Citrus Sinensis ID: 026978
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 230 | 2.2.26 [Sep-21-2011] | |||||||
| Q15GI3 | 323 | Isoeugenol synthase 1 OS= | N/A | no | 0.995 | 0.708 | 0.416 | 1e-57 | |
| Q15GI4 | 314 | Eugenol synthase 1 OS=Oci | N/A | no | 0.691 | 0.506 | 0.597 | 5e-53 | |
| E1U332 | 308 | Isoflavone reductase-like | N/A | no | 0.717 | 0.535 | 0.461 | 5e-32 | |
| P52577 | 310 | Isoflavone reductase homo | yes | no | 0.734 | 0.545 | 0.423 | 2e-31 | |
| P52578 | 308 | Isoflavone reductase homo | N/A | no | 0.717 | 0.535 | 0.408 | 2e-29 | |
| P52579 | 310 | Isoflavone reductase homo | N/A | no | 0.713 | 0.529 | 0.417 | 2e-27 | |
| P52580 | 309 | Isoflavone reductase homo | N/A | no | 0.717 | 0.533 | 0.414 | 1e-25 | |
| P52581 | 312 | Isoflavone reductase homo | N/A | no | 0.726 | 0.535 | 0.409 | 3e-25 | |
| P52576 | 318 | Isoflavone reductase OS=P | N/A | no | 0.717 | 0.518 | 0.320 | 4e-23 | |
| Q00016 | 318 | Isoflavone reductase OS=C | N/A | no | 0.713 | 0.515 | 0.335 | 5e-23 |
| >sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 175/298 (58%), Gaps = 69/298 (23%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKAS+S GH T+ Y P+ +NS SKL++ KEF+ +GVTI GEL EH K+V++ KEVD
Sbjct: 21 MVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VIST+A PQ+L+QL+++ AIK AGNIKRF+PSEFG E D+VR LP F+A L+ K+ +RR
Sbjct: 81 IVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVRALPRFQAVLDNKKKIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAKA--------------- 165
A EAA IP+TFVSAN AYFV+ LL P + + V +YGSG+AKA
Sbjct: 141 ATEAAGIPFTFVSANSLTAYFVDYLLHPRQKSEQVTIYGSGDAKAVLNYEEDVAAYTIKA 200
Query: 166 ------------LPPPEDI----------------PISIMH----SLLAKGDSMNF---- 189
+ PP++I + + H ++ +S+NF
Sbjct: 201 ADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHISEQEIIKLSESINFPENI 260
Query: 190 -----------------ELGED-DIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAF 229
EL +D D+EAS+LYP++ +T++D+ L I L++PPKP +
Sbjct: 261 HASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSVDEYLKICLVNPPKPKLATY 318
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Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices. Petunia hybrida (taxid: 4102) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1EC: 9 |
| >sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 129/164 (78%), Gaps = 5/164 (3%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVK S+ GH T+V+ RP NS SK + EFQ +G I++GELDEH+K+V ++K+VD
Sbjct: 23 MVKGSLKLGHPTYVFTRP---NS--SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVD 77
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVIS +A+PQ LDQ +I+ AIKVAGNIKRFLPS+FG EED++ LPPFEA +E+KR++RR
Sbjct: 78 VVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRR 137
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAK 164
AIE A IPYT+VSAN +YF+N LLRP++ D++ VYG+GEAK
Sbjct: 138 AIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAK 181
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Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices. Ocimum basilicum (taxid: 39350) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 8 |
| >sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS S H TF AR T S P K +I + F+ GVTI+ G+L +H+ +V +K+VD
Sbjct: 20 IVEASAKSEHPTFALARESTI-SDPVKGKIIQGFKNSGVTILTGDLYDHESLVKAIKQVD 78
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV Q DQ++I+ AIK AGN+KRF PS+FG + D+ + P ++ E K +RR
Sbjct: 79 VVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRCHAVEPAKSSFEIKSQIRR 138
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFES---HDDVVVYGSGEAKAL 166
AIEA IPYTFVSAN Y + L++P + D V++ G G AKA+
Sbjct: 139 AIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVIILGDGNAKAV 187
|
Olea europaea (taxid: 4146) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS +GH TF R T S P K + + F+ +GVTI+ G+L++H+ +V +K+VD
Sbjct: 21 LVEASAKAGHSTFALVREATL-SDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV Q LDQ +I+ AIK AGN+KRFLPSEFG + D+ + P ++ K +RR
Sbjct: 80 VVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------SHDDVVVYGSGEAKALPPPED 171
IEA IPYT+ G Y++ L++ FE D V + G G AKA+ E+
Sbjct: 140 TIEAEGIPYTYAVTGCFGGYYLPTLVQ-FEPGLTSPPRDKVTILGDGNAKAVINKEE 195
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS +GH TFV R T S P+K ++ F+ GVT + G+L +H+ +V +K+VD
Sbjct: 20 IVEASAKAGHDTFVLVRESTL-SNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVD 78
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV + DQ++++ AIK AGN+KRF PSEFG + D+V + P +A K +RR
Sbjct: 79 VVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVHAVEPAKAAFNTKAQIRR 138
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFES---HDDVVVYGSGEAKAL 166
+EA IP+T+V+ Y + L +P + +D VV+ G G KA+
Sbjct: 139 VVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAV 187
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Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 6/170 (3%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+ S SGH TF R T + P K ++ F+ GVT++ G++ + ++ +K+VD
Sbjct: 22 LVETSAKSGHPTFALIRESTLKN-PEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV QF DQ+ I+ AIK AGNIKRFLPSEFG + D R + P + K +RR
Sbjct: 81 VVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHARAIEPAASLFALKVRIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFES----HDDVVVYGSGEAKAL 166
IEA IPYT+V N +F+ L + E+ D VV++G G KA+
Sbjct: 141 MIEAEGIPYTYVICNWFADFFLPNLGQ-LEAKTPPRDKVVIFGDGNPKAI 189
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Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V AS GH T R T S P+K + K FQ GVT+++G+L + +VS +K D
Sbjct: 21 VVAASARLGHPTSALVRD-TAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGAD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVIS + Q DQ +V AIK AGN+KRF PSEFG + D+ + P ++ L K +RR
Sbjct: 80 VVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYF---VNVLLRPFESHDDVVVYGSGEAKAL 166
A EAA IPYT+ A + V +L P D VV G G+ KA+
Sbjct: 140 ATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAV 188
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Zea mays (taxid: 4577) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 16/183 (8%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+VKAS+ GH+TF+ RP KL+I F+ G ++E +HK +V +K VD
Sbjct: 19 IVKASLEHGHETFILQRPEI-GLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVD 77
Query: 61 VVISTVAYPQF-----LDQLEIVHAIKVAGNIKRFLPSEFGCEEDKV-RPLPPFEAYLEK 114
VVI T++ F L QL++V AIK AGNIKRFLPSEFG + + L P ++
Sbjct: 78 VVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDE 137
Query: 115 KRIVRRAIEAAQIPYTFVSANLCGAYF------VNVLLRPFESHDDVVVYGSGEAKALPP 168
K VR+AIE A IP+T++SAN YF + LL P D V++YG G K +
Sbjct: 138 KMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPP---RDKVLLYGDGNVKPVYM 194
Query: 169 PED 171
ED
Sbjct: 195 DED 197
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Lupinus albus (taxid: 3870) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKL----------EIHKEFQGIGVTIIEGELDEHK 50
+V AS+ +G+ T+ R + N KL E+ K +Q GV ++EG++++H+
Sbjct: 20 IVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHE 79
Query: 51 KIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEA 110
+V+ +K+VD VI DQ++++ AIK AGN+KRF PSEFG + D+ + P
Sbjct: 80 TLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDRHDAVEPVRQ 139
Query: 111 YLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRPFES---HDDVVVYGSGEAKA 165
E+K +RR +E+ +PYT++ + YF+ L + + D VV+ G G +
Sbjct: 140 VFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRG 197
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Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 15/179 (8%)
Query: 1 MVKASVSSGHKTFVYARP----------VTQNSRPSKLEIHKEFQGIGVTIIEGELDEHK 50
+V AS+ +G+ T+ R V + SK E+ + F+ GV ++EG++++H+
Sbjct: 20 VVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHE 79
Query: 51 KIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEA 110
+V +K+VD VI T LDQ++I+ AIK AGN+KRF PSEFG + D+ + P
Sbjct: 80 ALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDRHDAVDPVRP 139
Query: 111 YLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRPFES----HDDVVVYGSGEAKA 165
++K +RR +EA +PYT++ + YF+ L + F++ D V++ G G K
Sbjct: 140 VFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQ-FDATEPPRDKVIILGDGNVKG 197
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Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. Cicer arietinum (taxid: 3827) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 230 | ||||||
| 2706515 | 320 | isoflavone reductase-like protein [Citru | 0.721 | 0.518 | 0.939 | 7e-84 | |
| 356508274 | 312 | PREDICTED: eugenol synthase 1-like isofo | 0.995 | 0.733 | 0.482 | 1e-71 | |
| 356508272 | 314 | PREDICTED: eugenol synthase 1-like isofo | 0.995 | 0.729 | 0.482 | 2e-71 | |
| 255637209 | 314 | unknown [Glycine max] | 0.995 | 0.729 | 0.482 | 3e-71 | |
| 357455793 | 316 | Eugenol synthase [Medicago truncatula] g | 0.991 | 0.721 | 0.496 | 3e-70 | |
| 357455785 | 317 | Eugenol synthase [Medicago truncatula] g | 0.995 | 0.722 | 0.483 | 1e-69 | |
| 388510598 | 317 | unknown [Medicago truncatula] | 0.995 | 0.722 | 0.483 | 2e-69 | |
| 357455787 | 310 | Eugenol synthase [Medicago truncatula] g | 0.965 | 0.716 | 0.466 | 1e-65 | |
| 224145043 | 318 | phenylcoumaran benzylic ether reductase | 0.721 | 0.522 | 0.722 | 3e-65 | |
| 224154451 | 252 | predicted protein [Populus trichocarpa] | 0.721 | 0.658 | 0.734 | 4e-65 |
| >gi|2706515|emb|CAA73220.1| isoflavone reductase-like protein [Citrus x paradisi] | Back alignment and taxonomy information |
|---|
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/166 (93%), Positives = 161/166 (96%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEH+KIVSILKEVD
Sbjct: 23 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHEKIVSILKEVD 82
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV YPQ LDQL+IVHAIKVAGNIKRFLPS+F CEED+VRPLPPFEA LEKKRIVRR
