P + I+DS
Sbjct: 141 WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSE 200
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211
I + G+ T+ A ++ +
Sbjct: 201 INCKVAQELGI----------STYTPKAGEDWSHLF 226
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 78.7 bits (193), Expect = 3e-17
Identities = 30/245 (12%), Positives = 66/245 (26%), Gaps = 46/245 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA--------AIIV 63
+ LD + + +++ + + + K T +E +
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ + + ++ + L+ L G + +A+
Sbjct: 193 DVEK-----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 124 KISYQHGWNESFSV--IVGSDEVRT-----------GKPSPDIFLEAAKRLN-------- 162
G F I + +V GKP+P ++ A N
Sbjct: 248 PFE-NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306
Query: 163 ------MEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSL 211
+ ++ DS+ +++ + G + AD VIN L
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
Query: 212 LDLRP 216
+LR
Sbjct: 367 GELRG 371
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 4e-17
Identities = 44/234 (18%), Positives = 83/234 (35%), Gaps = 34/234 (14%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKE--------WDGREKHKIVGKT 54
K+L+ + D D TL + + F EV K + L YG +I+G
Sbjct: 5 KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYG 64
Query: 55 P------LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHG 107
+ E A+ + + + + + ++ + L ++ LPG +K L G
Sbjct: 65 AKAFTISMVETALQISNGKIA---ADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETG 121
Query: 108 -VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
+ +A+ E+K+ + G + F I + + +L L + PS
Sbjct: 122 KYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVMSD-----KTEKEYLRLLSILQIAPS 175
Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEV-----INSLLDL 214
L++ +S + + G V +P H T + L DL
Sbjct: 176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 3e-16
Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 17/216 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREK-------HKIVGK-TPLEEAA 60
+ DL GTL + + + F + W R+K ++ + ++A
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALW--RQKQLEYTWLRSLMNRYVNFQQAT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ + S D ++ ++ L G+ +A+ SN +
Sbjct: 65 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I++ +S+ G + F ++ D V+ KP ++ A + L ++ S+ L + +
Sbjct: 125 IDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATG 183
Query: 181 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
+ G + + D + SL +
Sbjct: 184 ARYFGFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 72.5 bits (177), Expect = 1e-15
Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 20/215 (9%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---EKHKIVGKTPLEEAAIIVEDYG 67
+ D D TLL+ D + +++ + ++G + R + + + ++ Y
Sbjct: 13 VFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYR 72
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
L + + + S D+ + PGA ++HL G P + S+ KI+
Sbjct: 73 LEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA- 130
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-GM 186
+ G + + ++ L+ ++++D + + A K A G
Sbjct: 131 RSGLWDEV------EGRVLIYIHKELMLDQVMEC-YPARHYVMVDDKLRILAAMKKAWGA 183
Query: 187 EVVAV-------PSLPKQTHRYTAADEVINSLLDL 214
+ V PK+ + AD + + DL
Sbjct: 184 RLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 2e-15
Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKH-------KIVGK-TPLEEAA 60
+ D GTLL+ W R++ ++ + +
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLW--RQRQLEYSWTRTLMHQYADFWQLT 74
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ L E + ++ A P A ++ L G +A+ SN +
Sbjct: 75 DEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEM 134
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+++ + + + +D+++ KP P I+ A RL + P+ + + +
Sbjct: 135 LQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGG 193
Query: 181 GKAAGMEVVAVP-SLPKQTHRYTAADEVINSLLDL 214
G V + + + +NSL +L
Sbjct: 194 AGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 69.8 bits (170), Expect = 2e-14
Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 18/230 (7%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTD-GMFSEV---LKTFLV-KYGKEWDG-REKHKIVGKT 54
A P + D+D L + + + + F + + K
Sbjct: 49 SATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKE 108
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL-- 112
+V + N + +K ++ L G L
Sbjct: 109 YGLAIRGLVMFHK---VNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWL 165
Query: 113 ---ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 168
A +H + ++ + KP F +A K + +
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENA 225
Query: 169 LVIEDSVIGVVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDLR 215
I+DS + G GM+ + + + VI+ +L+L
Sbjct: 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 2e-14
Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 33/234 (14%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEW-----------DGREKHK---IVGKT 54
V+ D GTL + + + + + + W ++ V +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L GL + F+ ++ ++ A L + A+ S
Sbjct: 65 ALAYTL---GTLGLEPDE-SFLADMAQAYNRLTPYPDAAQCLAEL------APLKRAILS 114
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174
N +++ ++ G +SF ++ D R KP PD + + L + P+ L + +
Sbjct: 115 NGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173
Query: 175 VIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
V K G V V +L ++ T A + L +R E + P
Sbjct: 174 GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 3e-14
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 6/136 (4%)
Query: 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVG 140
F+ K + ++ G+ + + S+ + + + E
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF- 180
Query: 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQT 198
D K + + + A + ++ L + D A + A + V V P T
Sbjct: 181 -DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLT 239
Query: 199 HRYTAADEVINSLLDL 214
+I S +L
Sbjct: 240 DDEKTYYSLITSFSEL 255
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 5e-14
Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 32/239 (13%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGR------------ 45
+AQ + + V D D TL ++ + F L Y D R
Sbjct: 5 IAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRN 64
Query: 46 -EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHL 103
+ K + + + + + L V+ + G + +
Sbjct: 65 LKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAI 124
Query: 104 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163
+ + L + E KI Q G ++ F I + P + ++
Sbjct: 125 A-ADYAVVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDL 177
Query: 164 EPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-------INSLLDL 214
++I +S+ V A G + P H +
Sbjct: 178 PAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 6e-13
Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 18/143 (12%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD--- 142
+V A ++ + G A+ SN S I+ ++ G + F I S+
Sbjct: 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSEL 90
Query: 143 -EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AV 191
+ KP IF L ++ + ++++ ++ ++ AG+ +
Sbjct: 91 QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150
Query: 192 PSLPKQTHRYTAADEVINSLLDL 214
LP + + + +
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEA 173
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 8e-13
Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-------------------KHKIVG 52
+ D GTL++ + L+ + GK + E ++ +
Sbjct: 9 LTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDIL 68
Query: 53 KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
+ + A +++GL E F + A P +++L + +
Sbjct: 69 RAVYDRIA---KEWGLEPDAAER-----EEFGTSVKNWPAFPDTVEALQYLK-KHYKLVI 119
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF---LEAAKRLNMEPSSSL 169
SN R + + F I+ + +V + KP+P+ F ++A + +E L
Sbjct: 120 LSNIDRNEFKLSNA---KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDIL 176
Query: 170 VIEDSVIG-VVAGKAAGMEVV--------AVPSLPKQTHRYTAADEVINSLLDL 214
+S+ + AG+ R D NS+ ++
Sbjct: 177 HTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 2e-09
Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+ GT+L+T + E L +Y K+ + I++ G
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQL-EYTWLLTIMGKYVEFEEITKITLRYILKVRGEESK 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
E + + +KA L + + SN ++ + ++G
Sbjct: 63 FDEEL--------NKWKNLKAYEDTKYLKEISEIA--EVYALSNGSINEVKQHLE-RNGL 111
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
F I ++ V+ KPSP ++ + + ++ + V+ K AGM + V
Sbjct: 112 LRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFV 169
Query: 192 --PSLPKQTHRYTAADEVINSLLDL 214
+ D ++N +L
Sbjct: 170 NRKNTIVD-PIGGKPDVIVNDFKEL 193
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 5e-09
Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 46/188 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W + + +
Sbjct: 23 MARLPKLAVFDLDYTL---------------------WPFWVDTHVDPPFHKSSDGTVRD 61
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
G V+ P ++K L GVP A AS + ++
Sbjct: 62 RRG--------------------QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQ 101
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F F ++ + S + +D +V
Sbjct: 102 LLELFDLFRYFVHREIYPG-----SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKL 156
Query: 185 GMEVVAVP 192
G+ + +
Sbjct: 157 GVTCIHIQ 164
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 8e-08
Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 22/205 (10%)
Query: 12 VILDLDGTLL--NTDGMFSEV----------LKTFLVKYGKEWDGREKHKIVGKTPLEEA 59
+ DLDG L G+ L K G +G + G+ L +
Sbjct: 6 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGP--EGATTRLMKGEITLSQW 63
Query: 60 AIIVEDYGLPCAKHEFVN-----EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
++E+ C++ V + +F + K + L G A+ +
Sbjct: 64 IPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILT 123
Query: 115 NS---HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N+ RA + F ++ S +V KP P I+ L PS + +
Sbjct: 124 NTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFL 183
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPK 196
+D + + GM + V
Sbjct: 184 DDIGANLKPARDLGMVTILVQDTDT 208
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-07
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 205
KP P + L A L+++ ++S ++ D + + A AA + V V + P AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 191 WVLNSLADL 199
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-07
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 203
KP P ++ + A+R +++ + + DS+ + A AG V +
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160
Query: 204 ADEVINSLLD 213
V L
Sbjct: 161 GTRVCEDLAA 170
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 4e-06
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKP FLEA + + P +++I D V + GM + V +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232
Query: 206 E---------VINSLLDL 214
E S
Sbjct: 233 EEKINPPPYLTCESFPHA 250
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 8e-06
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKPSP+ F A + + +E +++I D ++G V + GM + V +T ++ +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243
Query: 206 E---------VINSLLDL 214
E +++L +
Sbjct: 244 EHHPEVKADGYVDNLAEA 261
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-05
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 202
KP+P + +EA KRL ++ SL++ D + + AGK AG+ + P R
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196
Query: 203 AADEVINSLLD 213
+ LL
Sbjct: 197 RDSSELGDLLA 207
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 4e-05
Identities = 8/67 (11%), Positives = 19/67 (28%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
K + + + + S L + D+ + + A G+ +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246
Query: 208 INSLLDL 214
+ L
Sbjct: 247 YKNFETL 253
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 2e-04
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKP I A L +E +++ D+ I +G G++ + V S +P
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239
Query: 197 QTHRYTAADEVINSLLDLRPE 217
V++SL + E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 4e-04
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKP I +A + L + S +L++ D+ I +AG AGM+ + V + +
Sbjct: 182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTD 239
Query: 197 QTHRYTAADEVINSLLDLRPE 217
+ I+SL + P
Sbjct: 240 DMEK---PTHAIDSLTEWIPY 257
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176 | Back alignment and structure |
|---|
Score = 38.3 bits (90), Expect = 6e-04
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186
KP + M+ ++S VI D + + G+
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 154
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 38.2 bits (90), Expect = 9e-04
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKPSP I A ++ ++++ D++ I +AG AG+E + V S +
Sbjct: 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDI--LAGFQAGLETILVLSGVSSLDDIDS 232
Query: 197 QTHRYTAADEVINSLLDL 214
R + S+ ++
Sbjct: 233 MPFR---PSWIYPSVAEI 247
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 100.0 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 100.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 100.0 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 100.0 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 100.0 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 100.0 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 100.0 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 100.0 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 100.0 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 100.0 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 100.0 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 100.0 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 100.0 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 100.0 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 100.0 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 100.0 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 100.0 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 100.0 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 100.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 100.0 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 100.0 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 100.0 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 100.0 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 100.0 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 100.0 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 100.0 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 100.0 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 100.0 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 100.0 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.98 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.98 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.98 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.98 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.98 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.98 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.97 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.97 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.97 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.97 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.97 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.97 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.97 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.97 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.96 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.96 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.96 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.96 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.96 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.96 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.96 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.95 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.95 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.95 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.95 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.95 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.94 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.94 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.93 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.93 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.92 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.92 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.92 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.91 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.91 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.91 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.91 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.91 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.9 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.9 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.9 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.9 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.89 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.89 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.89 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.88 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.88 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.88 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.88 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.88 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.88 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.87 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.87 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.87 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.87 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.87 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.87 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.86 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.86 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.85 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.85 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.85 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.85 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.85 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.75 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.84 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.84 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.83 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.82 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.82 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.81 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.81 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.81 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.81 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.79 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.78 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.78 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.76 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.74 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.73 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.71 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.7 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.7 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.69 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.64 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.62 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.6 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.58 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.58 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.58 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.55 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.53 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 99.42 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.39 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.37 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.36 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.34 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.32 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 99.3 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.23 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.22 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.21 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.21 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.19 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.01 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.96 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.96 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.93 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.92 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.8 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.79 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.72 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.67 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.62 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.58 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 98.38 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.35 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.23 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 98.06 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.01 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.86 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.4 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 96.41 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 96.37 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 96.23 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.37 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 95.08 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 93.37 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 92.05 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 91.73 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 90.72 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 90.65 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 89.65 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.73 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 88.1 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 87.75 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.37 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 85.77 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.68 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 85.32 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 84.93 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 84.52 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 84.1 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 82.12 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 81.68 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 81.07 |
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=239.72 Aligned_cols=218 Identities=40% Similarity=0.622 Sum_probs=197.5
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
+++|+|+||+||||+++...+..++..++++++............+......+..+++.++......++...+...+.+.
T Consensus 28 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEV 107 (250)
T ss_dssp CCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998888888888898888888889988888777777777777777766
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc--ccCCCCCCHHHHHHHHHhcCCC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~--~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.....++|++.++|+.|++.|++++++||.....+...+.+..++..+|+.+++++ .....||++.+|+.+++++|++
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 187 (250)
T 3l5k_A 108 FPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPP 187 (250)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSC
T ss_pred hccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCC
Confidence 67788999999999999999999999999998877777734468889999999998 8899999999999999999999
Q ss_pred C--CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCCCCC
Q 026853 165 P--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPF 224 (232)
Q Consensus 165 ~--~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~~~~ 224 (232)
+ +++++|||+.||+.+|+.+|+.+++|++++...+.+..|+++++++.|+.+.+.++++|
T Consensus 188 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~~~ 249 (250)
T 3l5k_A 188 PAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSY 249 (250)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCCCC
T ss_pred CCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCCCC
Confidence 8 99999999999999999999999999998877777899999999999999999998876
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=226.95 Aligned_cols=210 Identities=21% Similarity=0.285 Sum_probs=172.3
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCcc--HHhHH---HHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KHEFV---NEVY 80 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~ 80 (232)
+|++|+|+||+||||+|+...+..++.++++++|++.+.+......|......+..++...+.... ..+.. ....
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKN 81 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHH
T ss_pred CccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 357999999999999999999999999999999998888888888899988888888887765422 11111 1111
Q ss_pred HHHHhh---hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH
Q 026853 81 SMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 81 ~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~ 157 (232)
..+.+. .....+.||+.++++.|+++|++++++|++.. ....+ +.+|+..+|+.++++++++.+||+|++|..+
T Consensus 82 ~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a 158 (243)
T 4g9b_A 82 LLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTIL-AALELREFFTFCADASQLKNSKPDPEIFLAA 158 (243)
T ss_dssp HHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHHH
T ss_pred HHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhh-hhhhhccccccccccccccCCCCcHHHHHHH
Confidence 112211 12346899999999999999999999998764 34567 8899999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccc
Q 026853 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l 218 (232)
++++|++|++|++|||+.+|+.+|+++|+.+|+|.+|...++. ...++.+.+++.++.+.+
T Consensus 159 ~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 159 CAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp HHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHH
T ss_pred HHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997665554 567777778877765443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=221.46 Aligned_cols=190 Identities=27% Similarity=0.441 Sum_probs=167.4
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh-h
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-L 87 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 87 (232)
+|+|+||+||||+|+...+..++..+++++|.+.+.+......+....................+.....+.+.+... .
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFS 80 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 589999999999999888899999999999998888888888898888888888888777766666666665555443 3
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
....++||+.++++.|++.|++++++||+....+...+ +.+|+..+||.++++++.+..||+|.+|..+++++|++|++
T Consensus 81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 45678999999999999999999999999999998888 89999999999999999999999999999999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCEEEE-eCCCCCccc
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVA-VPSLPKQTH 199 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~-v~~~~~~~~ 199 (232)
|+||||+.+|+.+|+++|+.+|+ +.+|....+
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~ 192 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGK 192 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCCEEEECCSSSCCH
T ss_pred eEEEecCHHHHHHHHHcCCcEEEEecCCCCCHH
Confidence 99999999999999999999986 666654433
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=219.06 Aligned_cols=210 Identities=25% Similarity=0.368 Sum_probs=181.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
+|+|+|+||+||||+++...+..++..++++++.......+....+......+..+....+.......+...+...+.+.
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNN 82 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHS
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999988777777888888777777777777665555666666666655544
Q ss_pred hc--cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 87 ~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.. ...++|++.++++.|++.|++++++||+....+...+ +.+++..+|+.+++++..+..||++.+++.+++++|++
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 161 (214)
T 3e58_A 83 PLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ 161 (214)
T ss_dssp CCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred hcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCC
Confidence 32 3478999999999999999999999999999998888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
++++++|||+.||+.+|+.+|+.+++++++..... ...++++++++.|+.+++
T Consensus 162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~-~~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD-QSAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC-CTTSSEEESSGGGGGGGC
T ss_pred hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch-hccHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999998543333 378999999999998764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=222.28 Aligned_cols=216 Identities=22% Similarity=0.217 Sum_probs=180.1
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHH---HHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EVYSM 82 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 82 (232)
++++|+|+||+||||+++...+..++..++++++.......+....+......+..++...+.......... .+.+.
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQA 82 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999998999999999999998888778788888888888888877776544443332 23333
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+........++|++.++++.|++.|++++++|+.....+...+ +.+++..+|+.+++++.....||++.+++.+++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~ 161 (233)
T 3s6j_A 83 YERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIG 161 (233)
T ss_dssp HHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTT
T ss_pred HHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhC
Confidence 3334456789999999999999999999999999999888888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc-ccch-hhhHhhhhccCcCccccCCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYT-AADEVINSLLDLRPEKWGLP 222 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~-~~~~~~~~l~el~~~l~~~~ 222 (232)
++++++++|||+.||+.||+.+|+.+++|.++.... ..+. .|+++++++.|+.+.+....
T Consensus 162 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 223 (233)
T 3s6j_A 162 APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIA 223 (233)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTC
T ss_pred CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHh
Confidence 999999999999999999999999999999864433 3333 48999999999999887543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=222.75 Aligned_cols=213 Identities=26% Similarity=0.311 Sum_probs=178.9
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
..++|+|+||+||||+++...+..++..++++++.......+....+......+..++...........+...+...+.+
T Consensus 16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGA 95 (237)
T ss_dssp -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999996666667777888887777666654433232334444445444444
Q ss_pred hh---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 86 HL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 86 ~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.. ....++|++.++|+.|++.|++++++||.....+...+ +.+|+..+|+.+++++.+..+||++.+++.+++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg 174 (237)
T 4ex6_A 96 HVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLG 174 (237)
T ss_dssp HHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHT
T ss_pred hcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcC
Confidence 43 56789999999999999999999999999999888888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-cccc-hhhhHhhhhccCcCcccc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRY-TAADEVINSLLDLRPEKW 219 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~-~~~~~~~~~l~el~~~l~ 219 (232)
++++++++|||+.||+.||+.+|+.+++|.+++.. ...+ ..|+++++++.|+.+.+.
T Consensus 175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 175 IPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHH
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999999997654 3333 379999999999988765
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=218.09 Aligned_cols=202 Identities=15% Similarity=0.243 Sum_probs=160.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCCc-cHHhHHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS 84 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (232)
|++|+|+||+||||+|+...+..++..+++++|.... ...+....+...... +... ... ...++...+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~ 76 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESS----FATC-LSKDQISEAVQIYRSYYK 76 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHH----HHTT-SCGGGHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHH----HHHH-cCHHHHHHHHHHHHHHHH
Confidence 3589999999999999998888999999999987653 344555566554332 2222 221 22334444444443
Q ss_pred hh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 85 ~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
.. .....++||+.++|+.|++ |++++++||+....+...+ +++|+..+|+.+++++ ...||+|.+|..+++++|+
T Consensus 77 ~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~ 152 (210)
T 2ah5_A 77 AKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQL 152 (210)
T ss_dssp HTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTC
T ss_pred HhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCC
Confidence 32 3346789999999999999 9999999999998888888 8899999999998887 7899999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-c-hhhhHhhhhccCcCcc
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-Y-TAADEVINSLLDLRPE 217 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~-~~~~~~~~~l~el~~~ 217 (232)
+|++|++|||+.+|+.+|+++|+.++++.+++..... . ..++++++++.|+...
T Consensus 153 ~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999987653332 2 4688999999988654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=218.06 Aligned_cols=202 Identities=24% Similarity=0.372 Sum_probs=165.5
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCcc--HH---hHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KH---EFVNEVYS 81 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~ 81 (232)
.|+|+|+||+||||+|+...+..++..+++++|++.+.+......+.........+......... .. .+......
T Consensus 24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN 103 (250)
T ss_dssp CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999998888877788888888877777766554322 11 12222223
Q ss_pred HHHhhh---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHH
Q 026853 82 MFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (232)
Q Consensus 82 ~~~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~ 158 (232)
.+.... ....++|++.++++.|++.|+++++.|++.. ....+ +++|+..+|+.++++++.+..||+|+.|..++
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~ 180 (250)
T 4gib_A 104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMSA 180 (250)
T ss_dssp HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHHH
T ss_pred HHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHh-hhcccccccceeecccccCCCCCcHHHHHHHH
Confidence 333222 3456899999999999999999988776643 44567 88999999999999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcC
Q 026853 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (232)
Q Consensus 159 ~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~ 215 (232)
+++|++|++|+||||+.+|+.+|+++|+.+|+|.+. +....|++++++++||.
T Consensus 181 ~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----~~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 181 KGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----ENLKKANLVVDSTNQLK 233 (250)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----TTTTTSSEEESSGGGCC
T ss_pred HHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----hHhccCCEEECChHhCC
Confidence 999999999999999999999999999999999762 23356899999999984
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=218.81 Aligned_cols=213 Identities=23% Similarity=0.340 Sum_probs=175.1
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHH-cCCCccHHhHHHHHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (232)
+|+++|+|+||+||||+++...+..++..+++++|............+......+..++.. ++.....+.....+....
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKS 99 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999988877777777777777666666544 566555444433322221
Q ss_pred Hh--hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHH
Q 026853 84 SD--HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 84 ~~--~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
.. ......++|++.++++.|++.|++++++||.....+...+ +. ++..+| +.++++++...+||+|.+|+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~ 177 (243)
T 3qxg_A 100 ILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALK 177 (243)
T ss_dssp HHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHH
T ss_pred HHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHH
Confidence 11 1235678999999999999999999999999988888788 66 999999 889999999999999999999999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCcccc
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~ 219 (232)
++|++|+++++|||+.||+.||+.+|+.++++.++...... ...|+++++++.||.+.+.
T Consensus 178 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~ 239 (243)
T 3qxg_A 178 KGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWD 239 (243)
T ss_dssp HTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHH
T ss_pred HcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999986554433 3479999999999987764
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=220.67 Aligned_cols=216 Identities=28% Similarity=0.381 Sum_probs=181.8
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcch-hhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++++|+|+||+||||+++...+..++..++++++....... .....+......+..+...++...... ....+.+.+
T Consensus 24 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 102 (259)
T 4eek_A 24 PDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPD-FLDVLETRF 102 (259)
T ss_dssp -CCCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTT-HHHHHHHHH
T ss_pred HhcCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHH
Confidence 345789999999999999999899999999999998766544 456677888888888888887765433 333444444
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce-eecccccC-CCCCCHHHHHHHHHhc
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKRL 161 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~-~~~~~~~~-~~kp~~~~~~~~~~~~ 161 (232)
.+.+....++|++.++++.|++.|++++++||.....+...+ +.+++..+|+. ++++++.+ ..||++.+++.+++++
T Consensus 103 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~l 181 (259)
T 4eek_A 103 NAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQL 181 (259)
T ss_dssp HHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHT
T ss_pred HHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHc
Confidence 444467789999999999999999999999999999888888 88999999999 99999999 9999999999999999
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc----c-cc-chhhhHhhhhccCcCccccCCC
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----T-HR-YTAADEVINSLLDLRPEKWGLP 222 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~----~-~~-~~~~~~~~~~l~el~~~l~~~~ 222 (232)
|++++++++|||+.||+.+|+.+|+.+++++++... . .. ...|+++++++.||.+.+....
T Consensus 182 gi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 182 GILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAG 248 (259)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHTT
T ss_pred CCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhcc
Confidence 999999999999999999999999999999986443 1 22 4568999999999999887543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=214.91 Aligned_cols=207 Identities=21% Similarity=0.272 Sum_probs=172.2
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
++|+|+||+||||+++...+..++..+++++|.. .+.+.+....+......+..++. .....++...+.+.+...
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 77 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK----DKFREEYVEVFRKHYLEN 77 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG----GGCCTHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC----hHHHHHHHHHHHHHHHHh
Confidence 5799999999999999998888999999999876 45556667777776666655543 112234444455544433
Q ss_pred -hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.++++++....||+|..+..+++++|+++
T Consensus 78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP 156 (222)
T ss_dssp SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence 346788999999999999999999999999998888888 889999999999999999999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
+++++|||+.+|+.+|+.+|+.+++|.++...... ..++++++++.|+...+..
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~ 210 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDN 210 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHT
T ss_pred hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999987654444 6789999999999877653
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=215.84 Aligned_cols=210 Identities=19% Similarity=0.205 Sum_probs=173.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCCcc-HHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 85 (232)
++|+|+||+||||+++...+..++..+++++|.... ...+....+......+...+ +.+.. .......+.+.+.+
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 79 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFDEETATVAIDYYRDYFKA 79 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999889999999999988753 45566677777665544433 44321 12222233333332
Q ss_pred -hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 86 -HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 86 -~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
......++|++.++++.|++.|++++++|++....+...+ +.+++..+|+.+++++....+||++.+++.+++++|++
T Consensus 80 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~ 158 (226)
T 3mc1_A 80 KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK 158 (226)
T ss_dssp TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC
T ss_pred hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC
Confidence 2235689999999999999999999999999999888888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccccCC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~~~ 221 (232)
|+++++|||+.||+.||+.+|+.+++|++|+..... +..|+++++++.|+.+++...
T Consensus 159 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 159 SDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp GGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred cccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999997765554 478999999999999887743
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=217.39 Aligned_cols=213 Identities=22% Similarity=0.365 Sum_probs=174.2
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHH-cCCCccHHhHHHHHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (232)
.++++|+|+||+||||+++...+..++..+++++|............+......+..++.. ++...+.+.....+...
T Consensus 19 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 97 (247)
T 3dv9_A 19 ESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAK- 97 (247)
T ss_dssp SCCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHH-
T ss_pred CCCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHHH-
Confidence 3457899999999999999998999999999999988877776777777777666666544 56655544444333222
Q ss_pred Hhhh---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHH
Q 026853 84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAA 158 (232)
Q Consensus 84 ~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~ 158 (232)
...+ ....++|++.++++.|++.|++++++||+....+...+ +. ++..+| +.+++++....+||+|.+++.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~ 175 (247)
T 3dv9_A 98 TEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMAL 175 (247)
T ss_dssp HHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHH
T ss_pred HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHH
Confidence 2222 34688999999999999999999999999988888888 77 999999 88999999999999999999999
Q ss_pred HhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccccC
Q 026853 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 159 ~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~~ 220 (232)
+++|++|+++++|||+.||+.||+.+|+.++++.++...... ...|+++++++.|+.+.+..
T Consensus 176 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~ 239 (247)
T 3dv9_A 176 KKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWET 239 (247)
T ss_dssp HHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHH
T ss_pred HHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999997655443 34799999999998877653
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=218.49 Aligned_cols=209 Identities=20% Similarity=0.277 Sum_probs=167.2
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC--CCcchhhhhcCCChHHHHHHHHHHc------------------C
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDY------------------G 67 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 67 (232)
++|+|+||+||||+|+...+..++..+++++|.. .+...+....+......+..+.... +
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 5899999999999999999999999999999976 5556667777877666665554211 1
Q ss_pred CCccHH---hHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc
Q 026853 68 LPCAKH---EFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (232)
Q Consensus 68 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 143 (232)
.....+ ++...+.+.+... .....++||+.++|+.|+++|++++++||.....+...+ +.+++. +|+.+++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~ 160 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKS 160 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCC
Confidence 111222 2223333333332 235678999999999999999999999999988888888 888988 9999999999
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-cc-hhhhHhhhhccCcCccc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RY-TAADEVINSLLDLRPEK 218 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~-~~~~~~~~~l~el~~~l 218 (232)
...+||+|.++..+++++|++|++|++|||+.||+.+|+.+|+.+++|.+++.... .. ..++++++++.|+...+
T Consensus 161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp TSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998764422 22 36889999999987655
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=214.15 Aligned_cols=212 Identities=17% Similarity=0.178 Sum_probs=172.5
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC------------C-ChH----HHHHHHHHHcCC
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------K-TPL----EEAAIIVEDYGL 68 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~----~~~~~~~~~~~~ 68 (232)
|+++|+|+||+||||+++...+..++..+++++|............+ . ... ..+..++..++.
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY 83 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999899999999999998765544322111 1 111 123445556666
Q ss_pred CccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCC
Q 026853 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~k 148 (232)
..........+...+. ....++|++.++++.|++. ++++++||.....+...+ +.+++..+|+.+++++..+..|
T Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k 158 (238)
T 3ed5_A 84 EADGALLEQKYRRFLE---EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQK 158 (238)
T ss_dssp CCCHHHHHHHHHHHHT---TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSCT
T ss_pred CCcHHHHHHHHHHHHH---hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCCC
Confidence 6544443333332222 3468899999999999999 999999999998888888 8889999999999999999999
Q ss_pred CCHHHHHHHHHhcC-CCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCCC
Q 026853 149 PSPDIFLEAAKRLN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLP 222 (232)
Q Consensus 149 p~~~~~~~~~~~~~-~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~~ 222 (232)
|++.+++.+++++| ++|+++++|||+. ||+.||+.+|+.++++++++.....+..|+++++++.|+...+....
T Consensus 159 p~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 234 (238)
T 3ed5_A 159 PMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIEN 234 (238)
T ss_dssp TCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTCCC
T ss_pred CChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHhhc
Confidence 99999999999999 9999999999998 99999999999999999987666677889999999999999887643
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=214.42 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=172.0
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCc-cHHhHHHHHHHHHHh-
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSD- 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 85 (232)
++|+|+||+||||+++...+..++..++++++.......+....+......+... ++.+. ........+.+.+.+
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 104 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADK 104 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHT
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999998999999999999988666777777777665543332 24331 122233333333333
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC-
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME- 164 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~- 164 (232)
......++|++.++++.|++.|++++++|++....+...+ +.+++..+|+.+++++..+..||++.+++.+++++|++
T Consensus 105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 105 GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKD 183 (240)
T ss_dssp GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence 2345679999999999999999999999999999888888 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l 218 (232)
++++++|||+.||+.+|+.+|+.+++|.+|+..... +..|+++++++.|+.+.|
T Consensus 184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999999999999999999987665554 478999999999998765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=207.94 Aligned_cols=202 Identities=20% Similarity=0.333 Sum_probs=165.6
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH---
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS--- 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 84 (232)
++|+|+||+||||+++...+..++.++++++|...+...+....+......+ +.++... ......+...+.
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~ 76 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAM----TELGIAA--SEFDHFQAQYEDVMA 76 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHH----HHTTCCG--GGHHHHHHHHHHHHT
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHH----HHcCCCH--HHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999887777777777777654443 3344432 222222222222
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.......++|++.++++.|++. ++++++||+....+...+ +.+|+..+|+.++++++.+..||++.+++.+++++|++
T Consensus 77 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 154 (209)
T 2hdo_A 77 SHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 154 (209)
T ss_dssp TCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred hhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 2224577899999999999999 999999999998888888 88899999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-cccchhhhHhhhhccCcCccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~l~el~~~l 218 (232)
++++++|||+.||+.+|+.+|+.++++++++.. ...+. ++++++++.|+...+
T Consensus 155 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 155 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILELF 208 (209)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGGC
T ss_pred cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHhh
Confidence 999999999999999999999999999976543 33344 999999999997754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=211.13 Aligned_cols=202 Identities=28% Similarity=0.351 Sum_probs=157.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCC--CccHHhH---HHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL--PCAKHEF---VNEVYSM 82 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~ 82 (232)
++|+|+||+||||+++...+..++..+++++|.......+....+......+..++..++. ..+.... ...+...
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRD 80 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999988999999999999998888888888899888888888888776 4333332 2333333
Q ss_pred HHhhhcc---CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 83 FSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 83 ~~~~~~~---~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
+.+.... ..++||+.++|+.|++.|++++++||+.. ....+ +.+|+..+|+.+++++....+||+|.+++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 81 YQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA 157 (233)
T ss_dssp HHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred HHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence 3333322 34799999999999999999999999855 66677 889999999999999999999999999999999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCc
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~ 216 (232)
++|++|+++++|||+.||+.||+.+|+.+++++.. ...+ .|+++++++.|+..
T Consensus 158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~---~~~~-~ad~v~~s~~el~~ 210 (233)
T 3nas_A 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG---QPML-GADLVVRQTSDLTL 210 (233)
T ss_dssp HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCH
T ss_pred HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc---cccc-cCCEEeCChHhCCH
Confidence 99999999999999999999999999999999762 2333 89999999999863
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=210.31 Aligned_cols=209 Identities=20% Similarity=0.192 Sum_probs=167.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC---Ccchhhhhc-------------C-CChH----HHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---DGREKHKIV-------------G-KTPL----EEAAIIVED 65 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------------~-~~~~----~~~~~~~~~ 65 (232)
|++|+|+||+||||+++...+..++..+++++|... +...+.... + .... ..+..++..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 468999999999999999888899999999998764 333321111 1 1111 124455566
Q ss_pred cCCCccHHhHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc
Q 026853 66 YGLPCAKHEFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (232)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 144 (232)
.+.. .......+...+.+. .....++|++.++++.|+ .|++++++||+........+ +.+++..+|+.+++++..
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~ 158 (240)
T 3qnm_A 83 VGVE--DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDL 158 (240)
T ss_dssp TTCC--CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGT
T ss_pred cCCC--cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEeccC
Confidence 6665 333444444444333 345789999999999999 89999999999998888888 888999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
+..||++.+++.+++++|++|+++++|||+. ||+.+|+.+|+.+++++++.. ......|+++++|+.|+..+..+
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~~~~ 234 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNLLEG 234 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHHTC-
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHHHhc
Confidence 9999999999999999999999999999996 999999999999999999665 34567899999999999887764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=216.45 Aligned_cols=215 Identities=18% Similarity=0.225 Sum_probs=169.9
Q ss_pred ccccccEEEEeCCCcccccHHHH-HHHHHHHHHHcCCCCCcchhhhhcCCChHHHHH----------HHHHHcCCCccHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMF-SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA----------IIVEDYGLPCAKH 73 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 73 (232)
+++++|+|+||+||||+++.... ..++..+++++|+...........+......+. .+...++......
T Consensus 10 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (277)
T 3iru_A 10 CAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEE 89 (277)
T ss_dssp CCCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHH
T ss_pred hhccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHH
Confidence 34568999999999999986544 678888999999887777777777665543332 2334445544333
Q ss_pred hHH---HHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc-cceeecccccCCCC
Q 026853 74 EFV---NEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRTGK 148 (232)
Q Consensus 74 ~~~---~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~~~k 148 (232)
... ..+...+.+. .....++|++.++|+.|++.|++++++||.........+ +.+++..+ |+.+++++....+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~k 168 (277)
T 3iru_A 90 DIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVRGR 168 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSSCT
T ss_pred HHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCCCC
Confidence 322 2222222222 235689999999999999999999999999998888888 88888888 89999999999999
Q ss_pred CCHHHHHHHHHhcCCCC-CcEEEEeCchhhhhhhhhcCCEEEEeCCCCC------------------------cccc-ch
Q 026853 149 PSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK------------------------QTHR-YT 202 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~-~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~-~~ 202 (232)
|++.+++.+++++|+++ +++++|||+.||+.||+.+|+.+++|.+|.. .... ..
T Consensus 169 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (277)
T 3iru_A 169 PFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNA 248 (277)
T ss_dssp TSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhC
Confidence 99999999999999999 9999999999999999999999999999753 1222 34
Q ss_pred hhhHhhhhccCcCccccC
Q 026853 203 AADEVINSLLDLRPEKWG 220 (232)
Q Consensus 203 ~~~~~~~~l~el~~~l~~ 220 (232)
.|+++++++.||.+++..
T Consensus 249 ~ad~v~~~~~el~~~l~~ 266 (277)
T 3iru_A 249 GAHYVIDSVADLETVITD 266 (277)
T ss_dssp TCSEEESSGGGTHHHHHH
T ss_pred CCCEEecCHHHHHHHHHH
Confidence 689999999999887753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=208.28 Aligned_cols=209 Identities=15% Similarity=0.118 Sum_probs=163.9
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcch---hhhh----------cCCChH---HHHHHHHHHcCCCcc
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---KHKI----------VGKTPL---EEAAIIVEDYGLPCA 71 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------~~~~~~---~~~~~~~~~~~~~~~ 71 (232)
++|+|+||+||||+++...+..++..++++++....... +... .|.... ..+..+...++...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 81 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDV- 81 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCH-
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCH-
Confidence 479999999999999988888888889888886543322 1111 143333 44555555555542
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecccccCCCC
Q 026853 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~k 148 (232)
.... .....+...+....++|++.++++.|++.|++++++||.. .......+ +.+++..+|+.++++++....|
T Consensus 82 -~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k 158 (235)
T 2om6_A 82 -ELVK-RATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYK 158 (235)
T ss_dssp -HHHH-HHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCT
T ss_pred -HHHH-HHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCC
Confidence 2222 2222233333333469999999999999999999999998 88888788 8889999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
|++..+..+++++|++|+++++|||+. ||+.||+.+|+.++++++++...+....++++++++.|+...+..
