Citrus Sinensis ID: 026956

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
MATGLIRRAISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSNLL
cccHHHHHHHHHHHcccccHHHHHHHHHHcHHHcccccccccccccCEEEEEEEEcccccccccCEEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccccEEEccccccccccEEECcccccccEEEEccHHHHHHHHHHcccEEccccccccccccccccHHHHHHHccccHHHcccccccccccccccccccccHHHHHHHHcHHccccc
*************************************************FQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR**************KKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSNLL
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MATGLIRRAISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSNLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).probableQ8LB02
Succinate dehydrogenase iron-sulfur subunit probableQ4UN71
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).probableQ75CI4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.5.-With a quinone or related compound as acceptor.probable
1.3.5.111-cis-retinol dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VR8, chain B
Confidence level:very confident
Coverage over the Query: 45-228
View the alignment between query and template
View the model in PyMOL