Sbjct: 83 VVISTVTYPQCLDQLKIVHAIKVAGNIKRFLPSDFECEEDRVRPLPPFEACLEKKRIVRR 142
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAKAL 166
AIEAAQIPYTFVSANLCGAYFVNVLLRP ESHDDVVVYGSGEAKA+
Sbjct: 143 AIEAAQIPYTFVSANLCGAYFVNVLLRPSESHDDVVVYGSGEAKAV 188
|
Source: Citrus x paradisi Species: Citrus x paradisi Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508274|ref|XP_003522883.1| PREDICTED: eugenol synthase 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 191/294 (64%), Gaps = 65/294 (22%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASV+ GH TFVY RP+ + SK ++ KEF +GVT++ GEL EH +I++++K+VD
Sbjct: 20 MVKASVTLGHPTFVYTRPLDAQTPSSKAQLCKEFNSMGVTLVHGEL-EHDQILAVIKQVD 78
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI ++ YPQ ++QL+I+ AIKVAGNIKRFLPS+FG EED+V PLPPF+A+L+KKR +RR
Sbjct: 79 IVICSLPYPQVMEQLKIIDAIKVAGNIKRFLPSDFGVEEDRVNPLPPFQAFLDKKRKIRR 138
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYTFVSAN GAYFVN LLRP+E
Sbjct: 139 EIEAAGIPYTFVSANCFGAYFVNYLLRPYEITVYGNGDTKAVLNYEEDIAMYTIKVANDP 198
Query: 151 -SHDDVVVY------------------GSGE---------------AKALPPPEDIPISI 176
+++ VV+Y SG+ ++ LPPP +IP+SI
Sbjct: 199 RTYNRVVIYRPSKNIISQNELIALWEQKSGQNFRKDFVAEEEIVNLSQTLPPPHNIPVSI 258
Query: 177 MHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
+HS+ +GD + FE+GEDD+EAS+LYPD+ +T+ID+LLDIFL+DPP PA AFE
Sbjct: 259 LHSVFVRGDLVRFEIGEDDLEASQLYPDYNYTSIDELLDIFLVDPPAPASAAFE 312
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508272|ref|XP_003522882.1| PREDICTED: eugenol synthase 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 191/294 (64%), Gaps = 65/294 (22%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASV+ GH TFVY RP+ + SK ++ KEF +GVT++ GEL EH +I++++K+VD
Sbjct: 22 MVKASVTLGHPTFVYTRPLDAQTPSSKAQLCKEFNSMGVTLVHGEL-EHDQILAVIKQVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI ++ YPQ ++QL+I+ AIKVAGNIKRFLPS+FG EED+V PLPPF+A+L+KKR +RR
Sbjct: 81 IVICSLPYPQVMEQLKIIDAIKVAGNIKRFLPSDFGVEEDRVNPLPPFQAFLDKKRKIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYTFVSAN GAYFVN LLRP+E
Sbjct: 141 EIEAAGIPYTFVSANCFGAYFVNYLLRPYEITVYGNGDTKAVLNYEEDIAMYTIKVANDP 200
Query: 151 -SHDDVVVY------------------GSGE---------------AKALPPPEDIPISI 176
+++ VV+Y SG+ ++ LPPP +IP+SI
Sbjct: 201 RTYNRVVIYRPSKNIISQNELIALWEQKSGQNFRKDFVAEEEIVNLSQTLPPPHNIPVSI 260
Query: 177 MHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
+HS+ +GD + FE+GEDD+EAS+LYPD+ +T+ID+LLDIFL+DPP PA AFE
Sbjct: 261 LHSVFVRGDLVRFEIGEDDLEASQLYPDYNYTSIDELLDIFLVDPPAPASAAFE 314
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255637209|gb|ACU18935.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 191/294 (64%), Gaps = 65/294 (22%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASV+ GH TFVY RP+ + SK ++ KEF +GVT++ GEL EH +I++++K+VD
Sbjct: 22 MVKASVTLGHPTFVYTRPLDAQTPSSKAQLCKEFNSMGVTLVHGEL-EHDQILAVIKQVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI ++ YPQ ++QL+I+ AIKVAGNIKRFLPS+FG EED+V PLPPF+A+L+KKR +RR
Sbjct: 81 IVICSLPYPQVMEQLKIIDAIKVAGNIKRFLPSDFGVEEDRVNPLPPFQAFLDKKRKIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYTFVSAN GAYFVN LLRP+E
Sbjct: 141 EIEAAGIPYTFVSANCFGAYFVNYLLRPYEITVYGNGDTKAVLNYEEDIAMYAIKVANDP 200
Query: 151 -SHDDVVVY------------------GSGE---------------AKALPPPEDIPISI 176
+++ VV+Y SG+ ++ LPPP +IP+SI
Sbjct: 201 RTYNRVVIYRPSKNIISQNELIALWEQKSGQNFRKDFVAEEEIVNLSRTLPPPHNIPVSI 260
Query: 177 MHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
+HS+ +GD + FE+GEDD+EAS+LYPD+ +T+ID+LLDIFL+DPP PA AFE
Sbjct: 261 LHSVFVRGDLVRFEIGEDDLEASQLYPDYNYTSIDELLDIFLVDPPAPAFAAFE 314
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455793|ref|XP_003598177.1| Eugenol synthase [Medicago truncatula] gi|355487225|gb|AES68428.1| Eugenol synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 187/298 (62%), Gaps = 70/298 (23%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKAS+S GH TFVY P+ + SK+++ KEF IGVT++EGEL EH +IV ++K+VD
Sbjct: 21 MVKASISLGHPTFVYTHPINSKTPNSKIQLCKEFNSIGVTLVEGEL-EHDQIVKVIKQVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI T YPQ L+QL+I+ AIKVAGNIKRFLPS+FG EED+V PLPPF+A+L+KK +RR
Sbjct: 80 IVICTFPYPQVLEQLKIIDAIKVAGNIKRFLPSDFGVEEDRVHPLPPFQAFLDKKIKIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYTFVSAN GAYFVN LLRP+E
Sbjct: 140 EIEAAGIPYTFVSANCFGAYFVNFLLRPYENKKDIVVYGSGESKAILNYEEDIAMYTIKV 199
Query: 151 -----SHDDVVVY------------------GSGE---------------AKALPPPEDI 172
+H+ +VVY SG+ ++ LPPPEDI
Sbjct: 200 ANYPRAHNRIVVYRPLKNIISQNELISLWELKSGQNFNKVFVPEEDIIKLSQTLPPPEDI 259
Query: 173 PISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
PISI+HS+ KGD M FEL E+D+EAS+LYP++ +T+IDQLLD FL+DPP P AFE
Sbjct: 260 PISIVHSIFVKGD-MYFELEENDLEASQLYPNYNYTSIDQLLDKFLVDPPPPVSAAFE 316
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455785|ref|XP_003598173.1| Eugenol synthase [Medicago truncatula] gi|355487221|gb|AES68424.1| Eugenol synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 186/298 (62%), Gaps = 69/298 (23%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+VKAS+S G+ T VY RP+ + PSK+++ KEF IG T++EGEL EH +IV ++KE D
Sbjct: 21 VVKASISLGYPTLVYTRPINSQTSPSKIQLCKEFNSIGATLVEGEL-EHDQIVRVIKEAD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI T YPQ ++QL+IV AIKVAGNIKRF+PS+FG EED+V PLPPF+A+L+KK +RR
Sbjct: 80 IVICTFPYPQVMEQLKIVDAIKVAGNIKRFVPSDFGVEEDRVHPLPPFQAFLDKKIKIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYT+VSAN GAYFVN+LLRP+E
Sbjct: 140 EIEAAGIPYTYVSANCFGAYFVNILLRPYEKNKDIVVHGSGQVKAVLNYEEDVAMYTIKV 199
Query: 151 -----SHDDVVVY------------------GSGE---------------AKALPPPEDI 172
+H+ +VVY SG+ ++ LPPPEDI
Sbjct: 200 ANDPRTHNRIVVYRPSKNIISQNELISLWELKSGQKFHKVFVPEEDIVKLSQTLPPPEDI 259
Query: 173 PISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
PISI+HS+ +GD NFEL EDD+EAS+LYP + +T+IDQLLD FL+DP PA AFE
Sbjct: 260 PISIIHSIFVRGDMANFELEEDDLEASQLYPGYNYTSIDQLLDKFLVDPIPPAYGAFE 317
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388510598|gb|AFK43365.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 186/298 (62%), Gaps = 69/298 (23%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+VKAS+S G+ T VY RP+ + PSK+++ KEF IG T++EGEL EH +IV ++KE D
Sbjct: 21 VVKASISLGYPTLVYTRPINSQTSPSKIQLCKEFNSIGATLVEGEL-EHGQIVRVIKEAD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI T YPQ ++QL+IV AIKVAGNIKRF+PS+FG EED+V PLPPF+A+L+KK +RR
Sbjct: 80 IVICTFPYPQVVEQLKIVDAIKVAGNIKRFVPSDFGVEEDRVHPLPPFQAFLDKKIKIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYT+VSAN GAYFVN+LLRP+E
Sbjct: 140 EIEAAGIPYTYVSANCFGAYFVNILLRPYEKNKDIVVHGSGQVKAVLNYEEDVAMYTIKV 199
Query: 151 -----SHDDVVVY------------------GSGE---------------AKALPPPEDI 172
+H+ +VVY SG+ ++ LPPPEDI
Sbjct: 200 ANDPRTHNRIVVYRPSKNIISQNELISLWELKSGQKFHKVFVPEEDIVKLSQTLPPPEDI 259
Query: 173 PISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
PISI+HS+ +GD NFEL EDD+EAS+LYP + +T+IDQLLD FL+DP PA AFE
Sbjct: 260 PISIIHSIFVRGDMANFELEEDDLEASQLYPGYNYTSIDQLLDKFLVDPIPPAYGAFE 317
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455787|ref|XP_003598174.1| Eugenol synthase [Medicago truncatula] gi|355487222|gb|AES68425.1| Eugenol synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 180/298 (60%), Gaps = 76/298 (25%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+VKAS+S G+ T VY RP+ + PSK+++ KEF IG T++E IV ++KE D
Sbjct: 21 VVKASISLGYPTLVYTRPINSQTSPSKIQLCKEFNSIGATLVE--------IVRVIKEAD 72
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VI T YPQ ++QL+IV AIKVAGNIKRF+PS+FG EED+V PLPPF+A+L+KK +RR
Sbjct: 73 IVICTFPYPQVMEQLKIVDAIKVAGNIKRFVPSDFGVEEDRVHPLPPFQAFLDKKIKIRR 132
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFE------------------------------ 150
IEAA IPYT+VSAN GAYFVN+LLRP+E
Sbjct: 133 EIEAAGIPYTYVSANCFGAYFVNILLRPYEKNKDIVVHGSGQVKAVLNYEEDVAMYTIKV 192
Query: 151 -----SHDDVVVY------------------GSGE---------------AKALPPPEDI 172
+H+ +VVY SG+ ++ LPPPEDI
Sbjct: 193 ANDPRTHNRIVVYRPSKNIISQNELISLWELKSGQKFHKVFVPEEDIVKLSQTLPPPEDI 252
Query: 173 PISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAFE 230
PISI+HS+ +GD NFEL EDD+EAS+LYP + +T+IDQLLD FL+DP PA AFE
Sbjct: 253 PISIIHSIFVRGDMANFELEEDDLEASQLYPGYNYTSIDQLLDKFLVDPIPPAYGAFE 310
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145043|ref|XP_002336195.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222832409|gb|EEE70886.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 142/166 (85%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASVS GHKT++YARP+T S P+K+ IHKEFQ +GVTI++GE DE +K+VS+L++VD
Sbjct: 21 MVKASVSMGHKTYLYARPITTQSSPAKISIHKEFQAMGVTIVQGEFDEQEKLVSVLRDVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTVAYPQ LDQL+I+ AIKVAGNIKRF PS+FG EED+V PLPPFEA+L+KKR +RR
Sbjct: 81 VVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVTPLPPFEAFLDKKRKIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAKAL 166
A E A IPYTFVSAN GAYFVNVLLRP E D+ VYGSGEAKA+
Sbjct: 141 ATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDISVYGSGEAKAV 186
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224154451|ref|XP_002337478.1| predicted protein [Populus trichocarpa] gi|222839435|gb|EEE77772.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/166 (73%), Positives = 141/166 (84%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVKASVS GHKT+VYARP+T S P+K+ IHKEFQ +GVTI++GE DE +KIVS+L+ VD
Sbjct: 21 MVKASVSMGHKTYVYARPITTQSSPAKIGIHKEFQAMGVTIVQGEFDEQEKIVSVLRHVD 80
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTVAYPQ LDQL+I+ AIKVAGNIKRF PS+FG EED+V PLPPFEA+L+KKR +RR
Sbjct: 81 VVISTVAYPQVLDQLKIIEAIKVAGNIKRFFPSDFGVEEDRVTPLPPFEAFLDKKRKIRR 140
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAKAL 166
A E A IPYTFVSAN GAYFVNVLLRP E D+ VYGSGEAKA+
Sbjct: 141 ATEEAGIPYTFVSANCFGAYFVNVLLRPHEQPQDIPVYGSGEAKAV 186
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 230 | ||||||
| TAIR|locus:2136383 | 308 | AT4G39230 [Arabidopsis thalian | 0.739 | 0.551 | 0.440 | 5.8e-40 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.743 | 0.537 | 0.415 | 7.4e-40 | |