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 231 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIEL 231 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHH
Confidence 999999999999999999999999999 999999999999999998765555556688999999999877653
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=201.73 Aligned_cols=211 Identities=22% Similarity=0.350 Sum_probs=173.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHHh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (232)
++|+|+||+||||+++...+..++..++++++.... ...+....+.........+....+.. .........+...+.+
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 589999999999999998888889999999987654 34445566776666666666665543 2344444444444433
Q ss_pred h-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 86 H-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 86 ~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
. .....+.|++.++++.+++.|++++++|+.....+...+ +.+++..+|+.+++++..+..||++.+++.+++++|++
T Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~ 166 (226)
T 1te2_A 88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD 166 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC
Confidence 2 245678999999999999999999999999988888888 88899999999999999999999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC-ccccchhhhHhhhhccCcCcccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
++++++|||+.||+.|++.+|+.++++.++.. ....+..|++++.++.|+.+.+.
T Consensus 167 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~~ 222 (226)
T 1te2_A 167 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222 (226)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHH
T ss_pred HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHHh
Confidence 99999999999999999999999999998643 44457889999999999987654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-33 Score=205.47 Aligned_cols=212 Identities=17% Similarity=0.211 Sum_probs=168.5
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC-CcchhhhhcCCChHHHHHHHHHHc----CCCccHHh---HHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDY----GLPCAKHE---FVN 77 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~ 77 (232)
..++|+|+||+||||+++...+..++..+++++|... ....+....+......+...+... +....... ...
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 99 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHH
Confidence 4578999999999999999888899999999998764 344455666666555555444321 22222222 222
Q ss_pred HHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHH
Q 026853 78 EVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (232)
Q Consensus 78 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~ 156 (232)
.+.+.+... .....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++.....||++..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~ 178 (243)
T 2hsz_A 100 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 178 (243)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHH
Confidence 233333332 245678999999999999999999999999998888888 888999999999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc--cccchhhhHhhhhccCcCccc
Q 026853 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 157 ~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~~~~~~~~l~el~~~l 218 (232)
+++++|++++++++|||+.||+.+|+.+|+.++++.++... ......++++++++.|+...+
T Consensus 179 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 179 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 99999999999999999999999999999999999986542 223567899999999987654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=207.66 Aligned_cols=221 Identities=18% Similarity=0.199 Sum_probs=166.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcC---CCCCcchhhhhc--C-----CChHHHHHHHHHHc-CCCccHHhHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKHKIV--G-----KTPLEEAAIIVEDY-GLPCAKHEFV 76 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~-~~~~~~~~~~ 76 (232)
|+|+|+||+||||+++...+..++..++++++ ............ + ......+..++..+ +.... ...
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 78 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNP--KWI 78 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCH--HHH
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccc--hHH
Confidence 37899999999999998888888888887763 333322221111 0 00111234444554 44321 112
Q ss_pred HHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHH
Q 026853 77 NEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 155 (232)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~ 155 (232)
..+...+.+. .....++|++.++|+.|++.|++++++||+....+...+ +.+++..+|+.+++++..+..||+|..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (241)
T 2hoq_A 79 SAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFK 157 (241)
T ss_dssp HHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHH
Confidence 2333333332 234678999999999999999999999999988888888 88899999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccc---hhhhHhhhhccCcCccccCCCCCCCCCCCC
Q 026853 156 EAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY---TAADEVINSLLDLRPEKWGLPPFQDCKPCP 231 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~---~~~~~~~~~l~el~~~l~~~~~~~~~~~~~ 231 (232)
.+++++|++|+++++|||+. ||+.+|+.+|+.++++.++....... ..++++++++.|+.+.+....+.+...-.|
T Consensus 158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~~~~~~~~~~ 237 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARESSSNKKVHPP 237 (241)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHHCCSCSSCSCCC
T ss_pred HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHHHhhccCCCCCc
Confidence 99999999999999999998 99999999999999997765443333 278999999999999888777666655554
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=208.79 Aligned_cols=211 Identities=19% Similarity=0.242 Sum_probs=167.0
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHH-cCCCCCcchhhhhcCCChHHHHHHHHHHcCCCcc-----HHhHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFVNEVYS 81 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 81 (232)
++|+|+||+||||+++...+..++..++++ ++.... ..+....|......+..++..++.... ...+...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA 81 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHH
Confidence 589999999999999988888888888888 676655 455566777777767777777776533 2223333433
Q ss_pred HHHhhh--ccCCCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccC-CCCCCHHHHHHH
Q 026853 82 MFSDHL--CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEA 157 (232)
Q Consensus 82 ~~~~~~--~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~kp~~~~~~~~ 157 (232)
.+.+.. ....+.|++.++|+.|++. |++++++|++....+...+ +.+++..+|+.++++++.. ..||.+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~ 160 (234)
T 2hcf_A 82 LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERA 160 (234)
T ss_dssp HHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence 333322 3467899999999999999 9999999999998888888 8899999999877766654 456888999999
Q ss_pred HHhcC--CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccc--hhhhHhhhhccCcCccccC
Q 026853 158 AKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 158 ~~~~~--~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~--~~~~~~~~~l~el~~~l~~ 220 (232)
++++| ++|+++++|||+.||+.+|+.+|+.+++|.+++...... ..++++++++.|+...+..
T Consensus 161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~ 227 (234)
T 2hcf_A 161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS 227 (234)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHH
Confidence 99999 999999999999999999999999999999976554432 3489999999999877653
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=204.24 Aligned_cols=212 Identities=23% Similarity=0.370 Sum_probs=171.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
++|+|+||+||||+++...+..++..+++++|.... ........+......+..+...++...... ....+.+.+.+.
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMR 81 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHH
Confidence 579999999999999998888889999999998766 344566777877788888887777654322 222333333322
Q ss_pred -hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCC--CCCHHHHHHHHHhcC
Q 026853 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLN 162 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~--kp~~~~~~~~~~~~~ 162 (232)
.....++|++.++++.++. +++++|+.....+...+ +.+++..+| +.+++++....+ ||++.+++.+++++|
T Consensus 82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~ 157 (229)
T 2fdr_A 82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 157 (229)
T ss_dssp HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcC
Confidence 2456789999999988874 89999999998888888 888999999 999998888889 999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-----cccchh-hhHhhhhccCcCccccCCCCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-----THRYTA-ADEVINSLLDLRPEKWGLPPF 224 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~~-~~~~~~~l~el~~~l~~~~~~ 224 (232)
++++++++|||+.||+.||+.+|+.+++++++... ...+.. |+++++++.|+...+..++++
T Consensus 158 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~ 225 (229)
T 2fdr_A 158 VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEW 225 (229)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHTC-
T ss_pred CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999986542 123343 899999999998877655443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=198.86 Aligned_cols=201 Identities=17% Similarity=0.239 Sum_probs=165.2
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
++|+|+||+||||+++...+..++..+++++|........+...+ ......+..+....... ......+...+.+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD---VEVLNQVRAQSLAE 79 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC---HHHHHHHHHHHHTT
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc---HHHHHHHHHHHHHh
Confidence 589999999999999998888889999999988777677777776 66655555554333321 23333444444433
Q ss_pred h-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 87 ~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
. ....+.|++.++++.+++.|++++++|++...... .+ +.+++..+|+.+++++.....||++..+..+++++|+++
T Consensus 80 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 80 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS 157 (207)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCc
Confidence 2 46678999999999999999999999999988888 77 888999999999999998999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+++++|||+.||+.|++.+|+.++++.++. . .|+++++++.|+...+.
T Consensus 158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISRIFE 205 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHHHTS
T ss_pred ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHHHHh
Confidence 999999999999999999999999998865 3 68999999999877653
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=199.18 Aligned_cols=200 Identities=23% Similarity=0.301 Sum_probs=163.0
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHh---HHHHHHHHHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFS 84 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 84 (232)
+|+|+||+||||+++...+..++..++++++.. ..........+......+..++...+...+... +...+...+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYV 81 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 799999999999999988888999999999876 556666677777777777777777765443332 2223333333
Q ss_pred hhhc---cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhc
Q 026853 85 DHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 85 ~~~~---~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 161 (232)
.... ...+.|++.++++.+++.|++++++|+. ......+ +.+++..+|+.+++++..+..||+|.+++.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 82 KMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred HHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 3222 3578899999999999999999999998 3455566 77899999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcC
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~ 215 (232)
|++|+++++|||+.||+.||+.+|+.+++++. ....+ .|+++++++.|+.
T Consensus 159 gi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHC-SSSEEESSGGGCC
T ss_pred CCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---HHHhc-cccchhcCHHhCC
Confidence 99999999999999999999999999999965 33334 7899999999874
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=204.23 Aligned_cols=201 Identities=22% Similarity=0.221 Sum_probs=159.6
Q ss_pred cccccEEEEeCCCcccccHHHHHHHH-HHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVL-KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
|+++|+|+||+||||+++...+..++ .+++++++... ..+....+......+..+... ........+...+.
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 94 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK-----RWKEATILYENSLE 94 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHh
Confidence 45789999999999999987777777 88899888765 344445555554444443321 23333344444444
Q ss_pred --hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 85 --DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 85 --~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.......+.|++.++++.|++.|++++++||.....+...+ +.+|+..+|+.++++++....||++.+++.+++++|
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 95 KSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHT
T ss_pred hhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcC
Confidence 22346789999999999999999999999999999898888 889999999999999999999999999999999999
Q ss_pred CCCC-cEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 163 MEPS-SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 163 ~~~~-~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
++++ ++++|||+.||+.+|+.+|+.++++..+.. ..+++++.++.|+.+.+.
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l~ 226 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFIC 226 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHHH
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHHH
Confidence 9999 999999999999999999999999976332 356778888888877654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-32 Score=197.08 Aligned_cols=212 Identities=22% Similarity=0.247 Sum_probs=162.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC-CcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
|++|+|+||+||||+++...+..++..++++++... ....+....+.........+.... .......+...+...+.+
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADI 82 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHH
Confidence 358999999999999999888888999999988753 344555666666555554443211 001112222333333333
Q ss_pred hh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 86 ~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.. ....+.|++.++++.+++.|++++++|+.........+ +.+++..+|+.+++++.....||++.++..+++++|++
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 161 (225)
T 3d6j_A 83 YMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC 161 (225)
T ss_dssp HTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC
T ss_pred hccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC
Confidence 22 35678999999999999999999999999988888888 88899999999999988889999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc-ccch-hhhHhhhhccCcCccccC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYT-AADEVINSLLDLRPEKWG 220 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~-~~~~~~~~l~el~~~l~~ 220 (232)
++++++|||+.||+.|++.+|+.++++.++.... ..+. .|+++++++.|+.+.+..
T Consensus 162 ~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~ 219 (225)
T 3d6j_A 162 PEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPED 219 (225)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-----
T ss_pred hHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhh
Confidence 9999999999999999999999999999864433 3333 489999999999888754
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=204.34 Aligned_cols=205 Identities=17% Similarity=0.208 Sum_probs=162.6
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC------------CCh----HHHHHHHHHHcCCC
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------KTP----LEEAAIIVEDYGLP 69 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~ 69 (232)
++++|+|+||+||||+++...+..++..+++++|...+...+....+ ... ...+..+.+.++..
T Consensus 3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3smv_A 3 LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLE 82 (240)
T ss_dssp GGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCC
T ss_pred CccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCC
Confidence 45789999999999999998889999999999998776655432221 111 23344555666665
Q ss_pred ccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCC
Q 026853 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (232)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp 149 (232)
.... ....+........++|++.++|+.|++ |++++++||.........+ +. +..+|+.++++++....||
T Consensus 83 ~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~KP 153 (240)
T 3smv_A 83 PDAA-----EREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYKP 153 (240)
T ss_dssp CCHH-----HHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCTT
T ss_pred CCHH-----HHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCCC
Confidence 3322 223344445567899999999999999 7999999999998888777 54 6679999999999999999
Q ss_pred CHHHHHHH---HHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCC-------Cc-cccchhhhHhhhhccCcCcc
Q 026853 150 SPDIFLEA---AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP-------KQ-THRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 150 ~~~~~~~~---~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~-------~~-~~~~~~~~~~~~~l~el~~~ 217 (232)
+|..|..+ ++++|++|+++++|||+. ||+.+|+.+|+.++++++++ .. ......|+++++|+.|+.+.
T Consensus 154 ~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 154 NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 99999999 899999999999999997 99999999999999999752 11 22357899999999999877
Q ss_pred cc
Q 026853 218 KW 219 (232)
Q Consensus 218 l~ 219 (232)
+.
T Consensus 234 l~ 235 (240)
T 3smv_A 234 HK 235 (240)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=205.35 Aligned_cols=213 Identities=17% Similarity=0.216 Sum_probs=164.7
Q ss_pred ccccEEEEeCCCcccccHH-HHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHH----------HHcCCCccHHhH
Q 026853 7 KLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKHEF 75 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 75 (232)
|++|+|+||+||||+++.. .+..++..+++++|.......+....+.........+. ..++........
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 83 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHH
Confidence 4689999999999999877 56788888999999877666666666666544433322 233433332222
Q ss_pred ---HHHHHHHHHh-hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCCCCC
Q 026853 76 ---VNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS 150 (232)
Q Consensus 76 ---~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~ 150 (232)
...+...+.. ......++|++.++++.|++.|++++++|+.....+...+ +.+++..+| +.+++++....+||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~ 162 (267)
T 1swv_A 84 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPY 162 (267)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTS
T ss_pred HHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCC
Confidence 2222222222 2345678999999999999999999999999988888777 777877775 888888888999999
Q ss_pred HHHHHHHHHhcCCCC-CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc------------------------ccc-chhh
Q 026853 151 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAA 204 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~-~~~~ 204 (232)
+.++..+++++|+++ +++++|||+.||+.|++.+|+.+++|++++.. ... ...|
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 242 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence 999999999999999 99999999999999999999999999997652 122 2458
Q ss_pred hHhhhhccCcCccccC
Q 026853 205 DEVINSLLDLRPEKWG 220 (232)
Q Consensus 205 ~~~~~~l~el~~~l~~ 220 (232)
+++++++.|+...+..
T Consensus 243 d~v~~~~~el~~~l~~ 258 (267)
T 1swv_A 243 HFTIETMQELESVMEH 258 (267)
T ss_dssp SEEESSGGGHHHHHHH
T ss_pred ceeccCHHHHHHHHHH
Confidence 9999999999877653
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=206.41 Aligned_cols=210 Identities=22% Similarity=0.236 Sum_probs=165.9
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh------------------cCCChHHH----HHHHHHHc
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDY 66 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~ 66 (232)
+|+|+||+||||+++...+..++..+++++|...+...+... .+...... +...+...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 589999999999998777778888999999987666544221 24444333 33444455
Q ss_pred CCCccHHhHHHHHHHHHHhhhc--cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc
Q 026853 67 GLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (232)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 144 (232)
+. .....+.......+..... ...++||+.++|+.|++.|++++++||.... +...+ +.+|+..+|+.++++++.
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~ 157 (263)
T 3k1z_A 81 GV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAA 157 (263)
T ss_dssp TC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeeccc
Confidence 54 2344444444444444432 4579999999999999999999999998775 56677 889999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccc---cchhhhHhhhhccCcCccccC
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~---~~~~~~~~~~~l~el~~~l~~ 220 (232)
+..||+|.++..+++++|++|+++++|||+. +|+.+|+.+|+.+++++++..... ....|+++++++.|+...+..
T Consensus 158 ~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~ 237 (263)
T 3k1z_A 158 GWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDC 237 (263)
T ss_dssp SSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999997 999999999999999999654332 234799999999999988764
Q ss_pred C
Q 026853 221 L 221 (232)
Q Consensus 221 ~ 221 (232)
+
T Consensus 238 ~ 238 (263)
T 3k1z_A 238 L 238 (263)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=202.82 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=161.7
Q ss_pred cccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh-hhcCCC--------------------hHHHHHHH
Q 026853 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKT--------------------PLEEAAII 62 (232)
Q Consensus 4 ~~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------------~~~~~~~~ 62 (232)
|.++++|+|+||+||||+++...+..++..+++++|.+....... .+.+.. ....+..+
T Consensus 10 m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (254)
T 3umg_A 10 STGRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFV 89 (254)
T ss_dssp TTCSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHH
T ss_pred CCCCCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 344578999999999999998888999999999998876554432 222210 11223344
Q ss_pred HHHcCCCccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc
Q 026853 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (232)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 142 (232)
++.++.+. ..+.......+...+....++|++.++++.|++. ++++++||.....+...+ +.+|+. |+.+++++
T Consensus 90 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~ 163 (254)
T 3umg_A 90 LRESGIDP--TNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSD 163 (254)
T ss_dssp HHHTTCCG--GGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCCHH
T ss_pred HHHhCCCc--CcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcC
Confidence 44444420 0011111222333445678899999999999997 999999999999888888 888885 89999999
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC----CCCcc-c--cchhhhHhhhhccCcC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQT-H--RYTAADEVINSLLDLR 215 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~----~~~~~-~--~~~~~~~~~~~l~el~ 215 (232)
.....||++.+++.+++++|++++++++|||+.||+.||+.+|+.++++++ |.... . ....++++++|+.||.
T Consensus 164 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~ 243 (254)
T 3umg_A 164 INRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLA 243 (254)
T ss_dssp HHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999994 32222 2 2578999999999998
Q ss_pred ccccC
Q 026853 216 PEKWG 220 (232)
Q Consensus 216 ~~l~~ 220 (232)
..+..
T Consensus 244 ~~l~~ 248 (254)
T 3umg_A 244 AQLRA 248 (254)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 88764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=202.41 Aligned_cols=208 Identities=18% Similarity=0.220 Sum_probs=155.5
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCc---------chhhhhcCCC------hHHHHHHHHHHcCCCcc
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGKT------PLEEAAIIVEDYGLPCA 71 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 71 (232)
+++|+|+||+||||+++...+..+... +...+..... .......+.. ....+..+++.++....
T Consensus 3 ~~~k~i~fDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (230)
T 3um9_A 3 HAIKAVVFDLYGTLYDVYSVRTSCERI-FPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD 81 (230)
T ss_dssp SSCCEEEECSBTTTBCGGGGHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCceEEEEcCCCCcCcchHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCC
Confidence 568999999999999986655443322 1111000000 0000111110 13344555666666543
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCH
Q 026853 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~ 151 (232)
.... +.+...+....++|++.++++.|++.|++++++||.....+...+ +.+++..+|+.+++++..+..||++
T Consensus 82 ~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~ 155 (230)
T 3um9_A 82 ADGE-----AHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSFDHLISVDEVRLFKPHQ 155 (230)
T ss_dssp HHHH-----HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTCH
T ss_pred HHHH-----HHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhcceeEehhhcccCCCCh
Confidence 3221 222223356789999999999999999999999999999888888 8889999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC-ccccchhhhHhhhhccCcCccccCC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~l~el~~~l~~~ 221 (232)
.+++.+++++|++++++++|||+.||+.||+.+|+.+++++++.. .+..+..|+++++++.|+...+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998543 3444678999999999998887754
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=199.86 Aligned_cols=208 Identities=15% Similarity=0.217 Sum_probs=155.4
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCc---------chhhhhc----C--CC----hHHHHHHHHHHcC
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIV----G--KT----PLEEAAIIVEDYG 67 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~--~~----~~~~~~~~~~~~~ 67 (232)
+++|+|+||+||||+++...+..+. +.+...+..... ....... + .. ....+..++..++
T Consensus 2 ~~~k~i~FDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (233)
T 3umb_A 2 TSIRAVVFDAYGTLFDVYSVAARAE-QLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLN 80 (233)
T ss_dssp CCCCEEEECSBTTTEETHHHHHHHH-HHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCcccccHHHHHHHH-HHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHcC
Confidence 4689999999999999876554332 222211110000 0000110 1 01 1233445556666
Q ss_pred CCccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCC
Q 026853 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (232)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 147 (232)
........ ..+.. .+....++|++.++++.|++.|++++++||.....+...+ +.+++..+|+.+++++.....
T Consensus 81 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~ 154 (233)
T 3umb_A 81 LPLGNHAE-ATLMR----EYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVDAVRLY 154 (233)
T ss_dssp CCCCHHHH-HHHHH----HHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGGGTTCC
T ss_pred CCCCHHHH-HHHHH----HHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEecccCCC
Confidence 66443322 22222 2345788999999999999999999999999999888888 889999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC-CCccccchhhhHhhhhccCcCccccCC
Q 026853 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 148 kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~~~l~el~~~l~~~ 221 (232)
||++.+++.+++++|++++++++|||+.+|+.+|+.+|+.++++.++ +..+..+..|+++++++.|+.+.+...
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~~ 229 (233)
T 3umb_A 155 KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQAR 229 (233)
T ss_dssp TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC-
T ss_pred CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999985 444444678999999999999887653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=197.36 Aligned_cols=192 Identities=18% Similarity=0.203 Sum_probs=148.9
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHH-HH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM-FS 84 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 84 (232)
++++|+|+||+||||+++... +..+++++|............+... ........+... ..
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 63 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHD----FAAIREALSIPAEDDILTHLAALPA---------------DESAAKHAWLLEHER 63 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEEC----HHHHHHHTTCCTTSCHHHHHHHSCH---------------HHHHHHHHHHHHTHH
T ss_pred cccCCEEEEeCCCcCcccHHH----HHHHHHHhCCCchHHHHHHHhcCCh---------------HHHHHHHHHHHHHHH
Confidence 457899999999999998543 3356667777654332222211111 011111122222 22
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.......++|++.++++.|++.|++++++||+....+...+ +.+|+..+| +.+++.+. ..+||++.+++.+++++|
T Consensus 64 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g 141 (205)
T 3m9l_A 64 DLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWD 141 (205)
T ss_dssp HHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTT
T ss_pred HHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcC
Confidence 23356689999999999999999999999999999988888 889999999 77887766 889999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
++++++++|||+.||+.+|+.+|+.++++.++.. ..+..|+++++++.||...+..
T Consensus 142 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 142 VSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SCGGGCSEECSSHHHHHHHHHH
T ss_pred CCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cccccCCEEeCCHHHHHHHHHh
Confidence 9999999999999999999999999999988543 4466799999999999888764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.6e-32 Score=201.42 Aligned_cols=206 Identities=17% Similarity=0.242 Sum_probs=159.9
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh-hhcCC----------------C----hHHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGK----------------T----PLEEAAIIVE 64 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------------~----~~~~~~~~~~ 64 (232)
.|++|+|+||+||||+++...+..++..+++++|......... .+.+. . ....+..++.
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG 98 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence 4579999999999999998888999999999998876554331 11111 0 0122333444
Q ss_pred HcCCCccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc
Q 026853 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (232)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 144 (232)
.++....... ...+...+....++|++.++++.|++. ++++++||.....+...+ +.+|+. |+.+++++.+
T Consensus 99 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~~ 169 (254)
T 3umc_A 99 EFGLALDEAL-----LQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCADLF 169 (254)
T ss_dssp HTTCCCCHHH-----HHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHHHH
T ss_pred HhCCCCCHHH-----HHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeeccc
Confidence 4444422211 122233445677899999999999986 999999999998888888 888885 9999999999
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC----CC-Ccccc--chhhhHhhhhccCcCcc
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LP-KQTHR--YTAADEVINSLLDLRPE 217 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~----~~-~~~~~--~~~~~~~~~~l~el~~~ 217 (232)
+..||++.+|+.+++++|++|+++++|||+.||+.||+.+|+.++++++ |. ..... +..|+++++++.||..+
T Consensus 170 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~ 249 (254)
T 3umc_A 170 GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQ 249 (254)
T ss_dssp TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999994 33 22232 57899999999999887
Q ss_pred ccC
Q 026853 218 KWG 220 (232)
Q Consensus 218 l~~ 220 (232)
+.+
T Consensus 250 l~~ 252 (254)
T 3umc_A 250 LAA 252 (254)
T ss_dssp HHC
T ss_pred hcc
Confidence 753
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=199.78 Aligned_cols=213 Identities=19% Similarity=0.260 Sum_probs=154.6
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHH----cCCCCCcchh-----hhhcC-------CChHHH----HHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVK----YGKEWDGREK-----HKIVG-------KTPLEE----AAIIVE 64 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~-------~~~~~~----~~~~~~ 64 (232)
..+++|+|+||+||||+|+...+..++..+++. ++...+.... ....+ ...... +...+.
T Consensus 14 ~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (260)
T 2gfh_A 14 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ 93 (260)
T ss_dssp ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred ccccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHH
Confidence 346789999999999999988888888777663 4544311111 11111 111111 111222
Q ss_pred Hc-CCCccHHhHHHHHHHHHH-hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc
Q 026853 65 DY-GLPCAKHEFVNEVYSMFS-DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (232)
Q Consensus 65 ~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 142 (232)
.. +... ..+....+...+. .......++||+.++|+.|++ +++++|+||.....+...+ +.+|+..+|+.+++++
T Consensus 94 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~ 170 (260)
T 2gfh_A 94 ETKGGAD-NRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGG 170 (260)
T ss_dssp HHHCSSC-CHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGG
T ss_pred HhcCccc-hHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEecC
Confidence 11 1111 1222222222222 223457899999999999998 4999999999999888888 8899999999999999
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc-hhhhhhhhhcCC-EEEEeCCCCCc-cccchhhhHhhhhccCcCcccc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGM-EVVAVPSLPKQ-THRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~~G~-~~i~v~~~~~~-~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+.+..||+|..|..+++++|++|+++++|||+ .+|+.+|+++|+ .++++.++... ......++++++++.|+...+.
T Consensus 171 ~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 250 (260)
T 2gfh_A 171 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 250 (260)
T ss_dssp GSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999999996 899999999999 89999875333 2234678999999999987765
Q ss_pred C
Q 026853 220 G 220 (232)
Q Consensus 220 ~ 220 (232)
.
T Consensus 251 ~ 251 (260)
T 2gfh_A 251 S 251 (260)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-32 Score=202.33 Aligned_cols=207 Identities=19% Similarity=0.212 Sum_probs=154.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHH---HHHHcCCCCCc----------chhhhhcCCCh-------HHHHHHHHHHcC
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKT---FLVKYGKEWDG----------REKHKIVGKTP-------LEEAAIIVEDYG 67 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~-------~~~~~~~~~~~~ 67 (232)
|+|+|+||+||||+++...+...... .+++.|+.... ..+....+... ...+..+...++
T Consensus 1 Mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 3u26_A 1 MIRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYG 80 (234)
T ss_dssp CCCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcC
Confidence 47999999999999997654443333 33344443110 01111222211 123344444444
Q ss_pred CCccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCC
Q 026853 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (232)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 147 (232)
.... ....... .........++|++.++++.|++. ++++++||.....+...+ +.+++..+|+.+++++..+..
T Consensus 81 ~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~ 154 (234)
T 3u26_A 81 FKYP-ENFWEIS---LRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFF 154 (234)
T ss_dssp CCCC-TTHHHHH---HHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBC
T ss_pred chHH-HHHHHHH---HHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCC
Confidence 3211 1111111 112223567899999999999999 999999999999888888 889999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 148 kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
||++.+++.+++++|++|+++++|||+. ||+.||+.+|+.++++++++...+.+..|+++++++.|+...+..
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~ 228 (234)
T 3u26_A 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE 228 (234)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHH
Confidence 9999999999999999999999999998 999999999999999999877777777999999999999887653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-31 Score=194.29 Aligned_cols=203 Identities=18% Similarity=0.204 Sum_probs=148.8
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-----------hhhcCCChHH----HHHHHHHHcCCCccHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-----------HKIVGKTPLE----EAAIIVEDYGLPCAKH 73 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~~~~~~~~~ 73 (232)
+|+|+||+||||+++...+..++..+++.+........+ ....+..... .........+.....+
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAAD 87 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHH
Confidence 899999999999999888887776665544322222211 1233443333 2233333344443333
Q ss_pred hHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCC-CCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCH
Q 026853 74 EFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (232)
Q Consensus 74 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~ 151 (232)
. ...+.+.+.+. .....++|++.++++.|++.| ++++++||.....+...+ +.+++..+|+.++++ .||++
T Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~ 160 (234)
T 3ddh_A 88 I-IRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTE 160 (234)
T ss_dssp H-HHHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSH
T ss_pred H-HHHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCH
Confidence 3 33333333333 346789999999999999999 999999999988888888 888999999998754 58999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCC----CCccccch-hhhHhhhhccCcCccc
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL----PKQTHRYT-AADEVINSLLDLRPEK 218 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~----~~~~~~~~-~~~~~~~~l~el~~~l 218 (232)
.+++.+++++|++|+++++|||+. ||+.||+.+|+.+++|..+ +...+... .++++++|+.|+...+
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 999999999999999999999997 9999999999999999553 33333333 4499999999997654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-32 Score=198.86 Aligned_cols=207 Identities=16% Similarity=0.236 Sum_probs=150.2
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC---------CcchhhhhcCC--C----hHHHHHHHHHHcCCCcc
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---------DGREKHKIVGK--T----PLEEAAIIVEDYGLPCA 71 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~ 71 (232)
|++|+|+||+||||+++...+..++..+ ...+... .........+. . ....+...+..++....
T Consensus 12 M~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (240)
T 2no4_A 12 DSLRACVFDAYGTLLDVHSAVMRNADEV-GASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDR 90 (240)
T ss_dssp SCCCEEEECCBTTTBCTTHHHHTTHHHH-CTTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCTTH
T ss_pred ccccEEEEeCCCcccccHhHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 4589999999999999976655333311 1000000 00000001110 0 11222333444444322
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCH
Q 026853 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (232)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~ 151 (232)
. +.... +.+.+....++|++.++|+.|++.|++++++||+....+...+ +.+|+..+|+.++++++.+..||+|
T Consensus 91 ~-~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~ 164 (240)
T 2no4_A 91 K-GLKDR----LMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDP 164 (240)
T ss_dssp H-HHHHH----HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSH
T ss_pred H-HHHHH----HHHHHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCH
Confidence 1 11222 2223345789999999999999999999999999999888888 8899999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhh-hHhhhhccCcCccccC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA-DEVINSLLDLRPEKWG 220 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~-~~~~~~l~el~~~l~~ 220 (232)
..++.+++++|++|+++++|||+.+|+.+|+.+|+.++++.+++........+ +++++++.|+...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 234 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAK 234 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999976543345667 9999999999887653
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=198.76 Aligned_cols=125 Identities=12% Similarity=0.085 Sum_probs=109.6
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh---cCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
....++||+.++|+.|+++|++++|+||+....+...+ ++ .++..+|+.++++ +.+ .||+|..|..+++++|++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~ 203 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCS 203 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence 45789999999999999999999999999998888777 64 4699999999988 788 999999999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc-c-cchhhhHhhhhccCcC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-H-RYTAADEVINSLLDLR 215 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~-~~~~~~~~~~~l~el~ 215 (232)
|++|+||||+.+|+.+|+++|+.+++|.++.... . ....++++++++.|+.
T Consensus 204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 204 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 9999999999999999999999999998743322 2 2356889999998873
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=191.67 Aligned_cols=206 Identities=16% Similarity=0.234 Sum_probs=149.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC---------CcchhhhhcCC--C----hHHHHHHHHHHcCCCccH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---------DGREKHKIVGK--T----PLEEAAIIVEDYGLPCAK 72 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~ 72 (232)
++|+|+||+||||+++...+..++..+ ...+... .........+. . ....+..++..++.....
T Consensus 3 m~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
T 1zrn_A 3 YIKGIAFDLYGTLFDVHSVVGRCDEAF-PGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDA 81 (232)
T ss_dssp CCCEEEECSBTTTEETHHHHHHHHHHS-TTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred CceEEEEecCCcccCchhhHHHHHHHc-cccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCCCH
Confidence 579999999999999977655443311 1000000 00000001110 0 112233344445544332
Q ss_pred HhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHH
Q 026853 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (232)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~ 152 (232)
.. . ..+...+....++|++.++|+.|++.|++++++||+....+...+ +.+++..+|+.++++++....||+|.
T Consensus 82 ~~-~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~ 155 (232)
T 1zrn_A 82 RT-R----STLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNR 155 (232)
T ss_dssp HH-H----HHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHH
T ss_pred HH-H----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheEEEecccCCCCCCHH
Confidence 11 1 122233445788999999999999999999999999998888888 88999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-cccchhhhHhhhhccCcCccccC
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
.++.+++++|++|+++++|||+.+|+.+|+.+|+.++++.++... +.....++++++++.|+...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 224 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFET 224 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC--
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999985433 33356789999999999877654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=193.98 Aligned_cols=206 Identities=18% Similarity=0.243 Sum_probs=153.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHH---cCCCCCcch------hhhh-------cCCC----hHHHHHHHHHHcC
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK---YGKEWDGRE------KHKI-------VGKT----PLEEAAIIVEDYG 67 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~-------~~~~----~~~~~~~~~~~~~ 67 (232)
|+|+|+||+||||+++...+..+...+++. .+....... +... .... .......++...+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 479999999999999987777665554443 232221110 0000 0001 1122334445555
Q ss_pred CCcc-HHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCC
Q 026853 68 LPCA-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 146 (232)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 146 (232)
.+.. ...+...+.+.+........++|++.++++.|++. ++++++||+... + +.+++..+|+.+++++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l-~~~~l~~~f~~~~~~~~~~~ 153 (230)
T 3vay_A 81 YDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V-RRLGLADYFAFALCAEDLGI 153 (230)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G-GGSTTGGGCSEEEEHHHHTC
T ss_pred CChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h-hhcCcHHHeeeeEEccccCC
Confidence 5421 12233334444444456778999999999999998 999999999765 5 77899999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
.||++.+++.+++++|++|+++++|||+. ||+.+|+.+|+.++++.++.........++++++++.|+.+.+..
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 99999999999999999999999999998 999999999999999999655444477899999999999887754
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=196.76 Aligned_cols=204 Identities=21% Similarity=0.293 Sum_probs=159.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh-
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (232)
++|+|+||+||||+++...+..++..++++++............|.........+.... ...+....+...+.+.
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 109 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKFAPDF----ADEEYVNKLEGEIPEKY 109 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHHHHTTCTTCCHHHHHHHCTTCCHHHHHHHHCGGG----CCHHHHHHHHHTHHHHH
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCCCCHHHHHHHhcCCCHHHHHHHHhccC----CcHHHHHHHHHHHHHHH
Confidence 48999999999999999888888888888887411222334445666555544443321 1122333333333322
Q ss_pred hccCCCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC--
Q 026853 87 LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-- 163 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~-- 163 (232)
.....+.|++.++++.|++. |++++++|+.....+...+ +.+++. .|+.++++++....||+|.++..+++++|+
T Consensus 110 ~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 34567899999999999999 9999999999998888888 778886 488889998889999999999999999999
Q ss_pred -----CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhhhhccCcCcc
Q 026853 164 -----EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPE 217 (232)
Q Consensus 164 -----~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~~l~el~~~ 217 (232)
++++|++|||+.||+.||+.+|+.+++|.+++...+. +..|+++++++.|+...
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~ 247 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG 247 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence 9999999999999999999999999999997664444 34689999999998654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=190.63 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=151.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHH---HHcCCCC---Ccch-----hh--hhcCCChHHHHHHHH----HHcCCCc
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFL---VKYGKEW---DGRE-----KH--KIVGKTPLEEAAIIV----EDYGLPC 70 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~---~~~~~~~---~~~~-----~~--~~~~~~~~~~~~~~~----~~~~~~~ 70 (232)
++|+|+||+||||+++...+..++..++ .++|... .... .. ...|.........+. ...+...
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARI 91 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999988888888777 4566554 1111 11 245666555444433 2334333
Q ss_pred cHHhHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCC
Q 026853 71 AKHEFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (232)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp 149 (232)
. ......+.+.+.+. .....++|++.++|+.|+ .|++++++||+....+...+ +.+++..+|+.++++ .||
T Consensus 92 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~kp 163 (251)
T 2pke_A 92 E-ARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SEK 163 (251)
T ss_dssp C-HHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SCC
T ss_pred C-hHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CCC
Confidence 2 22333333333332 345788999999999999 88999999999988888888 888999999988763 689
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcc----c-c-chhhhH-hhhhccCcCcccc
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----H-R-YTAADE-VINSLLDLRPEKW 219 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~----~-~-~~~~~~-~~~~l~el~~~l~ 219 (232)
++..+..+++++|++++++++|||+. ||+.+|+.+|+.++++.++.... + . ...+++ +++++.|+.+.+.