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.739 | 0.548 | 0.430 | 1.2e-39 | |
| TAIR|locus:2016482 | 310 | AT1G19540 [Arabidopsis thalian | 0.786 | 0.583 | 0.393 | 5.7e-36 | |
| TAIR|locus:2031730 | 317 | PRR1 "pinoresinol reductase 1" | 0.739 | 0.536 | 0.388 | 3.8e-33 | |
| TAIR|locus:2025167 | 322 | AT1G75300 [Arabidopsis thalian | 0.904 | 0.645 | 0.350 | 1.6e-29 | |
| TAIR|locus:2119455 | 317 | PRR2 "pinoresinol reductase 2" | 0.739 | 0.536 | 0.35 | 2.9e-29 | |
| TAIR|locus:2139494 | 306 | AT4G34540 [Arabidopsis thalian | 0.695 | 0.522 | 0.349 | 1.6e-28 |
| TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 328 (120.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 78/177 (44%), Positives = 106/177 (59%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS SGH T V R T S PS+ + F+ +GV + G+LD+H +V+ +K+ D
Sbjct: 20 IVEASARSGHPTLVLVRNSTLTS-PSRSSTIENFKNLGVQFLLGDLDDHTSLVNSIKQAD 78
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFE-AYLEKKRIVR 119
VVISTV + Q +I+ AIK AGN+KRF PSEFG + D+V + P + AY K +I R
Sbjct: 79 VVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRVFTVEPAKSAYATKAKI-R 137
Query: 120 RAIEAAQIPYTFVSANLCGAYFVNVLLRPFES---HDDVVVYGSGEAKAL-PPPEDI 172
R IEA IPYT+VS N YF+ L +P + D V+V G G KA+ EDI
Sbjct: 138 RTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGDGNPKAVFNKEEDI 194
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 324 (119.1 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 74/178 (41%), Positives = 107/178 (60%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+++ASV +GH T R + S P+K + + F+ GVT++ G+L++H+ +V +K+ D
Sbjct: 21 IIEASVKAGHSTLALVREASL-SDPNKGKTVQNFKDFGVTLLHGDLNDHESLVKAIKQAD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV Q LDQ +I+ AIK AGN+KRFLPSEFG + DK + P ++ +K RR
Sbjct: 80 VVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDKSSAVEPAKSAFGRKLQTRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVL--LRP-FES--HDDVVVYGSGEAKA-LPPPEDI 172
IEA IPYT++ N Y++ L L P S D V ++G G KA + EDI
Sbjct: 140 DIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVKIFGDGNVKAVINKEEDI 197
|
|
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 339 (124.4 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 77/179 (43%), Positives = 108/179 (60%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS +GH TF R T S P K + + F+ +GVTI+ G+L++H+ +V +K+VD
Sbjct: 21 LVEASAKAGHSTFALVREATL-SDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV Q LDQ +I+ AIK AGN+KRFLPSEFG + D+ + P ++ K +RR
Sbjct: 80 VVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFES------HDDVVVYGSGEAKA-LPPPEDI 172
IEA IPYT+ G Y++ L++ FE D V + G G AKA + EDI
Sbjct: 140 TIEAEGIPYTYAVTGCFGGYYLPTLVQ-FEPGLTSPPRDKVTILGDGNAKAVINKEEDI 197
|
|
| TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+ S SGH TF R + S P K ++ + F+ +GVTI+ G L + + +V +K+VD
Sbjct: 18 LVEESAKSGHATFALVREASL-SDPVKAQLVERFKDLGVTILYGSLSDKESLVKAIKQVD 76
Query: 61 VVISTVA--YPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIV 118
VVIS V + L+Q I+ AIK +GN+KRFLPSEFG + D+ + P + K +
Sbjct: 77 VVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDRTVAIEPTLSEFITKAQI 136
Query: 119 RRAIEAAQIPYTFVSANLCGAYFVNVL----LR-PFESHDDVVVYGSGEAKALP-PPEDI 172
RRAIEAA+IPYT+V + FV L LR D V +Y +G KA+ EDI
Sbjct: 137 RRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVSIYDTGNGKAIVNTEEDI 196
Query: 173 PISIMHSLLAKGD 185
+ ++L A D
Sbjct: 197 ---VAYTLKAVDD 206
|
|
| TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 70/180 (38%), Positives = 105/180 (58%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+A ++ GH+T+V RP K+++ F+ +G I+EG +H+ +VS +K VD
Sbjct: 25 IVRACLAEGHETYVLQRPEI-GLEIEKVQLFLSFKKLGARIVEGSFSDHQSLVSAVKLVD 83
Query: 61 VVISTVAYPQF-----LDQLEIVHAIKVAGNIKRFLPSEFGCEEDKV-RPLPPFEAYLEK 114
VV+S ++ F L QL++V AIK AGN+KRFLPSEFG + ++ LPP ++
Sbjct: 84 VVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMDPPRMGHALPPGRETFDQ 143
Query: 115 KRIVRRAIEAAQIPYTFVSANLCGAYFV-NV--LLRPFESHDDVVVYGSGEAKALPPPED 171
K VR+AIEAA IPYT+V AYF N+ ++ + V +YG G K + ED
Sbjct: 144 KMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEKVNIYGDGNVKVVFADED 203
|
|
| TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 80/228 (35%), Positives = 130/228 (57%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+ S +G+ TF R + S P K + + F+ +GVTI+ G+L++H+ +V +K+VD
Sbjct: 21 IVEGSAKAGNPTFALVREASL-SDPVKSKTIQSFKDLGVTILHGDLNDHESLVKAIKQVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVIST+ + Q DQ +I+ AIK AGN+KRFLP+EFG + ++ + P ++ K +RR
Sbjct: 80 VVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVERTSAVEPAKSLFAGKVQIRR 139
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRPFES----H--DDVVVYGSGEAKALPPPEDIPI 174
AIEA IPYT+V +N +++ LL+ FES H D +++G K +PP + + I
Sbjct: 140 AIEAEGIPYTYVVSNCSAGFYLRTLLQ-FESGLISHTRDKAIIFGD---KNVPPRDKVTI 195
Query: 175 SIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPP 222
L G++ E+D+ A + T+++ L I PP
Sbjct: 196 ------LGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTL---YISPP 234
|
|
| TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 260 (96.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 63/180 (35%), Positives = 101/180 (56%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V A ++ GH+T+V RP K+++ F+ +G ++EG +H+ +VS +K+VD
Sbjct: 25 IVSACLAEGHETYVLQRPEI-GVDIEKVQLLLSFKRLGAHLVEGSFSDHQSLVSAVKQVD 83
Query: 61 VVISTVAYPQFLD-----QLEIVHAIKVAGNIKRFLPSEFGCEEDKV-RPLPPFEAYLEK 114
VV+S ++ F QL++V AIK AGN+KRFLPSEFG + ++ +PP ++
Sbjct: 84 VVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDPSRMGHAMPPGSETFDQ 143
Query: 115 KRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRP---FESHDDVVVYGSGEAKALPPPED 171
K +R AI+AA I +T++ AYF L + F + V +YG G K + ED
Sbjct: 144 KMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNKVDIYGDGNVKVVFVDED 203
|
|
| TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 242 (90.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 59/169 (34%), Positives = 89/169 (52%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+ + S+ SGH TF R T + KL K GVT+++G L++ + + +VD
Sbjct: 23 LTRFSIESGHPTFALIRNTTLSD---KL---KSLSDAGVTLLKGSLEDEGSLAEAVSKVD 76
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVIS + LDQ +V IK AG+IKRF+P+E+G DK + + KK +R
Sbjct: 77 VVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQVSDLDHDFYSKKSEIRH 136
Query: 121 AIEAAQIPYTFVSANLCGAYFVNVLLRP-FESH--DDVVVYGSGEAKAL 166
IE+ IPYT++ L + L++P +S D V V+G G KA+
Sbjct: 137 MIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTVFGDGNVKAV 185
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | grail3.9071000102 | hypothetical protein (252 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 230 | |||
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 5e-52 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 4e-35 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-05 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 0.001 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 5e-52
Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 16/180 (8%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V+AS+ +GH R K E+ K + GV ++EG+LD+H+ +V LK VD
Sbjct: 14 VVRASLKAGHPVRALVRD-------PKSELAKSLKAAGVELVEGDLDDHESLVEALKGVD 66
Query: 61 VVISTVAY---PQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRI 117
VV S + + D ++ A K AG +K F+PSEFG + D+ + P + + K
Sbjct: 67 VVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDVDRSNGVEPAVPHFDSKAE 125
Query: 118 VRRAIEAAQIPYTFVSANLCGAYFVNVLLRPFE---SHDDVVVYGSGEAKALPPP--EDI 172
V R I A IPYTFV A F++ L P + D V + G G KA+P EDI
Sbjct: 126 VERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGPGNPKAVPLDDEEDI 185
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NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 4e-35
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 22/172 (12%)
Query: 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV 59
+V A ++S G V RP + +S EFQ GV ++ + H+ +V+ LK V
Sbjct: 15 IVSALLASPGFTVTVLTRPSSTSS--------NEFQPSGVKVVPVDYASHESLVAALKGV 66
Query: 60 DVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVR 119
D VIS + DQL+++ A AG +KRF+PSEFG + D++ LP ++KR VR
Sbjct: 67 DAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDRIGALPLL-DLFDEKRDVR 124
Query: 120 RAIEAA--QIPYTFVSANLCGAYFVNVLLRPFESHDD-----VVVYGSGEAK 164
R + A +P+T+VS G F++ LL P D +YG GE K
Sbjct: 125 RYLRAKNAGLPWTYVS---TGM-FLDYLLEPLFGVVDLANRTATIYGDGETK 172
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PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-05
Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 22/147 (14%)
Query: 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDV 61
+ + GH+ + R +L + V ++EG+L + + ++ VDV
Sbjct: 15 ARELLEQGHEVTLLVR------NTKRLS---KEDQEPVAVVEGDLRDLDSLSDAVQGVDV 65
Query: 62 VISTVAYPQFLD---------QLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPL---PPFE 109
VI P+ ++ A K AG +K F+ + P
Sbjct: 66 VIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFISSLGAYGDLHEETEPSPSS 124
Query: 110 AYLEKKRIVRRAIEAAQIPYTFVSANL 136
YL K + A +PYT V +
Sbjct: 125 PYLAVKAKTEAVLREASLPYTIVRPGV 151
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Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDV 61
V+ + G++ R PS+ E + + G ++ G+L + + + + L+ +D
Sbjct: 16 VRELLDRGYQVRALVRD------PSQAE---KLEAAGAEVVVGDLTDAESLAAALEGIDA 66
Query: 62 VISTV-AYPQ---------FLDQLEIVHAIKVAGNIKRF-LPSEFGCEEDKVRPLPPFEA 110
VIS + + + + ++ A K AG +KRF L S G + PL
Sbjct: 67 VISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSSIGA-DKPSHPLEALGP 124
Query: 111 YLEKKRIVRRAIEAAQIPYTFVSANLCGAYF 141
YL+ KR + A+ + YT V G
Sbjct: 125 YLDAKRKAEDYLRASGLDYTIVRP---GGLT 152
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 230 | |||
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.92 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.85 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.76 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.74 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.73 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.72 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.69 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.67 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.66 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.63 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.61 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.61 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.54 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.54 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.53 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.53 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.52 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.52 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.52 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.52 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.5 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.5 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.49 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.49 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.49 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.48 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.46 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.46 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.45 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.45 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.43 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.43 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.43 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.41 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.4 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.4 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.39 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.37 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.37 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.34 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.34 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.33 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.32 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.3 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.28 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.28 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.27 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.26 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.26 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.25 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.24 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.24 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.23 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.23 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.21 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.2 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.18 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.18 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.13 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.11 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.1 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.08 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.06 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.98 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 98.95 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.95 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.93 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.92 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.89 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 98.87 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.86 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.85 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.83 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.83 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.82 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.81 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.8 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.79 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.75 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.75 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.72 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.71 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.71 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.71 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.69 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.66 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.66 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.65 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.65 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.64 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.64 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.63 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.6 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.6 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.58 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.56 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.56 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.51 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.49 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.49 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.48 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.48 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.48 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.45 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.43 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.42 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.41 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.41 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.4 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.4 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.4 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.4 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.39 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.38 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.37 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.37 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.37 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.36 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.36 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.35 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.35 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.34 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.34 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.33 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.33 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.32 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.32 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.31 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.3 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.3 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.3 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.3 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.29 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.29 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.28 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.28 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.28 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.28 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.27 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.27 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.26 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.25 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.22 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.22 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.21 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.21 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.18 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.17 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.17 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.17 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.17 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.17 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.16 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.15 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.14 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.13 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.13 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.11 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.1 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.1 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.09 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.08 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.07 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.07 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.06 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.04 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.04 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.03 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.01 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.01 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.97 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.94 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 97.92 