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 241 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVR 241 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999998764321 1 1 356887 8999999987664
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=179.56 Aligned_cols=177 Identities=22% Similarity=0.229 Sum_probs=138.8
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
|++|+|+||+||||+++...+..++.++++++|...+...+....+.... ..+....+.. ......+...+.+.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~ 77 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTP---FAIETFAPNL---ENFLEKYKENEARE 77 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHH---HHHHHHCTTC---TTHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccH---HHHHHHhhhH---HHHHHHHHHHHHHh
Confidence 35899999999999999888888999999999887665554433322221 2222323211 12233333334433
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
.....++|++.++++.|++.|++++++||... .+...+ +.+++..+|+.++++++....||++..++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-- 153 (190)
T 2fi1_A 78 LEHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS-- 153 (190)
T ss_dssp TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--
T ss_pred cCcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--
Confidence 33344899999999999999999999999865 466677 88899999999999999999999999999999999998
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++++|||+.||+.+|+.+|+.++++++
T Consensus 154 ~~~~iGD~~~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 154 SGLVIGDRPIDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred eEEEEcCCHHHHHHHHHcCCeEEEECC
Confidence 999999999999999999999999987
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=186.23 Aligned_cols=201 Identities=11% Similarity=0.052 Sum_probs=137.2
Q ss_pred cccEEEEeCCCcccccHHH-------HHHHHHHHHHHcCCCCCcc-hhhhhcCCChHHHHHHHHHHcCCCccH---HhH-
Q 026853 8 LMSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAK---HEF- 75 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~- 75 (232)
++|+|+||+||||+|+... +...+...+.+++...... .+....+.........+...++..... ..+
T Consensus 30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 109 (253)
T 2g80_A 30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 109 (253)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHHH
Confidence 4899999999999999643 3334455555565433222 223334445555555555544332211 111
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc-----------CCccccceeeccccc
Q 026853 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-----------GWNESFSVIVGSDEV 144 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-----------~l~~~~~~~~~~~~~ 144 (232)
...+...+........++||+.++|+. |++++|+||++...+...+ ++. ++..+|+.++.+ .+
T Consensus 110 ~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~~ 183 (253)
T 2g80_A 110 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-NT 183 (253)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-HH
T ss_pred HHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-ec
Confidence 112333333333356789999999988 8999999999999888887 655 466677776654 23
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCc
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el 214 (232)
...||+|..|..+++++|++|++|+||||+.+|+.+|+++|+.++++.+..........++.+++++.||
T Consensus 184 ~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 184 SGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred cCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 1259999999999999999999999999999999999999999999987322221112367778887765
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=191.93 Aligned_cols=207 Identities=14% Similarity=0.148 Sum_probs=149.8
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHc---CCCCCcchhhhhcCC---ChHHHHHHHHHHcCCCccHHhHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGK---TPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (232)
.++|+|+||+||||+++...+..++..++.++ +...+.......... ........+....+.+ ..+. .
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~----~ 128 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVN--ALEY----N 128 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSSC--HHHH----H
T ss_pred CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCCC--HHHH----H
Confidence 46899999999999999776666666665543 222222222111100 0011223333444433 2222 2
Q ss_pred HHHHhh---hccCCCCCcHHHHHHHHHhCCC--CEEEEeCCchHHHHHHHhhhcCCccccceeeccccc----CCCCCCH
Q 026853 81 SMFSDH---LCKVKALPGANRLIKHLSCHGV--PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSP 151 (232)
Q Consensus 81 ~~~~~~---~~~~~~~~~~~~~l~~l~~~g~--~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~----~~~kp~~ 151 (232)
..+... .....++|++.++|+.|++.|+ +++++||+....+...+ +.+|+..+|+.+++++.. ...||++
T Consensus 129 ~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~ 207 (282)
T 3nuq_A 129 RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHV 207 (282)
T ss_dssp HHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSH
T ss_pred HHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCH
Confidence 222222 2347789999999999999999 99999999999888888 889999999999977654 5679999
Q ss_pred HHHHHHHHhcCCCC-CcEEEEeCchhhhhhhhhcCC-EEEEeCCCCCcc--ccchhhhHhhhhccCcCccccC
Q 026853 152 DIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGM-EVVAVPSLPKQT--HRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 152 ~~~~~~~~~~~~~~-~~~~~vgD~~~Di~~a~~~G~-~~i~v~~~~~~~--~~~~~~~~~~~~l~el~~~l~~ 220 (232)
.+++.+++++|+++ +++++|||+.||+.||+.+|+ .++++..+.... .....++++++++.||.+.+..
T Consensus 208 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~ 280 (282)
T 3nuq_A 208 KAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSD 280 (282)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGG
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhh
Confidence 99999999999999 999999999999999999999 566666644332 2256789999999999887754
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-31 Score=190.93 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=140.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh----cCCCh--HH------HHHHHHHHcCCCccHHhH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI----VGKTP--LE------EAAIIVEDYGLPCAKHEF 75 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~------~~~~~~~~~~~~~~~~~~ 75 (232)
++|+|+||+||||+++...+..++..+++++|...+...+... .+... .. .+..+++.++... ..+.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~ 80 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP-SERL 80 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC-CHHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC-cHHH
Confidence 5799999999999999877778888888999877654433211 12111 00 0345556666543 2233
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHH
Q 026853 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 155 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~ 155 (232)
...+.+.+. ......++||+.++|+.|++.|++++++||+... +...+ +.+|+..+|+.++++++.+..||+|..|.
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (220)
T 2zg6_A 81 VKELKEADI-RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFG 157 (220)
T ss_dssp HHHHHHTTT-TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHH-HHHTCGGGCSEEC-----------CCHHH
T ss_pred HHHHHHHhh-cccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence 333322111 1234678999999999999999999999999774 67777 88999999999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEeCchh-hhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 156 EAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~vgD~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
.+++++|++| ++|||+.+ |+.+|+++|+.++++.++...... +++++++.|+.+.+.
T Consensus 158 ~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~el~~~l~ 215 (220)
T 2zg6_A 158 FALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLREALQKIE 215 (220)
T ss_dssp HHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHHHHHHHH
T ss_pred HHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHHHHHHHH
Confidence 9999999988 99999998 999999999999999874322221 567788888876654
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=184.80 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=146.9
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC---------CcchhhhhcCC--C----hHHHHHHHHHHcCCCccH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---------DGREKHKIVGK--T----PLEEAAIIVEDYGLPCAK 72 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~ 72 (232)
|+|+|+||+||||+++...+..++.. +...+... .........+. . ....+..++..++.....
T Consensus 1 M~k~viFDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T 1qq5_A 1 MIKAVVFDAYGTLFDVQSVADATERA-YPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDE 79 (253)
T ss_dssp CCCEEEECTBTTTBCTTTTHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCH
T ss_pred CCcEEEEeCCCCCCccHhhHHHHHHH-HhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCCCCH
Confidence 36899999999999986554433331 11110000 00000001110 0 112333444444443222
Q ss_pred HhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHH
Q 026853 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (232)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~ 152 (232)
. . ...+.+.+....++|++.++|+.|+ |++++++||.....+...+ +.+|+..+|+.++++++.+..||+|.
T Consensus 80 ~-~----~~~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~ 151 (253)
T 1qq5_A 80 S-F----LADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPD 151 (253)
T ss_dssp H-H----HHHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHH
T ss_pred H-H----HHHHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccEEEEccccCCCCCCHH
Confidence 1 1 1222333445689999999999999 8999999999999888888 88899999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC-----------------------CCCc-cccchhhhHhh
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS-----------------------LPKQ-THRYTAADEVI 208 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~-----------------------~~~~-~~~~~~~~~~~ 208 (232)
.++.+++++|++|+++++|||+.+|+.+|+.+|+.++++++ +... ...+..+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 99999999999999999999999999999999999999987 3222 23356789999
Q ss_pred hhccCcCccccCC
Q 026853 209 NSLLDLRPEKWGL 221 (232)
Q Consensus 209 ~~l~el~~~l~~~ 221 (232)
+|+.|+...+..+
T Consensus 232 ~~~~el~~~l~~~ 244 (253)
T 1qq5_A 232 PALGDLPRLVRGM 244 (253)
T ss_dssp SSGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 9999998877543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=187.41 Aligned_cols=196 Identities=17% Similarity=0.209 Sum_probs=139.9
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (232)
+|+|+||+||||+++...+.. +......++.... ...+....+. ....+..++..++ . . .....+.+. +
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~--~-~~~~~~~~~----~ 70 (201)
T 2w43_A 1 MIILAFDIFGTVLDTSTVIQE-FRNKQLEYTWLLTIMGKYVEFEEI-TKITLRYILKVRG-E--E-SKFDEELNK----W 70 (201)
T ss_dssp CCEEEECCBTTTEEGGGSCHH-HHHHHHHHHHHHHHHTCCCCHHHH-HHHHHHHHHHHTT-C--G-GGHHHHHHH----H
T ss_pred CcEEEEeCCCceecchhHHHH-HHHHHHHHHHHHHHccCcccHHHH-HHHHHHHHHHHhC-C--h-HHHHHHHHh----h
Confidence 478999999999998654332 2222111110000 0000000000 1223344444443 1 1 112222222 2
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
....++||+.+ |+.|++. ++++++||.....+...+ +++|+..+|+.++++++....||+|..+..+++++| +++
T Consensus 71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~ 145 (201)
T 2w43_A 71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE 145 (201)
T ss_dssp HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence 34688999999 9999999 999999999988888888 889999999999999999999999999999999999 999
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCCCCC-ccccchhhhHhhhhccCcCcccc
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+++|||+.+|+.+|+.+|+.++++.++.. .+.....++++++++.|+.+.+.
T Consensus 146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 198 (201)
T 2w43_A 146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWIL 198 (201)
T ss_dssp CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHH
T ss_pred EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999998543 33335578999999999876653
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=180.53 Aligned_cols=177 Identities=17% Similarity=0.171 Sum_probs=131.9
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCC-----------ChHHHHHHHHHHcCCCccHHhH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-----------TPLEEAAIIVEDYGLPCAKHEF 75 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 75 (232)
+|+|+|+||+||||+++...+. ...+++++.....+......+. ........+...++.......+
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQV 79 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHH
T ss_pred ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 3589999999999999866443 4555666655433222222221 2233333444444432222221
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh------cCCccccceeecccccCCCCC
Q 026853 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKP 149 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~------~~l~~~~~~~~~~~~~~~~kp 149 (232)
. ..+.. ....++|++.++++.|++ |++++++||.....+...+ +. +++..+|+.+++++..+..||
T Consensus 80 ~----~~~~~--~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp 151 (211)
T 2i6x_A 80 Y----DALLG--FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKP 151 (211)
T ss_dssp H----HHHGG--GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTT
T ss_pred H----HHHHH--hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCC
Confidence 1 11111 134678999999999999 9999999999988888777 76 799999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+|..++.+++++|++|+++++|||+.+|+.+|+.+|+.+++++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999999999999999999884
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=182.99 Aligned_cols=180 Identities=21% Similarity=0.202 Sum_probs=137.0
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhh----------cC-CChHHHHHHHHHHcCCCccHHhH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI----------VG-KTPLEEAAIIVEDYGLPCAKHEF 75 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~ 75 (232)
+++|+|+||+||||+++.. ..+...++++|........... .+ .........+.+.++.....+++
T Consensus 26 ~~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQI 102 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHH
T ss_pred CCCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4689999999999999863 3445566677765433333221 12 24455556666666655544443
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHh-----hhcCCccccceeecccccCCCCCC
Q 026853 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTGKPS 150 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~-----~~~~l~~~~~~~~~~~~~~~~kp~ 150 (232)
...+ .... ..+.|++.++|+.|++. ++++++||+........+. +.+++..+|+.++++++.+..||+
T Consensus 103 ~~~~----~~~~--~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~ 175 (229)
T 4dcc_A 103 DAAW----NSFL--VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPE 175 (229)
T ss_dssp HHHH----HTTB--CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTC
T ss_pred HHHH----HHHH--HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCC
Confidence 3322 2222 24679999999999998 9999999999887764441 346788899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~ 196 (232)
|.+|+.+++++|++|++|++|||+.+|+.+|+++|+.+++++++..
T Consensus 176 ~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 176 PEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred HHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 9999999999999999999999999999999999999999998543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=176.92 Aligned_cols=177 Identities=19% Similarity=0.240 Sum_probs=131.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hhh------cC-CChHHHHHHHHHHcCCCccHHhHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI------VG-KTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
++|+|+||+||||+++.. ...++..++++++........ ... .+ ......+..+....+.....+ .+
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 77 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPE----DF 77 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHH----HH
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHH----HH
Confidence 579999999999999753 245667777777764322211 110 11 112222222221111111111 12
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
.+.+ .....++|++.++|+.|++.| +++++||.....+...+ +.+|+..+|+.+++++.....||+|..++.+++
T Consensus 78 ~~~~---~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 78 RAVM---EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLT 152 (200)
T ss_dssp HHHH---HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHH
T ss_pred HHHH---HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHH
Confidence 2221 234568999999999999999 99999999999888888 888999999999999999999999999999999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
++|++++++++|||+.+|+.+|+.+|+.++++.++
T Consensus 153 ~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 153 LAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 99999999999999999999999999999999873
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-30 Score=186.98 Aligned_cols=202 Identities=15% Similarity=0.135 Sum_probs=143.8
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCc------chhhhhcCCCh-HHHHHHHHHHcCCCccHHhHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG------REKHKIVGKTP-LEEAAIIVEDYGLPCAKHEFVNEV 79 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
.++|+|+||+||||+|+...+..++..+++++|..... ..+....+... ...+..+....... .....+
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~ 84 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD----TRLLLM 84 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC----TGGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc----hHHHHH
Confidence 46789999999999999998888999999888865332 12222334331 22222222222111 111222
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
.+.+........++||+.++|+.|++.| +++|+||+....+...+ +.+|+..+|+.++.. . ++++..++.+++
T Consensus 85 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~---~--~~K~~~~~~~~~ 157 (231)
T 2p11_A 85 SSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI---Y--IHKELMLDQVME 157 (231)
T ss_dssp HHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE---E--SSGGGCHHHHHH
T ss_pred HHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe---c--CChHHHHHHHHh
Confidence 2333333345689999999999999999 99999999999898888 888998888875542 2 334567777666
Q ss_pred hcCCCCCcEEEEeCchh---hhhhhhhcCCEEEEeCCCCC--cc-ccch--hhhHhhhhccCcCccccCC
Q 026853 160 RLNMEPSSSLVIEDSVI---GVVAGKAAGMEVVAVPSLPK--QT-HRYT--AADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~---Di~~a~~~G~~~i~v~~~~~--~~-~~~~--~~~~~~~~l~el~~~l~~~ 221 (232)
+++|+++++|||+.+ |+.+|+++|+.++++.++.. .. .... .++++++++.|+...+...
T Consensus 158 --~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~ 225 (231)
T 2p11_A 158 --CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEW 225 (231)
T ss_dssp --HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGG
T ss_pred --cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHH
Confidence 789999999999999 99999999999999998642 21 2222 3899999999998877643
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-29 Score=180.78 Aligned_cols=194 Identities=15% Similarity=0.151 Sum_probs=134.5
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh--hhhcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++|+|+||+||||++++.. ..+.+.++........ +...+ ......+........ .... +.+
T Consensus 2 ~~~k~vifDlDGTL~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~ 67 (217)
T 3m1y_A 2 SLQKLAVFDFDSTLVNAETI-----ESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLK-NMPL--------KLA 67 (217)
T ss_dssp CCCEEEEEECBTTTBSSCHH-----HHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTT-TCBH--------HHH
T ss_pred CCCcEEEEeCCCCCCCchhH-----HHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhc-CCCH--------HHH
Confidence 36899999999999997542 2333444432111111 00111 122222222222211 1111 112
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeec----------ccccCCCCCCHHH
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDI 153 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~----------~~~~~~~kp~~~~ 153 (232)
.+.....++.|++.++++.|++.|++++++||+....+...+ +.+|+..+|+.+++ +.....+||++.+
T Consensus 68 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 68 KEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp HHHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred HHHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence 223344789999999999999999999999999999998888 88999999988863 3345678999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh--hccCcCcccc
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRPEKW 219 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~l~el~~~l~ 219 (232)
++.+++++|++++++++|||+.+|+.+|+.+|+.+++ + ..+..+..|+++++ ++.++.+++.
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~---~~~~l~~~ad~v~~~~dl~~~~~~~~ 210 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-N---AKEVLKQHATHCINEPDLALIKPLIE 210 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-S---CCHHHHTTCSEEECSSBGGGGTTC--
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-C---ccHHHHHhcceeecccCHHHHHHHhc
Confidence 9999999999999999999999999999999998766 3 35566778888884 5666665544
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-29 Score=178.95 Aligned_cols=178 Identities=15% Similarity=0.151 Sum_probs=128.1
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcC-----------CChHHHHHHHHHHcCCCccHHhH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-----------KTPLEEAAIIVEDYGLPCAKHEF 75 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 75 (232)
+++|+|+||+||||+++.. ..+...+.+++............+ .........+...++......++
T Consensus 5 ~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 81 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQF 81 (206)
T ss_dssp -CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHH
T ss_pred ccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4689999999999999862 112233333333322222222211 22333444444555443332222
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh-cCCccccceeecccccCCCCCCHHHH
Q 026853 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIF 154 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~~l~~~~~~~~~~~~~~~~kp~~~~~ 154 (232)
. +.+.. ....++|++.++|+.|++.|++++++||+........+ .. +|+..+|+.+++++..+..||+|..+
T Consensus 82 ~----~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~ 154 (206)
T 2b0c_A 82 S----HGWQA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIY 154 (206)
T ss_dssp H----HHHHT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHH
T ss_pred H----HHHHH--HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHHH
Confidence 1 11211 12578999999999999999999999999877765555 44 67888899999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
..+++++|++++++++|||+.+|+.+|+.+|+.+++++++
T Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 9999999999999999999999999999999999999874
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-28 Score=175.90 Aligned_cols=131 Identities=18% Similarity=0.239 Sum_probs=115.8
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCch---HHHHHHHhhhcCCccccceeeccccc----CCCCCCHHHHHHHHHh
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKR 160 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~l~~~~~~~~~~~~~----~~~kp~~~~~~~~~~~ 160 (232)
....++||+.++|+.|++.|++++++||+.. ..+...+ +.+|+..+|+.++++++. +..||+|..|+.++++
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence 3468999999999999999999999999976 7788888 899999999999999876 7889999999999999
Q ss_pred cCCCCCcEEEEeCc-hhhhhhhhhcCCEEEEeCCCCCc---ccc-chhhhHhhh--hccCcCcccc
Q 026853 161 LNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQ---THR-YTAADEVIN--SLLDLRPEKW 219 (232)
Q Consensus 161 ~~~~~~~~~~vgD~-~~Di~~a~~~G~~~i~v~~~~~~---~~~-~~~~~~~~~--~l~el~~~l~ 219 (232)
+|++|+++++|||+ .+|+.+|+++|+.++++.++... ... ...++++++ +++||.+++.
T Consensus 110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 99999999999999 69999999999999999986542 222 238899999 9999987765
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=173.69 Aligned_cols=126 Identities=20% Similarity=0.209 Sum_probs=106.6
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC-C
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-S 166 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~ 166 (232)
....++||+.++|+.|+++|++++|+|+.........+ + .+|+.++++++....||+|..+..+++++++.+ +
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~----~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA----A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH----T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc----C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 34578999999999999999999999999887764333 3 468999999999999999999999999999975 8
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc------------------------c-cchhhhHhhhhccCcCcccc
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT------------------------H-RYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~------------------------~-~~~~~~~~~~~l~el~~~l~ 219 (232)
++++|||+.+|+.+|+++|+.+|+|.+|.... . ....++++++++.||...+.
T Consensus 107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~ 184 (196)
T 2oda_A 107 GCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLA 184 (196)
T ss_dssp TCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHH
Confidence 99999999999999999999999999865420 0 02468889999999977654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-29 Score=187.05 Aligned_cols=204 Identities=19% Similarity=0.214 Sum_probs=144.2
Q ss_pred cccEEEEeCCCcccccHHHHHHH--HHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhH---HHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEV--LKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSM 82 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 82 (232)
++|+|+||+||||+++...+..+ +...+++.|+.... .....+.........+. ..+........ ......+
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~--~t~~~g~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 78 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVL--LTNYPSQTGQDLANRFA-TAGVDVPDSVFYTSAMATADF 78 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEE--EESCCSCCHHHHHHHHH-HTTCCCCGGGEEEHHHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEE--EECCCCCCHHHHHHHHH-HcCCCCCHHHeEcHHHHHHHH
Confidence 57999999999999986555444 44556677765432 22233565555555444 35554222211 1112222
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEE---------------------------------EEeCCchHHHHHHHhhhc
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMA---------------------------------LASNSHRATIESKISYQH 129 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~---------------------------------i~s~~~~~~~~~~l~~~~ 129 (232)
.........+.+++.++++.+++.|++++ ++|+.. ......+ +.+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~-~~~ 156 (250)
T 2c4n_A 79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY-PAC 156 (250)
T ss_dssp HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC-BCH
T ss_pred HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee-ecc
Confidence 22233445678899999999999999988 888876 3333233 334
Q ss_pred C-CccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc-hhhhhhhhhcCCEEEEeCCCCCcccc-c---hh
Q 026853 130 G-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-Y---TA 203 (232)
Q Consensus 130 ~-l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~---~~ 203 (232)
+ +..+|+.+.+.+....+||++.+++.+++++|++++++++|||+ .||+.|++.+|+.+++|.+|+...+. + ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~ 236 (250)
T 2c4n_A 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR 236 (250)
T ss_dssp HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSC
T ss_pred hHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCC
Confidence 4 45556666667777889999999999999999999999999999 69999999999999999998765333 2 57
Q ss_pred hhHhhhhccCcCc
Q 026853 204 ADEVINSLLDLRP 216 (232)
Q Consensus 204 ~~~~~~~l~el~~ 216 (232)
|+++++++.|+.+
T Consensus 237 ~~~v~~~~~el~~ 249 (250)
T 2c4n_A 237 PSWIYPSVAEIDV 249 (250)
T ss_dssp CSEEESSGGGCCC
T ss_pred CCEEECCHHHhhc
Confidence 9999999999864
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=173.22 Aligned_cols=128 Identities=20% Similarity=0.257 Sum_probs=109.4
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccccceee-----cccccCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-----GSDEVRTGK 148 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~~~~~~-----~~~~~~~~k 148 (232)
...++||+.++|+.|+++|++++++||++. ..+...+ +.+| .+|+.++ +++.....|
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACRK 101 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSST
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCCC
Confidence 457899999999999999999999999986 4556666 6667 3455544 357778899
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccc----hhhhHhhhhccCcCcccc
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDLRPEKW 219 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~----~~~~~~~~~l~el~~~l~ 219 (232)
|+|..|+.+++++|++|+++++|||+.+|+.+|+++|+.+++|.+|+...... ..|+++++++.|+.+.+.
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977655443 678999999999988765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=172.94 Aligned_cols=195 Identities=14% Similarity=0.148 Sum_probs=132.1
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcc-hhhhhcCC--ChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
+++|+|+||+||||+++.. +..+++.+|...... ......+. .....+......... .. ..+.+.+
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~ 80 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SR----EQVQRLI 80 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CH----HHHHHHH
T ss_pred hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcC--CH----HHHHHHH
Confidence 4689999999999999854 345677777654322 22222222 222222222222211 11 1122222
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc--ccceee--------cccccC----CCCC
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIV--------GSDEVR----TGKP 149 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~--~~~~~~--------~~~~~~----~~kp 149 (232)
.. ...+++||+.++|+.|+++|++++|+||+....+...+ +++|+.. +|+.++ ++.+.. ..+|
T Consensus 81 ~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
T 1nnl_A 81 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 157 (225)
T ss_dssp HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred Hh--ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCc
Confidence 21 24678999999999999999999999999999998888 8889874 776653 333322 1367
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
+|..++.+++++|+ +++++|||+.+|+.+|+++|+ ++++..+.........++++++++.|+...+
T Consensus 158 Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 158 KGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred hHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 88999999999998 789999999999999999999 7888653333333567899999999997765
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=171.87 Aligned_cols=129 Identities=22% Similarity=0.252 Sum_probs=110.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCc---------------hHHHHHHHhhhcCCccccceeec------------c
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG------------S 141 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~~~l~~~~~~~~~------------~ 141 (232)
...++||+.++|++|+++|++++++||+. ...+...+ +.+|+. |+.++. +
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccC
Confidence 45789999999999999999999999998 46677777 788886 776653 2
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEE-EEeCCCCCcccc-chhhhHhhhhccCcCcccc
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~-~~~~~~~~~~l~el~~~l~ 219 (232)
+....+||+|.+|+.++++++++++++++|||+.+|+.+|+++|+.+ ++|.++....+. ...++++++++.|+.+++.
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l~ 204 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 204 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHHH
Confidence 44677999999999999999999999999999999999999999999 999987644333 3568999999999988765
Q ss_pred C
Q 026853 220 G 220 (232)
Q Consensus 220 ~ 220 (232)
.
T Consensus 205 ~ 205 (211)
T 2gmw_A 205 K 205 (211)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-27 Score=177.51 Aligned_cols=208 Identities=16% Similarity=0.163 Sum_probs=140.5
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHH--HHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHH---HHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVY 80 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 80 (232)
++++|+|+||+||||+++...+..+.. ..+++.|+.. .......+........ .+...+.+....... ....
T Consensus 4 ~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~--~~~t~~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~~ 80 (259)
T 2ho4_A 4 RRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMV--RFVTNTTKETKKDLLE-RLKKLEFEISEDEIFTSLTAAR 80 (259)
T ss_dssp --CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEE--EEEECCSSCCHHHHHH-HHHHTTCCCCGGGEEEHHHHHH
T ss_pred hhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeE--EEEeCCCCcCHHHHHH-HHHHcCCCccHHHeecHHHHHH
Confidence 457999999999999998765443332 3455666543 2222233444444443 345666654322211 0111
Q ss_pred HHHHhh---------------h----------------ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc
Q 026853 81 SMFSDH---------------L----------------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129 (232)
Q Consensus 81 ~~~~~~---------------~----------------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~ 129 (232)
...... + ....+++++.++++.++ .|+++ ++||.........+ ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~~~ 157 (259)
T 2ho4_A 81 NLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-LAL 157 (259)
T ss_dssp HHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-EEE
T ss_pred HHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-ccc
Confidence 111110 0 01126788999999999 88999 99998766554455 667
Q ss_pred CCccccc---eeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCC-cccc---c
Q 026853 130 GWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR---Y 201 (232)
Q Consensus 130 ~l~~~~~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~-~~~~---~ 201 (232)
++..+|+ .+++++....+||+|.+++.+++++|++|+++++|||+. ||+.||+.+|+.+++|.+|.. ..+. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ 237 (259)
T 2ho4_A 158 GPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKIN 237 (259)
T ss_dssp CSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSS
T ss_pred CCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccC
Confidence 7877776 556777888899999999999999999999999999999 999999999999999998743 2222 3
Q ss_pred hhhhHhhhhccCcCcccc
Q 026853 202 TAADEVINSLLDLRPEKW 219 (232)
Q Consensus 202 ~~~~~~~~~l~el~~~l~ 219 (232)
..++++++++.|+...+.
T Consensus 238 ~~~~~~~~~l~~l~~~l~ 255 (259)
T 2ho4_A 238 PPPYLTCESFPHAVDHIL 255 (259)
T ss_dssp SCCSEEESCHHHHHHHHH
T ss_pred CCCCEEECCHHHHHHHHH
Confidence 568899999999876653
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-27 Score=176.76 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=137.5
Q ss_pred cccEEEEeCCCcccccHHHHHHHHH--HHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHH-------H-
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV-------N- 77 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~- 77 (232)
++|+|+||+||||+++...+..+.. ..+.+.|.... ......+.........+.+.++.+...+.+. .
T Consensus 4 ~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~--~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 81 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFL--FVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDY 81 (264)
T ss_dssp SCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEE--EEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHHH
T ss_pred cCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEE--EEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHHHHH
Confidence 5899999999999997544443322 33445555432 1222223333333333333355543211110 0
Q ss_pred ----------------HHHHHHHhh---------------hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH--HHHH
Q 026853 78 ----------------EVYSMFSDH---------------LCKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESK 124 (232)
Q Consensus 78 ----------------~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--~~~~ 124 (232)
.+.+.+.+. .....++|++.++++.|+ .|+++ ++||..... ....
T Consensus 82 ~~~~~~~~~~~~~g~~~l~~~l~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~ 159 (264)
T 1yv9_A 82 MKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGL 159 (264)
T ss_dssp HHHHCCCSEEEEESCHHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEE
T ss_pred HHhhCCCCEEEEEeCHHHHHHHHHcCCcccCCCCCEEEEECCCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCc
Confidence 111112111 123457889999999997 78887 889987632 1111
Q ss_pred HhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc-ch
Q 026853 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-YT 202 (232)
Q Consensus 125 l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~~ 202 (232)
+....++..+|+.+++++....+||+|.+|+.+++++|++|+++++|||+. +|+.+|+++|+.+++|.+|....+. ..
T Consensus 160 ~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~ 239 (264)
T 1yv9_A 160 LPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPT 239 (264)
T ss_dssp EECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTT
T ss_pred ccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHh
Confidence 113334667788888888888999999999999999999999999999995 9999999999999999997665432 22
Q ss_pred ---hhhHhhhhccCcCcc
Q 026853 203 ---AADEVINSLLDLRPE 217 (232)
Q Consensus 203 ---~~~~~~~~l~el~~~ 217 (232)
.|+++++++.|+...
T Consensus 240 ~~~~~d~v~~~l~el~~~ 257 (264)
T 1yv9_A 240 LPTPPTYVVDSLDEWTFE 257 (264)
T ss_dssp CSSCCSEEESSGGGCCTT
T ss_pred cCCCCCEEEecHHHHhhc
Confidence 689999999998653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=176.61 Aligned_cols=195 Identities=12% Similarity=0.076 Sum_probs=132.7
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh--hhcCC-ChHHHHHHHHHHcCCCccHHhHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (232)
..+.|+|+||+||||+++... ..+.+.++......... ...+. .....+...+.... ... .+ .
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~-~~~-~~-------~ 170 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLK-GTP-KA-------V 170 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT-TCB-HH-------H
T ss_pred CCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCC-HH-------H
Confidence 356799999999999998653 33344455422221111 11111 12222222222211 111 11 1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc----------cccCCCCCCHH
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----------DEVRTGKPSPD 152 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~----------~~~~~~kp~~~ 152 (232)
+........++||+.++++.|++.|++++++||+....+...+ +.+|+..+|+.++.. .....+||++.
T Consensus 171 i~~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~ 249 (317)
T 4eze_A 171 LNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQ 249 (317)
T ss_dssp HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred HHHHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHH
Confidence 1222234679999999999999999999999999999999888 889999999877542 23446689999
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHh--hhhccCcCcccc
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV--INSLLDLRPEKW 219 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~--~~~l~el~~~l~ 219 (232)
.+..+++++|++++++++|||+.+|+.+|+.+|+.+++ +. .+.....++.+ ..++.++...+.
T Consensus 250 ~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~---~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 250 TLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KA---KPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CC---CHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999987666 32 33334444444 356777666554
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=184.15 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=92.9
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCC------chHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNS------HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~------~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
......++||+.++|+.|+++|++++|+||+ ........+ .++..+|+.++++++++..||+|++|..+++
T Consensus 95 ~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~ 171 (555)
T 3i28_A 95 AISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIESCQVGMVKPEPQIYKFLLD 171 (555)
T ss_dssp HHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred hHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEeccccCCCCCCHHHHHHHHH
Confidence 3345689999999999999999999999998 333222222 2677899999999999999999999999999
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
++|++|++|++|||+.+|+.+|+++|+.+++++++
T Consensus 172 ~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 172 TLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred HcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999873
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=162.33 Aligned_cols=192 Identities=17% Similarity=0.187 Sum_probs=125.4
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh--hhhcCC-ChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
++|+|+||+||||+++.. +..+.+.++........ +...+. ............. ....... ..
T Consensus 4 ~~k~i~fDlDGTL~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~ 69 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDLPIEK--------VE 69 (211)
T ss_dssp CCEEEEEECCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTCBHHH--------HH
T ss_pred CCcEEEEeCCCCCCCccH-----HHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHh-cCCCHHH--------HH
Confidence 579999999999999853 23344555542211111 111121 1111111111111 0011111 11
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc----------cCCCCCCHHHH
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIF 154 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~----------~~~~kp~~~~~ 154 (232)
+.+....+.|++.++++.+++.|++++++|++....+...+ +.+++..+|+..+...+ ...+++++..+
T Consensus 70 ~~~~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l 148 (211)
T 1l7m_A 70 KAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEIL 148 (211)
T ss_dssp HHHHTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHH
T ss_pred HHHHhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHH
Confidence 12234567899999999999999999999999888777777 77888766654332211 12346678999
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhh--ccCcCccc
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLRPEK 218 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--l~el~~~l 218 (232)
..+++++|++++++++|||+.||+.|++.+|+.+ ++. ..+..+..|++++.+ +.|+...+
T Consensus 149 ~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~-~~~---~~~~~~~~a~~v~~~~~~~~l~~~l 210 (211)
T 1l7m_A 149 EKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI-AFC---AKPILKEKADICIEKRDLREILKYI 210 (211)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE-EES---CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEE-EEC---CCHHHHhhcceeecchhHHHHHHhh
Confidence 9999999999999999999999999999999864 333 234446778999988 88887654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=161.69 Aligned_cols=184 Identities=17% Similarity=0.164 Sum_probs=128.1
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC------CcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW------DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (232)
+|+|+||+||||++ .++..+++++|... ....+....+. ....+.+ .+.+ .+. +.+
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~--~~~----~~~- 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQ----RLRILDE-HGLK--LGD----IQE- 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHH----HHHHHHH-TTCC--HHH----HHH-
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHH----HHHHHHH-CCCC--HHH----HHH-
Confidence 68999999999999 35667777777652 11111111111 1111111 1221 111 111
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccC--C-CCCCHHHHHHHH
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVR--T-GKPSPDIFLEAA 158 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~--~-~kp~~~~~~~~~ 158 (232)
.....+++||+.++++.|++. ++++++||+....+...+ +++|+..+| +.++++++.. . .+|+|..+..++
T Consensus 64 ---~~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l 138 (206)
T 1rku_A 64 ---VIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 138 (206)
T ss_dssp ---HHTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred ---HHHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHH
Confidence 224578899999999999999 999999999999888888 889999999 5666554432 1 248889999999
Q ss_pred HhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccc-hhhhHh-hhhccCcCcccc
Q 026853 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY-TAADEV-INSLLDLRPEKW 219 (232)
Q Consensus 159 ~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~-~~~~~~-~~~l~el~~~l~ 219 (232)
++++..++++++|||+.+|+.+|+.+|+.+++ +. ..... ..++++ ++++.++...+.
T Consensus 139 ~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~---~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA---PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC---CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CC---cHHHHHHHhhhccccchHHHHHHHH
Confidence 99999999999999999999999999998653 32 22232 344554 788888776654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-26 Score=166.18 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=98.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc--cccce--eecccc----cCCCCCCHHHHH-HHHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSV--IVGSDE----VRTGKPSPDIFL-EAAK 159 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~--~~~~~--~~~~~~----~~~~kp~~~~~~-~~~~ 159 (232)
...+.|++.++++.|++.|++++++|++....+...+ +.+++. .+|.. ++..+. ....+|++..+. .+.+
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (219)
T 3kd3_A 80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK 158 (219)
T ss_dssp TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence 3458899999999999999999999999999988888 888884 34543 222222 245677665444 4456
Q ss_pred hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC--CCCccccchhhhHhhhhccCcCccc
Q 026853 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 160 ~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~--~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
.+|++++++++|||+.||+.|+ ++|+.++++.. ++..+..+..|+++++++.|+.+++
T Consensus 159 ~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 159 AKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 6799999999999999999998 58998766665 3444444778999999999987765
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=154.27 Aligned_cols=180 Identities=16% Similarity=0.074 Sum_probs=119.7
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh---------hhhcCC-ChHHHHHHHHHHcCCCccHHhHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK---------HKIVGK-TPLEEAAIIVEDYGLPCAKHEFV 76 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 76 (232)
+++++|+||+||||++++... .+...+...+.......+ ....+. ............+. ....+++.
T Consensus 2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA-AHSPVELA 78 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH-TSCHHHHH
T ss_pred CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc-CCCHHHHH
Confidence 357899999999999986543 344444444432011111 011121 22222222222221 22344444
Q ss_pred HHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-------c---ccCC
Q 026853 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-------D---EVRT 146 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-------~---~~~~ 146 (232)
......+.+... ..++||+.++|+.|+++|++++|+|++....++..+ +.+|+...+...+.. . ....
T Consensus 79 ~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 79 AWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSF 156 (232)
T ss_dssp HHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSS
T ss_pred HHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCc
Confidence 444444443322 257999999999999999999999999999999888 888987666543321 1 2234
Q ss_pred CCCCHHHHHHHHHhcC---CCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 147 GKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~---~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
+++++..++.+++++| +++++|++||||.+|+.+++.+|+.++..
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 5667788999999999 99999999999999999999999886553
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-25 Score=159.80 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=111.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccccceee-cc-----------
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS----------- 141 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~~~~~~-~~----------- 141 (232)
...++||+.++|++|+++|++++++||+.. ..+...+ +.+|+. |+.++ +.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeecc
Confidence 357899999999999999999999999987 6677777 777874 55543 32
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEE-EEeCCCCCccc-cchhhhHhhhhccCcCcccc
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTH-RYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~~~~~~~~l~el~~~l~ 219 (232)
+....+||++.+++.+++++++++++++||||+.+|+.+|+++|+.+ ++|.+|..... ....++++++++.|+.+.+.
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~ 210 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIE 210 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999 99998765443 34578999999999988876
Q ss_pred CCCC
Q 026853 220 GLPP 223 (232)
Q Consensus 220 ~~~~ 223 (232)
.+..
T Consensus 211 ~~~~ 214 (218)
T 2o2x_A 211 TLGR 214 (218)
T ss_dssp HTCC
T ss_pred HHhc
Confidence 5433
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-25 Score=164.56 Aligned_cols=192 Identities=15% Similarity=0.121 Sum_probs=127.7
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hhh-cC-CChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
++++|+||+||||++++... .+++.++. .....+ ... .+ .+....+..++..+.. . ....+.+++
T Consensus 5 ~~k~viFD~DGTL~d~ds~~-----~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~---~~~~~~~~~- 72 (236)
T 2fea_A 5 RKPFIICDFDGTITMNDNII-----NIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPS--S---LKEEITSFV- 72 (236)
T ss_dssp CCEEEEECCTTTTBSSCHHH-----HHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBG--G---GHHHHHHHH-
T ss_pred CCcEEEEeCCCCCCccchHH-----HHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCC--C---hHHHHHHHH-
Confidence 57899999999999653221 11222221 111111 111 12 2344444444433211 1 112222221
Q ss_pred hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCC--------CCCCHHH-HH
Q 026853 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-FL 155 (232)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------~kp~~~~-~~ 155 (232)
....+++||+.++|+.|+++|++++|+||+....+...+ + ++..+ +.+++++.... .||+|.. +.
T Consensus 73 --~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~ 146 (236)
T 2fea_A 73 --LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSN 146 (236)
T ss_dssp --HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCS
T ss_pred --hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCcccccc
Confidence 234689999999999999999999999999998888887 5 77665 88888776543 7888884 54
Q ss_pred -------HHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccc-h-hhhHhhhhccCcCccccC
Q 026853 156 -------EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY-T-AADEVINSLLDLRPEKWG 220 (232)
Q Consensus 156 -------~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~-~-~~~~~~~~l~el~~~l~~ 220 (232)
.++++++++++++++|||+.+|+.+|+.+|+.++. .+. ..... . .++++++++.|+...+..
T Consensus 147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el~~~l~~ 217 (236)
T 2fea_A 147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEIRKEIEN 217 (236)
T ss_dssp CCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHHHHHHHH
Confidence 88899999999999999999999999999998763 211 11111 2 277888999998877654
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-26 Score=161.83 Aligned_cols=174 Identities=12% Similarity=0.184 Sum_probs=124.6
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCC-CCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh-
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (232)
.++|+||+||||+|+...+..++..+++ |.+ .+.+.+.... .... +... . .+....+.+.+.+.
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~---~~~~----~~~~-~----~~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL---AREQ----YRAL-R----PDLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC---HHHH----HHHH-C----TTHHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh---HHHH----HHHH-h----HHHHHHHHHHHHhcC
Confidence 4789999999999999888888887776 554 3334332221 1222 2222 1 12233444444443
Q ss_pred -hccCCCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
.....++||+.++|+.|++. |++++++||+....+...+ +.+|+ |+.+++++ +++++|++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~~--------------~~~~~~~~ 129 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGPQ--------------FVERIILT 129 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCHH--------------HHTTEEEC
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCHH--------------HHHHcCCC
Confidence 24568999999999999999 9999999999888877777 77787 77776542 78899999
Q ss_pred CCcEEEEeCchhh----hhhhh-hcCCEEEEeCCCCCccccchhhhHhhhhccCc
Q 026853 165 PSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (232)
Q Consensus 165 ~~~~~~vgD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el 214 (232)
|+++++|||+.+| +.+|+ ++|+.++++..++............++++++.
T Consensus 130 ~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~ 184 (193)
T 2i7d_A 130 RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDN 184 (193)
T ss_dssp SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSC
T ss_pred cccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHH
Confidence 9999999999988 99999 99999999988544332212222357787433
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-25 Score=173.39 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=129.7
Q ss_pred cccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh--hhcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHH
Q 026853 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (232)
..++|+|+||+||||++++.. ..+.+.++.......+. ...+ ......+......+. ..... .
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~-~------- 247 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI-----EMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA-GLPAT-V------- 247 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTT-TCBTH-H-------
T ss_pred ccCCcEEEEcCcccCcCCchH-----HHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhc-CCCHH-H-------
Confidence 457899999999999998532 33444444322111111 1111 122233333322221 11111 1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceee-------cc---cccCCCCCCHH
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GS---DEVRTGKPSPD 152 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~-------~~---~~~~~~kp~~~ 152 (232)
+.......+++||+.++++.|++.|++++++||+....+...+ +.+|+..+|+..+ ++ .....+||++.
T Consensus 248 ~~~~~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~ 326 (415)
T 3p96_A 248 IDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKAT 326 (415)
T ss_dssp HHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred HHHHHHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHH
Confidence 1112234589999999999999999999999999999999888 8899988776432 21 24455899999
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh--hccCcCc
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRP 216 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~l~el~~ 216 (232)
.++.+++++|++++++++|||+.||+.+++.+|+.+++ + ..+..+..+++++. ++.+++.
T Consensus 327 ~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~---~~~~~~~~ad~~i~~~~l~~ll~ 388 (415)
T 3p96_A 327 ALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-N---AKPALREVADASLSHPYLDTVLF 388 (415)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S---CCHHHHHHCSEEECSSCTTHHHH
T ss_pred HHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-C---CCHHHHHhCCEEEccCCHHHHHH
Confidence 99999999999999999999999999999999988776 3 24555666776643 4444433
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-25 Score=159.89 Aligned_cols=181 Identities=14% Similarity=0.190 Sum_probs=129.8
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh-
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (232)
+.++|+||+||||+|+...+..++.++++++. ..+.+.+ .+......+.. .. .. ....+.+.+.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~----~~----~~-~~~~~~~~~~~~~ 69 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALEDR---RGFWVSEQYGR----LR----PG-LSEKAISIWESKN 69 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGGC---CSSCHHHHHHH----HS----TT-HHHHHHHHHTSTT
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHHh---cCCcHHHHHHh----cC----HH-HHHHHHHHHHhhh
Confidence 46899999999999999988889988887762 2333332 23333222222 21 11 112233333332
Q ss_pred -hccCCCCCcHHHHHHHHHhC-CCCEEEEeCCchHHHHHHHhhhcCCcc-ccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 87 -~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
.....++||+.++|+.|++. |++++|+||+....+...+ +++++.. +|+ ..+++++++
T Consensus 70 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~ 130 (197)
T 1q92_A 70 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVL 130 (197)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEE
T ss_pred hhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhcc
Confidence 23578999999999999999 9999999999888777777 7778877 775 557788999
Q ss_pred CCCcEEEEeCchhh----hhhhh-hcCCEEEEeCCCCCccccchhhhHhhhhc-cCcCccccC
Q 026853 164 EPSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSL-LDLRPEKWG 220 (232)
Q Consensus 164 ~~~~~~~vgD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~~l-~el~~~l~~ 220 (232)
+|+++++|||+..| +.+|+ ++|+.++++.+++...........+++++ +++...+.+
T Consensus 131 ~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~ 193 (197)
T 1q92_A 131 TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS 193 (197)
T ss_dssp CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred CCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhcc
Confidence 99999999999988 99999 99999999998655432222233468888 466665553
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-24 Score=145.02 Aligned_cols=101 Identities=20% Similarity=0.216 Sum_probs=94.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEE
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 171 (232)
++|++.++|+.|++.|++++++||++...+...+ +.+++..+|+.++++++....||++..++.++++++++|+++++|
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 97 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLV 97 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 3467788999999999999999999988888788 788999999999999998999999999999999999999999999
Q ss_pred eCchhhhhhhhhcCCEEEEeCC
Q 026853 172 EDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 172 gD~~~Di~~a~~~G~~~i~v~~ 193 (232)
||+.+|+.+|+++|+.++++.+
T Consensus 98 gD~~~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 98 DDSILNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp ESCHHHHHHHHHHTCEEEECSC
T ss_pred cCCHHHHHHHHHCCCEEEEeCC
Confidence 9999999999999999999987
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=150.40 Aligned_cols=104 Identities=15% Similarity=0.121 Sum_probs=92.7
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCc-hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
....++|++.++|+.|++.|++++++||+. ...+...+ +.+++..+|+.++.. .+|++..+..+++++|++|+
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~ 138 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFS 138 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChH
Confidence 346789999999999999999999999998 68888888 889999999987433 25788999999999999999
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCCCCCc
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
++++|||+.+|+.+|+++|+.++++.+|...
T Consensus 139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred HEEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999999999999986543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-25 Score=166.45 Aligned_cols=125 Identities=16% Similarity=0.152 Sum_probs=98.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHH---HHhhhcCCccccceeecccc-cCCCCCCHHHHHHHHHhcCCCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~~l~~~~~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
.+++++.+.++.+ ..|+++ ++||........ .+ +..++..+|+.+++.+. ...+||++.+++.+++++|++++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVP-DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEE-CHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccc-cccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 4567888889998 678887 888876443211 12 33345567777777777 88999999999999999999999
Q ss_pred cEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc-c---hhhhHhhhhccCcCccc
Q 026853 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLRPEK 218 (232)
Q Consensus 167 ~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~---~~~~~~~~~l~el~~~l 218 (232)
++++|||+. ||+.||+.+|+.+++|.+|...... . ..|+++++++.|+.+.+
T Consensus 214 e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp GEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 999999995 9999999999999999997654332 2 26889999999887654
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-24 Score=167.04 Aligned_cols=200 Identities=16% Similarity=0.157 Sum_probs=143.9
Q ss_pred CCcccccHHHHHHHHHHHHH-HcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHH--HHHHHHHhh---hccC
Q 026853 17 DGTLLNTDGMFSEVLKTFLV-KYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN--EVYSMFSDH---LCKV 90 (232)
Q Consensus 17 DGTL~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~ 90 (232)
|||...... +...+.++.+ ..++. .+......|.+.......+.+.++......+... .+....... ....
T Consensus 138 D~t~~~~d~-i~~~l~~~a~~~~~i~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (384)
T 1qyi_A 138 DNVKVGKNN-IYAALEEFATTELHVS--DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIIL 214 (384)
T ss_dssp TTCCSSHHH-HHHHHHHHHHHHTTCS--CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBS
T ss_pred cCCCccHHH-HHHHHHHHHHHhCCCC--HHHHHHhcCCCHHHHHHHHHHHcCCccCHHHHHhHHHHHHHHHHHHhhccCC
Confidence 788764433 4455566555 34653 3444566666666666666554422100000000 000000100 1245
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc--eeecccccC-----------CCCCCHHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPDIFLEA 157 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~-----------~~kp~~~~~~~~ 157 (232)
.++||+.++|+.|+++|++++|+||++...+...+ +++|+..+|+ .++++++.. .+||+|..|..+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a 293 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 78899999999999999999999999999998888 8889999999 788877654 489999999999
Q ss_pred HHhcC--------------CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc----ccc-chhhhHhhhhccCcCccc
Q 026853 158 AKRLN--------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----THR-YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 158 ~~~~~--------------~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~----~~~-~~~~~~~~~~l~el~~~l 218 (232)
+++++ ++|++|++|||+.+|+.+|+++|+.+++|.+|... ... ...|+++++++.|+...+
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l 373 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHHH
Confidence 99999 89999999999999999999999999999986542 111 246899999999998877
Q ss_pred cC
Q 026853 219 WG 220 (232)
Q Consensus 219 ~~ 220 (232)
.+
T Consensus 374 ~~ 375 (384)
T 1qyi_A 374 DN 375 (384)
T ss_dssp SC
T ss_pred HH
Confidence 64
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=151.04 Aligned_cols=190 Identities=21% Similarity=0.123 Sum_probs=119.9
Q ss_pred ccccEEE-EeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhh-hcCC-ChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~-fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
.++|.++ ||+||||+++. .+..+.+.++.......... ..+. ............+. ... .+.+
T Consensus 6 ~~mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~ 71 (201)
T 4ap9_A 6 QFMKKVAVIDIEGTLTDFE-----FWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLIR-GID--------EGTF 71 (201)
T ss_dssp GGGSCEEEEECBTTTBCCC-----HHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHTT-TCB--------HHHH
T ss_pred HhcceeEEecccCCCcchH-----HHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCC--------HHHH
Confidence 3456566 99999999887 44555566665100000000 0111 11111111111111 000 1122
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccccc-CCCCCCHHHHHHHHHhcC
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~kp~~~~~~~~~~~~~ 162 (232)
........+.|++.++++.|++.|++++++|++....+... +.+|+..+++.+...+.. ...+|.+.....+++++
T Consensus 72 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l- 148 (201)
T 4ap9_A 72 LRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF--KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF- 148 (201)
T ss_dssp HHGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG--TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG-
T ss_pred HHHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc-
Confidence 33345678999999999999999999999999987765533 667877765554433321 11445555566777777
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~~ 221 (232)
+++++++|||+.||+.|++.+|+. +++..+.. .|+++++++.|+.+.+..+
T Consensus 149 -~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 149 -RDGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp -TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHHHHHHHTC
T ss_pred -CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHHHHHHHHh
Confidence 899999999999999999999997 44444222 7899999999988777643
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-25 Score=163.75 Aligned_cols=208 Identities=15% Similarity=0.139 Sum_probs=121.6
Q ss_pred cccccEEEEeCCCcccccH-------HHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhH---
Q 026853 6 KKLMSCVILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF--- 75 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (232)
++++|+|+||+||||+++. .....+ ...+++.|+... ......++........+ ...+.......+
T Consensus 9 m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~G~~~~--~~t~~~gr~~~~~~~~l-~~~g~~~~~~~~~~~ 84 (271)
T 2x4d_A 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRSRLKVR--FCTNESAASRAELVGQL-QRLGFDISEQEVTAP 84 (271)
T ss_dssp TTTCCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHSSSEEE--EECCCCSSCHHHHHHHH-HHTTCCCCGGGEECH
T ss_pred HhcCCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHCCCcEE--EEECCCCCCHHHHHHHH-HHCCCCCCHHHeecH
Confidence 3468999999999999952 111222 345667776543 22233455554444443 455654322111
Q ss_pred HHHHHHHHHhh--hccCCCCC-----------------------------cHHHHHHHHHhC-CCCEEEEeCCchHHHHH
Q 026853 76 VNEVYSMFSDH--LCKVKALP-----------------------------GANRLIKHLSCH-GVPMALASNSHRATIES 123 (232)
Q Consensus 76 ~~~~~~~~~~~--~~~~~~~~-----------------------------~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~ 123 (232)
........... .......+ ++.+.++.+++. |+++ ++++........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~ 163 (271)
T 2x4d_A 85 APAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVL-ISLGKGRYYAAT 163 (271)
T ss_dssp HHHHHHHHHHHTCCEEEECCGGGGGGGTTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCE-EEECCCSEEEET
T ss_pred HHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeE-EEEcCCcccccC
Confidence 11111111111 00112233 444455555554 5554 444332221111
Q ss_pred HHhhhcCCccccc---eeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccc
Q 026853 124 KISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 124 ~l~~~~~l~~~~~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
.+ ...++..+++ ...+.+....+||++.+++.+++++|++++++++|||+. ||+.|++.+|+.+++|.+|.....
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~ 242 (271)
T 2x4d_A 164 SG-LMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS 242 (271)
T ss_dssp TE-EEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGG
T ss_pred CC-cccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCch
Confidence 11 1122222222 223345566799999999999999999999999999999 999999999999999999743222
Q ss_pred -c---chhhhHhhhhccCcCcccc
Q 026853 200 -R---YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 200 -~---~~~~~~~~~~l~el~~~l~ 219 (232)
. ...|+++++++.|+...+.
T Consensus 243 ~~~~~~~~~~~~~~~~~el~~~l~ 266 (271)
T 2x4d_A 243 DEHHPEVKADGYVDNLAEAVDLLL 266 (271)
T ss_dssp GGGCSSCCCSEEESSHHHHHHHHH
T ss_pred hhcccCCCCCEEeCCHHHHHHHHH
Confidence 1 2458999999999877654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-24 Score=162.61 Aligned_cols=193 Identities=18% Similarity=0.176 Sum_probs=130.7
Q ss_pred cccccEEEEeCCCcccc----------------------------cHHHHHHHHHHHHHHcCCCCCc-chhhhhcCCChH
Q 026853 6 KKLMSCVILDLDGTLLN----------------------------TDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPL 56 (232)
Q Consensus 6 ~~~~k~i~fDlDGTL~~----------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 56 (232)
+.++|+|+||+||||++ +.+.+..++...+++++..... ..+....+....
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~ 89 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE 89 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence 35789999999999999 8777888888888888765422 222222222111
Q ss_pred HH---------HHHHHHHcCCCccHHhHHHHHHHHHHhhhc----------------cCCCCCcHHHHHHHHHhCCCCEE
Q 026853 57 EE---------AAIIVEDYGLPCAKHEFVNEVYSMFSDHLC----------------KVKALPGANRLIKHLSCHGVPMA 111 (232)
Q Consensus 57 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~l~~~g~~~~ 111 (232)
.. ...++...+.... .....+ ...... ...++|++.++|+.|++.|++++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~ 164 (280)
T 3skx_A 90 GIVNGRRYMVVSPGYIRELGIKTD--ESVEKL---KQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCM 164 (280)
T ss_dssp EEETTEEEEEECHHHHHHTTCCCC--TTHHHH---HTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEE
T ss_pred EEECCEEEEEecHHHHHHcCCCch--HHHHHH---HhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEE
Confidence 00 0123334443322 111111 111110 01688999999999999999999
Q ss_pred EEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEe
Q 026853 112 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 112 i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
++|+.....+...+ +.+|+..+|+.+++.+. ....+...+.+ ++++|||+.||+.|++.+| +.|
T Consensus 165 i~T~~~~~~~~~~~-~~~gl~~~f~~~~~~~k-------~~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag---~~v 228 (280)
T 3skx_A 165 MLTGDNRFVAKWVA-EELGLDDYFAEVLPHEK-------AEKVKEVQQKY-----VTAMVGDGVNDAPALAQAD---VGI 228 (280)
T ss_dssp EECSSCHHHHHHHH-HHHTCSEEECSCCGGGH-------HHHHHHHHTTS-----CEEEEECTTTTHHHHHHSS---EEE
T ss_pred EEeCCCHHHHHHHH-HHcCChhHhHhcCHHHH-------HHHHHHHHhcC-----CEEEEeCCchhHHHHHhCC---ceE
Confidence 99999999999888 88999999988776543 23344444433 7899999999999999999 456
Q ss_pred CCCCCccccchhhhHhh--hhccCcCcccc
Q 026853 192 PSLPKQTHRYTAADEVI--NSLLDLRPEKW 219 (232)
Q Consensus 192 ~~~~~~~~~~~~~~~~~--~~l~el~~~l~ 219 (232)
.+++.....+..+++++ +++.++...+.
T Consensus 229 a~~~~~~~~~~~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 229 AIGAGTDVAVETADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp ECSCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred EecCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 66665666666677666 88888876654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-24 Score=147.79 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=89.3
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeC
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD 173 (232)
++..++|+.|++.|++++++||++...+...+ +++|+..+|+. .||++..++.++++++++++++++|||
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vGD 108 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIGD 108 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEECC
Confidence 45579999999999999999999999898888 88898776653 799999999999999999999999999
Q ss_pred chhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 174 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 174 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+.+|+.+|+.+|+.+++.+. .+.....+++++.++.+
T Consensus 109 ~~~Di~~a~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 109 DVVDIEVMKKVGFPVAVRNA---VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp SGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECSSCSS
T ss_pred CHHHHHHHHHCCCeEEecCc---cHHHHhhCCEEecCCCC
Confidence 99999999999998664422 34445678888888765
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-24 Score=164.70 Aligned_cols=127 Identities=17% Similarity=0.257 Sum_probs=104.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHH--H-HHHhhhcC-CccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~--~-~~l~~~~~-l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
.+++++.++++.|++.|+ ++++||...... . ..+ ...| +..+|+.+++++....+||+|.+|+.+++++|++|+
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 456889999999999888 999999876543 1 223 3444 667788888888888999999999999999999999
Q ss_pred cEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----------chhhhHhhhhccCcCcccc
Q 026853 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 167 ~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----------~~~~~~~~~~l~el~~~l~ 219 (232)
++++|||+. ||+.+|+.+|+.+++|.+|...... ...|+++++++.|+...+.
T Consensus 234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999997 9999999999999999997654322 2468999999999987765
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-23 Score=159.95 Aligned_cols=116 Identities=20% Similarity=0.221 Sum_probs=96.3
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeec----------ccccCCCCCCHHHHHHH
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~----------~~~~~~~kp~~~~~~~~ 157 (232)
...+++||+.++++.|++.|++++++||+....+...+ +.+|+..+|+..+. .++....||++..++.+
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 34689999999999999999999999999999888888 88999887765431 23556679999999999
Q ss_pred HHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
++++|++++++++|||+.||+.|++.+|+.+++ +. .+..+..+++++
T Consensus 254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~---~~~~~~~a~~v~ 300 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HA---KPKVEAKAQTAV 300 (335)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHTTSSEEE
T ss_pred HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEE
Confidence 999999999999999999999999999987766 32 344455555544
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-24 Score=160.78 Aligned_cols=120 Identities=18% Similarity=0.268 Sum_probs=99.0
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHH--HH-HHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhc----CCCCCc
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPSS 167 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~--~~-~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~----~~~~~~ 167 (232)
....+++.|++.|++ +++||...... .. .+....++..+|+.+++++....+||+|.+|+.+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 556677789899999 99999976654 21 11144577888999999888889999999999999999 999999
Q ss_pred EEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc-c-------hhhhHhhhhccCcC
Q 026853 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y-------TAADEVINSLLDLR 215 (232)
Q Consensus 168 ~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~-------~~~~~~~~~l~el~ 215 (232)
++||||+. +|+.+|+++|+.+++|.+|...... . ..|+++++++.||+
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~ell 284 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIEL 284 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhhC
Confidence 99999996 9999999999999999997654333 2 46889999988874
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-23 Score=156.54 Aligned_cols=195 Identities=17% Similarity=0.207 Sum_probs=133.5
Q ss_pred cccEEEEeCCCcccccHHHHH----------------------------HHHHHHHHHcCCCC-CcchhhhhcCCChHH-
Q 026853 8 LMSCVILDLDGTLLNTDGMFS----------------------------EVLKTFLVKYGKEW-DGREKHKIVGKTPLE- 57 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~----------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 57 (232)
++++|+||+||||+++...+. .++..+++++++.. +.+.+....|.+...
T Consensus 31 ~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 110 (287)
T 3a1c_A 31 KVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD 110 (287)
T ss_dssp HCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEET
T ss_pred cCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEEE
Confidence 579999999999999866553 77788888888753 333343333332111
Q ss_pred -H---HHHHHHHcCCCccHHhHHHHHHHHHHh------------h-----hccCCCCCcHHHHHHHHHhCCCCEEEEeCC
Q 026853 58 -E---AAIIVEDYGLPCAKHEFVNEVYSMFSD------------H-----LCKVKALPGANRLIKHLSCHGVPMALASNS 116 (232)
Q Consensus 58 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~ 116 (232)
. ...+....+...+ ... ..+.+.+.+ . ....+++||+.++|+.|++.|++++++||+
T Consensus 111 ~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 111 GILVGNKRLMEDFGVAVS-NEV-ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp TEEEECHHHHHHTTCCCC-HHH-HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEECCHHHHHhcCCCcc-HHH-HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 0 0011222222211 111 122222221 0 124578999999999999999999999999
Q ss_pred chHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCC
Q 026853 117 HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (232)
Q Consensus 117 ~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~ 196 (232)
....+...+ +.+|+..+|+.++ |. ....++++++.. ++|++|||+.||+.+++.+|+. +.+.. .
T Consensus 189 ~~~~~~~~l-~~~gl~~~f~~i~---------~~--~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~--~ 252 (287)
T 3a1c_A 189 NWRSAEAIS-RELNLDLVIAEVL---------PH--QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGS--G 252 (287)
T ss_dssp CHHHHHHHH-HHHTCSEEECSCC---------TT--CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEECC--C
T ss_pred CHHHHHHHH-HHhCCceeeeecC---------hH--HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeCC--C
Confidence 999888888 8889988887654 11 126788889988 9999999999999999999987 44433 2
Q ss_pred ccccchhhhHhh--hhccCcCccccC
Q 026853 197 QTHRYTAADEVI--NSLLDLRPEKWG 220 (232)
Q Consensus 197 ~~~~~~~~~~~~--~~l~el~~~l~~ 220 (232)
.......+++++ +++.++...+..
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l~~~l~~ 278 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDVVAAIQL 278 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHHHHHHHT
T ss_pred CHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 333456789999 889988877654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.3e-23 Score=142.72 Aligned_cols=108 Identities=10% Similarity=0.047 Sum_probs=90.3
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
+++.|++.|++++++||.....+...+ +++|+..+|+. .||++..++.++++++++++++++|||+.||+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 108 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA 108 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 799999999999999999999999888 88898777665 39999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhh------ccCcCcccc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS------LLDLRPEKW 219 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------l~el~~~l~ 219 (232)
.+++.+|+.++.. +..+..+..|++++.+ +.++.+.++
T Consensus 109 ~~~~~ag~~~~~~---~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 109 KLLKRVGIAGVPA---SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHHTTSSEEECCT---TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHHHCCCeEEcC---ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 9999999765543 3345556678888877 555555554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-24 Score=159.12 Aligned_cols=125 Identities=13% Similarity=0.119 Sum_probs=102.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHH--HHHHhhh-cCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~--~~~l~~~-~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
..++|++.++++.|+ .|+++ ++||...... ...+ .. .++..+|+.+++++....+||+|.+|+.++++ ++|+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcc
Confidence 456889999999999 78888 9999876543 2223 33 45667888888888888999999999999999 9999
Q ss_pred cEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc-c---hhhhHhhhhccCcCcccc
Q 026853 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLRPEKW 219 (232)
Q Consensus 167 ~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~---~~~~~~~~~l~el~~~l~ 219 (232)
+++||||+. +|+.+|+++|+.+++|.+|...... . ..++++++++.|+.+.+.
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 999999996 9999999999999999987654332 2 268999999999988764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=151.18 Aligned_cols=87 Identities=25% Similarity=0.340 Sum_probs=70.7
Q ss_pred cccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc-hhhhhhhhhcCCEEEEeCCCCCcccc-ch---hhhHh
Q 026853 133 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-YT---AADEV 207 (232)
Q Consensus 133 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~~---~~~~~ 207 (232)
..|+.++..+....+||++.+++.+++++|++++++++|||+ .||+.|++.+|+.++++++|....+. +. .|+++
T Consensus 168 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v 247 (266)
T 3pdw_A 168 SVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHA 247 (266)
T ss_dssp HHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEE
T ss_pred HHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence 345555666777889999999999999999999999999999 69999999999999999997655444 33 59999
Q ss_pred hhhccCcCcccc
Q 026853 208 INSLLDLRPEKW 219 (232)
Q Consensus 208 ~~~l~el~~~l~ 219 (232)
++++.||.+-+.
T Consensus 248 ~~~~~el~~~~~ 259 (266)
T 3pdw_A 248 IDSLTEWIPYIE 259 (266)
T ss_dssp ESSGGGGHHHHH
T ss_pred eCCHHHHHHHhh
Confidence 999999876543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-24 Score=152.14 Aligned_cols=107 Identities=12% Similarity=0.069 Sum_probs=89.7
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
+|+.|++.|++++++|+.....+...+ +.+|+. +|.. .||++..++.++++++++++++++|||+.||+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-~~~~---------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~ 115 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-VLHG---------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL 115 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-EEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-eEeC---------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 899999999999999999999999888 888986 3322 28999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhh------ccCcCcccc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS------LLDLRPEKW 219 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------l~el~~~l~ 219 (232)
.+++.+|+.+ ..++..+..+..+++++.+ +.++.+.++
T Consensus 116 ~~~~~ag~~v---~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 116 PCFALVGWPV---AVASAHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHHSSEEE---ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHCCCeE---ECCChhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999553 3334455567788888888 777766665
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=146.08 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=80.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-c--ccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-D--EVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-~--~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.+.+++.++|+.|+++|++++++||+........+ +. +..+|+.++.+ + .....||+|..+..+++++|+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence 35779999999999999999999999766554444 33 44566665322 1 345689999999999999998
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCCCCC
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~~~~ 196 (232)
+++|||+.+|+.+|+++|+.++++.++..
T Consensus 161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 161 RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999998654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.4e-23 Score=152.56 Aligned_cols=83 Identities=18% Similarity=0.227 Sum_probs=71.8
Q ss_pred ccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc-hhhhhhhhhcCCEEEEeCCCCCccccch----hhhHhh
Q 026853 134 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT----AADEVI 208 (232)
Q Consensus 134 ~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~~----~~~~~~ 208 (232)
+|+.++..+....+||++.+++.+++++|++++++++|||+ .||+.||+.+|+.+++|.+|....+... .|++++
T Consensus 168 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~ 247 (264)
T 3epr_A 168 LLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVL 247 (264)
T ss_dssp HHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEE
T ss_pred HHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEE
Confidence 45555666777889999999999999999999999999999 5999999999999999999866555422 799999
Q ss_pred hhccCcCc
Q 026853 209 NSLLDLRP 216 (232)
Q Consensus 209 ~~l~el~~ 216 (232)
+++.||.+
T Consensus 248 ~~l~~l~~ 255 (264)
T 3epr_A 248 ASLDEWTF 255 (264)
T ss_dssp SCGGGCCS
T ss_pred CCHHHHhc
Confidence 99999865
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-23 Score=146.45 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=89.3
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
+|+.|++.|++++++|+.....+...+ +++|+..+|+.+ +++|..++.+++++|++++++++|||+.||+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 899999999999999999999999888 889998877754 6778999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhh------ccCcCcccc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS------LLDLRPEKW 219 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------l~el~~~l~ 219 (232)
.+++.+|+.++ .++..+..+..+++++.+ +.++.+.+.
T Consensus 124 ~~~~~ag~~~~---~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 124 PVIRRVGLGMA---VANAASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp HHHHHSSEEEE---CTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHCCCeEE---eCCccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 99999996543 333445556677887776 455554443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-22 Score=144.31 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=86.4
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
+|+.|++.|++++|+|+.....+...+ +.+|+..+|+.+ +|++..++.+++++|++++++++|||+.||+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 899999999999999999999999888 889998777653 8889999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhhc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
.+++.+|+.++. ++..+..+..|++++.+.
T Consensus 154 ~~~~~ag~~~a~---~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 154 PVMAQVGLSVAV---ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HHHTTSSEEEEC---TTSCTTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEe---CCccHHHHhhCCEEEeCC
Confidence 999999966443 334555677788888765
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-22 Score=141.22 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=87.2
Q ss_pred HHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch
Q 026853 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175 (232)
Q Consensus 96 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~ 175 (232)
..++|+.|+++|++++++|+.....+...+ +.+++..+|+. .||++..++.++++++++++++++|||+.
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~ 109 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIGDDS 109 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 347999999999999999999999888888 88898776542 58999999999999999999999999999
Q ss_pred hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 176 ~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
||+.+++.+|+.+++. +..+..+..+++++.+..
T Consensus 110 ~Di~~~~~ag~~~~~~---~~~~~~~~~ad~v~~~~~ 143 (180)
T 1k1e_A 110 VDLPAFAACGTSFAVA---DAPIYVKNAVDHVLSTHG 143 (180)
T ss_dssp GGHHHHHHSSEEEECT---TSCHHHHTTSSEECSSCT
T ss_pred HHHHHHHHcCCeEEeC---CccHHHHhhCCEEecCCC
Confidence 9999999999876643 334444566777777653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-22 Score=149.53 Aligned_cols=79 Identities=33% Similarity=0.382 Sum_probs=69.2
Q ss_pred ccc-cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccch--------hhhHhhhh
Q 026853 141 SDE-VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINS 210 (232)
Q Consensus 141 ~~~-~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~--------~~~~~~~~ 210 (232)
.+. ...+||++.+++.+++++|++++++++|||+. ||+.||+.+|+.+++|.+|+...+... .|++++++
T Consensus 179 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~ 258 (268)
T 3qgm_A 179 REPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNS 258 (268)
T ss_dssp CCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESS
T ss_pred CCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECC
Confidence 344 67899999999999999999999999999995 999999999999999999877665544 78999999
Q ss_pred ccCcCcccc
Q 026853 211 LLDLRPEKW 219 (232)
Q Consensus 211 l~el~~~l~ 219 (232)
+.||.+++.
T Consensus 259 ~~el~~~l~ 267 (268)
T 3qgm_A 259 LKDMVEALE 267 (268)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHh
Confidence 999987764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-22 Score=150.14 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=94.8
Q ss_pred CCCCcHHHHHHHHHhC-CCCEEEEeCC---------------------chHHHHHHHhhhcCCcccccee----------
Q 026853 91 KALPGANRLIKHLSCH-GVPMALASNS---------------------HRATIESKISYQHGWNESFSVI---------- 138 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~-g~~~~i~s~~---------------------~~~~~~~~l~~~~~l~~~~~~~---------- 138 (232)
...+++.++++.+++. |+.+++.|+. ....+...+ +..|+..+|...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKIC-EEYGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHH-HHHTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHH-HHcCCCEEEEEccccccCCCCc
Confidence 5678999999999987 9999999876 445566666 777877666554
Q ss_pred ecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 139 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
...+.....++++.++..+++++|++++++++|||+.||+.|++.+|+ .+..++..+..+..|++++.+..+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~---~~~~~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGN---GYLLKNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSE---EEECTTCCHHHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCc---EEEECCccHHHHHhCCEEcCCCCc
Confidence 455667788999999999999999999999999999999999999994 444455566667778887776544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-22 Score=143.44 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=85.0
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.|+.|++.|++++|+||.....+...+ +.+|+..+|+. .||++..++.++++++++++++++|||+.||+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 488999999999999999999999888 88998776653 38999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhhc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
.+++.+|+.+ ..++..+..+..|++++.+.
T Consensus 130 ~~~~~ag~~v---a~~na~~~~~~~ad~v~~~~ 159 (195)
T 3n07_A 130 PVMEKVALRV---CVADGHPLLAQRANYVTHIK 159 (195)
T ss_dssp HHHTTSSEEE---ECTTSCHHHHHHCSEECSSC
T ss_pred HHHHHCCCEE---EECChHHHHHHhCCEEEcCC
Confidence 9999999553 34445556677788777663
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-22 Score=150.56 Aligned_cols=69 Identities=19% Similarity=0.082 Sum_probs=61.3
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+....+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..+..+..|++++.+..|
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCGGG
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHHhCCEEcCCCCC
Confidence 44567888999999999999999999999999999999999999 7788888888888889998877554
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-23 Score=152.77 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=98.2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
..+++||+.++|+.|++.|++++++||.....+...+ +.+|+..+|+.++ |..+..++++++..++++
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~ 201 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKV 201 (263)
Confidence 4568999999999999999999999999999888888 8899988888765 345677889999999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCcccc
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPEKW 219 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~~l~ 219 (232)
+||||+.||+.+++.+|+. +.+++........+++++ +++.++...+.
T Consensus 202 ~~VGD~~~D~~aa~~Agv~---va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 202 LMIGDGVNDAAALALADVS---VAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 9999999999999999954 444444444466789999 99999987765
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-22 Score=143.78 Aligned_cols=99 Identities=15% Similarity=0.168 Sum_probs=85.4
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.|+.|++.|++++++||.+...+...+ +.+|+..+|+.+ ||++..++.++++++++++++++|||+.||+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 123 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL 123 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 488899999999999999999999888 889988777654 8999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhh
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (232)
.+++.+|+.++ .++..+..+..+++++.+
T Consensus 124 ~~~~~ag~~~~---~~~~~~~~~~~ad~v~~~ 152 (191)
T 3n1u_A 124 PLIQQVGLGVA---VSNAVPQVLEFADWRTER 152 (191)
T ss_dssp HHHHHSSEEEE---CTTCCHHHHHHSSEECSS
T ss_pred HHHHHCCCEEE---eCCccHHHHHhCCEEecC
Confidence 99999997753 333445557778888777
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-22 Score=149.90 Aligned_cols=69 Identities=17% Similarity=0.048 Sum_probs=61.6
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+....+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAG---LGVAMGNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCTTT
T ss_pred EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcC---CEEEecCCcHHHHHhcCEECCCCCc
Confidence 34557788999999999999999999999999999999999999 6777778888889999999988766
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=129.57 Aligned_cols=168 Identities=11% Similarity=0.085 Sum_probs=109.9
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH-hh
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS-DH 86 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (232)
+.++|+||+||||+|+...+..++.+ .+|...+.+.+. +.+.... ++.. .++....+ .. ..