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.9 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.89 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.88 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.88 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.87 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.85 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.85 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.85 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.83 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.81 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.79 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.77 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 97.75 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.74 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.74 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.71 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.69 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.68 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.56 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.52 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.52 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.41 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.41 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.41 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.4 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 97.4 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.39 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.33 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.31 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.3 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.29 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.29 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.26 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.21 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.15 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.1 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.06 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.03 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.95 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 96.9 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 96.82 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 96.74 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.74 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 96.72 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.7 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 96.57 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.48 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 96.33 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 96.2 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 96.2 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 96.11 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.09 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.04 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.98 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.92 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.84 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 95.78 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.74 | |
| COG1255 | 129 | Uncharacterized protein conserved in archaea [Func | 95.74 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 95.6 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.56 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 95.38 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 95.27 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 95.26 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 94.76 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 94.74 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 94.67 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 94.67 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 94.66 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.6 | |
| PLN00106 | 323 | malate dehydrogenase | 94.35 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 94.13 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 94.04 | |
| PF03686 | 127 | UPF0146: Uncharacterised protein family (UPF0146); | 93.83 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 93.81 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 93.35 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 93.29 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 93.16 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 93.02 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 92.92 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 92.92 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 92.89 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 92.2 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 92.06 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 92.01 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 91.43 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 91.34 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 91.24 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 90.95 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 90.77 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 90.7 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 90.36 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 90.31 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 90.24 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 90.2 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 90.13 | |
| PRK09287 | 459 | 6-phosphogluconate dehydrogenase; Validated | 90.06 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 89.75 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 89.73 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 89.51 | |
| PRK08462 | 445 | biotin carboxylase; Validated | 89.47 | |
| COG3963 | 194 | Phospholipid N-methyltransferase [Lipid metabolism | 89.3 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 88.7 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 88.7 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 88.64 | |
| PF03853 | 169 | YjeF_N: YjeF-related protein N-terminus; InterPro: | 88.35 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 87.99 | |
| PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 87.96 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 87.76 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 87.6 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 87.35 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 86.91 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 86.75 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 86.6 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 86.49 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 86.38 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 86.11 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 85.75 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 85.48 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 85.12 | |
| PF04016 | 147 | DUF364: Domain of unknown function (DUF364); Inter | 84.2 | |
| PTZ00314 | 495 | inosine-5'-monophosphate dehydrogenase; Provisiona | 84.18 | |
| KOG4589 | 232 | consensus Cell division protein FtsJ [Cell cycle c | 83.64 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 83.5 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 82.68 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 82.58 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 81.97 | |
| PF12683 | 275 | DUF3798: Protein of unknown function (DUF3798); In | 81.9 | |
| PLN02274 | 505 | inosine-5'-monophosphate dehydrogenase | 81.83 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 81.68 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 81.62 | |
| PRK07807 | 479 | inosine 5-monophosphate dehydrogenase; Validated | 81.57 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 81.49 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 81.39 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 81.32 | |
| TIGR01305 | 343 | GMP_reduct_1 guanosine monophosphate reductase, eu | 80.86 | |
| PRK07178 | 472 | pyruvate carboxylase subunit A; Validated | 80.7 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 80.31 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 80.17 | |
| COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/su | 80.1 |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=176.76 Aligned_cols=159 Identities=26% Similarity=0.464 Sum_probs=124.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---ChhhHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---QFLDQLEI 77 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---~~~~~~~l 77 (230)
++++|++.+|+|++++|+.++. + .+.|+..|++++.+|+.|.++|.++|+|+|+||++.+.. ....+.++
T Consensus 14 v~~~L~~~~~~V~~l~R~~~~~----~---~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~l 86 (233)
T PF05368_consen 14 VVRALLSAGFSVRALVRDPSSD----R---AQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNL 86 (233)
T ss_dssp HHHHHHHTTGCEEEEESSSHHH----H---HHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHH
T ss_pred HHHHHHhCCCCcEEEEeccchh----h---hhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhH
Confidence 4789999999999999986421 2 234556799999999999999999999999999999843 47789999
Q ss_pred HHHHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccc---cCCCCCCCc
Q 026978 78 VHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVL---LRPFESHDD 154 (230)
Q Consensus 78 l~Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~---~~~~~~~~~ 154 (230)
++||+++| |||||+|+|+.+........|..++++.|..+|++|++.+++||+||||+|++++...+ ..+......
T Consensus 87 i~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~ 165 (233)
T PF05368_consen 87 IDAAKAAG-VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDV 165 (233)
T ss_dssp HHHHHHHT--SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSE
T ss_pred HHhhhccc-cceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccccccceE
Confidence 99999999 99999999987664433333556788999999999999999999999999999886533 223321136
Q ss_pred EEEecCCCcccCC
Q 026978 155 VVVYGSGEAKALP 167 (230)
Q Consensus 155 ~~i~g~G~~~~~~ 167 (230)
+.++++|+.+..+
T Consensus 166 ~~~~~~~~~~~~~ 178 (233)
T PF05368_consen 166 VTLPGPGNQKAVP 178 (233)
T ss_dssp EEEETTSTSEEEE
T ss_pred EEEccCCCccccc
Confidence 8899999865544
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=160.14 Aligned_cols=176 Identities=18% Similarity=0.256 Sum_probs=121.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------C
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------Q 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------~ 70 (230)
|+++|+++||+|++++|+.+.. . .+...+++++.+|++|+++|.++++|+|+|||+++.. +
T Consensus 16 lv~~Ll~~g~~V~~l~R~~~~~------~---~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~~~~~~~ 86 (317)
T CHL00194 16 IVRQALDEGYQVRCLVRNLRKA------S---FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLYNAKQID 86 (317)
T ss_pred HHHHHHHCCCeEEEEEcChHHh------h---hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCccchhhhh
Confidence 5789999999999999985321 1 2234689999999999999999999999999997643 2
Q ss_pred hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccc-cCC
Q 026978 71 FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVL-LRP 148 (230)
Q Consensus 71 ~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~-~~~ 148 (230)
+.++.++++||+++| |+|||+ |++|.... +..++..+|.++|+++++++++||++||+.+++.+.... ...
T Consensus 87 ~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~------~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~~~~~~~ 159 (317)
T CHL00194 87 WDGKLALIEAAKAAK-IKRFIFFSILNAEQY------PYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLISQYAIPI 159 (317)
T ss_pred HHHHHHHHHHHHHcC-CCEEEEecccccccc------CCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhhhhhhhh
Confidence 457899999999999 999996 66654321 123567899999999999999999999998876543222 111
Q ss_pred CCCCCcEEEecCCCcccCCCCC-Chhhhhhhheee-cCCcccccCCCC
Q 026978 149 FESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLA-KGDSMNFELGED 194 (230)
Q Consensus 149 ~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~-~g~~~~~~~~~~ 194 (230)
.. +..+.+ +++++++..+.. |+...+...+.. ...+..|+++++
T Consensus 160 ~~-~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~ 205 (317)
T CHL00194 160 LE-KQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP 205 (317)
T ss_pred cc-CCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCC
Confidence 11 133333 445555554443 444333332211 112345777765
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=129.00 Aligned_cols=129 Identities=27% Similarity=0.360 Sum_probs=104.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--hhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--FLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--~~~~~~ll 78 (230)
|+++|+++||+|++++|+.+ |.+ . ..+++++.+|+.|++++.++++|+|+||++++... ....++++
T Consensus 14 l~~~L~~~~~~V~~~~R~~~------~~~---~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~~~~~ 82 (183)
T PF13460_consen 14 LAKQLLRRGHEVTALVRSPS------KAE---D--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAAKNII 82 (183)
T ss_dssp HHHHHHHTTSEEEEEESSGG------GHH---H--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEecCch------hcc---c--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccccccc
Confidence 57899999999999999854 222 1 57999999999999999999999999999998643 56789999
Q ss_pred HHHHHhCCcceEec-ccccccCCCCC----CCCch-hHHHHHHHHHHHHHHHcCCCEEEEeccccchhh
Q 026978 79 HAIKVAGNIKRFLP-SEFGCEEDKVR----PLPPF-EAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~-S~~g~~~~~~~----~~~p~-~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~ 141 (230)
++|+++| ++|+|. |..|....... ...+. ..++..|...|+.+++++++||++||+++++..
T Consensus 83 ~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 83 EAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTT
T ss_pred ccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCC
Confidence 9999999 999885 65554332211 01121 357789999999999999999999999998863
|
... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=139.22 Aligned_cols=208 Identities=19% Similarity=0.167 Sum_probs=132.6
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCe-EEEEecCCCHHHHHHHhcCCCEEEEcCCCC--------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGV-TIIEGELDEHKKIVSILKEVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv-~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-------- 69 (230)
||++|+++| ++|++++|...... . ..+...+. +++.||++|.++|.+|++|+|+|||+++..