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~~---g~~~~~~-------~~~~--~~~~~~~~---~~~~~ 64 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESLN---GKKLKHM-------IPEH--EGLVMDIL---KEPGF 64 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGCT---TCCC-----------------CHHHHHH---HSTTG
T ss_pred cccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHHc---CccHHHH-------CCch--HHHHHHHH---hCcch
Confidence 35899999999999998887777764 567655544432 3322211 1111 11111111 11 12
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCC---chHH--HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhc
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNS---HRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~--~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 161 (232)
....+++||+.++|+.|++. ++++|+||. .... ....+..+++...+++.+++++.. .+
T Consensus 65 ~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l 128 (180)
T 3bwv_A 65 FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II 128 (180)
T ss_dssp GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB
T ss_pred hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee
Confidence 34678999999999999985 999999998 3212 233453446666777888877651 11
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
+++++|||+.+++. +.+| .++++..++... ..++++++++.|+...+.
T Consensus 129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~l~ 176 (180)
T 3bwv_A 129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNYFN 176 (180)
T ss_dssp ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHHHH
T ss_pred ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHHHH
Confidence 77899999999986 4589 999998754322 457788899888876654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-20 Score=129.88 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=84.9
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
+|+.|++.|++++++||.....+...+ +.+|+..+|+. .||++..++.+++++|++++++++|||+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~~---------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQG---------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEECS---------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeecC---------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 899999999999999999999888888 88888765542 59999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhhc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
.+++.+|+.+++.+ .....+..+++++.+.
T Consensus 131 ~~a~~ag~~~~~~~---~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVAD---AHPLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTT---SCTTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecC---cCHHHHhcCCEEEeCC
Confidence 99999998865433 2344456688888776
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-21 Score=147.40 Aligned_cols=68 Identities=12% Similarity=0.162 Sum_probs=60.3
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+++++.+++.+++++|++++++++|||+.||+.|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASD---VTIAMKNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCS---EEEEETTSCHHHHHHCSEEECCGGG
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcC---ceEEecCccHHHHHhhhheeCCCch
Confidence 4567889999999999999999999999999999999999999 6666777788888889998887654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.5e-21 Score=144.08 Aligned_cols=67 Identities=15% Similarity=0.099 Sum_probs=52.1
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
...+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 192 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 192 MNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAG---LGVAMGNAIDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp EESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHST---EECBC---CCHHHHHCSCBC-----
T ss_pred ecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcC---ceeeccCCCHHHHHhcceeccCCCc
Confidence 345666899999999999999999999999999999999999 7888888888889999999887554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-20 Score=138.61 Aligned_cols=191 Identities=15% Similarity=0.068 Sum_probs=116.6
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHc---CCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHH-HHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE-VYSMF 83 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 83 (232)
|+|+|+||+||||+++...+.....++++++ |+... -..|+... ....+.+..+.+......... +.. -
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~-----i~TGR~~~-~~~~~~~~l~~~~~~i~~nGa~i~~-~ 74 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIM-----LVTGNTVQ-FAEAASILIGTSGPVVAEDGGAISY-K 74 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEE-----EECSSCHH-HHHHHHHHHTCCSCEEEGGGTEEEE-T
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEE-----EEcCCChh-HHHHHHHHcCCCCeEEEeCCcEEEe-C
Confidence 4799999999999998655555555555443 54332 13344433 333445555544210000000 000 0
Q ss_pred HhhhccCCCCCcHHHHHHHHH-hC-CCCE-----------EEEe-CCchHHHHHHHhhhcCCccccceeecc----cccC
Q 026853 84 SDHLCKVKALPGANRLIKHLS-CH-GVPM-----------ALAS-NSHRATIESKISYQHGWNESFSVIVGS----DEVR 145 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~-~~-g~~~-----------~i~s-~~~~~~~~~~l~~~~~l~~~~~~~~~~----~~~~ 145 (232)
.+......+ +.+.++++.++ +. |+.+ ++++ +.........+ +.++ ..++.+ ++ +...
T Consensus 75 ~~~~~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~ 149 (231)
T 1wr8_A 75 KKRIFLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKK 149 (231)
T ss_dssp TEEEESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEEC
T ss_pred CEEEEeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEec
Confidence 011111223 77778887777 44 5543 5555 33555566566 5543 456655 33 3356
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
.++|++.+++.+++++|++++++++|||+.||+.|++.+|+. +.+ ++..+..+..|++++.+..+
T Consensus 150 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~--~~~~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 150 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAV--AQAPKILKENADYVTKKEYG 214 (231)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EEC--TTSCHHHHTTCSEECSSCHH
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEe--cCCCHHHHhhCCEEecCCCc
Confidence 789999999999999999999999999999999999999976 334 34444455677777766544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-20 Score=129.75 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=89.5
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCC---------------chHHHHHHHhhhcCCccccceeecc-----cccCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTGK 148 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~---------------~~~~~~~~l~~~~~l~~~~~~~~~~-----~~~~~~k 148 (232)
...++||+.++|+.|++.|++++|+||+ ....+...+ +.+|+. |+.++.+ ++....|
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCRK 116 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSST
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCcccccccC
Confidence 3578999999999999999999999998 566677777 888886 8888644 7788899
Q ss_pred CCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC
Q 026853 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (232)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~ 195 (232)
|+|.+|+.++++++++|++++||||+.+|+.+|+++|+.++++.++.
T Consensus 117 P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 117 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 99999999999999999999999999999999999999999998853
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=143.23 Aligned_cols=98 Identities=15% Similarity=0.287 Sum_probs=86.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCc---------h---HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSH---------R---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~---------~---~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
++||+.++|+.|++.|++++|+||.. . ..+...+ +.+|+. |+.++++++....||+|.++..+++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~ 164 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 164 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence 78999999999999999999999965 2 2256666 778884 8999999999999999999999999
Q ss_pred hcC----CCCCcEEEEeCch-----------------hhhhhhhhcCCEEEEeC
Q 026853 160 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVVAVP 192 (232)
Q Consensus 160 ~~~----~~~~~~~~vgD~~-----------------~Di~~a~~~G~~~i~v~ 192 (232)
++| +++++++||||+. +|+.+|+++|+.++..-
T Consensus 165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 998 9999999999997 89999999999876543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-21 Score=145.28 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=60.8
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC--cCccc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD--LRPEK 218 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e--l~~~l 218 (232)
...++|++.+++.+++++|++++++++|||+.||+.|++.+|+. +.+++..+..+..|++++.+..+ +...+
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~---v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG---VAMGQAKEDVKAAADYVTAPIDEDGISKAM 255 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHHHHSSEECCCGGGTHHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCce---EEecCccHHHHhhCCEEeccCchhhHHHHH
Confidence 56788999999999999999999999999999999999999964 44455566667888999988888 65544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-20 Score=138.19 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=60.0
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 205 i~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag---~~vam~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 205 CNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAG---ISYAVSNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEEETTSCHHHHHHSSEEECCGGG
T ss_pred EeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCC---CEEEcCCCCHHHHHhcCeECCCCCC
Confidence 3456778899999999999999999999999999999999999 6666777788889999999887665
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-20 Score=139.36 Aligned_cols=195 Identities=13% Similarity=0.141 Sum_probs=112.1
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHc---CCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (232)
++|+|+||+||||+++...+.+.+.++++++ |+.... ..|+.... ...+++.++.+.-. .....+.....
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~-----aTGR~~~~-~~~~~~~l~~~~~i-~~nGa~i~~~~ 74 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAI-----ATGRAPFM-FEHVRKQLGIDSFV-SFNGQYVVFEG 74 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEE-----ECSSCGGG-SHHHHHHHTCCCEE-EGGGTEEEETT
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEE-----ECCCChHH-HHHHHHhcCCCEEE-ECCCCEEEECC
Confidence 4799999999999998665655555555543 553222 23333322 12233333332100 00000000000
Q ss_pred hh-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCc-h------HHHHHHHhhhcC-----C-------ccccceeecc---
Q 026853 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSH-R------ATIESKISYQHG-----W-------NESFSVIVGS--- 141 (232)
Q Consensus 85 ~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~------~~~~~~l~~~~~-----l-------~~~~~~~~~~--- 141 (232)
+. .......+.+.++++.+++.|+.+.+.++.. . ......+ ...+ + ...++.++..
T Consensus 75 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 153 (258)
T 2pq0_A 75 NVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSM-ASLKFAHPPVDPLYYENKDIYQALLFCRAE 153 (258)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHH-HHTTCCCCCBCTTGGGGSCCCEEEECSCHH
T ss_pred EEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHH-HhhcCCccccccchhhccCceEEEEECCHH
Confidence 11 1122344667778888888777777775543 0 1111122 1111 1 1111111111
Q ss_pred ----------------------cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc
Q 026853 142 ----------------------DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 142 ----------------------~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
+....+..|+.+++.+++++|++++++++|||+.||++|++.+|+.+ .+++..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~v---am~na~~~ 230 (258)
T 2pq0_A 154 EEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGV---AMGNAHEE 230 (258)
T ss_dssp HHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEE---EETTCCHH
T ss_pred HHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEE---EeCCCcHH
Confidence 12335566788999999999999999999999999999999999654 44666777
Q ss_pred cchhhhHhhhhccC
Q 026853 200 RYTAADEVINSLLD 213 (232)
Q Consensus 200 ~~~~~~~~~~~l~e 213 (232)
.+..|++++.+..+
T Consensus 231 ~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 231 VKRVADFVTKPVDK 244 (258)
T ss_dssp HHHTCSEEECCGGG
T ss_pred HHHhCCEEeCCCCc
Confidence 78889988877654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.2e-19 Score=121.81 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=77.0
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhh--hcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~--~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~ 176 (232)
.|+.|++.|++++|+|+. ..+...+ + .+++. + +.+ .++++..++.+++++|++++++++|||+.|
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l-~~l~lgi~-~----~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTL-SALKLDCK-T----EVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHH-HTTCCCCC-E----ECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHH-HHhCCCcE-E----EEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence 689999999999999999 5566677 6 45553 2 221 367899999999999999999999999999
Q ss_pred hhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhc
Q 026853 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 177 Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
|+.+++.+|+.+ .+++..+..+..+++++.+-
T Consensus 111 Di~~~~~ag~~~---a~~na~~~~k~~Ad~v~~~~ 142 (168)
T 3ewi_A 111 DEECLKRVGLSA---VPADACSGAQKAVGYICKCS 142 (168)
T ss_dssp GHHHHHHSSEEE---ECTTCCHHHHTTCSEECSSC
T ss_pred HHHHHHHCCCEE---EeCChhHHHHHhCCEEeCCC
Confidence 999999999663 33445566677788777653
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-20 Score=139.00 Aligned_cols=68 Identities=15% Similarity=0.013 Sum_probs=60.7
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 222 i~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 222 IITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAK---YSYAMANAPKNVKAAANYQAKSNDE 289 (304)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCT---EEEECTTSCHHHHHHCSEECCCGGG
T ss_pred EEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcC---CeEEcCCcCHHHHHhccEEcCCCCc
Confidence 3456778899999999999999999999999999999999999 7777888888889999999888665
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-18 Score=131.18 Aligned_cols=67 Identities=18% Similarity=0.073 Sum_probs=58.0
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhH--hhhhcc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE--VINSLL 212 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~~~l~ 212 (232)
....+.+++.+++.+++.+|++++++++|||+.||++|++.+| +.|++++..++.+..|++ ++.+..
T Consensus 203 i~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag---~~vAm~Na~~~vk~~A~~~~v~~sn~ 271 (285)
T 3pgv_A 203 VMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAG---KGCIMANAHQRLKDLHPELEVIGSNA 271 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCTTSEECCCGG
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcC---CEEEccCCCHHHHHhCCCCEecccCC
Confidence 4456778899999999999999999999999999999999999 888888888888888875 555543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-18 Score=128.24 Aligned_cols=69 Identities=19% Similarity=0.096 Sum_probs=61.2
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+....+.+++.+++.+++++|++++++++|||+.||++|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 187 ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 187 DVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAG---IGVAMGNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHTCSEECCCTTT
T ss_pred EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCC---CeEEeCCCcHHHHHhcCEeeCCCCc
Confidence 34556788899999999999999999999999999999999999 7788888888888899999887655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-18 Score=128.97 Aligned_cols=103 Identities=14% Similarity=0.024 Sum_probs=74.9
Q ss_pred hCCCCEEEEeCCchHHHHHHHhhhcC--Cccccceeecc----cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 105 CHGVPMALASNSHRATIESKISYQHG--WNESFSVIVGS----DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 105 ~~g~~~~i~s~~~~~~~~~~l~~~~~--l~~~~~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
..++++.++++... ....+ +.++ +...++.+.++ +....+++++.+++.+++++|++++++++|||+.||+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~-~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVI-DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHH-HHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHH-HHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 34566777765532 33333 3333 44456666555 3456789999999999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
.|++.+|+. +.+++..+..+..|++++.+..+
T Consensus 221 ~m~~~ag~~---va~~na~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 221 EMLKMARYS---FAMGNAAENIKQIARYATDDNNH 252 (271)
T ss_dssp HHHHHCSEE---EECTTCCHHHHHHCSEECCCGGG
T ss_pred HHHHHcCCe---EEeCCccHHHHHhCCeeCcCCCC
Confidence 999999964 44555666667788888877654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=116.62 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=75.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCc--cccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
..+++||+.++|+.|++.|++++++||.. ...+...| +.+|+. .+++.+++.+.. .||. ....+. ..+
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~--~~~~~~-~~~- 171 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKE--KRRELV-SQT- 171 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSH--HHHHHH-HHH-
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcH--HHHHHH-HhC-
Confidence 45789999999999999999999999998 44566677 778988 667777665542 3443 333333 223
Q ss_pred CCCcEEEEeCchhhhhhhh-------h---------cCCEEEEeCCCCCc
Q 026853 164 EPSSSLVIEDSVIGVVAGK-------A---------AGMEVVAVPSLPKQ 197 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~-------~---------~G~~~i~v~~~~~~ 197 (232)
...+++|||+.+|+.+|. + +|+.++.++++...
T Consensus 172 -~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~ 220 (258)
T 2i33_A 172 -HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYG 220 (258)
T ss_dssp -EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSS
T ss_pred -CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcc
Confidence 234899999999999993 4 89999999885433
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-17 Score=121.09 Aligned_cols=66 Identities=14% Similarity=-0.003 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
..+.+++.+++.++++++++++++++|||+.||+.|++.+|+. +.+++..+..+..|++++.+..+
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~---va~~n~~~~~k~~a~~v~~~~~~ 214 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK---ACPANATDNIKAVSDFVSDYSYG 214 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE---EECTTSCHHHHHHCSEECSCCTT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce---EEecCchHHHHHhCCEEecCCCC
Confidence 4567888999999999999999999999999999999999964 44455555666778887766543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.64 E-value=7.5e-17 Score=121.97 Aligned_cols=65 Identities=22% Similarity=0.125 Sum_probs=51.9
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
.+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+ ++.+ ++..+..+..|++++.+..+
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~--~~~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAM--GNAREDIKSIADAVTLTNDE 277 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEEC--TTCCHHHHHHCSEECCCGGG
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEE--cCCCHHHHhhCceeecCCCc
Confidence 44567888999999999999999999999999999999996 3443 44555566678877766544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-17 Score=123.79 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=55.3
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
...+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+ .|.+++..+..+..|++++.+..+
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~---~va~~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV---GVAVDNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCSEECCCTTT
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc---EEEecCCcHHHHhhCCEEecCCCc
Confidence 4466788999999999999999999999999999999999995 445555556666778888877554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.7e-18 Score=130.47 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=61.8
Q ss_pred cCCCCCCHHHHHHHHHhc----------------------C-----CCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCC
Q 026853 144 VRTGKPSPDIFLEAAKRL----------------------N-----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP 195 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~----------------------~-----~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~ 195 (232)
...+||.+..|+.+++.+ | .++++++||||+. +||.+|+++|+.+++|.+|.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 357899999999887654 2 2679999999999 69999999999999999975
Q ss_pred Ccccc---chhhhHhhhhccCcCcccc
Q 026853 196 KQTHR---YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 196 ~~~~~---~~~~~~~~~~l~el~~~l~ 219 (232)
..... ...|+++++++.|+..+++
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHHHHHHH
T ss_pred CCcccccccCCCCEEECCHHHHHHHHH
Confidence 44332 4678999999999987664
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-16 Score=116.74 Aligned_cols=68 Identities=18% Similarity=0.070 Sum_probs=55.9
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+ .+.+++..+..+..|++++.+..+
T Consensus 184 i~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~---~v~~~n~~~~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL---RVAMENAIEKVKEASDIVTLTNND 251 (268)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE---EEECTTSCHHHHHHCSEECCCTTT
T ss_pred EeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCC---EEEecCCCHHHHhhCCEEEccCCc
Confidence 34567788999999999999999999999999999999999995 455556666666778888876543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.58 E-value=3e-17 Score=126.58 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=71.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeeccccc----------------CCCCCC--
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEV----------------RTGKPS-- 150 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~----------------~~~kp~-- 150 (232)
..+.+++.++++.|++ |+.++++|+.....+.... +..++...+ ......+.. ...++.
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTA-SMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH-HHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccc-hhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 4678999999999999 9999999988766665555 545552211 111100000 000110
Q ss_pred -------------HHHHH------------HHHHhcCCCCCc----EEEEeCchhhhhhhhhc----CCEEEEeCCCCCc
Q 026853 151 -------------PDIFL------------EAAKRLNMEPSS----SLVIEDSVIGVVAGKAA----GMEVVAVPSLPKQ 197 (232)
Q Consensus 151 -------------~~~~~------------~~~~~~~~~~~~----~~~vgD~~~Di~~a~~~----G~~~i~v~~~~~~ 197 (232)
+..+. .+++ ++++++ +++|||+.||+.|++.+ |+.+++ + ..
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-n---a~ 253 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-N---GN 253 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-S---CC
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-c---CC
Confidence 11121 1222 677888 99999999999999999 976444 3 34
Q ss_pred cccchhhhHhhhhc
Q 026853 198 THRYTAADEVINSL 211 (232)
Q Consensus 198 ~~~~~~~~~~~~~l 211 (232)
+..+..|++++.+.
T Consensus 254 ~~lk~~Ad~v~~~~ 267 (332)
T 1y8a_A 254 EYALKHADVVIISP 267 (332)
T ss_dssp HHHHTTCSEEEECS
T ss_pred HHHHhhCcEEecCC
Confidence 55566778777663
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6.8e-15 Score=111.92 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=84.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhh--------cCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~--------~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
.++||+.++|+.|+++|++++++||..... +...+ +. +|+ .|+.+++.+.. ..||+|..+..+++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW 263 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence 468999999999999999999999997543 34455 55 788 58888876654 46899999999999
Q ss_pred hcCCCCCc-EEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 160 ~~~~~~~~-~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
+++.++.+ +++|||+.+|+.+|+++|+.+++|.+|
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99887655 689999999999999999999999986
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.6e-16 Score=118.83 Aligned_cols=67 Identities=13% Similarity=0.045 Sum_probs=54.5
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh-hccC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN-SLLD 213 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~-~l~e 213 (232)
...+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+. +.+++..+..+..|++++. +..+
T Consensus 219 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~---va~~na~~~~k~~a~~v~~~~~~~ 286 (301)
T 2b30_A 219 TKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS---FAVANATDSAKSHAKCVLPVSHRE 286 (301)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE---EECTTCCHHHHHHSSEECSSCTTT
T ss_pred cCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe---EEEcCCcHHHHhhCCEEEccCCCC
Confidence 34667889999999999999999999999999999999999954 4455555666677888777 5443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-16 Score=118.09 Aligned_cols=53 Identities=8% Similarity=-0.073 Sum_probs=43.9
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCC--CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT 198 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~--~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~ 198 (232)
+.... ++++.+++.+++++|+++ +++++|||+.||+.|++.+|+. |.+++..+
T Consensus 170 ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~---va~~na~~ 224 (259)
T 3zx4_A 170 HAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA---VYVGRGDP 224 (259)
T ss_dssp EEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE---EECSSSCC
T ss_pred EEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe---EEeCChhh
Confidence 34455 888999999999999999 9999999999999999999944 44444444
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.6e-12 Score=100.41 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=81.3
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc-C-------------CccccceeecccccCC--C--C--
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------------WNESFSVIVGSDEVRT--G--K-- 148 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-~-------------l~~~~~~~~~~~~~~~--~--k-- 148 (232)
.+...|++...|..|++.| +++++||+....+...+ +.+ | |..+||.++.....+. . .
T Consensus 244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m-~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pf 321 (555)
T 2jc9_A 244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIM-TYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVL 321 (555)
T ss_dssp HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHH-HHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCE
T ss_pred hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHH-HHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcc
Confidence 4567789999999999999 99999999999888877 554 5 6678998665422110 0 0
Q ss_pred -------------------CCHHH-----HHHHHHhcCCCCCcEEEEeCch-hhhhhhh-hcCCEEEEeCC
Q 026853 149 -------------------PSPDI-----FLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (232)
Q Consensus 149 -------------------p~~~~-----~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~-~~G~~~i~v~~ 193 (232)
.++.. +..+++.+|+.+++|++|||.. .||..++ .+||.|++|..
T Consensus 322 r~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 322 RQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp EEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred eEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 00111 5889999999999999999999 8999997 99999999987
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.39 E-value=4.8e-13 Score=98.91 Aligned_cols=68 Identities=4% Similarity=-0.224 Sum_probs=55.4
Q ss_pred ccCCCCCCHHHHHHHHHhcCC-CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc-cccchhhhHhhhhccCc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDL 214 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~-~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~~~l~el 214 (232)
... +..|+.+++.+++.+++ +++++++|||+.||++|++.+|+. |.+++.. ++.+..|++++++..+-
T Consensus 174 i~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~---va~gna~~~~~~~~a~~v~~~~~~~ 243 (249)
T 2zos_A 174 VHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV---FIVGSLKHKKAQNVSSIIDVLEVIK 243 (249)
T ss_dssp EEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE---EEESSCCCTTEEEESSHHHHHHHHH
T ss_pred EeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE---EEeCCCCccccchhceEEecccccc
Confidence 445 67788999999999998 999999999999999999999954 4455555 45666799998887653
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-11 Score=90.32 Aligned_cols=98 Identities=14% Similarity=0.272 Sum_probs=71.2
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchH----HHHHHHhhhcCCccccc-eeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA----TIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~----~~~~~l~~~~~l~~~~~-~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
..+++||+.++++.|++.|++++++|+.+.. .+...| +.+|+..+++ .++.... ++.+......+...|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~gy 173 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMGY 173 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcCC
Confidence 4689999999999999999999999999654 677778 8889987664 3443322 2333555555555453
Q ss_pred CCCcEEEEeCchhhhhh--------hhh---------cCCEEEEeCC
Q 026853 164 EPSSSLVIEDSVIGVVA--------GKA---------AGMEVVAVPS 193 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~--------a~~---------~G~~~i~v~~ 193 (232)
.-+++|||+.+|+.+ .+. .|-..|.+++
T Consensus 174 --~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPN 218 (260)
T 3pct_A 174 --DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPN 218 (260)
T ss_dssp --EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred --CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCC
Confidence 348999999999998 222 6666777766
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1e-11 Score=91.06 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=70.9
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCch----HHHHHHHhhhcCCccccc-eeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~----~~~~~~l~~~~~l~~~~~-~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
..+++||+.++++.|++.|++++++|+.+. ..+...| +.+|+..+.+ .++.... ...+......+.+. |.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy 173 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKD---KSAKAARFAEIEKQ-GY 173 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESS---CSCCHHHHHHHHHT-TE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCC---CCChHHHHHHHHhc-CC
Confidence 468999999999999999999999999865 4677778 8889987663 4443322 12334444444444 43
Q ss_pred CCCcEEEEeCchhhhhhhh-----------------hcCCEEEEeCCC
Q 026853 164 EPSSSLVIEDSVIGVVAGK-----------------AAGMEVVAVPSL 194 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~-----------------~~G~~~i~v~~~ 194 (232)
..+++|||..+|+.++. ..|-..|.++++
T Consensus 174 --~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp 219 (262)
T 3ocu_A 174 --EIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNA 219 (262)
T ss_dssp --EEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCS
T ss_pred --CEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 24899999999999832 266677777663
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=95.39 Aligned_cols=67 Identities=18% Similarity=0.013 Sum_probs=53.3
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchh-------hhHhhhhcc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA-------ADEVINSLL 212 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~-------~~~~~~~l~ 212 (232)
....+.+++.+++.+++.+|++++++++|||+.||+.|++.+|+ .+.+++..+..+.. +++++.+..
T Consensus 156 i~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~---~va~~na~~~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 156 LLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR---GVIVRNAQPELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE---EEECTTCCHHHHHHHHHHCCTTEEECSSCH
T ss_pred eccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCc---EEEEcCCcHHHHHHHhcccccceeecCCcc
Confidence 34567788999999999999999999999999999999999995 44455555655554 567665543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-13 Score=95.76 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=88.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.+.+.||+.++|+++++. +.++|+|++....+...+ +.++...+|+.+++.+++...| ..|.+.++.+|.++++|
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~ 140 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKV 140 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGE
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHE
Confidence 357899999999999998 999999999999999999 8999999999999888776555 45778889999999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++|||+.+++.++..+|+.+..+..
T Consensus 141 vivDDs~~~~~~~~~ngi~i~~~~~ 165 (195)
T 2hhl_A 141 IIVDNSPASYIFHPENAVPVQSWFD 165 (195)
T ss_dssp EEEESCGGGGTTCGGGEEECCCCSS
T ss_pred EEEECCHHHhhhCccCccEEeeecC
Confidence 9999999999999999977554443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.7e-12 Score=104.73 Aligned_cols=111 Identities=11% Similarity=0.135 Sum_probs=84.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++++.++.|++.|++++++|+.....+.... +.+|+...+..+. +..+...++ .++.. ++++|
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~~~~~~~~-------P~~K~~~v~----~l~~~-~~v~~ 523 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEVL-------PHQKSEEVK----KLQAK-EVVAF 523 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCC-------TTCHHHHHH----HHTTT-CCEEE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEeCC-------HHhHHHHHH----HHhhC-CeEEE
Confidence 57899999999999999999999999999988887 8889865443321 223333444 33333 78999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCcc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~~ 217 (232)
|||+.||+.|++.+| +++.+|+..+..+..+|+++ +++.++...
T Consensus 524 vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~ 569 (645)
T 3j08_A 524 VGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIRDDLRDVVAA 569 (645)
T ss_dssp EECSSSCHHHHHHSS---EEEEECCCSCCSSCCSSSEESSCCTTHHHHH
T ss_pred EeCCHhHHHHHHhCC---EEEEeCCCcHHHHHhCCEEEecCCHHHHHHH
Confidence 999999999999999 66776665666677788877 556555443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.23 E-value=9.4e-13 Score=98.76 Aligned_cols=67 Identities=7% Similarity=-0.139 Sum_probs=43.2
Q ss_pred ccCCCCCCHHHHHHHHHhcC-CCCCc--EEEEeCchhhhhhhhhcCCEEEEeCCCCCc---cccch--hhh-Hhhhhcc
Q 026853 143 EVRTGKPSPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---THRYT--AAD-EVINSLL 212 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~-~~~~~--~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~---~~~~~--~~~-~~~~~l~ 212 (232)
....+.+++.+++.+++.+| +++++ +++|||+.||+.|++.+|+. |.+++.. .+.+. .|+ +++.+..
T Consensus 183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~---va~~n~~~~~~~~~~~~~a~~~v~~~~~ 258 (275)
T 1xvi_A 183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA---VIVKGLNREGVHLHDEDPARVWRTQREG 258 (275)
T ss_dssp EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE---EECCCCC---------------------
T ss_pred EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce---EEecCCCccchhhccccCCceeEccCCC
Confidence 34567788999999999999 99999 99999999999999999964 4443333 33333 367 7776544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-10 Score=89.35 Aligned_cols=101 Identities=13% Similarity=0.062 Sum_probs=66.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecc------------cc-----cCCCCCCH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGS------------DE-----VRTGKPSP 151 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~------------~~-----~~~~kp~~ 151 (232)
+++|+++++++.|+++|++++|+|++....++... +.+|+...+ +.|++. .. ...+..++
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia-~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFA-TDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 37999999999999999999999999999998877 776642211 222221 10 01111133
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCE--EEEeCC
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME--VVAVPS 193 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~--~i~v~~ 193 (232)
..++..++. ++....++++|||.+|+.|++..+-. .+.+++
T Consensus 300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 300 QTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp HHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred HHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 344444322 24456699999999999999974432 344554
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-10 Score=87.62 Aligned_cols=105 Identities=17% Similarity=0.076 Sum_probs=69.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc----c------------cCCCCCCHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----E------------VRTGKPSPD 152 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~----~------------~~~~kp~~~ 152 (232)
..++.||+.++++.|++.|++++++|++....++... +.+|+...-..+++.. + ....|+.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~-~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHH-HHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH-HHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 4789999999999999999999999999999988888 8888754322222211 0 001121121
Q ss_pred HHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
.-......+.-..++++++|||.||+.|++.+...-+++..|
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG 259 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG 259 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence 111222344446678999999999999977443332444443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-12 Score=90.83 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=84.7
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.+.++||+.++|+++++. +.++|+|++....+...+ +.++...+|+.+++.+++...| ..+.+.++.+|.++++|
T Consensus 53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~ 127 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceE
Confidence 357899999999999998 999999999999999999 8899989999998887765443 35677888999999999
Q ss_pred EEEeCchhhhhhhhhcCCEEE
Q 026853 169 LVIEDSVIGVVAGKAAGMEVV 189 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i 189 (232)
++|||+..++.++..+|+...
T Consensus 128 vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 128 LILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp EEECSCGGGGTTCTTSBCCCC
T ss_pred EEEeCCHHHhccCcCCEeEec
Confidence 999999999999999997743
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.3e-13 Score=99.42 Aligned_cols=66 Identities=5% Similarity=-0.184 Sum_probs=53.1
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeC----chhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+..|..+++.+ +|++++++++||| +.||++|++.+|...+.+ ++..+..+..|++++++..+
T Consensus 191 I~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 191 VFPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp EEETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHCTTC--
T ss_pred EecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHHhhheeCCCCcC
Confidence 345667778888888 8999999999999 999999999998755666 56677778889998876543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-12 Score=95.57 Aligned_cols=59 Identities=7% Similarity=-0.156 Sum_probs=44.4
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeC----chhhhhhhhhcCCEEEEeCCCCCccccchhhhHh
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 207 (232)
...+..|..+++.+ +|++++++++||| +.||++|.+.+|.. .+..++..++.+..|+++
T Consensus 183 ~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~a--g~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 183 FPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTM--GYSVTAPEDTRRICELLF 245 (246)
T ss_dssp EETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEE--EEECSSHHHHHHHHHHHC
T ss_pred ecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcc--eEEeeCCCHHHHHHHhhc
Confidence 44566677788777 8999999999999 99999999999843 444555666777777765
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=5.9e-08 Score=74.00 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=33.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhh
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~ 128 (232)
.++|++.++++.|+++|+.++|+|.+....++... ..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a-~~ 179 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVA-AD 179 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-TC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hh
Confidence 58999999999999999999999999999988776 44
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.96 E-value=7.8e-10 Score=93.22 Aligned_cols=111 Identities=11% Similarity=0.135 Sum_probs=84.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++.+.++.|++.|++++++|+.....+.... +.+|+...+..+. +..+...++ .++-. ++++|
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~~~~~~~~-------P~~K~~~v~----~l~~~-~~v~~ 601 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEVL-------PHQKSEEVK----KLQAK-EVVAF 601 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCC-------TTCHHHHHH----HHTTT-CCEEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCcEEEccCC-------HHHHHHHHH----HHhcC-CeEEE
Confidence 57899999999999999999999999999888777 8889864433221 222333333 33333 78999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCcc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~~ 217 (232)
|||+.||+.|++.+| +++++|+..+..+..+|+++ +++..+...
T Consensus 602 vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 602 VGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp EECSSTTHHHHHHSS---EEEECCCCSCCSSCCSSEECSSCCTTHHHHH
T ss_pred EECChhhHHHHhhCC---EEEEeCCCcHHHHHhCCEEEeCCCHHHHHHH
Confidence 999999999999999 77888766666678888887 555555443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.93 E-value=5.4e-08 Score=76.85 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=79.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc--------CCccccceeecccccC----------------
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEVR---------------- 145 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--------~l~~~~~~~~~~~~~~---------------- 145 (232)
+...|.+...|.+|++.|.++.++||+....+...+.-.+ .|..+||.||+....+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 3457889999999999999999999999988776662223 4889999998753210
Q ss_pred -----CC---CCC---HHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhh-hcCCEEEEeCC
Q 026853 146 -----TG---KPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (232)
Q Consensus 146 -----~~---kp~---~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~-~~G~~~i~v~~ 193 (232)
.. ++. ..-.....+.+|....+|++|||+. .||..++ ..||.|++|..
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 00 110 1225677788899999999999999 8977766 57999999987
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.92 E-value=8.3e-10 Score=92.80 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=83.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.+++++.+++|++.|++++++|+.....+.... +.+|+...+..+ .|+....+++.++-..+.++|
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia-~~lgi~~v~a~~-----------~P~~K~~~v~~l~~~g~~V~~ 621 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA-GTLGIKKVVAEI-----------MPEDKSRIVSELKDKGLIVAM 621 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HHHTCCCEECSC-----------CHHHHHHHHHHHHHHSCCEEE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCEEEEec-----------CHHHHHHHHHHHHhcCCEEEE
Confidence 57899999999999999999999999999888777 888986533322 233444455555445678999
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcC
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLR 215 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~ 215 (232)
|||+.||+.|.+.+| +++++|+..+..+..+|+++ +++..+.
T Consensus 622 vGDG~ND~paL~~Ad---vGIAmg~g~d~a~~~AD~vl~~~~~~~i~ 665 (736)
T 3rfu_A 622 AGDGVNDAPALAKAD---IGIAMGTGTDVAIESAGVTLLHGDLRGIA 665 (736)
T ss_dssp EECSSTTHHHHHHSS---EEEEESSSCSHHHHHCSEEECSCCSTTHH
T ss_pred EECChHhHHHHHhCC---EEEEeCCccHHHHHhCCEEEccCCHHHHH
Confidence 999999999999999 67777665666677788776 4444443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.80 E-value=2e-09 Score=93.93 Aligned_cols=122 Identities=12% Similarity=0.032 Sum_probs=79.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccc----eeecccccCCCC----------------CC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVRTGK----------------PS 150 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~----~~~~~~~~~~~k----------------p~ 150 (232)
++.|++.+.++.|++.|++++++|+.....+.... +.+|+....+ .++.+++....+ -.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia-~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 57899999999999999999999999999888777 8889865321 222222111100 01
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCcCc
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el~~ 216 (232)
|+....+++.++-..+.++|+||+.||+.|++.++ +++++|+..+..+..+|+++ +++..+..
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Ad---vgiamg~g~~~ak~aAd~vl~~~~~~~i~~ 746 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAE---IGIAMGSGTAVAKTASEMVLADDNFSTIVA 746 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHST---EEEEETTSCHHHHHTCSEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCC---eEEEeCCCCHHHHHhCCEEECCCCHHHHHH
Confidence 22233333444333578999999999999999999 55555433333355667666 33444433
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.1e-09 Score=76.04 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=76.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc-cccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
+...||+.++|+.++ .++.++|.|.+....+...+ +.++.. .+|+..+..+.+.... ..+.+.++.+|.++++|
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~v 132 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKV 132 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGE
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHE
Confidence 578999999999998 56999999999999999999 888876 4788777665543211 12456677889999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEe
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAV 191 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v 191 (232)
+.|+|+.+-..+....|+....+
T Consensus 133 IiIDDsp~~~~~~p~N~I~I~~~ 155 (204)
T 3qle_A 133 IIIDTDPNSYKLQPENAIPMEPW 155 (204)
T ss_dssp EEEESCTTTTTTCGGGEEECCCC
T ss_pred EEEECCHHHHhhCccCceEeeeE
Confidence 99999999888877788544433
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=6.6e-11 Score=87.15 Aligned_cols=46 Identities=9% Similarity=-0.163 Sum_probs=37.5
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc----hhhhhhhhhcCCEEEEeCC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS----VIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~----~~Di~~a~~~G~~~i~v~~ 193 (232)
...+-.|..+++.+++ +++++++|||+ .||++|.+.+|...+.|.+
T Consensus 182 ~~~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 182 FPVGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp EETTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred EeCCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 4456667778888877 89999999995 9999999988866677765
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.67 E-value=6.4e-09 Score=80.33 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=65.4
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc-ccc-eeecccccCCCCCCHHHHHHHHHhc-CCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEP 165 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~-~~~~~~~~~~~kp~~~~~~~~~~~~-~~~~ 165 (232)
.+...||+.++|+.++ .++.++|.|.+....+...+ +.++... +|+ .+++.+..+. .+.+.++.+ |.++
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl 144 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDT 144 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCC
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCC
Confidence 5678999999999999 55999999999999999998 8888776 677 5665655432 122335555 8999
Q ss_pred CcEEEEeCchhhhhh
Q 026853 166 SSSLVIEDSVIGVVA 180 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~ 180 (232)
++|+.|+|++.-...