T Consensus 13 iv~~Ll~~g~~~~Vr~~d~~~~~~~----~---~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~ 85 (280)
T PF01073_consen 13 IVRQLLERGYIYEVRVLDRSPPPKF----L---KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPWGDYPP 85 (280)
T ss_pred HHHHHHHCCCceEEEEccccccccc----c---hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccccCcccH
Confidence 589999999 89999998765321 0 11223344 499999999999999999999999998753
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cc---ccc-----c---CCCCCCC--CchhHHHHHHHHHHHHHHH-cC--
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGC-----E---EDKVRPL--PPFEAYLEKKRIVRRAIEA-AQ-- 126 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~-----~---~~~~~~~--~p~~~~~~~K~~~e~~l~~-~g-- 126 (230)
++.+++||++||+++| |||||+ |+ ++. + .++..+. .+...|..+|..+|+.+.+ .+
T Consensus 86 ~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~ 164 (280)
T PF01073_consen 86 EEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSE 164 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccc
Confidence 3679999999999999 999996 43 222 0 1122221 2334677999999998865 22
Q ss_pred ------CCEEEEeccccchhhcccc----cCCCCCCCcEEEecCCCcccC-CCCCChhhhhhhheee-cCCcccccCCCC
Q 026978 127 ------IPYTFVSANLCGAYFVNVL----LRPFESHDDVVVYGSGEAKAL-PPPEDIPISIMHSLLA-KGDSMNFELGED 194 (230)
Q Consensus 127 ------l~~tilr~g~~~~~~~~~~----~~~~~~~~~~~i~g~G~~~~~-~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 194 (230)
|..++|||+..++.....+ ....+.+......|+|+.... .+.+|+..+....... .........+|-
T Consensus 165 ~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~ 244 (280)
T PF01073_consen 165 LKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQ 244 (280)
T ss_pred cccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCc
Confidence 8899999988887654322 121121235667788876653 3445666555443311 000001122221
Q ss_pred cchhcccCCCCcccc-HHHHHHHhhCC
Q 026978 195 DIEASKLYPDFKFTT-IDQLLDIFLID 220 (230)
Q Consensus 195 ~~~~~~l~p~~~~~t-~~e~l~~~~~~ 220 (230)
+-- .-|-+... +.||+..++.-
T Consensus 245 ---~y~-itd~~p~~~~~~f~~~~~~~ 267 (280)
T PF01073_consen 245 ---AYF-ITDGEPVPSFWDFMRPLWEA 267 (280)
T ss_pred ---EEE-EECCCccCcHHHHHHHHHHH
Confidence 111 23444555 88998887743
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=139.52 Aligned_cols=183 Identities=19% Similarity=0.222 Sum_probs=123.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~------- 69 (230)
|+++|+++||+|++++|+.++.........+.. ...+++++.+|++|.+++.++++ ++|+||||++..
T Consensus 76 l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~ 154 (390)
T PLN02657 76 VVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDS 154 (390)
T ss_pred HHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccc
Confidence 478999999999999998653210000000001 13579999999999999999998 599999998742
Q ss_pred ---ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--cCCCEEEEeccccchhhcc
Q 026978 70 ---QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--AQIPYTFVSANLCGAYFVN 143 (230)
Q Consensus 70 ---~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--~gl~~tilr~g~~~~~~~~ 143 (230)
++.+..+++++|+++| ++|||. |+.+.. .|...+..+|..+|+.+++ ++++||+|||+.|++.+..
T Consensus 155 ~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~-------~p~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~ 226 (390)
T PLN02657 155 WKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ-------KPLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGG 226 (390)
T ss_pred hhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc-------CcchHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHH
Confidence 2456889999999999 999985 544322 1334677899999999986 8999999999998865322
Q ss_pred cccCCCCCCCcEEEecCCCccc-CCCCCChhhhhhhheee--cCCcccccCCC
Q 026978 144 VLLRPFESHDDVVVYGSGEAKA-LPPPEDIPISIMHSLLA--KGDSMNFELGE 193 (230)
Q Consensus 144 ~~~~~~~~~~~~~i~g~G~~~~-~~~~~~~~~~~~~~~~~--~g~~~~~~~~~ 193 (230)
.+-.+.. ++.+.++|+|+.+. .++..+.++.++..... ...+..+++++
T Consensus 227 ~~~~~~~-g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Igg 278 (390)
T PLN02657 227 QVEIVKD-GGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGG 278 (390)
T ss_pred HHHhhcc-CCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCC
Confidence 1111122 36777899998754 45555444433333221 11234566665
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=132.92 Aligned_cols=147 Identities=12% Similarity=0.129 Sum_probs=106.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh------cC-CCEEEEcCCCC--Ch
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL------KE-VDVVISTVAYP--QF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al------~g-~D~Vi~~~~~~--~~ 71 (230)
++++|+++||+|++++|+.+.. ...+++.+.+|++|+++|.+++ +| +|.|+|+.+.. ..
T Consensus 15 vv~~L~~~g~~V~~~~R~~~~~------------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~~ 82 (285)
T TIGR03649 15 IARLLQAASVPFLVASRSSSSS------------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDLA 82 (285)
T ss_pred HHHHHHhCCCcEEEEeCCCccc------------cCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCChh
Confidence 4789999999999999986532 1357888999999999999999 68 99999998753 24
Q ss_pred hhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCEEEEeccccchhhcccc-c-C
Q 026978 72 LDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAA-QIPYTFVSANLCGAYFVNVL-L-R 147 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~-gl~~tilr~g~~~~~~~~~~-~-~ 147 (230)
....++++||+++| |+|||+ |+.+.... .+ .+..+++++++. |++||+|||++|++.+...+ . .
T Consensus 83 ~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~-----~~------~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~ 150 (285)
T TIGR03649 83 PPMIKFIDFARSKG-VRRFVLLSASIIEKG-----GP------AMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEA 150 (285)
T ss_pred HHHHHHHHHHHHcC-CCEEEEeeccccCCC-----Cc------hHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccc
Confidence 57889999999999 999997 44443211 01 244567888885 99999999999998753221 1 1
Q ss_pred CCCCCCcEEEecCCCcccCCCCCChh
Q 026978 148 PFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 148 ~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
+.. ....+.+.|+.++..+..+.+
T Consensus 151 ~~~--~~~~~~~~g~~~~~~v~~~Dv 174 (285)
T TIGR03649 151 IRK--ENKIYSATGDGKIPFVSADDI 174 (285)
T ss_pred ccc--CCeEEecCCCCccCcccHHHH
Confidence 222 223445677777666655443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.2e-16 Score=128.73 Aligned_cols=124 Identities=18% Similarity=0.366 Sum_probs=102.6
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC----------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP---------- 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~---------- 69 (230)
|.+|++.||+|+++++-.++.. + .+...-+++++||+.|.+.|.+.|+ .+|+|||+++..
T Consensus 17 v~~Ll~~G~~vvV~DNL~~g~~-----~---~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl 88 (329)
T COG1087 17 VRQLLKTGHEVVVLDNLSNGHK-----I---ALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPL 88 (329)
T ss_pred HHHHHHCCCeEEEEecCCCCCH-----H---HhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHH
Confidence 6799999999999999876642 1 2211126899999999999999998 679999999974
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEeccc----ccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEE
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLPSE----FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFV 132 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~S~----~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~til 132 (230)
|+.++.+|++||+++| |++||+|+ ||.+. .+..++.|.+||.++|+.+|+.|+. .+++++++
T Consensus 89 ~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~L 167 (329)
T COG1087 89 KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVIL 167 (329)
T ss_pred HHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEE
Confidence 4678999999999999 99999753 88643 4556777888999999999999975 68999999
Q ss_pred ec
Q 026978 133 SA 134 (230)
Q Consensus 133 r~ 134 (230)
|.
T Consensus 168 RY 169 (329)
T COG1087 168 RY 169 (329)
T ss_pred Ee
Confidence 83
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.6e-16 Score=133.41 Aligned_cols=190 Identities=12% Similarity=0.060 Sum_probs=126.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hh---hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KE---FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~---l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------- 69 (230)
|+++|+++|++|++++|...... . ....+ .. .....++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 31 lv~~L~~~g~~V~~~d~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~ 108 (348)
T PRK15181 31 LLEELLFLNQTVIGLDNFSTGYQ-H-NLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLK 108 (348)
T ss_pred HHHHHHHCCCEEEEEeCCCCcch-h-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhh
Confidence 57899999999999998654321 0 00000 00 011357899999999999999999999999999853
Q ss_pred --------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+|+++|++.| ++|||. | .||... .+..+..|..+|..+|..+|.+++. .++++
T Consensus 109 ~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 187 (348)
T PRK15181 109 DPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNA 187 (348)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCE
Confidence 2468899999999999 999985 3 377421 1222334666788999999987754 58999
Q ss_pred EEEeccccchhhc----------cccc-CCCCCCCcEEEecCCCcccCCCCC-ChhhhhhhheeecC---CcccccCCCC
Q 026978 130 TFVSANLCGAYFV----------NVLL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLAKG---DSMNFELGED 194 (230)
Q Consensus 130 tilr~g~~~~~~~----------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g---~~~~~~~~~~ 194 (230)
+++||+..++... +.++ .... ++.+.++|+|++++.-+.. |++.++....-..+ ....|++++.