T Consensus 145 ~~viiiDd~~~~~~~ 159 (372)
T 3ef0_A 145 SMVVVIDDRGDVWDW 159 (372)
T ss_dssp TTEEEEESCSGGGTT
T ss_pred ceEEEEeCCHHHcCC
Confidence 999999999964433
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.62 E-value=4.5e-08 Score=85.64 Aligned_cols=115 Identities=16% Similarity=0.098 Sum_probs=76.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc------------------------ceeeccccc--
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEV-- 144 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~------------------------~~~~~~~~~-- 144 (232)
++.|++.+.++.|++.|++++++|+.....+.... +.+|+...- ..++.+...
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 46799999999999999999999999998888777 778875210 111111110
Q ss_pred ----------------CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC-CccccchhhhHh
Q 026853 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP-KQTHRYTAADEV 207 (232)
Q Consensus 145 ----------------~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~~~~~ 207 (232)
......|+....+.+.++-..+.++++||+.||+.|.+.|+ ++|++|. ..+..+..+|++
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~Ad---vGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKAD---IGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSS---EEEEESSSCCHHHHHHCSEE
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCC---ceEEeCCccCHHHHHhcCEE
Confidence 11123344444444333333467999999999999999999 6666652 334445666766
Q ss_pred hh
Q 026853 208 IN 209 (232)
Q Consensus 208 ~~ 209 (232)
+.
T Consensus 755 l~ 756 (1028)
T 2zxe_A 755 LL 756 (1028)
T ss_dssp ET
T ss_pred ec
Confidence 53
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.1e-08 Score=86.02 Aligned_cols=116 Identities=15% Similarity=0.087 Sum_probs=79.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc------------------------ceeeccccc--
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEV-- 144 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~------------------------~~~~~~~~~-- 144 (232)
++.+++++.++.|++.|++++++|+.....+.... +.+|+...- ..++.+...
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA-ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 57889999999999999999999999998887776 777774210 011111100
Q ss_pred ----------------CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC-CCccccchhhhHh
Q 026853 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEV 207 (232)
Q Consensus 145 ----------------~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~ 207 (232)
......|.....+.+.++-..+.++++||+.||+.|.+.|| ++|++| +..+..+..||++
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~---vGIAMg~ng~d~aK~aAD~V 759 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKAD---IGVAMGIAGSDAAKNAADMI 759 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCC---eeEEeCCccCHHHHHhcCEE
Confidence 01112233333344444333466999999999999999999 777776 5566667788887
Q ss_pred hhh
Q 026853 208 INS 210 (232)
Q Consensus 208 ~~~ 210 (232)
+.+
T Consensus 760 l~~ 762 (1034)
T 3ixz_A 760 LLD 762 (1034)
T ss_pred ecc
Confidence 754
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.2e-07 Score=81.39 Aligned_cols=114 Identities=16% Similarity=0.091 Sum_probs=74.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc-c-ceeeccccc-----------------CCCCCCH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-F-SVIVGSDEV-----------------RTGKPSP 151 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~-~-~~~~~~~~~-----------------~~~kp~~ 151 (232)
++.|++++.++.|++.|+++.++|+.....+.... +.+|+... + +.++.+.+. ....-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA-~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHH-HTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHH-HHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 46789999999999999999999999998887776 88887431 1 111111100 0111233
Q ss_pred HHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
+--..+.+.+.-..+.+.|+||+.||..|.+.++ +++++++..+..+..+|+++
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~Ad---vGIAmg~gtd~ak~aADivl 620 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKAD---IGIAVADATDAARGASDIVL 620 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSS---SCCCCSSSHHHHGGGCSSCC
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCC---EeEEeCCccHHHHHhcceee
Confidence 3333333333323467999999999999999999 66777543333355566654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=4.2e-07 Score=78.21 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=72.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-c--e-eecc----------------cccCCCCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-S--V-IVGS----------------DEVRTGKPS 150 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~--~-~~~~----------------~~~~~~kp~ 150 (232)
++.|++++.++.|++.|+++.++|+.....+.... +.+|+.... + . ++.+ ..+..-.|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA-~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P- 612 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS-RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP- 612 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS-
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH-HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH-
Confidence 47899999999999999999999999999888777 888985311 0 0 0000 00111222
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
+--..+.+.+.-..+.|.|+||+.||..|.+.++ +++++++..+..+..+|+++
T Consensus 613 -~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~Ad---vGIAmg~gtd~ak~aADiVl 666 (920)
T 1mhs_A 613 -QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKAD---TGIAVEGSSDAARSAADIVF 666 (920)
T ss_dssp -THHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSS---EEEEETTSCHHHHHSSSEEE
T ss_pred -HHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCC---cCcccccccHHHHHhcCeEE
Confidence 2222233333223477999999999999999999 55655533333345555554
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.7e-06 Score=57.47 Aligned_cols=39 Identities=18% Similarity=0.042 Sum_probs=29.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCch---HHHHHHHhhhcCC
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGW 131 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~l 131 (232)
+.|++.+.|+.|+++|+.++++|+.+. ..+...+ +..|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l-~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH-HHcCC
Confidence 456899999999999999999999874 3334444 45555
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.06 E-value=5.4e-07 Score=68.30 Aligned_cols=96 Identities=11% Similarity=0.101 Sum_probs=66.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeeccccc---C-CCCCCHHHHHHHHHhc---
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEV---R-TGKPSPDIFLEAAKRL--- 161 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~---~-~~kp~~~~~~~~~~~~--- 161 (232)
...|++.+||+.+.+. +.++|.|.+....+...+ +.++....+ ...+..+.. . ..+..+..+.+-++.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~ 241 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL 241 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence 4789999999999965 999999999999999999 877765442 221211111 0 0111121233345555
Q ss_pred --CCCCCcEEEEeCchhhhhhhhhcCCEE
Q 026853 162 --NMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (232)
Q Consensus 162 --~~~~~~~~~vgD~~~Di~~a~~~G~~~ 188 (232)
|.++++|+.|+|++.-..+....|+..
T Consensus 242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~I 270 (320)
T 3shq_A 242 YKQYNSSNTIMFDDIRRNFLMNPKSGLKI 270 (320)
T ss_dssp CTTCCGGGEEEEESCGGGGTTSGGGEEEC
T ss_pred cCCCChhHEEEEeCChHHhccCcCceEEe
Confidence 788999999999998888888888443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.01 E-value=2.5e-06 Score=55.85 Aligned_cols=29 Identities=3% Similarity=0.047 Sum_probs=24.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRA 119 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~ 119 (232)
.+.++..+.++++++.|++++++|+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 45677889999999999999999998754
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.86 E-value=6.2e-06 Score=60.25 Aligned_cols=56 Identities=11% Similarity=-0.010 Sum_probs=41.8
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc--CCEEEEeCCCCCccccchhhhHhhhh
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINS 210 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (232)
....+-.|..+++.+++.+| +++|||+.||+.|.+.+ |. .|.+++. +..|++++.+
T Consensus 154 i~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~---~vam~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 154 LRVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDAL---TIKVGEG----ETHAKFHVAD 211 (239)
T ss_dssp EECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSE---EEEESSS----CCCCSEEESS
T ss_pred EEcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCc---EEEECCC----CCcceEEeCC
Confidence 34556678899999999998 99999999999999999 94 4444443 2345555444
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00011 Score=53.55 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=27.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 125 (232)
+.+...+.|++|+++| .++++|+.+...+...+
T Consensus 24 i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~ 56 (239)
T 1u02_A 24 ADAGLLSLISDLKERF-DTYIVTGRSPEEISRFL 56 (239)
T ss_dssp CCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHh
Confidence 4466778999999999 99999999988877666
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.02 Score=44.14 Aligned_cols=87 Identities=20% Similarity=0.151 Sum_probs=61.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
..+.|++.++++.|++.|++++++||+. .......+.+.+|+....+.++++...... .++ ...
T Consensus 28 ~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~---------~~~----~~~ 94 (352)
T 3kc2_A 28 KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS---------LVN----KYS 94 (352)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG---------GTT----TCS
T ss_pred CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH---------HHh----cCC
Confidence 3578999999999999999999999985 344444553468987777777766432110 011 235
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEE
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVA 190 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~ 190 (232)
.++++|-. .-...++.+|+..+.
T Consensus 95 ~v~viG~~-~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 95 RILAVGTP-SVRGVAEGYGFQDVV 117 (352)
T ss_dssp EEEEESST-THHHHHHHHTCSEEE
T ss_pred EEEEECCH-HHHHHHHhCCCeEec
Confidence 68888865 667778889988775
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.053 Score=39.03 Aligned_cols=81 Identities=16% Similarity=0.180 Sum_probs=60.0
Q ss_pred CCCEEEEeCCchHHHHHHHhhhcCCcccc--ceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc
Q 026853 107 GVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (232)
Q Consensus 107 g~~~~i~s~~~~~~~~~~l~~~~~l~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~ 184 (232)
+..-++||++.--..-.++ -.+++...| +.++++-.+ .+...|+++.+++| +.-.-++|||+...-++|+.+
T Consensus 176 ~~vNVLVTs~qLVPaLaK~-LLygL~~~fpieNIYSa~ki----GKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~ 249 (274)
T 3geb_A 176 NCVNVLVTTTQLIPALAKV-LLYGLGSVFPIENIYSATKT----GKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKH 249 (274)
T ss_dssp TEEEEEEESSCHHHHHHHH-HHTTCTTTSCGGGEEETTTT----CHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHT
T ss_pred ceeEEEEecCchHHHHHHH-HHhhcccceecccccchhhc----CHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHc
Confidence 4566788887654443444 446777766 445555443 35689999999998 346678899999999999999
Q ss_pred CCEEEEeCC
Q 026853 185 GMEVVAVPS 193 (232)
Q Consensus 185 G~~~i~v~~ 193 (232)
+++++-|..
T Consensus 250 n~PFwrI~~ 258 (274)
T 3geb_A 250 NMPFWRISC 258 (274)
T ss_dssp TCCEEECCS
T ss_pred CCCeEEeec
Confidence 999998876
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0038 Score=49.22 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=62.0
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc-ccce-eecccccCCCCCCHHHHHHHHHh-cCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSV-IVGSDEVRTGKPSPDIFLEAAKR-LNMEP 165 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~-~~~~-~~~~~~~~~~kp~~~~~~~~~~~-~~~~~ 165 (232)
.+...||+.+||+.+++ .+.++|+|.+...++...+ +.++-.. +|.. +++.+..+.. +.+-+.+ +|.+.
T Consensus 81 ~V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl-~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl 152 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT 152 (442)
T ss_dssp EEEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHH-HHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred EEEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHH-HHhccCCccccceEEEecCCCCc------eeeehHHhcCCCc
Confidence 46789999999999985 5999999999999999998 8887665 6765 5555554421 1112443 48889
Q ss_pred CcEEEEeCchhhh
Q 026853 166 SSSLVIEDSVIGV 178 (232)
Q Consensus 166 ~~~~~vgD~~~Di 178 (232)
+.++.|+|++.-.
T Consensus 153 ~~vvIIDd~p~~~ 165 (442)
T 3ef1_A 153 SMVVVIDDRGDVW 165 (442)
T ss_dssp TTEEEEESCSGGG
T ss_pred ceEEEEECCHHHh
Confidence 9999999998533
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.063 Score=39.78 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeC---CchHHHHHHHhhhcCCc-cccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~l~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
+.+++.+.|+.+++.|++++++|| .........+ +.+|+. ..++.++++.. .....+++ +.+. +
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l-~~lg~~~~~~~~ii~~~~---------~~~~~l~~-~~~~-~ 98 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY-HKLGLFSITADKIISSGM---------ITKEYIDL-KVDG-G 98 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCTTCCGGGEEEHHH---------HHHHHHHH-HCCS-E
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH-HHCCcCCCCHhhEEcHHH---------HHHHHHHh-hcCC-c
Confidence 467889999999999999999998 4555566677 777887 66666665432 22222222 2223 6
Q ss_pred EE-EEeCchhhhhhhhhcCCE
Q 026853 168 SL-VIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 168 ~~-~vgD~~~Di~~a~~~G~~ 187 (232)
++ .+|.. .....++..|+.
T Consensus 99 v~~~lg~~-~l~~~l~~~G~~ 118 (284)
T 2hx1_A 99 IVAYLGTA-NSANYLVSDGIK 118 (284)
T ss_dssp EEEEESCH-HHHHTTCBTTEE
T ss_pred EEEEecCH-HHHHHHHHCCCe
Confidence 77 78875 556666677764
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.098 Score=38.28 Aligned_cols=83 Identities=27% Similarity=0.330 Sum_probs=52.1
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
.+++.+.++.+++.|++++++||+.... ....+ ..+|+....+.++++.. .....+++.. +..++.
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l-~~lg~~~~~~~i~~~~~---------~~~~~l~~~~-~~~~v~ 87 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL-LKMGIDVSSSIIITSGL---------ATRLYMSKHL-DPGKIF 87 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH-HTTTCCCCGGGEEEHHH---------HHHHHHHHHS-CCCCEE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEEecHH---------HHHHHHHHhC-CCCEEE
Confidence 4788899999999999999999986533 33344 45677655566665422 2333333322 235677
Q ss_pred EEeCchhhhhhhhhcCCE
Q 026853 170 VIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G~~ 187 (232)
.+|+. .....++..|+.
T Consensus 88 viG~~-~l~~~l~~~G~~ 104 (263)
T 1zjj_A 88 VIGGE-GLVKEMQALGWG 104 (263)
T ss_dssp EESCH-HHHHHHHHHTSC
T ss_pred EEcCH-HHHHHHHHcCCe
Confidence 77774 555566666653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.37 E-value=0.099 Score=38.24 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=38.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeC---CchHHHHHHHhhhcCCccccceeecc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGS 141 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~l~~~~~~~~~~ 141 (232)
+.|+..+.|++++++|++++++|| .+...+...+ +.+|+....+.++++
T Consensus 25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l-~~lg~~~~~~~ii~~ 76 (268)
T 3qgm_A 25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERL-RSFGLEVGEDEILVA 76 (268)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHH-HHTTCCCCGGGEEEH
T ss_pred eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHH-HHCCCCCCHHHeeCH
Confidence 456788999999999999999999 4566666677 777886655666543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=92.05 E-value=0.13 Score=40.07 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=17.7
Q ss_pred ccEEEEeCCCcccccHHHHHHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEV 30 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~ 30 (232)
+|.|+||+|||+++....+..+
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~ 22 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS 22 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEecCceeechhhhccHH
Confidence 4789999999999887665543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.73 E-value=0.26 Score=35.91 Aligned_cols=46 Identities=15% Similarity=0.255 Sum_probs=34.3
Q ss_pred CcHHHHHHHHHhCCCCEEEEeC---CchHHHHHHHhhhcCCccccceeec
Q 026853 94 PGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVG 140 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~l~~~~~~~~~ 140 (232)
|+..+.|++++++|++++++|| .+...+...+ +.+|+....+.+++
T Consensus 25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l-~~lg~~~~~~~ii~ 73 (266)
T 3pdw_A 25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL-VSFDIPATEEQVFT 73 (266)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHH-HHTTCCCCGGGEEE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHHHccC
Confidence 4567899999999999999998 4555566667 77787654455543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=90.72 E-value=0.087 Score=36.05 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=14.5
Q ss_pred ccccEEEEeCCCccccc
Q 026853 7 KLMSCVILDLDGTLLNT 23 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~ 23 (232)
..+|+++||+||||++.
T Consensus 12 ~~~k~~~~D~Dgtl~~~ 28 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISE 28 (176)
T ss_dssp -CCEEEEECSBTTTBCC
T ss_pred CcCcEEEEeCCCCeEcC
Confidence 35899999999999876
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=90.65 E-value=0.3 Score=35.62 Aligned_cols=46 Identities=20% Similarity=0.408 Sum_probs=35.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEeC---CchHHHHHHHhhhcCCccccceeec
Q 026853 94 PGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVG 140 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~l~~~~~~~~~ 140 (232)
|+..+.|++++++|++++++|| .+...+...+ +.+|+....+.+++
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l-~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML-RGFNVETPLETIYT 72 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH-HTTTCCCCGGGEEE
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhheec
Confidence 6888999999999999999995 4555666677 77787665555554
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=89.65 E-value=1.6 Score=30.48 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=52.1
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~ 174 (232)
++.+.|..+++.+-++++++-.....--..+.+.+++.-.+-.+.+.++. +....-++.-|++ ++|||+
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~-------~~~i~~l~~~G~~----vvVG~~ 150 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEI-------TTLISKVKTENIK----IVVSGK 150 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGH-------HHHHHHHHHTTCC----EEEECH
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHH-------HHHHHHHHHCCCe----EEECCH
Confidence 55666777777777888887654322222332555653222111112221 2223333444665 799988
Q ss_pred hhhhhhhhhcCCEEEEeCCC
Q 026853 175 VIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 175 ~~Di~~a~~~G~~~i~v~~~ 194 (232)
.. ...|++.|++++.+.+|
T Consensus 151 ~~-~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 151 TV-TDEAIKQGLYGETINSG 169 (196)
T ss_dssp HH-HHHHHHTTCEEEECCCC
T ss_pred HH-HHHHHHcCCcEEEEecC
Confidence 86 78899999999999874
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.73 E-value=0.16 Score=35.54 Aligned_cols=17 Identities=41% Similarity=0.768 Sum_probs=14.6
Q ss_pred cccEEEEeCCCcccccH
Q 026853 8 LMSCVILDLDGTLLNTD 24 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~ 24 (232)
..+++++|+||||+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 45799999999999873
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=88.10 E-value=0.7 Score=34.09 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=31.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.|++++++|+.++++|+++...+...+ +.+++..
T Consensus 25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~-~~l~l~~ 63 (282)
T 1rkq_A 25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYL-KELHMEQ 63 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHH-HHTTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCC
Confidence 34457899999999999999999988887777 7777654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=87.75 E-value=0.99 Score=33.18 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.|++|+++|++++++|+++...+...+ +.+++..
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 67 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQ-KTLGLQG 67 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHTTCTT
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCC
Confidence 34578999999999999999999998888777 7777653
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.37 E-value=1.1 Score=33.46 Aligned_cols=47 Identities=23% Similarity=0.391 Sum_probs=34.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeC---CchHHHHHHHhhhcCCc-cccceee
Q 026853 92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWN-ESFSVIV 139 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~l~-~~~~~~~ 139 (232)
+.+++.+.++.|++.|++++++|| .........+ +.+|+. ...+.++
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~-~~~g~~~~~~~~i~ 88 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRF-ARLGFGGLRAEQLF 88 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCCSCCGGGEE
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HhcCCCcCChhhEE
Confidence 457888999999999999999997 4455566666 677775 3344444
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=85.77 E-value=2.5 Score=30.15 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=49.6
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~ 174 (232)
++.+.|..+++.+-++++++-.....--..+.+.+++.-.+-.+.+.++. +....-++.-|++ ++|||+
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~-------~~~i~~l~~~G~~----vVVG~~ 162 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDA-------RGQINELKANGTE----AVVGAG 162 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHH-------HHHHHHHHHTTCC----EEEESH
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHH-------HHHHHHHHHCCCC----EEECCH
Confidence 44555555556667888888765433223343555653222111111111 1222223334655 799988
Q ss_pred hhhhhhhhhcCCEEEEeCC
Q 026853 175 VIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 175 ~~Di~~a~~~G~~~i~v~~ 193 (232)
.. ...|++.|++++.+.+
T Consensus 163 ~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 163 LI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HH-HHHHHHTTSEEEESSC
T ss_pred HH-HHHHHHcCCcEEEECC
Confidence 86 7889999999999974
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.68 E-value=0.3 Score=33.62 Aligned_cols=16 Identities=38% Similarity=0.723 Sum_probs=14.2
Q ss_pred cccEEEEeCCCccccc
Q 026853 8 LMSCVILDLDGTLLNT 23 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~ 23 (232)
..+++++|+|+||+++
T Consensus 14 ~k~~LVLDLD~TLvhs 29 (181)
T 2ght_A 14 DKICVVINLDETLVHS 29 (181)
T ss_dssp TSCEEEECCBTTTEEE
T ss_pred CCeEEEECCCCCeECC
Confidence 4579999999999986
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=85.32 E-value=8.9 Score=27.95 Aligned_cols=94 Identities=10% Similarity=0.157 Sum_probs=62.5
Q ss_pred CCCcHHHHHHHHH---hCCCCEEEEeCCchHHHHHHHhhhcCCccccceeec-ccccCC--CCCCHHHHHHHHHhcCCCC
Q 026853 92 ALPGANRLIKHLS---CHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDEVRT--GKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 92 ~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~-~~~~~~--~kp~~~~~~~~~~~~~~~~ 165 (232)
+.|+..+.++..+ +.|+.+..++..+..... .+ ...|. +.+.. +...+. +-.+++.++.+.+..+++
T Consensus 117 llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~ak-rl-~~~G~----~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP- 189 (265)
T 1wv2_A 117 LFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIAR-QL-AEIGC----IAVMPLAGLIGSGLGICNPYNLRIILEEAKVP- 189 (265)
T ss_dssp CCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHH-HH-HHSCC----SEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC-
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HH-HHhCC----CEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC-
Confidence 4588777765555 459988877777766554 44 44554 22332 222333 345788898888877765
Q ss_pred CcEEEEe---CchhhhhhhhhcCCEEEEeCCCC
Q 026853 166 SSSLVIE---DSVIGVVAGKAAGMEVVAVPSLP 195 (232)
Q Consensus 166 ~~~~~vg---D~~~Di~~a~~~G~~~i~v~~~~ 195 (232)
+.++ .++.|...+-++|...++|+++-
T Consensus 190 ---VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 190 ---VLVDAGVGTASDAAIAMELGCEAVLMNTAI 219 (265)
T ss_dssp ---BEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred ---EEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 3445 44589999999999999999843
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=84.93 E-value=1.8 Score=31.45 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCC---chHHHHHHHhhhcCCccccceee
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNS---HRATIESKISYQHGWNESFSVIV 139 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~~l~~~~~~~~ 139 (232)
+.++..+.++++++.|++++++||+ +.......+ +.+|+...-+.++
T Consensus 34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~-~~lg~~~~~~~ii 83 (271)
T 1vjr_A 34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL-RNMGVDVPDDAVV 83 (271)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH-HHTTCCCCGGGEE
T ss_pred ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHH-HHcCCCCChhhEE
Confidence 4567788999999999999999954 555566666 6677653333343
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=84.52 E-value=1.7 Score=30.85 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=34.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
.+.+...+.+++++++|++++++|+.+.......+ +.+++..
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~-~~l~~~~ 61 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAAS-ILIGTSG 61 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHHTCCS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH-HHcCCCC
Confidence 45577889999999999999999999988887776 6677643
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=84.10 E-value=1.9 Score=31.52 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=32.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+...+.++++++.|+.++++|+.+...+...+ +.+++..
T Consensus 25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 63 (279)
T 3mpo_A 25 QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYL-DAMDIDG 63 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC
Confidence 45567899999999999999999998888777 7777754
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=82.12 E-value=1.2 Score=32.08 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 97 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 97 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
.+.|++|+++|++++++|+.+...+...+ +.+++.
T Consensus 23 ~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~-~~~~~~ 57 (249)
T 2zos_A 23 KPIIEELKDMGFEIIFNSSKTRAEQEYYR-KELEVE 57 (249)
T ss_dssp HHHHHHHHHTTEEEEEBCSSCHHHHHHHH-HHHTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC
Confidence 46788899999999999999988887777 777764
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=81.68 E-value=2.9 Score=30.50 Aligned_cols=40 Identities=15% Similarity=0.117 Sum_probs=33.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~ 132 (232)
+.+...+.|++++++|+.++++|+.+...+...+ +.+++.
T Consensus 23 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 62 (279)
T 4dw8_A 23 ISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLA-NELRMN 62 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTGG
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHhCCC
Confidence 4456778999999999999999999998888777 777764
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=81.07 E-value=1.6 Score=32.06 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=33.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+...+.|++++++|+.++++|+.+...+...+ +.+++..
T Consensus 39 i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~-~~l~~~~ 79 (285)
T 3pgv_A 39 LTPYAKETLKLLTARGINFVFATGRHYIDVGQIR-DNLGIRS 79 (285)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHH-HHHCSCC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCCCc
Confidence 3455678899999999999999999988887777 7778764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 232 | ||||
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 9e-21 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 5e-20 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 1e-19 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 3e-19 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 5e-19 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 5e-18 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 1e-17 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 8e-17 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 1e-16 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 9e-16 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 2e-15 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 5e-15 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 6e-15 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 9e-15 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-14 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 6e-14 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 8e-14 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 1e-13 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 2e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-10 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 5e-10 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 9e-10 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 2e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-04 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 0.001 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 0.001 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 0.002 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 0.002 |
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 84.4 bits (207), Expect = 9e-21
Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 10/188 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVED 65
I DL +++ D F+ VL + +K +G+ + E
Sbjct: 3 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA 60
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
A + + ++ P ++ L G + + SN++R
Sbjct: 61 LCHEMALPLSYEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
++ I S ++ KP I+ + PS ++ +D+ + G
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLG 178
Query: 186 MEVVAVPS 193
+ + V
Sbjct: 179 ITSILVKD 186
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 82.9 bits (203), Expect = 5e-20
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLP 69
I D+DG L++++ ++ + G + R + + +
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 65
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
++ E V V + + + + L R L + +++ + K+
Sbjct: 66 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 125
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M +
Sbjct: 126 DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI 185
Query: 190 AVPSLPKQTH-RYTAADEVINSLLDLRPE 217
VP+ Q R+ A+ ++SL +L +
Sbjct: 186 VVPAPEAQNDPRFVLANVKLSSLTELTAK 214
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 82.5 bits (202), Expect = 1e-19
Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 40/243 (16%)
Query: 12 VILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPL-------- 56
++LD++GT E +K +L + +E + ++ ++ K
Sbjct: 10 ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGA 69
Query: 57 ------------------EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-----KVKAL 93
+ V K + ++ K +
Sbjct: 70 VPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFF 129
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
++ G+ + + S+ + + + V D K +
Sbjct: 130 ADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES 189
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSL 211
+ + A + ++ L + D A + A + V V P T +I S
Sbjct: 190 YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSF 249
Query: 212 LDL 214
+L
Sbjct: 250 SEL 252
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 80.7 bits (197), Expect = 3e-19
Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 6/209 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DG L++++ + ++V L + G E + + + VE
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
+++ + L + + + + S+SHR + +
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KP PDIFL A + + P +V+EDSV G+ +AAGM V+
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184
Query: 192 PS------LPKQTHRYTAADEVINSLLDL 214
A+ VI+ + DL
Sbjct: 185 TGASHTYPSHADRLTDAGAETVISRMQDL 213
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (196), Expect = 5e-19
Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 24/203 (11%)
Query: 12 VILDLDGTLLNTD------------GMFSEVLKTFLVKYGKE------WDGREKHKIVGK 53
DLDG L + + L E G+
Sbjct: 3 AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
E + G ++ +++++S + L G +
Sbjct: 63 LMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQAAIALKKKGFTTCIV 119
Query: 114 SNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+N+ + + S ++ F ++ S +V KP P I+ L +P+ +
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179
Query: 171 IEDSVIGVVAGKAAGMEVVAVPS 193
++D + + GM + V +
Sbjct: 180 LDDFGSNLKPARDMGMVTILVHN 202
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 77.6 bits (189), Expect = 5e-18
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 14/214 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ + E++ + D
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK 63
Query: 71 AKHEFV-------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E N+ Y + PG +L+K L + + +ALAS S
Sbjct: 64 VSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF-- 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ + F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K
Sbjct: 122 -LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217
+G + V ++ E
Sbjct: 181 SGALPIGVGR----PEDLGDDIVIVPDTSHYTLE 210
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.8 bits (187), Expect = 1e-17
Identities = 34/206 (16%), Positives = 58/206 (28%), Gaps = 24/206 (11%)
Query: 9 MSCVILDLDGTLLNTD------------GMFSEVLKTFLVKYGKEWD------GREKHKI 50
+ + DLDG L + +L K G E G
Sbjct: 2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
E E + K+ + E+ F + K + L G
Sbjct: 62 WIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPMLQAALMLRKKGFTT 118
Query: 111 ALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167
A+ +N+ + F ++ S +V KP P I+ L PS
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178
Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193
+ ++D + + GM + V
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQD 204
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 74.8 bits (182), Expect = 8e-17
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ VI GT ++ EV K G E K +G ++ + E
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61
Query: 68 LPCAKHEFVNEVYSMFSDHLC--------------KVKALPGANRLIKHLSCHGVPMALA 113
+ + ++ + + G +I L G+ +
Sbjct: 62 IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIE 172
+ R ++ +V D+V G+P P + + A L + + +
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 181
Query: 173 DSVIGVVAGKAAGMEVVAV 191
D+V + G+ AGM V V
Sbjct: 182 DTVSDMKEGRNAGMWTVGV 200
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 72.8 bits (177), Expect = 1e-16
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 10/183 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
I DL GTLL+ + L YG D ++ + +
Sbjct: 5 DYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF------AIETFAP 58
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F+ + + L G + L++ +S G L S+ + +E
Sbjct: 59 NLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIA 118
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ V S R P+ L ++ + LVI D I + AG+AAG++
Sbjct: 119 AYFTEVVTSSSGFKRKPN--PESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHL 174
Query: 191 VPS 193
S
Sbjct: 175 FTS 177
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 71.5 bits (173), Expect = 9e-16
Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 11/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKT------PLEEAAII 62
+ DL GTL + + + F + W ++ ++ ++A
Sbjct: 5 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 64
Query: 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
+ + S D ++ ++ L G+ +A+ SN +I+
Sbjct: 65 ALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID 124
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ G + F ++ D V+ KP ++ A + L ++ S+ L + + +
Sbjct: 125 -AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 183
Query: 183 AAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 214
G + D + SL +
Sbjct: 184 YFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.6 bits (171), Expect = 2e-15
Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 19/223 (8%)
Query: 10 SCVILDLDGTLLNT----DGMFS---EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-- 60
S +LD++GT+ + +F + + + ++ E+
Sbjct: 4 STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63
Query: 61 ---IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
++ +D P K + K A IK + + + +
Sbjct: 64 ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123
Query: 118 RATIE------SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + N + K + + + + S L +
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFL 182
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + + A G+ +V + L
Sbjct: 183 SDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 69.1 bits (167), Expect = 5e-15
Identities = 30/207 (14%), Positives = 73/207 (35%), Gaps = 9/207 (4%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP 69
+ I DLDGTLL++ ++ ++ +D + + + K +++ + V +
Sbjct: 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL 61
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
+ ++ +V +PGA ++ G+ + ++
Sbjct: 62 DVEV-LNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGV 120
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+ + S VR KPSP+ + + ++ I D + V + +G++ +
Sbjct: 121 ESYFTEILTSQSGFVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 178
Query: 190 AVPSLPKQTHRYTAADEVINSLLDLRP 216
+ I +L D+
Sbjct: 179 NF------LESTYEGNHRIQALADISR 199
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 68.8 bits (166), Expect = 6e-15
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 5/204 (2%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
++ D+DGTL N+ ++ V++ L YGK + + K + E
Sbjct: 5 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAAS 61
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F + + + H +++ PG L + L S R +
Sbjct: 62 EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYP 119
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 120 FMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179
Query: 191 VPSLPKQTHRYTAADEVINSLLDL 214
+ LD+
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 69.0 bits (167), Expect = 9e-15
Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 15/225 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG---- 67
V+ D GTL + + + + G+ + K + + L D+
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYP-GRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 68 --LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
L E F + + P + + A+ SN ++
Sbjct: 64 EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ- 122
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ G +SF ++ D R KP PD + + L + P+ L + + V K
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKN 182
Query: 184 AGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
G V V +L ++ T A + L +R E + P
Sbjct: 183 FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 68.7 bits (167), Expect = 3e-14
Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)
Query: 43 DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 102
+ + + +E + + Y K + + ++ + L+
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 149
L G + +A+ G F I + +V KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 150 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
+P ++ A N + ++ DS+ +++ + G + +
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345
Query: 196 KQTH-----RYTAADEVINSLLDLR 215
K AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 66.5 bits (160), Expect = 6e-14
Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 12/215 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+ DLDGTL+N+ + + + L + + D+
Sbjct: 6 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 65
Query: 71 AKHEFVNEVYSMFS---------DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
A+ E + + F + + P ++ L G +A+ +N +
Sbjct: 66 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 125
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
+ + G + FS ++G + KP P F + + P L + DS + A
Sbjct: 126 QPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAA 184
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+AG VV + + D + + D+
Sbjct: 185 HSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 66.0 bits (159), Expect = 8e-14
Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 15/221 (6%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 2 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 58
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
GL A+ + ++ + + L G L+ LS + +
Sbjct: 59 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNMEPSSSLVIEDSV 175
G + F +D+ P I LE N PS ++I D+
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTE 178
Query: 176 IGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+ + +AV + + + + +
Sbjct: 179 HDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.5 bits (156), Expect = 1e-13
Identities = 26/217 (11%), Positives = 54/217 (24%), Gaps = 53/217 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W V+
Sbjct: 1 MTRLPKLAVFDLDYTL---------------------WPF-----------------WVD 22
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ P V + ++ P ++ L GVP+A AS + ++
Sbjct: 23 THVDPPFHKSSDGTVRDRRGQN---IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQ 79
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F F + + S + +D ++
Sbjct: 80 LLELFDLGKYFIQREIYP-----GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRL 134
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221
G+ + + + + L + GL
Sbjct: 135 GVTCIHIR------DGMS-LQTLTQGLETFAKAQAGL 164
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 56.0 bits (133), Expect = 2e-10
Identities = 24/208 (11%), Positives = 66/208 (31%), Gaps = 8/208 (3%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
++ + DLDGTL+++ + G + + PLE +
Sbjct: 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQ 63
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ Y + ++ ++I L L + + T ++ +
Sbjct: 64 ISEAVQIYRSYYKAKGIYEAQLF-----PQIIDLLEELSSSYPLYITTTKDTSTAQDMAK 118
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+ D+ +A + + P +++I D+ ++ + G++
Sbjct: 119 NLEIH-HFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDL 214
+A+ + D + + L++
Sbjct: 178 LAITWGFGEQADLLNYQPDYIAHKPLEV 205
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 56.1 bits (134), Expect = 3e-10
Identities = 32/217 (14%), Positives = 59/217 (27%), Gaps = 26/217 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DGT+ D ++KTF EW + + ++E +
Sbjct: 7 IICDFDGTITMND-NIINIMKTFA---PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSL 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E + V K G + ++ H +P + S +
Sbjct: 63 KEEITSFVLE-------DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVE 114
Query: 132 NESF---SVIVGSDEVRT----------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +D + L+ ++I DSV V
Sbjct: 115 KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDV 174
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215
A K + + A L + ++R
Sbjct: 175 EAAKLSDL-CFARDYLLNECREQNLNHLPYQDFYEIR 210
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.6 bits (132), Expect = 5e-10
Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------- 61
V DLD TL++T G + + ++ +E+ +I+ + +
Sbjct: 8 AVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTC 67
Query: 62 -----------IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVP 109
+++ + E Y ++ + + ++ L V
Sbjct: 68 ITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VR 126
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ L +N R T KI F IV E + KP+P IF L ++P +
Sbjct: 127 LLLLTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185
Query: 170 VIEDSVI-GVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
++ D++ + G AG++ S +++S+L+L
Sbjct: 186 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 54.9 bits (130), Expect = 9e-10
Identities = 26/222 (11%), Positives = 64/222 (28%), Gaps = 17/222 (7%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---------------EWDGREKHKIVGK 53
+ V D GTLL+ +G LK G + +
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMAL 112
P+ + V ++ + + + + P ++K L + +
Sbjct: 62 RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGK-YHVGM 120
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
++S + + + + S+ + L K + V +
Sbjct: 121 ITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGD 180
Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ V K GM + + ++ + D +++ L ++
Sbjct: 181 NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 42.5 bits (98), Expect = 1e-05
Identities = 38/216 (17%), Positives = 67/216 (31%), Gaps = 31/216 (14%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL ++ D D TL+N +E + + G E + ++ K + L + +
Sbjct: 4 KKL---ILFDFDSTLVN-----NETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKR 55
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
L E GA IK L G +A+ S +
Sbjct: 56 VSLLKDLPIEKVEKAIKRITPTE------GAEETIKELKNRGYVVAVVSGGFDIAVNKIK 109
Query: 126 SYQHGWNESFSVIVGSDEVRT---------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176
+ ++ D T +I + AK + ++ + D
Sbjct: 110 EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAN 169
Query: 177 GVVAGKAAGMEVV--AVPSLPKQTHRYTAADEVINS 210
+ K AG+++ A P L + AD I
Sbjct: 170 DISMFKKAGLKIAFCAKPILKE------KADICIEK 199
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 41.4 bits (96), Expect = 2e-05
Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)
Query: 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 122
D K+ PG + L G + + +N
Sbjct: 19 SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ +DE KP + M+ ++S VI D + +
Sbjct: 79 FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138
Query: 183 AAGMEVVAV 191
G+ +
Sbjct: 139 NMGINGLRY 147
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 3e-04
Identities = 37/225 (16%), Positives = 63/225 (28%), Gaps = 25/225 (11%)
Query: 4 PLKKLMS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
L+KL V D+D T++ E + G E E + + A
Sbjct: 2 ELRKLFYSADAVCFDVDSTVIR-----EEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA 56
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ E L E V + + HL PG L+ L V + L S R+
Sbjct: 57 ALTERLALIQPSREQVQRLIAEQPPHLT-----PGIRELVSRLQERNVQVFLISGGFRSI 111
Query: 121 I----------ESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + + G DE T + + + +
Sbjct: 112 VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKII 171
Query: 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I D + A A + + A I ++L
Sbjct: 172 MIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 37.0 bits (84), Expect = 0.001
Identities = 26/248 (10%), Positives = 59/248 (23%), Gaps = 44/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
++DLDGT+ + + +
Sbjct: 4 GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 63
Query: 48 HKIVGKTPLEEAAIIVEDYG----------------LPCAKHEFVNEVYSMFSDHLCKVK 91
+ T +++ + A E+ L
Sbjct: 64 PASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTEL 123
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
+ + + + + + T + + V GKP
Sbjct: 124 SYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKA 183
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS---LPKQTHRYTA-ADE 206
I A L +E +++ D+ + +G G++ + V S
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243
Query: 207 VINSLLDL 214
V++SL +
Sbjct: 244 VVDSLDEW 251
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 36.6 bits (83), Expect = 0.001
Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 45/248 (18%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGR 45
+ VI D+DG L++ + + L
Sbjct: 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62
Query: 46 EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALP-----GANRLI 100
+ + + A + G ++ ++ P G R
Sbjct: 63 VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122
Query: 101 KHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIF 154
H +A+ + + I G GKPSP I
Sbjct: 123 NWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182
Query: 155 LEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS-------LPKQTHRYTAADE 206
A ++ ++++ D++ ++AG AG+E + V S + R
Sbjct: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR---PSW 239
Query: 207 VINSLLDL 214
+ S+ ++
Sbjct: 240 IYPSVAEI 247
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 36.1 bits (82), Expect = 0.002
Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 61 IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
I D P E V + + V + + + + A+
Sbjct: 33 TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92
Query: 116 SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + ++E+ + + KP+P + +EA KRL ++ SL++
Sbjct: 93 VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D + + AGK AG+ + I L D
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 36.2 bits (82), Expect = 0.002
Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 44/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
++DLDGT+ + + +
Sbjct: 4 GYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKT 63
Query: 48 HKIVGKTPLEEAA---------IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKAL 93
T G K Y S++ + L
Sbjct: 64 PLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDTNL 123
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDEVRTGKPSP 151
+ L+ + + +N + + GKP
Sbjct: 124 TYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEA 183
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAA----DE 206
I +A RL ++ ++++ D+ + AG + + V + + A D
Sbjct: 184 VIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDF 243
Query: 207 VINSLLDL 214
V++SL +
Sbjct: 244 VLSSLAEW 251
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 232 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 100.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 100.0 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 100.0 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 100.0 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 100.0 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 100.0 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 100.0 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 100.0 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.97 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.96 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.94 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.93 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.93 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.91 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.88 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.88 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.87 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.87 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.87 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.87 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.85 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.85 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.84 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.83 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.78 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.77 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.71 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.64 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.63 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.62 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.6 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.58 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.55 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.47 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.45 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.39 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.34 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.3 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.29 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.25 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.18 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 99.1 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.08 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.06 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.02 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.99 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.95 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.69 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 98.0 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.82 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.65 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.06 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.63 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.09 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 94.44 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 92.7 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.31 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 90.9 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 89.04 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 88.34 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 88.32 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 88.19 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 87.97 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 87.74 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.02 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 84.22 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 82.36 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 81.51 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=1.3e-37 Score=223.55 Aligned_cols=205 Identities=20% Similarity=0.340 Sum_probs=176.9
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHHh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (232)
|++|+|+||+||||+|+...+.+++..+++++|.+..........+...... +...+.. ...+.+...+.+.+.+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQA----MTELGIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHH----HHHTTCCGGGHHHHHHHHHHHHTT
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhh----hhccccchhhHHHHHHHhhhhhcc
Confidence 4689999999999999999999999999999999888888777777665433 3344443 3344555566666666
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCC
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 165 (232)
.....+++||+.++|+.|++ +++++++||+....+...+ +++++..+|+.++++++....||+|.++..+++++|++|
T Consensus 77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cccccccccchhhhhhhhcc-ccccccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 67788899999999999975 5899999999999999999 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcc
Q 026853 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 166 ~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~ 217 (232)
+++++|||+.+|+.+|+++|+.++++.+|.........+++++++++|++++
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 9999999999999999999999999998877777767788999999998764
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.8e-36 Score=218.24 Aligned_cols=208 Identities=23% Similarity=0.369 Sum_probs=171.5
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcc-hhhhhcCCChHHHHHHHHHHcCCC-ccHHhHHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (232)
++|++++||+||||+|+.+.+..++.+++++++++.+.. .+....+................. .............+.
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI 80 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHH
Confidence 368999999999999998888899999999999876654 345566666666665555554433 233344444433333
Q ss_pred hhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 85 ~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
+.. ...+++||+.++|+.|++.|++++|+||++...+...+ +.+|+..+|+.++++++.+..||+|..|..+++++|+
T Consensus 81 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~ 159 (218)
T d1te2a_ 81 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV 159 (218)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred HhhhccccccchHHHHHHHhhhcccccccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence 322 35678999999999999999999999999999999888 9999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHhhhhccCcC
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~~~~l~el~ 215 (232)
+|+++++|||+.+|+.+|+++|+.+++|+.+...... ...|+++++|+.||.
T Consensus 160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred CchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 9999999999999999999999999999885544443 578899999999985
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=4.7e-35 Score=212.51 Aligned_cols=211 Identities=17% Similarity=0.214 Sum_probs=168.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcc-hhhhhcCCChHHHHHHHH----HHcCCCccHHhHHH---H
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIV----EDYGLPCAKHEFVN---E 78 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~ 78 (232)
.++|+|+||+||||+|+...+..++.++++++|.+.... .+....+........... .............. .
T Consensus 2 ~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (224)
T d2hsza1 2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ 81 (224)
T ss_dssp SSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHH
Confidence 479999999999999999989999999999999765544 355555555544333322 22222222222111 1
Q ss_pred HHHHHH-hhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHH
Q 026853 79 VYSMFS-DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (232)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~ 157 (232)
...... .......++|++.++|..|++.|++++++||.....+...+ +.+|+..+|+.++++++.+..||+|..+..+
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~ 160 (224)
T d2hsza1 82 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYL 160 (224)
T ss_dssp HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHHH
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHHH
Confidence 111122 22346779999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccc
Q 026853 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l 218 (232)
+++++++++++++|||+.+|+.+|+++|+.+++|.+|...... ...|++++++++||.+++
T Consensus 161 ~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 161 CGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 9999999999999999999999999999999999987654433 567899999999998765
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.9e-34 Score=205.51 Aligned_cols=199 Identities=17% Similarity=0.234 Sum_probs=159.7
Q ss_pred cEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhh-hcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhhhc
Q 026853 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (232)
Q Consensus 10 k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (232)
++++||+||||+|+...+..++.++++++|.+.+.+.... ..+......+..+....+.. .+.+.........+...
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 79 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNA 79 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTCGG
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh--HHHHHHHHHHHHHhhcc
Confidence 6899999999999998888999999999998877665543 33455556666666655543 33333333444444456
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
...++||+.++|+.|+++|++++|+||.... ....+ +++|+..+|+.++++++....||+|.+|+.++++++++|++|
T Consensus 80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 157 (204)
T d2go7a1 80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 157 (204)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred cCcccchHHhhhhcccccccchhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceE
Confidence 7789999999999999999999999998764 45677 889999999999999999999999999999999999999999
Q ss_pred EEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccc
Q 026853 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l 218 (232)
+||||+.+|+.+|+++|+.++++..+.. .+++.++++.|+..++
T Consensus 158 l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 158 YYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADISRIF 201 (204)
T ss_dssp EEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHHHHHT
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHHHHHh
Confidence 9999999999999999999999987532 2445556666654443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=4.4e-34 Score=211.62 Aligned_cols=212 Identities=18% Similarity=0.218 Sum_probs=165.3
Q ss_pred cccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHH----------HcCCCcc---HH
Q 026853 8 LMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE----------DYGLPCA---KH 73 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~~ 73 (232)
++|+|+||+||||+|+... ...++.+++++++...+.+.++...+.........+.. .++.... ..
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 80 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence 5899999999999998543 35677888899998888888777777655443332221 2222222 22
Q ss_pred hHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccc-ceeecccccCCCCCCH
Q 026853 74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP 151 (232)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~~~kp~~ 151 (232)
.....+.+.+.+.. ....++||+.++|+.|+++|++++++||.+...+...+ +++|+..+| |.++++++....||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p 159 (257)
T d1swva_ 81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYP 159 (257)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHH-HHHhhcccccccccccccccccccCh
Confidence 23333444444333 35679999999999999999999999999999999899 888999887 7888999999999999
Q ss_pred HHHHHHHHhcCCC-CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccc-------------------------cchhhh
Q 026853 152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-------------------------RYTAAD 205 (232)
Q Consensus 152 ~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-------------------------~~~~~~ 205 (232)
..|..+++++|+. +++|+||||+.+|+.+|+++|+.+|+|.+|..... ...+|+
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999995 58999999999999999999999999999754211 123489
Q ss_pred HhhhhccCcCccccC
Q 026853 206 EVINSLLDLRPEKWG 220 (232)
Q Consensus 206 ~~~~~l~el~~~l~~ 220 (232)
++++++.||.+.|..
T Consensus 240 ~vi~~l~eL~~ii~~ 254 (257)
T d1swva_ 240 FTIETMQELESVMEH 254 (257)
T ss_dssp EEESSGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 999999999877653
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.7e-33 Score=202.37 Aligned_cols=204 Identities=15% Similarity=0.222 Sum_probs=162.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCC-cchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
.++|+|+||+||||+|+...+..++..+++++|.+.. .+.++...+......+...+. ..........+...+..
T Consensus 2 ~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 77 (210)
T d2ah5a1 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLS----KDQISEAVQIYRSYYKA 77 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSC----GGGHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhcccccc----chhhHHHHHHHHHHHHh
Confidence 4689999999999999998889999999999987543 445566666665554433221 12233333333333333
Q ss_pred h-hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 86 H-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 86 ~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
. .....+++++.++++.++.. ++++++||++....+..+ +++|+..+|+.++++++. ++|+|..+..+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~~ 153 (210)
T d2ah5a1 78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLA 153 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTCC
T ss_pred hhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhcc
Confidence 2 34678899999999999877 589999999999999998 999999999999988774 578889999999999999
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccc
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l 218 (232)
|+++++|||+.+|+.+|+++|+++++|.+|....+. ...|+++++++.|++..+
T Consensus 154 ~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 154 PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred cccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 999999999999999999999999999986544443 456899999999987754
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=1.2e-32 Score=199.47 Aligned_cols=204 Identities=23% Similarity=0.315 Sum_probs=159.9
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hhhcCCChHHHHHHHHHHcCCCccHHhH---HHHHHHHH
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMF 83 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 83 (232)
|+|+|+||+||||+|+...+.+++..++..++........ ....+.........+....+.....+.. .....+.+
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 6899999999999999888889999999999987665554 4455667777777777666555444333 33333344
Q ss_pred Hhhh---ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHh
Q 026853 84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (232)
Q Consensus 84 ~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 160 (232)
.+.. ....++||+.++|+.|++.|++++++|++.. ....+ +..++..+|+.++++++.+.+||+|+.|+.++++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~ 157 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHH
T ss_pred cccccccccccccCCceeccccccccccceEEEeecch--hhHHH-HhhccccccccccccccccccccChHHHHHHHHH
Confidence 3332 2456899999999999999999999999754 45567 8889999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcc----ccchhhhHhhhhccCc
Q 026853 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT----HRYTAADEVINSLLDL 214 (232)
Q Consensus 161 ~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~----~~~~~~~~~~~~l~el 214 (232)
+|++|++|+||||+.+|+.+|+++|+.+|+|++++... .....+++.++++.|+
T Consensus 158 ~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el 215 (221)
T d1o08a_ 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEV 215 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHH
T ss_pred cCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHH
Confidence 99999999999999999999999999999998843221 1234445555555554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5e-33 Score=201.56 Aligned_cols=207 Identities=23% Similarity=0.347 Sum_probs=169.5
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchh-hhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHh-h
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H 86 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (232)
+|+|+||+||||+|+...+..++..+++++|.+.+.+.+ ....+.........+....+....... ...+...+.. .
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASL-LDKSEKLLDMRL 80 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHH-HHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccc-hhHHHHHHHHHh
Confidence 689999999999999998999999999999998876665 456678888888888888887755433 3344433333 3
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-cc--cCCCCCCHHHHHHHHHhcCC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DE--VRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-~~--~~~~kp~~~~~~~~~~~~~~ 163 (232)
.....+.||+.++|++|+. +.+++|+.....+...+ +++++..+|+.++++ ++ ....||+|..|..+++++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~ 156 (222)
T d2fdra1 81 ERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV 156 (222)
T ss_dssp HHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred hhccchhhhHHHHhhhccc---cceeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhCC
Confidence 3567899999999988864 56899999999999888 999999999876544 32 46789999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc------chhhhHhhhhccCcCccccC
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR------YTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~------~~~~~~~~~~l~el~~~l~~ 220 (232)
+|+++++|||+..|+.+|+++|+.+++|.++...... ..+|+++++|++||..+|..
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~ 219 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 219 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999986543222 34689999999999877754
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.5e-32 Score=191.93 Aligned_cols=177 Identities=22% Similarity=0.257 Sum_probs=148.0
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHHhh
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (232)
|++|+|+||+||||+|+...+..++.++++++|...+........+......++ .+... .+.....+.+.....
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~ 74 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIE----TFAPN--LENFLEKYKENEARE 74 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHH----HHCTT--CTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhh----hhhHH--HHHHHHHHHHHHHHH
Confidence 468999999999999998888999999999999988777776666655444333 33222 233445555555555
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 166 (232)
.....++||+.++|+.|++.|++++++||...... ..+ +++++..+|+.++++++....||+|..|+.+++++++ +
T Consensus 75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~ 150 (187)
T d2fi1a1 75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--S 150 (187)
T ss_dssp TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--S
T ss_pred hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--C
Confidence 66788999999999999999999999999877655 467 8899999999999999999999999999999999986 4
Q ss_pred cEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 167 SSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 167 ~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++++|||+.+|+.+|+++|++++++.+
T Consensus 151 ~~l~vgDs~~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 151 SGLVIGDRPIDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred CeEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 599999999999999999999999987
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=2.9e-33 Score=203.89 Aligned_cols=207 Identities=19% Similarity=0.247 Sum_probs=153.0
Q ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCC-CCCcchhh------------hhcC---CChH----HHHHHHHHHcC
Q 026853 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKH------------KIVG---KTPL----EEAAIIVEDYG 67 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------~~~~---~~~~----~~~~~~~~~~~ 67 (232)
|+|+|+||+||||+++......+...+.+.++. ..+..... ...+ .... ..+..+..+.+
T Consensus 1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T d1x42a1 1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG 80 (230)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 589999999999999877666555555444432 12222111 0111 1111 12233333444
Q ss_pred CCccHHhHHHHHHHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCC
Q 026853 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (232)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 147 (232)
.... +.....+.... .....++||+.++|+.|++ |++++++||+....+...+ +.+|+..+|+.++++++.+..
T Consensus 81 ~~~~-~~~~~~~~~~~---~~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~ 154 (230)
T d1x42a1 81 FKYP-ENFWEIHLRMH---QRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFF 154 (230)
T ss_dssp CCCC-TTHHHHHHHHH---HHHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBC
T ss_pred hchH-HHHHHHHHHHH---HhhCcccccHHHHHHHhhc-cCceeeeeccccccchhhh-ccccccccccccccccccccc
Confidence 3321 11111221111 1235789999999999975 6999999999999999888 889999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCccccC
Q 026853 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 148 kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
||+|++|+.+++++|++|+++++|||+. +|+.+|+++|+.+++++++.........++++++|++|+.+.+..
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 228 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE 228 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHH
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHH
Confidence 9999999999999999999999999996 899999999999999998666666677899999999999877653
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=3.1e-33 Score=203.46 Aligned_cols=210 Identities=21% Similarity=0.291 Sum_probs=159.6
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHc-CCCCCcchhhhhcCCChHHHHHHHHHHcCCCccH-Hh----HHHHHHHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKY-GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK-HE----FVNEVYSM 82 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~ 82 (232)
.|+|+||+||||+++...+..++..++.+. +....... ....+.........+++..+..... .+ ....+...
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS-HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH-HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 478999999999999888888887776654 43322222 2334455555566666666655221 11 11122222
Q ss_pred HHhhh--ccCCCCCcHHHHHHHHHhCC-CCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 83 FSDHL--CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 83 ~~~~~--~~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
+.+.. ....++||+.++|++|++.| ++++++||+....+...+ +.+|+..+|+.++++++....||+|..+...+.
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~ 159 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERAR 159 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHH
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHHhh
Confidence 32222 34578999999999999986 899999999999999999 899999999999999999999999988776665
Q ss_pred hc---CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc--chhhhHhhhhccCcCccccC
Q 026853 160 RL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 160 ~~---~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~l~el~~~l~~ 220 (232)
.+ +++|++++||||+.+|+.+|+.+|+.+++|.+|....+. ...|++++++++|+.+.+..
T Consensus 160 ~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~ 225 (228)
T d2hcfa1 160 RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS 225 (228)
T ss_dssp HHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred hhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHH
Confidence 55 899999999999999999999999999999987655543 45789999999999887654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.4e-33 Score=203.81 Aligned_cols=215 Identities=19% Similarity=0.262 Sum_probs=155.1
Q ss_pred ccccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh---------h-------hcCCChH----HHHHHHHH
Q 026853 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH---------K-------IVGKTPL----EEAAIIVE 64 (232)
Q Consensus 5 ~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~~~----~~~~~~~~ 64 (232)
.+.+||+|+||+||||+++......++..+++.++......... . ....... ..+...+.
T Consensus 2 ~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
T d2gfha1 2 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ 81 (247)
T ss_dssp ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 35689999999999999988777777766665443221111100 0 0001111 11222233
Q ss_pred HcCCCccHHhHHHHHHHHH-HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccc
Q 026853 65 DYGLPCAKHEFVNEVYSMF-SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (232)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 143 (232)
..........+.......+ ........++|++.++|+.|++ |++++++||++...+...+ ++.|+..+|+.++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~~ 159 (247)
T d2gfha1 82 ETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGE 159 (247)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGG
T ss_pred HhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhh-hhccccccccccccccc
Confidence 3333333333333333333 2233567899999999999985 7899999999999888888 88999999999999999
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEE-EeCCCC-CccccchhhhHhhhhccCcCccccC
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVV-AVPSLP-KQTHRYTAADEVINSLLDLRPEKWG 220 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i-~v~~~~-~~~~~~~~~~~~~~~l~el~~~l~~ 220 (232)
.+..||+|++|+.+++++|++|+++++|||+. +|+.+|+++|+.++ +++... ........|+++++++.||.++|..
T Consensus 160 ~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~ 239 (247)
T d2gfha1 160 QKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQS 239 (247)
T ss_dssp SSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHH
T ss_pred cccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999997 89999999999855 454432 2333357789999999999888775
Q ss_pred C
Q 026853 221 L 221 (232)
Q Consensus 221 ~ 221 (232)
+
T Consensus 240 i 240 (247)
T d2gfha1 240 I 240 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.97 E-value=1.1e-30 Score=188.91 Aligned_cols=129 Identities=16% Similarity=0.241 Sum_probs=117.1
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
....+++++.++++.+++.|++++++||+........+ ...++..+||.++++++.+..||+|..|+.+++++|++|++
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 45678999999999999999999999999999888888 88899999999999999999999999999999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCCC-CCccccchhhhHhhhhccCcCcc
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVINSLLDLRPE 217 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~~~l~el~~~ 217 (232)
|+||||+.+|+.+|+++|+++++|+++ .........|+++++|+.||+++
T Consensus 169 ~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 169 ILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp EEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred EEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 999999999999999999999999874 33344456689999999998764
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.96 E-value=2.9e-30 Score=189.53 Aligned_cols=135 Identities=23% Similarity=0.345 Sum_probs=116.1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+...+....++|++.+.|++|+ ++.++++|++....+...+ +..++..+||.++++++.+..||+|++|..+++++|
T Consensus 85 l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg 161 (245)
T d1qq5a_ 85 MAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG 161 (245)
T ss_dssp HHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHC
T ss_pred HHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHhC
Confidence 3344456789999999999986 4689999999999888888 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc------------------------cccchhhhHhhhhccCcCccc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THRYTAADEVINSLLDLRPEK 218 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~~~~~~~~~~~l~el~~~l 218 (232)
++|++|+||||+.+|+.+|+++|+++++|++.... ......||++++++.||.+++
T Consensus 162 ~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv 241 (245)
T d1qq5a_ 162 VTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (245)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred CChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHH
Confidence 99999999999999999999999999999873211 111345889999999998877
Q ss_pred cC
Q 026853 219 WG 220 (232)
Q Consensus 219 ~~ 220 (232)
.+
T Consensus 242 ~~ 243 (245)
T d1qq5a_ 242 RG 243 (245)
T ss_dssp HH
T ss_pred Hh
Confidence 65
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.6e-29 Score=182.32 Aligned_cols=130 Identities=12% Similarity=0.103 Sum_probs=111.1
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-cccCCCCCCHHHHHHHHHhcC
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-~~~~~~kp~~~~~~~~~~~~~ 162 (232)
........++||+.+++++|+++|++++++||+........+ +..++..+++..... +.....||+|.+|..+++++|
T Consensus 120 ~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~ 198 (253)
T d1zs9a1 120 TAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIG 198 (253)
T ss_dssp HTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHT
T ss_pred HhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhC
Confidence 334456778999999999999999999999999999888787 888988888765443 556679999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC-CCcccc-chhhhHhhhhccCc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHR-YTAADEVINSLLDL 214 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~-~~~~~~-~~~~~~~~~~l~el 214 (232)
++|++|+||||+.+|+.+|+++|+++++|+++ +..... ...++.+++|++||
T Consensus 199 ~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 199 CSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp SCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 99999999999999999999999999999874 332222 56778889999987
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=4.6e-26 Score=164.68 Aligned_cols=202 Identities=12% Similarity=0.070 Sum_probs=126.0
Q ss_pred cccEEEEeCCCcccccHH-------HHHHHHHHHHHHcCCCCCcchh-hhhcCCChHHHHHHHHHHcCCCc---cHHhHH
Q 026853 8 LMSCVILDLDGTLLNTDG-------MFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPC---AKHEFV 76 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 76 (232)
++++|+||+||||+|+.. .+.+.+.+.+.+.......... ..............+........ ....+.
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 81 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 689999999999999742 1233344444444333222222 22333333333333322221111 111111
Q ss_pred HHH-HHHHHhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHH----------hhhcCCccccceeecccccC
Q 026853 77 NEV-YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI----------SYQHGWNESFSVIVGSDEVR 145 (232)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l----------~~~~~l~~~~~~~~~~~~~~ 145 (232)
... ...+........+.+++.+++.. +..+++.++.......... .+..++..+|+.+++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~ 157 (225)
T d2g80a1 82 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG 157 (225)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC
T ss_pred HHHHHHHHHhhcccccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC
Confidence 111 11122222234456666665543 3577888887665443222 14567888999998886554
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCc
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el 214 (232)
.||+|.+|..+++++|++|++|+||||+.+|+.+|+++|+++++|++....+.....+..++++++||
T Consensus 158 -~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 158 -KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp -CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 79999999999999999999999999999999999999999999997444444445666678888875
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.3e-26 Score=167.35 Aligned_cols=105 Identities=18% Similarity=0.188 Sum_probs=92.9
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHH----HHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCC
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATI----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~----~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 163 (232)
....++|++.+++..|+++|++++++||...... .... ...++..+||.++++++.+..||+|++|+.+++.+|+
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~-~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~ 174 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQ-LMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 174 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHH-HHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHh-hhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence 4567899999999999999999999998754432 2222 4456888999999999999999999999999999999
Q ss_pred CCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 164 ~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
+|++++||||+..|+.+|+++|+++|+|.+
T Consensus 175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 175 SPSEVVFLDDIGANLKPARDLGMVTILVQD 204 (225)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred CccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999987
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=5.3e-27 Score=169.48 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=94.5
Q ss_pred hccCCCCCcHHHHHHHHHhCCCCEEEEeCCch----HHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 87 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~----~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
.....++|++.++|.+|+++|++++++|++.. ......+ ...++..+||.++++++++..||+|++|+.++++++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 34567899999999999999999999998532 2233344 667899999999999999999999999999999999
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
++|++|+||||+.+|+.+|+.+|+.+++|.+
T Consensus 172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~ 202 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHN 202 (222)
T ss_dssp SCTTSEEEEESSSTTTHHHHHHTCEEEECCS
T ss_pred CCcceEEEEECCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999987
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=1.2e-25 Score=154.62 Aligned_cols=105 Identities=12% Similarity=0.128 Sum_probs=91.3
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH-HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.+.++||+.++|+.|+++|++++++|++.... ....+ +.+++..+|+.+.. ..||+|..+..+++++|++|++
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l-~~~~~~~~~~~~~~-----~~kp~~~~~~~~~~~~~~~~~~ 117 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLL-ELFDLGKYFIQREI-----YPGSKVTHFERLHHKTGVPFSQ 117 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHTTCGGGCSEEEE-----SSSCHHHHHHHHHHHHCCCGGG
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccch-hcccccccceeeec-----ccCCChHHHHHHHHHhCCChHH
Confidence 46899999999999999999999999886654 44445 88888888887653 3679999999999999999999
Q ss_pred EEEEeCchhhhhhhhhcCCEEEEeCCCCCccc
Q 026853 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH 199 (232)
Q Consensus 168 ~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~ 199 (232)
++||||+..|+.+|+++|+.+|+|.+|.....
T Consensus 118 ~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~ 149 (164)
T d1u7pa_ 118 MVFFDDENRNIIDVGRLGVTCIHIRDGMSLQT 149 (164)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSCCCHHH
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999999999999999998764444
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3.8e-25 Score=156.25 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=95.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEE
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 169 (232)
..+.+++.+++..++..|+.++++||+........+....++..+|+.++++++.+..||+|++|+.+++++|++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 56889999999999999999999999987776666623347889999999999999999999999999999999999999
Q ss_pred EEeCchhhhhhhhhcCCEEEEeCC
Q 026853 170 VIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 170 ~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
||||+.+|+.+|+++|+++++|+.
T Consensus 163 ~vgDs~~di~~A~~aG~~ti~v~~ 186 (197)
T d2b0ca1 163 FFDDNADNIEGANQLGITSILVKD 186 (197)
T ss_dssp EEESCHHHHHHHHTTTCEEEECCS
T ss_pred EEeCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999987
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.8e-22 Score=144.82 Aligned_cols=192 Identities=14% Similarity=0.140 Sum_probs=115.6
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhh--hcC-CChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK--IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
...++|+||+||||++++. +..++..+|.......+.. ..+ ....+.+......+.. ...+. .+..
T Consensus 8 ~~~~aV~FD~DGTLi~~e~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~----~~~~ 76 (217)
T d1nnla_ 8 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SREQV----QRLI 76 (217)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHHHH----HHHH
T ss_pred CCCCEEEEcCccccCCccH-----HHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhccc--chHHH----HHHH
Confidence 3568999999999998753 3445555665432222211 111 1222222222222211 11111 1111
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccc--cc----eeecccccC--------CCCC
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--FS----VIVGSDEVR--------TGKP 149 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~--~~----~~~~~~~~~--------~~kp 149 (232)
.+ ....++||+.+++++|+++|++++|+|++....++..+ +.+|+..+ +. ....+...+ ....
T Consensus 77 ~~--~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~-~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~ 153 (217)
T d1nnla_ 77 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 153 (217)
T ss_dssp HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred Hh--hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHH-HHhCCcccceeeeeeeeeehhccccceeeeeeeccch
Confidence 11 34678999999999999999999999999999999888 88998642 11 010111111 1122
Q ss_pred CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcC
Q 026853 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~ 215 (232)
+...++.+.+. ..++++++||||.||+.|++.+|.. +.++...........+++.+.|+.||+
T Consensus 154 K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~-va~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 154 KGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAF-IGFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEE-EEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCce-EEECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 33455555554 4578999999999999999999975 444432233344667889999998875
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=6.9e-23 Score=142.93 Aligned_cols=129 Identities=21% Similarity=0.235 Sum_probs=97.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchH---------------HHHHHHhhhcCCccccceeecc-----------c
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGS-----------D 142 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~~~l~~~~~~~~~~-----------~ 142 (232)
.+.++||+.++|+.|+++|+.++++||.+.- .....+ ...+.. ..+..++. .
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~cp~~p~~~~~~~~~ 102 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD-LDGIYYCPHHPQGSVEEFRQ 102 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC-CSEEEEECCBTTCSSGGGBS
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhh-hhhccc-ccceeecccccccccccccc
Confidence 3578999999999999999999999998631 111112 222221 11222222 3
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCE-EEEeCCCCCcccc-chhhhHhhhhccCcCcccc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHR-YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~-~i~v~~~~~~~~~-~~~~~~~~~~l~el~~~l~ 219 (232)
....+||+|.++..+++++++++++++||||+.+|+.+|+++|+. .+++.+|+..... ...|+++++++.|+.+.+.
T Consensus 103 ~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ik 181 (182)
T d2gmwa1 103 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 181 (182)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred cccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhc
Confidence 455689999999999999999999999999999999999999996 4777776554443 5679999999999987764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2.1e-23 Score=150.79 Aligned_cols=130 Identities=12% Similarity=0.058 Sum_probs=96.3
Q ss_pred ccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce---eecc----------cccCCCCCCHHHH
Q 026853 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV---IVGS----------DEVRTGKPSPDIF 154 (232)
Q Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~---~~~~----------~~~~~~kp~~~~~ 154 (232)
...+++|++.++++.|++.|++++++|++....++..+ +++++..+|.. .+.. ......++++...
T Consensus 72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK 150 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence 34679999999999999999999999999999999898 88887766522 1111 1223457788889
Q ss_pred HHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCC--CccccchhhhHhhhhccCcCccccCC
Q 026853 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP--KQTHRYTAADEVINSLLDLRPEKWGL 221 (232)
Q Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~--~~~~~~~~~~~~~~~l~el~~~l~~~ 221 (232)
..+++++++++++++|||||.+|+.||+.||+ .+..+. ........+...+++++|+...+..+
T Consensus 151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~---~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 216 (226)
T d2feaa1 151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL---CFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216 (226)
T ss_dssp HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSE---EEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred HHHHHHhcCCCceEEEEeCchhhHHHHHHCCE---EEEecchHHHHHHcCCCeeecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999995 333321 11111233445567777766655543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.87 E-value=6.2e-23 Score=146.40 Aligned_cols=193 Identities=17% Similarity=0.143 Sum_probs=127.3
Q ss_pred ccccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhh---hhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHH
Q 026853 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH---KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (232)
++.|+|+||+||||++++. +..+++..|+......+. .................. ... .....
T Consensus 2 ~kkKlv~FDlDGTL~d~es-----~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~ 67 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDL--------PIEKV 67 (210)
T ss_dssp CCCCEEEECCCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTC--------BHHHH
T ss_pred CCCeEEEEeCCCCcCCchH-----HHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHH-hhh--------HHHHH
Confidence 3579999999999999853 444555655421111110 001111111111111111 110 01112
Q ss_pred HhhhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc----------ccCCCCCCHHH
Q 026853 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRTGKPSPDI 153 (232)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~----------~~~~~kp~~~~ 153 (232)
........+.+++.+.++.+...|..++++|+.......... .+.+....+......+ ....+++++..
T Consensus 68 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (210)
T d1j97a_ 68 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 146 (210)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHhhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccch
Confidence 222345688999999999999999999999999888887777 6677766654443322 23456677888
Q ss_pred HHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh--hccCcCccc
Q 026853 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRPEK 218 (232)
Q Consensus 154 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~l~el~~~l 218 (232)
+...++.+++.++++++||||.||+.|++.+|+.+++ + ..+..++.|+++++ ++.++++.|
T Consensus 147 ~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n---a~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 147 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C---AKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S---CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-C---CCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 9999999999999999999999999999999976443 3 35666788999997 456666654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.3e-23 Score=142.85 Aligned_cols=105 Identities=16% Similarity=0.188 Sum_probs=80.3
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCc--------h-------HHHHHHHhhhcCCcc---ccceeecccccCCCCCC
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSH--------R-------ATIESKISYQHGWNE---SFSVIVGSDEVRTGKPS 150 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~--------~-------~~~~~~l~~~~~l~~---~~~~~~~~~~~~~~kp~ 150 (232)
.+.++||+.++|+.|++.|++++++||.+ . ..+...+ ...++.. +|+.....++....||+
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~i~~~~~~~~~~~~~~KP~ 106 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQFDEVLICPHLPADECDCRKPK 106 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHH-HHTTCCEEEEEEECCCGGGCCSSSTTS
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhc-cccccccceeeeccccccccccccccc
Confidence 45789999999999999999999999964 1 1122333 3344421 23333445667788999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
|.++.+++++++++|++++||||+..|+.+|+++|+++++++++
T Consensus 107 p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 107 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp SGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred cHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 99999999999999999999999999999999999999999874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.3e-23 Score=154.25 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=68.5
Q ss_pred ccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhh
Q 026853 134 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVI 208 (232)
Q Consensus 134 ~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~ 208 (232)
+++.....+....+||+|..++.+++++|++|++++||||++ +||.+|+++|+.+++|.+|...... ...||+++
T Consensus 162 ~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~ 241 (250)
T d2c4na1 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred HHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEE
Confidence 344444455667889999999999999999999999999998 6999999999999999987554443 24579999
Q ss_pred hhccCcC
Q 026853 209 NSLLDLR 215 (232)
Q Consensus 209 ~~l~el~ 215 (232)
+|+.||.
T Consensus 242 ~sl~eL~ 248 (250)
T d2c4na1 242 PSVAEID 248 (250)
T ss_dssp SSGGGCC
T ss_pred CCHHHhC
Confidence 9999974
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.85 E-value=2.5e-22 Score=142.33 Aligned_cols=105 Identities=21% Similarity=0.340 Sum_probs=81.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCch---------------HHHHHHHhhhcCCccccceeecc------------c
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS------------D 142 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~l~~~~~~~~~~------------~ 142 (232)
..++||+.++|+.|+++|++++|+||.+. ..+...+ ...|+ .++.++.. .
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~--~~~~~~~~~~~~~~~~~~~~~ 123 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGV--FVDMVLACAYHEAGVGPLAIP 123 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTC--CCSEEEEECCCTTCCSTTCCS
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhccc--ccceEEEeccccccccccccc
Confidence 46899999999999999999999999531 1122223 33332 23333222 2
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~ 197 (232)
+....||+|.++.++++++++++++++||||+.+|+.+|+++|+.++++..|...
T Consensus 124 ~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~ 178 (209)
T d2o2xa1 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA 178 (209)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE
T ss_pred ccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCc
Confidence 3345699999999999999999999999999999999999999999999886543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.85 E-value=1.6e-22 Score=148.54 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=63.1
Q ss_pred ccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhhhhccCc
Q 026853 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL 214 (232)
Q Consensus 141 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~l~el 214 (232)
.+....+||+|.+++.+++++|++|++|+||||+. +||.+|+++|+++++|.+|....+. ...||++++|+.|+
T Consensus 173 ~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 173 VKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp CCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred ceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 34445679999999999999999999999999998 5999999999999999987544433 34579999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.84 E-value=2.9e-22 Score=147.19 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=67.3
Q ss_pred cceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCccc----cchhhhHhhh
Q 026853 135 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVIN 209 (232)
Q Consensus 135 ~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~----~~~~~~~~~~ 209 (232)
+...........+||+|.++.++++++|++|++++||||+. +||.+|+++|+++++|.+|..... ....||++++
T Consensus 167 ~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~ 246 (253)
T d1yv9a1 167 VETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 246 (253)
T ss_dssp HHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred ccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEEC
Confidence 34445556667899999999999999999999999999997 699999999999999988744332 2456899999
Q ss_pred hccCc
Q 026853 210 SLLDL 214 (232)
Q Consensus 210 ~l~el 214 (232)
|+.|+
T Consensus 247 sl~e~ 251 (253)
T d1yv9a1 247 SLDEW 251 (253)
T ss_dssp SGGGC
T ss_pred CHHHc
Confidence 99987
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.83 E-value=1.1e-21 Score=144.67 Aligned_cols=76 Identities=21% Similarity=0.285 Sum_probs=66.0
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhhhcCCEEEEeCCCCCcccc----chhhhHhhhhccCcCcc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRPE 217 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~l~el~~~ 217 (232)
....+||+|..+..+++++|++|++++||||+. +||.+|+++|+.+++|.+|...... ...||++++|+.||.+.
T Consensus 180 ~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 180 DLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp SEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred ccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 345689999999999999999999999999997 7999999999999999987655433 34579999999999876
Q ss_pred c
Q 026853 218 K 218 (232)
Q Consensus 218 l 218 (232)
|
T Consensus 260 l 260 (261)
T d1vjra_ 260 V 260 (261)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.78 E-value=2.6e-19 Score=126.95 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=120.7
Q ss_pred ccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHH---HHHHcCCCccHHhHHHHHHHHHHh
Q 026853 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI---IVEDYGLPCAKHEFVNEVYSMFSD 85 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 85 (232)
+|+|+||+||||++. .+..+++..|+.......+.. ......... ++...+.. ...+..
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~~tgR~~--~~~~~~~~~~v~ll~~~~~~----------~~~~~~ 63 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALKATTRDI--PDYDVLMKQRLRILDEHGLK----------LGDIQE 63 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGGGCCTTTC--CCHHHHHHHHHHHHHHTTCC----------HHHHHH
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHHHHHCCCC--CCHHHHHHHHHHHHHhCCCc----------eehhhh
Confidence 489999999999984 355566777864322221111 111222211 11111111 111222
Q ss_pred hhccCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeeccc----ccCCCCCCHHHHHHHHHhc
Q 026853 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAAKRL 161 (232)
Q Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~----~~~~~kp~~~~~~~~~~~~ 161 (232)
........++....+..++ .+...+++|.+......... ..++....+....... ......+++......++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (206)
T d1rkua_ 64 VIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAF 141 (206)
T ss_dssp HHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHH
T ss_pred hhhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHHHHh
Confidence 2345678888888887765 56889999999888877777 6667655543332211 1123345556778889999
Q ss_pred CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-chhhhHh-hhhccCcCccccCCCCC
Q 026853 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEV-INSLLDLRPEKWGLPPF 224 (232)
Q Consensus 162 ~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~~~~~-~~~l~el~~~l~~~~~~ 224 (232)
+++++++++||||.||++|++.||.. |++ +..... +..++++ ..+.+|+.+.+....+.
T Consensus 142 ~i~~~eviaiGDg~NDi~Ml~~Ag~g---IAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 142 KSLYYRVIAAGDSYNDTTMLSEAHAG---ILF-HAPENVIREFPQFPAVHTYEDLKREFLKASSR 202 (206)
T ss_dssp HHTTCEEEEEECSSTTHHHHHHSSEE---EEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCSS
T ss_pred cccccceEEecCCccCHHHHHhCCcc---EEE-CCCHHHHHhCCCceeecCHHHHHHHHHHHhhC
Confidence 99999999999999999999999954 444 223343 5666775 47788888777654443
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.77 E-value=3.2e-19 Score=137.71 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=109.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccce--eeccc-----------ccCCCCCCHHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSD-----------EVRTGKPSPDIFLEAA 158 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~--~~~~~-----------~~~~~kp~~~~~~~~~ 158 (232)
|.+++.++|+.|+++|++++++||.+...+...+ +++|+..+|+. +++.+ .....||+|..+..++
T Consensus 216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 5569999999999999999999999999999999 99999999864 34433 2357899999998887
Q ss_pred Hh--------------cCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCcccc-----chhhhHhhhhccCcCcccc
Q 026853 159 KR--------------LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-----YTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 159 ~~--------------~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-----~~~~~~~~~~l~el~~~l~ 219 (232)
.. +++.+++|+||||+.||+.+|+++|+.+|+|.+|...... ...||++++++.|+...+.
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~ 374 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHH
Confidence 54 4577899999999999999999999999999998665543 3479999999999988876
Q ss_pred CC
Q 026853 220 GL 221 (232)
Q Consensus 220 ~~ 221 (232)
.+
T Consensus 375 ~l 376 (380)
T d1qyia_ 375 NL 376 (380)
T ss_dssp CT
T ss_pred HH
Confidence 54
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.71 E-value=1.8e-17 Score=111.51 Aligned_cols=104 Identities=15% Similarity=0.021 Sum_probs=73.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHH---HHHHHhhhc-----CCc-cccceeecccccCCCCCCHHHHHHHHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----GWN-ESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~-----~l~-~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
...++|++.++++.|++.|+.++++||.+... ....+ +.. .+. ..++... .......+|+.......+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~k~~~l~ 111 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGVPLVMQC-QREQGDTRKDDVVKEEIFW 111 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCCCCSEEE-ECCTTCCSCHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH-HHHhhhhhhcCCCcEEEee-cccccccCCchHHHHHHHH
Confidence 35789999999999999999999999986322 11222 111 111 1223322 2333445677777788887
Q ss_pred hcCCCCCc-EEEEeCchhhhhhhhhcCCEEEEeCCC
Q 026853 160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 160 ~~~~~~~~-~~~vgD~~~Di~~a~~~G~~~i~v~~~ 194 (232)
++...+.+ +++|||+..|+++++++|++++.|..|
T Consensus 112 ~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 112 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 77766666 467899999999999999999999886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=3.2e-16 Score=115.64 Aligned_cols=64 Identities=20% Similarity=0.108 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 147 ~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
+-.+..+++.+++.++++++++++|||+.||+.|++.+| +.+.+++..++.+..|++++.+..+
T Consensus 195 ~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~---~~~am~na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 195 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG---VGVAVDNAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCTTT
T ss_pred CCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 335677899999999999999999999999999999999 6667777788888888888876554
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.63 E-value=5.9e-16 Score=111.26 Aligned_cols=66 Identities=17% Similarity=0.049 Sum_probs=55.8
Q ss_pred cccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhh
Q 026853 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (232)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (232)
+....+.+++.+++.++++++++++++++|||+.||+.|++.+| +.|.+++..+..+..|++++.+
T Consensus 145 ei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag---~~vav~na~~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 145 HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVG---YKVAVAQAPKILKENADYVTKK 210 (230)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHTTCSEECSS
T ss_pred EEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCC---eEEEECCCCHHHHHhCCEEECC
Confidence 34557788999999999999999999999999999999999999 4555556667778888888765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.62 E-value=2e-17 Score=118.92 Aligned_cols=65 Identities=14% Similarity=-0.005 Sum_probs=52.9
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l 211 (232)
...+..++.+++.+++++|++++++++||||.||+.|++.+| +.|+.++..+..+..|++++.+-
T Consensus 146 ~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~---~~vav~na~~~~k~~ad~v~~~~ 210 (225)
T d1l6ra_ 146 MNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPV---RKACPANATDNIKAVSDFVSDYS 210 (225)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSS---EEEECTTSCHHHHHHCSEECSCC
T ss_pred cCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCC---eEEEECCCcHHHHHhCCEEECCC
Confidence 345566788999999999999999999999999999999999 44555556666777888876544
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.60 E-value=1.7e-16 Score=116.93 Aligned_cols=68 Identities=18% Similarity=0.065 Sum_probs=59.0
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccC
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~e 213 (232)
....+..|..+++.++++++++++++++|||+.||+.|++.+| +.|.+++..++.+..|++++.+..|
T Consensus 184 i~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~---~sva~~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAG---LRVAMENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCS---EEEECTTSCHHHHHHCSEECCCTTT
T ss_pred ecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 3455667889999999999999999999999999999999999 6677777788889999999877664
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.58 E-value=3.5e-16 Score=116.24 Aligned_cols=65 Identities=20% Similarity=0.102 Sum_probs=56.1
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
..+-.|..+++.+++.+|++++++++|||+.||+.|++.+| ..|++++..++.+..|++++.+..
T Consensus 209 ~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~---~svam~na~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 209 SRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAG---KGVAMGNAREDIKSIADAVTLTND 273 (285)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSS---EEEECTTCCHHHHHHCSEECCCGG
T ss_pred cccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCC---eEEEeCCCCHHHHHhCCEEcCCCC
Confidence 34556789999999999999999999999999999999999 666777777888889998887654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=2e-15 Score=111.13 Aligned_cols=64 Identities=16% Similarity=0.034 Sum_probs=55.3
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
.+-.+..+++.+++++|++++++++||||.||+.|++.+| ..|.+++..++.+..|++++.+..
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag---~~vam~Na~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMAR---YSFAMGNAAENIKQIARYATDDNN 250 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCS---EEEECTTCCHHHHHHCSEECCCGG
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCC---eEEEeCCCCHHHHHhCCEEcCCCC
Confidence 3445778999999999999999999999999999999999 667777777888899998887744
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.47 E-value=7.4e-16 Score=113.03 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=55.7
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhcc
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~ 212 (232)
...+..+..+++.+++++|++++++++||||.||+.|++.+| ..|.+++..++.+..|++++.+..
T Consensus 181 ~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~---~svav~na~~~lk~~A~~vt~~~~ 246 (260)
T d2rbka1 181 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAA---IGVAMGQAKEDVKAAADYVTAPID 246 (260)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCGG
T ss_pred EeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCC---eEEEeCCCCHHHHHhCCEEeCCCC
Confidence 345667889999999999999999999999999999999999 555666677777888888877643
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.45 E-value=4e-14 Score=102.36 Aligned_cols=61 Identities=7% Similarity=-0.064 Sum_probs=46.5
Q ss_pred CCCCCHHHHHHHHHhc-CCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhh
Q 026853 146 TGKPSPDIFLEAAKRL-NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~-~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~ 209 (232)
.+-.+..++..+++.+ ++.++++++|||+.||++|++.+| ..|.+++...+.+..++.+++
T Consensus 176 ~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~---~~va~~Na~~~~~~~~~~i~~ 237 (243)
T d1wzca1 176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVD---KVFIVGSLKHKKAQNVSSIID 237 (243)
T ss_dssp CSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSS---EEEEESSCCCTTCEEESCHHH
T ss_pred hhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCC---cEEEeCCCChHHHhhhhHHHH
Confidence 3455678889999998 589999999999999999999999 444445556666555555544
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.39 E-value=4.6e-13 Score=98.89 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=54.7
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhh
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (232)
...+..+..++..+++.++++++++++|||+.||+.|++.+| +.+.+++..++.+..|++++.+
T Consensus 202 ~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~---~~va~~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 202 TKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFK---YSFAVANATDSAKSHAKCVLPV 265 (283)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCS---EEEECTTCCHHHHHHSSEECSS
T ss_pred cCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCC---cEEEeCCCCHHHHHhCCEEECC
Confidence 345667789999999999999999999999999999999999 5556667777888888888754
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.34 E-value=4.2e-12 Score=90.77 Aligned_cols=45 Identities=11% Similarity=-0.036 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHH---hcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 148 KPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 148 kp~~~~~~~~~~---~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
..+..+.+.+++ .+|++++++++|||+.||+.|++.+|.. |+|.+
T Consensus 183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~-vaV~n 230 (232)
T d1xvia_ 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKG 230 (232)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCC
T ss_pred chHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeE-EEEeC
Confidence 344555666554 5689999999999999999999999953 45543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=4.5e-11 Score=82.39 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=68.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCchH---HHHHHHhhhcCCccc--cceeecccccCCCCCCHHHHHHHHHhcCCC
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNES--FSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~~l~~~--~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 164 (232)
..+.||+.++++.++++|+.++.+||+... .....|.+.+|+... .+.++..+. ..|.. -+..++++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I- 158 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI- 158 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE-
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe-
Confidence 457889999999999999999999998543 344555344776432 233333322 22222 2344466776
Q ss_pred CCcEEEEeCchhhhhhhhhcCCEEEEeCC
Q 026853 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 165 ~~~~~~vgD~~~Di~~a~~~G~~~i~v~~ 193 (232)
+++|||..+|+.+|+++|++.|-+.+
T Consensus 159 ---~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred ---EEEecCCHHHHhHHHHcCCCceEeec
Confidence 78999999999999999999999977
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.29 E-value=3.6e-11 Score=86.69 Aligned_cols=62 Identities=19% Similarity=0.048 Sum_probs=52.0
Q ss_pred cCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 144 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
...+..+..+++.+++.+|++++++++|||+.||+.|.+.+| ..+..++..++.+..++.+.
T Consensus 157 ~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~---~~vav~na~~~lk~~a~~~~ 218 (244)
T d1s2oa1 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSA---RGVIVRNAQPELLHWYDQWG 218 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSS---EEEECTTCCHHHHHHHHHHC
T ss_pred EeCccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCC---cEEEeCCCCHHHHHHhhccc
Confidence 345566788999999999999999999999999999999999 56666677777777777543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.25 E-value=2e-11 Score=89.52 Aligned_cols=96 Identities=20% Similarity=0.187 Sum_probs=65.9
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc-----c---------ccCCCCCCHHHH
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-----D---------EVRTGKPSPDIF 154 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~-----~---------~~~~~kp~~~~~ 154 (232)
.+.+.||+.++++.|+++|++++|+|++....++..+ +++|+...--.+++- + .......+....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl-~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-HHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 5789999999999999999999999999999999998 878865321112221 1 011111122233
Q ss_pred HHHHH--hcCCCCCcEEEEeCchhhhhhhhhcC
Q 026853 155 LEAAK--RLNMEPSSSLVIEDSVIGVVAGKAAG 185 (232)
Q Consensus 155 ~~~~~--~~~~~~~~~~~vgD~~~Di~~a~~~G 185 (232)
..... ...-...+++++|||.+|+.||..+.
T Consensus 212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 33323 22335678999999999999998654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.18 E-value=1.1e-11 Score=84.48 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=85.6
Q ss_pred HHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhh
Q 026853 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (232)
Q Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di 178 (232)
.+..|+..|+.++++|+.....+.... ..+++...+. ..+++...++.+++++++++++|+||||+.||+
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~-~~l~~~~~~~---------~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFL---------GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHH-hhhccccccc---------ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 477788899999999999888887777 6666543222 245567888999999999999999999999999
Q ss_pred hhhhhcCCEEEEeCCCCCccccchhhhHhhhh------ccCcCcccc
Q 026853 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS------LLDLRPEKW 219 (232)
Q Consensus 179 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------l~el~~~l~ 219 (232)
.+.+.+| +.++.++..+..+..|++++.+ +.|+.+.++
T Consensus 110 ~~l~~~g---~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 110 PAFAACG---TSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHHSS---EEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHhhCC---eEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 9999999 5666666677778888888766 666666554
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=1.1e-09 Score=76.15 Aligned_cols=176 Identities=15% Similarity=0.170 Sum_probs=97.5
Q ss_pred EEEeCCCcccccHHHHHHHHHHHHHHcCCCCCcchhhhhcCCChHHHHHHHHHHcCCCccHHhHHHHHHHHHH--hhhcc
Q 026853 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS--DHLCK 89 (232)
Q Consensus 12 i~fDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 89 (232)
|++|+||||+|....+.+.+. +.++...... ............+... .++....+...+. ..+..
T Consensus 6 I~iDmDGVL~Df~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~e~~~~~~~~~~~~~ff~~ 72 (195)
T d1q92a_ 6 VLVDMDGVLADFEGGFLRKFR---ARFPDQPFIA-LEDRRGFWVSEQYGRL---------RPGLSEKAISIWESKNFFFE 72 (195)
T ss_dssp EEECSBTTTBCHHHHHHHHHH---HHCTTSCCCC-GGGCCSSCHHHHHHHH---------STTHHHHHHHHHTSTTTTTT
T ss_pred EEEECCCccccCHHHHHHHHH---HHcCCccccC-hhhhccchhHHHhCCC---------cHHHHHHHHHHhhhhhHHhh
Confidence 789999999998665443333 3444322111 1111111111111100 1122233333332 23567
Q ss_pred CCCCCcHHHHHHHHHhCC-CCEEEEeCCchHH------HHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcC
Q 026853 90 VKALPGANRLIKHLSCHG-VPMALASNSHRAT------IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~------~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 162 (232)
+++.||+.+++..|++.| +.+.++|...... ...-|.++++-......+++. + |. .+.
T Consensus 73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~-~----K~----------~~~ 137 (195)
T d1q92a_ 73 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTR-D----KT----------VVS 137 (195)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECS-C----ST----------TSC
T ss_pred CCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEcc-c----cc----------eec
Confidence 899999999999999865 4577888764321 112242333322222233322 1 21 111
Q ss_pred CCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 163 ~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
. -++|+|++.++..+.++|+.++.+..++++..........+.+..|....++
T Consensus 138 --~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~il 190 (195)
T d1q92a_ 138 --A--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAIL 190 (195)
T ss_dssp --C--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHH
T ss_pred --C--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHHH
Confidence 1 2899999999999999999999998876665433333456677777654443
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.08 E-value=2.1e-10 Score=74.34 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=72.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEE
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 170 (232)
++.|++++.++.|++.|++++++|+.........- +.+|+...+.. -.|+-.....++++.. ..+.|
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia-~~lgI~~v~~~-----------~~p~~k~~~v~~~q~~-~~v~~ 87 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAE-----------VLPHQKSEEVKKLQAK-EVVAF 87 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECS-----------CCHHHHHHHHHHHTTT-SCEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHH-hhhhhhhhccc-----------cchhHHHHHHHHHHcC-CEEEE
Confidence 57899999999999999999999999998888776 88887543321 2234444555555543 57899
Q ss_pred EeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh--hhccCc
Q 026853 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDL 214 (232)
Q Consensus 171 vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~l~el 214 (232)
+||+.||..+++.+++. +..+......+..+|.++ ++++.+
T Consensus 88 vGDg~nD~~aL~~Advg---ia~~~~~~~~~~aADivl~~~~l~~i 130 (135)
T d2b8ea1 88 VGDGINDAPALAQADLG---IAVGSGSDVAVESGDIVLIRDDLRDV 130 (135)
T ss_dssp EECSSSSHHHHHHSSEE---EEECCC--------SEEESSCCTHHH
T ss_pred EeCCCCcHHHHHhCCee---eecCccCHHHHHhCCEEEECCCHHHH
Confidence 99999999999999954 444333333355666655 334444
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=4.7e-10 Score=77.04 Aligned_cols=94 Identities=16% Similarity=0.295 Sum_probs=74.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCc--------hHHH----HHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHH
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSH--------RATI----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~--------~~~~----~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 159 (232)
++|++.+.|+.|++.|+.++|+||.+ .+.+ ...+ +.++. .+...++......+||.+.++..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~-~~l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGV--PFQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH-HHHTS--CCEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH-HHcCC--CccEEEecCccccCCCccHHHHHHHH
Confidence 57999999999999999999999973 2222 2223 44454 33455666667789999999999999
Q ss_pred hcC----CCCCcEEEEeCc-----------------hhhhhhhhhcCCEE
Q 026853 160 RLN----MEPSSSLVIEDS-----------------VIGVVAGKAAGMEV 188 (232)
Q Consensus 160 ~~~----~~~~~~~~vgD~-----------------~~Di~~a~~~G~~~ 188 (232)
+++ ++.++++||||. ..|+..|.++|++.
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF 177 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 177 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCcc
Confidence 986 888999999994 48999999999874
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2e-10 Score=82.28 Aligned_cols=58 Identities=7% Similarity=-0.155 Sum_probs=41.3
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCcEEEEeCch----hhhhhhhhcCCEEEEeCCCCCccccchhhhHh
Q 026853 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV----IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207 (232)
Q Consensus 145 ~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~----~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~ 207 (232)
..+..+..+++.+++ .+++++++|||+. ||++|.+.+|...+.|.+ ..+..+..++++
T Consensus 181 ~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n--a~~~~k~~~~~~ 242 (244)
T d2fuea1 181 PEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS--PQDTVQRCREIF 242 (244)
T ss_dssp ETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS--HHHHHHHHHHHH
T ss_pred chhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC--HHHHHHHHHHhc
Confidence 345566778887764 5889999999975 999999999976666655 333334444444
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.99 E-value=2.8e-08 Score=76.17 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=78.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhc--------CCccccceeeccccc-----------------C
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEV-----------------R 145 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--------~l~~~~~~~~~~~~~-----------------~ 145 (232)
...|.+...|..|++.|.++.++||+....+...+.-.+ .|..+||.||+.... +
T Consensus 185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g 264 (458)
T d2bdea1 185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENG 264 (458)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTC
T ss_pred cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCC
Confidence 456889999999999999999999999988766663223 588899998875210 0
Q ss_pred -------CCCCC---HHHHHHHHHhcCCCCCcEEEEeCch-hhhhhhh-hcCCEEEEeCC
Q 026853 146 -------TGKPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (232)
Q Consensus 146 -------~~kp~---~~~~~~~~~~~~~~~~~~~~vgD~~-~Di~~a~-~~G~~~i~v~~ 193 (232)
..++. ..-.....+.+|....+|++|||+. .||...+ ..||.|++|..
T Consensus 265 ~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 265 TMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp CEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred ccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 00110 1225677888899999999999999 8977765 68999999987
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=1.8e-10 Score=82.56 Aligned_cols=45 Identities=9% Similarity=-0.151 Sum_probs=32.8
Q ss_pred CCCCCHHHHHHHHHhcCCCCCcEEEEeC----chhhhhhhhhcCCEEEEeCC
Q 026853 146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 146 ~~kp~~~~~~~~~~~~~~~~~~~~~vgD----~~~Di~~a~~~G~~~i~v~~ 193 (232)
.+-.|..+++++ ++++++++++||| |.||++|++.+|..+++|++
T Consensus 182 ~~vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 182 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred cccCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 334444555544 4678999999999 66999999999977777766
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.69 E-value=1.8e-08 Score=67.63 Aligned_cols=114 Identities=13% Similarity=0.046 Sum_probs=75.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcccccee----eccccc----------------CCCCCC
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI----VGSDEV----------------RTGKPS 150 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~----~~~~~~----------------~~~kp~ 150 (232)
++.+++++.++.|++.|+++.++|+.........- +..|+...-..+ +.+.+. ....-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHH-HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 67899999999999999999999999988887776 788874322111 111100 011233
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhh
Q 026853 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (232)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~ 208 (232)
|+--..+.+.++-....+.|+||+.||..+.+.+. +++..+......+..+++++
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~Ad---vGIa~~~gt~~a~~aAdivl 153 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAE---IGIAMGSGTAVAKTASEMVL 153 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSS---EEEEETTSCHHHHHTCSEEE
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCC---EEEEeccccHHHHHhCCEEE
Confidence 44444555555544577999999999999999999 44444322222244455543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=98.00 E-value=7.5e-06 Score=51.32 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=25.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEeCCc
Q 026853 90 VKALPGANRLIKHLSCHGVPMALASNSH 117 (232)
Q Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~ 117 (232)
..|.+++.+.+..|++.|+.+.+.|.+.
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4688999999999999999999999884
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.82 E-value=2e-05 Score=49.33 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=27.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCchHHHH
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSHRATIE 122 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~ 122 (232)
.|.+++.+.|+.|++.|+.+.+.|.+......
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~ 52 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLD 52 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchH
Confidence 57899999999999999999999999765543
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.65 E-value=3.5e-06 Score=58.97 Aligned_cols=67 Identities=10% Similarity=0.007 Sum_probs=46.9
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhcCCEEEEeCCCCCccccchhhhHhhhhccCcCcccc
Q 026853 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (232)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~l~el~~~l~ 219 (232)
....+..+..+++.++++ +++++|||+.||+.|.+.+|.. +.|..|+. ++.|.+.+++..|+.+++.
T Consensus 153 i~p~g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~----~~~A~~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDA-LTIKVGEG----ETHAKFHVADYIEMRKILK 219 (229)
T ss_dssp EECTTCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTS-EEEEESSS----CCCCSEEESSHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCe-EEEEeCCC----CccCeEEcCCHHHHHHHHH
Confidence 344566677888887754 6799999999999999999754 44544433 2456777777777655543
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.00015 Score=48.75 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=68.6
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcE
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 168 (232)
.+...||+.+||+.+.+. +.++|.|.+....+...+ +.+.-...+...+..+.+....+ .+.+-++.+|-+.+++
T Consensus 53 ~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il-~~ldp~~~~~~~~~r~~c~~~~~---~~~KdL~~l~~~l~~v 127 (181)
T d1ta0a_ 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHRG---NYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCSSCCEEEEECGGGSEEETT---EEECCGGGSCSCGGGE
T ss_pred EEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHH-HHhccCCceeEEEEeeeeeecCC---cccccHhhcCCCHHHe
Confidence 356899999999999987 899999999999999998 77766566655554443322111 1223356778888999
Q ss_pred EEEeCchhhhhhhhhcCCE
Q 026853 169 LVIEDSVIGVVAGKAAGME 187 (232)
Q Consensus 169 ~~vgD~~~Di~~a~~~G~~ 187 (232)
+.|+|++.-...-...|+.
T Consensus 128 vivDd~~~~~~~~~~N~I~ 146 (181)
T d1ta0a_ 128 LILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp EEECSCGGGGTTCGGGBCC
T ss_pred EEEcCChhhhhcCccCeeE
Confidence 9999999766665556643
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.63 E-value=0.021 Score=39.36 Aligned_cols=98 Identities=18% Similarity=0.199 Sum_probs=67.1
Q ss_pred cCCCCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecc----ccc--------------------
Q 026853 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DEV-------------------- 144 (232)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~----~~~-------------------- 144 (232)
...+.||+.+.++.+.+. .+-+|+|.+...++++.- ++.|++. . +.+. +..
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~-~~~gfp~--e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~ 153 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTA-SMIGVRG--E-LHGTEVDFDSIAVPEGLREELLSIIDVIASL 153 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHH-HHTTCCS--E-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHH-hhcCCCc--e-eecccccccccCCChHHHHHHHHHhhhccCc
Confidence 468999999999999887 789999999888888666 7777741 1 1111 000
Q ss_pred ----------------------CCCCC-----CHHHHHHHHHhcCCCCCcEEEEeCchhhhhhhhhc---CCEEEEeCC
Q 026853 145 ----------------------RTGKP-----SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA---GMEVVAVPS 193 (232)
Q Consensus 145 ----------------------~~~kp-----~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~~---G~~~i~v~~ 193 (232)
..-|+ +..+.+..++..++.+. ++||||..|++|.+.+ |.-+|.+++
T Consensus 154 ~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGlaIsFNG 230 (308)
T d1y8aa1 154 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGVAIAFNG 230 (308)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCEEEEESC
T ss_pred cHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCeeEEecC
Confidence 01111 12334556667777664 9999999999997664 555677776
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.09 E-value=0.00056 Score=47.20 Aligned_cols=12 Identities=50% Similarity=0.833 Sum_probs=11.0
Q ss_pred EEEEeCCCcccc
Q 026853 11 CVILDLDGTLLN 22 (232)
Q Consensus 11 ~i~fDlDGTL~~ 22 (232)
+|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 689999999996
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=94.44 E-value=0.0083 Score=39.72 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=15.1
Q ss_pred ccccEEEEeCCCccccc
Q 026853 7 KLMSCVILDLDGTLLNT 23 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~ 23 (232)
..+|+++||+||||+|.
T Consensus 3 ~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGCCEEEEECTTTTSCS
T ss_pred ccCeEEEEccCCcccCC
Confidence 47899999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=92.70 E-value=0.044 Score=40.84 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=18.1
Q ss_pred ccEEEEeCCCcccccHHHHHHH
Q 026853 9 MSCVILDLDGTLLNTDGMFSEV 30 (232)
Q Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~ 30 (232)
+|.|+||+||+|++....+..+
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s 22 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVS 22 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEeCCcEEEcceeecchH
Confidence 4789999999999997776543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.31 E-value=0.2 Score=34.52 Aligned_cols=48 Identities=23% Similarity=0.382 Sum_probs=34.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceee
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIV 139 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~ 139 (232)
.+.|++.++++.|++.|++++++||+. .......+ ..+|+.-..+.++
T Consensus 19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l-~~~G~~~~~~~i~ 69 (250)
T d2c4na1 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRF-ATAGVDVPDSVFY 69 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHH-HHTTCCCCGGGEE
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHH-hhccccccceeEe
Confidence 456788999999999999999999865 34444555 5567654444444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=90.90 E-value=0.2 Score=34.76 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=36.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeecc
Q 026853 91 KALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGS 141 (232)
Q Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~~ 141 (232)
.+.|++.++++.|++.|.+++++||+. .......+ ...|+.-..+.++++
T Consensus 23 ~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~-~~~g~~~~~~~v~ts 75 (261)
T d1vjra_ 23 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL-RNMGVDVPDDAVVTS 75 (261)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH-HHTTCCCCGGGEEEH
T ss_pred ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhhccccccceeccH
Confidence 456899999999999999999999864 33344455 566776555666543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.04 E-value=0.077 Score=35.43 Aligned_cols=17 Identities=41% Similarity=0.550 Sum_probs=14.0
Q ss_pred ccccEEEEeCCCccccc
Q 026853 7 KLMSCVILDLDGTLLNT 23 (232)
Q Consensus 7 ~~~k~i~fDlDGTL~~~ 23 (232)
.+-|+++||.||||...
T Consensus 19 ~~~Kia~fDrDGtLik~ 35 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITT 35 (195)
T ss_dssp CCSCEEEECSBTTTEEC
T ss_pred CcCcEEEEECCCceEee
Confidence 34589999999999854
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=88.34 E-value=0.27 Score=33.91 Aligned_cols=49 Identities=14% Similarity=0.324 Sum_probs=34.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeec
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVG 140 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~ 140 (232)
+.|++.++++.|++.|++++++||+. ...+.+.+...+++....+.+++
T Consensus 19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~ 70 (253)
T d1wvia_ 19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYT 70 (253)
T ss_dssp ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEE
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccccccc
Confidence 46788899999999999999999863 33344455344566555555554
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=88.32 E-value=2.6 Score=28.59 Aligned_cols=97 Identities=11% Similarity=0.104 Sum_probs=70.2
Q ss_pred CCCCcHHHHHHH---HHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCc
Q 026853 91 KALPGANRLIKH---LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (232)
Q Consensus 91 ~~~~~~~~~l~~---l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 167 (232)
.++|+..++++. |-+.|+.+..+++.+....+ .| +..|.....-. -+.-..+.+..++..++.++++.+++
T Consensus 106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak-~L-e~~Gc~avMPl-gsPIGSg~Gl~n~~~l~~i~~~~~vP--- 179 (251)
T d1xm3a_ 106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLAR-KL-EELGVHAIMPG-ASPIGSGQGILNPLNLSFIIEQAKVP--- 179 (251)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHH-HH-HHHTCSCBEEC-SSSTTCCCCCSCHHHHHHHHHHCSSC---
T ss_pred CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHH-HH-HHcCChhHHHh-hhhhhcCCCcCChHHHHHHHhcCCcc---
Confidence 468888888754 66789999999999888765 45 55675331100 01112345677899999999998775
Q ss_pred EEEEeCch---hhhhhhhhcCCEEEEeCCC
Q 026853 168 SLVIEDSV---IGVVAGKAAGMEVVAVPSL 194 (232)
Q Consensus 168 ~~~vgD~~---~Di~~a~~~G~~~i~v~~~ 194 (232)
+.|+-+. +|...|-++|...+++|+.
T Consensus 180 -vIvDAGIG~pSdAa~AMElG~daVLvNTA 208 (251)
T d1xm3a_ 180 -VIVDAGIGSPKDAAYAMELGADGVLLNTA 208 (251)
T ss_dssp -BEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred -EEEecCCCCHHHHHHHHHccCCEEEechh
Confidence 5666554 8999999999999999983
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=88.19 E-value=0.3 Score=34.07 Aligned_cols=40 Identities=8% Similarity=0.121 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
.+...+.|++|+++|++++++|+++...+...+ +.+++..
T Consensus 20 ~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~-~~l~~~~ 59 (285)
T d1nrwa_ 20 SLENENALRQAQRDGIEVVVSTGRAHFDVMSIF-EPLGIKT 59 (285)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-GGGTCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHhCCCc
Confidence 355678899999999999999999998888887 7777654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=87.97 E-value=0.37 Score=33.15 Aligned_cols=49 Identities=14% Similarity=0.383 Sum_probs=32.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCc---hHHHHHHHhhhcCCccccceeec
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVG 140 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~l~~~~~~~~~ 140 (232)
+.|++.++++.|++.|++++++||+. .......|...+++....+.+++
T Consensus 19 ~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i~~ 70 (253)
T d1yv9a1 19 PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYT 70 (253)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEE
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccccC
Confidence 45788899999999999999999864 33333334344455444454443
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=87.74 E-value=0.68 Score=30.38 Aligned_cols=87 Identities=9% Similarity=0.061 Sum_probs=50.4
Q ss_pred cHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHHHHHHHHhcCCCCCcEEEEeCc
Q 026853 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (232)
Q Consensus 95 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vgD~ 174 (232)
++.+.|..+++.+-++++++-.....--..+.+.+++.-.+-.+.+.++ ....-.-+++-|++ +.|||+
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e-------~~~~v~~l~~~G~~----vVVG~~ 150 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEED-------ARGQINELKANGTE----AVVGAG 150 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHH-------HHHHHHHHHHTTCC----EEEESH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEEEEecCHHH-------HHHHHHHHHHCCCC----EEECCh
Confidence 4555666666677889999876443333334355565322111111111 11222233444654 679999
Q ss_pred hhhhhhhhhcCCEEEEeCC
Q 026853 175 VIGVVAGKAAGMEVVAVPS 193 (232)
Q Consensus 175 ~~Di~~a~~~G~~~i~v~~ 193 (232)
.. ...|++.|++.+++.+
T Consensus 151 ~~-~~~A~~~Gl~~vli~S 168 (186)
T d2pjua1 151 LI-TDLAEEAGMTGIFIYS 168 (186)
T ss_dssp HH-HHHHHHTTSEEEESSC
T ss_pred HH-HHHHHHcCCCEEEEeC
Confidence 64 4788999999999976
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.02 E-value=0.14 Score=33.61 Aligned_cols=16 Identities=44% Similarity=0.775 Sum_probs=13.6
Q ss_pred cccEEEEeCCCccccc
Q 026853 8 LMSCVILDLDGTLLNT 23 (232)
Q Consensus 8 ~~k~i~fDlDGTL~~~ 23 (232)
+-.++++|+|+||+.+
T Consensus 14 ~k~~LVLDLDeTLihs 29 (181)
T d1ta0a_ 14 DKICVVIDLDETLVHS 29 (181)
T ss_dssp TSCEEEECCBTTTEEE
T ss_pred CCeEEEEeCCCCEEcc
Confidence 3468999999999976
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.22 E-value=0.85 Score=30.31 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=31.1
Q ss_pred CCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
.+.+.+.+++|++.|++++++|+.+.......+ ...++..
T Consensus 21 ~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~-~~~~~~~ 60 (230)
T d1wr8a_ 21 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAAS-ILIGTSG 60 (230)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHHTCCS
T ss_pred CHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HhcCCCc
Confidence 455677888899999999999999888877666 5555543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=82.36 E-value=0.95 Score=30.22 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=31.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhhhcCCcc
Q 026853 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (232)
Q Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~l~~ 133 (232)
+.+++.+.++.|++.|++++++|+.+........ ..+++..
T Consensus 21 i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~-~~~~~~~ 61 (225)
T d1l6ra_ 21 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALK-IFLGING 61 (225)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCCS
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHH-HHcCCCc
Confidence 4456778899999999999999999887766555 6666644
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=81.51 E-value=2 Score=31.51 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=55.9
Q ss_pred HHHHHHHHHhC-CCC-EEEEeCCchHHHHHHHhhhcCCccccceeecccccCCCCCCHHH---HHHHHHhcCCCCCcEEE
Q 026853 96 ANRLIKHLSCH-GVP-MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI---FLEAAKRLNMEPSSSLV 170 (232)
Q Consensus 96 ~~~~l~~l~~~-g~~-~~i~s~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~kp~~~~---~~~~~~~~~~~~~~~~~ 170 (232)
+..++..|++. ++. ..++|+...+...... +.+++...++.-+..+.....+.-... +...+.+ ..|+-+++
T Consensus 18 l~pli~~l~~~~~~~~~li~tG~H~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~kpD~v~v 94 (377)
T d1o6ca_ 18 MAPLVLELKKYPEIDSYVTVTAQHRQMLDQVL-DAFHIKPDFDLNIMKERQTLAEITSNALVRLDELFKD--IKPDIVLV 94 (377)
T ss_dssp HHHHHHHGGGCTTEEEEEEECCSCGGGTHHHH-HHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHH--HCCSEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHH-hhcCCCCceeeecCCCCCCHHHHHHHHHHhhhhhhhh--cccceeEe
Confidence 35678888775 333 3566776655555555 667775443322222111100101111 2223333 46888999
Q ss_pred EeCchhhh---hhhhhcCCEEEEeCCCCCc
Q 026853 171 IEDSVIGV---VAGKAAGMEVVAVPSLPKQ 197 (232)
Q Consensus 171 vgD~~~Di---~~a~~~G~~~i~v~~~~~~ 197 (232)
+||...-+ .+|...|++.+-+-.|...
T Consensus 95 ~GDr~e~la~a~aa~~~~Ipi~HiegG~~s 124 (377)
T d1o6ca_ 95 HGDTTTTFAGSLAAFYHQIAVGHVEAGLRT 124 (377)
T ss_dssp ETTCHHHHHHHHHHHHTTCEEEEESCCCCC
T ss_pred eecccccchhhhhhhhccceEEEEeccccc
Confidence 99998544 5577789999998886555
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