T Consensus 188 ~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~-~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g 266 (348)
T PRK15181 188 IGLRYFNVFGRRQNPNGAYSAVIPRWILSLLK-DEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVG 266 (348)
T ss_pred EEEEecceeCcCCCCCCccccCHHHHHHHHHc-CCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCC
Confidence 9999987776431 1111 1122 3678899999987754444 45555443221111 2234777643
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2e-15 Score=127.27 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=104.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
||+.||++||.|++.+|+++.. .|.+.+..|+ ....+++.+|+.|.+++.+|++|||.|||++++..
T Consensus 22 ivk~LL~rGY~V~gtVR~~~~~---k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~ 98 (327)
T KOG1502|consen 22 IVKLLLSRGYTVRGTVRDPEDE---KKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEK 98 (327)
T ss_pred HHHHHHhCCCEEEEEEcCcchh---hhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHH
Confidence 5899999999999999998753 3544566664 23489999999999999999999999999999752
Q ss_pred ------hhhHHHHHHHHHHhCCcceEec-cccccc------CCCCCCC-C-----c------hhHHHHHHHHHHHHH---
Q 026978 71 ------FLDQLEIVHAIKVAGNIKRFLP-SEFGCE------EDKVRPL-P-----P------FEAYLEKKRIVRRAI--- 122 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~------~~~~~~~-~-----p------~~~~~~~K~~~e~~l--- 122 (230)
+.+++|+++||+++.+|||+|. |+...- ....... + + ...|..+|..+|+..
T Consensus 99 ~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~f 178 (327)
T KOG1502|consen 99 ELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEF 178 (327)
T ss_pred hhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5689999999999888999986 443211 1110000 0 0 124557888877654
Q ss_pred -HHcCCCEEEEeccccchhhc
Q 026978 123 -EAAQIPYTFVSANLCGAYFV 142 (230)
Q Consensus 123 -~~~gl~~tilr~g~~~~~~~ 142 (230)
++.+++.+.|.|+..++.++
T Consensus 179 a~e~~~~lv~inP~lV~GP~l 199 (327)
T KOG1502|consen 179 AKENGLDLVTINPGLVFGPGL 199 (327)
T ss_pred HHhCCccEEEecCCceECCCc
Confidence 45789999999998887654
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-15 Score=114.93 Aligned_cols=168 Identities=21% Similarity=0.237 Sum_probs=113.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-------hhh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------FLD 73 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------~~~ 73 (230)
|+++++++||+|++++|++++.. . .+++.+++.|+.|++++.+.+.|+|+||++.+... ...
T Consensus 16 i~~EA~~RGHeVTAivRn~~K~~---------~--~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~~k~ 84 (211)
T COG2910 16 ILKEALKRGHEVTAIVRNASKLA---------A--RQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDELHSKS 84 (211)
T ss_pred HHHHHHhCCCeeEEEEeChHhcc---------c--cccceeecccccChhhhHhhhcCCceEEEeccCCCCChhHHHHHH
Confidence 46889999999999999976431 1 26899999999999999999999999999988651 345
Q ss_pred HHHHHHHHHHhCCcceEec-ccccc---cCC-C--CCCCCchhHHH-HHHHHHH--HHHHH-cCCCEEEEeccccchhhc
Q 026978 74 QLEIVHAIKVAGNIKRFLP-SEFGC---EED-K--VRPLPPFEAYL-EKKRIVR--RAIEA-AQIPYTFVSANLCGAYFV 142 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr~v~-S~~g~---~~~-~--~~~~~p~~~~~-~~K~~~e--~~l~~-~gl~~tilr~g~~~~~~~ 142 (230)
...|+++.+.+| +.|++. .+-|. +.. . ..|..|. +|+ ..+...+ +.|+. .+++||++.|..++..+.
T Consensus 85 ~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~-ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe 162 (211)
T COG2910 85 IEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPA-EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGE 162 (211)
T ss_pred HHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCch-hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCcc
Confidence 677899999999 999763 22222 111 1 1222232 454 3444444 56665 569999999999988743
Q ss_pred ccc-cCCCCCCCcEEEecCCCccc--CCCCCChhhhhhhheeec
Q 026978 143 NVL-LRPFESHDDVVVYGSGEAKA--LPPPEDIPISIMHSLLAK 183 (230)
Q Consensus 143 ~~~-~~~~~~~~~~~i~g~G~~~~--~~~~~~~~~~~~~~~~~~ 183 (230)
... +.+.. +.+..-..|+.++ .+++..++.++.+..+.+
T Consensus 163 rTg~yrlgg--D~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 163 RTGNYRLGG--DQLLVNAKGESRISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred ccCceEecc--ceEEEcCCCceeeeHHHHHHHHHHHHhcccccc
Confidence 222 33333 5566666676665 455555555555554443
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.4e-15 Score=127.66 Aligned_cols=165 Identities=16% Similarity=0.140 Sum_probs=115.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|++.|+++||+|++++|...... + .. ..+++++.+|++|.+.+.++++++|+|||+++..
T Consensus 37 l~~~L~~~G~~V~~v~r~~~~~~-~-------~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~ 107 (370)
T PLN02695 37 IARRLKAEGHYIIASDWKKNEHM-S-------ED-MFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHS 107 (370)
T ss_pred HHHHHHhCCCEEEEEEecccccc-c-------cc-cccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCch
Confidence 57889999999999999643211 1 10 1246889999999999999999999999999642
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-c---cccccC--------CCC--CCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE--------DKV--RPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~--------~~~--~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
++.+..+|+++|++.+ +|+||+ | .||... .+. .+..|...|..+|..+|+.++. .|
T Consensus 108 ~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g 186 (370)
T PLN02695 108 VIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFG 186 (370)
T ss_pred hhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999999999 999985 3 366321 111 1445666788999999987754 69
Q ss_pred CCEEEEeccccchhhc----------cccc-CCCCCCCcEEEecCCCcccCCCCC-Chhhh
Q 026978 127 IPYTFVSANLCGAYFV----------NVLL-RPFESHDDVVVYGSGEAKALPPPE-DIPIS 175 (230)
Q Consensus 127 l~~tilr~g~~~~~~~----------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~ 175 (230)
++++++|++..++... +.++ .+...+..+.++|+|++++..+.. |++..
T Consensus 187 ~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~a 247 (370)
T PLN02695 187 IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEG 247 (370)
T ss_pred CCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHH
Confidence 9999999987776421 0111 111112678899999988765544 44433
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=127.72 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=111.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-Ccc-hHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RPS-KLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p~-k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|+++|+++||+|++++|+..... .+. ....+..+...|++++.+|+.|.+.+. +..++|+|||+.+. ...++.+|+
T Consensus 72 lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~~d~Vi~~~~~-~~~~~~~ll 149 (378)
T PLN00016 72 LAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAGFDVVYDNNGK-DLDEVEPVA 149 (378)
T ss_pred HHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCCccEEEeCCCC-CHHHHHHHH
Confidence 57899999999999999865321 000 000111233457999999998743333 23589999999764 567889999
Q ss_pred HHHHHhCCcceEec-cc---ccccC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcc-----cc
Q 026978 79 HAIKVAGNIKRFLP-SE---FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVN-----VL 145 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~-----~~ 145 (230)
+||+++| |+|||. |+ ||... .+..+..|. .+|..+|+++++.+++||++||+.+++.... .+
T Consensus 150 ~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~----~sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~ 224 (378)
T PLN00016 150 DWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPK----AGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWF 224 (378)
T ss_pred HHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCCc----chHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHH
Confidence 9999999 999985 43 44321 111222221 2799999999999999999999988875321 11
Q ss_pred c-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 146 L-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 146 ~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
+ .+.. ++.+.++|+|++.+..+.. |+...+.
T Consensus 225 ~~~~~~-~~~i~~~g~g~~~~~~i~v~Dva~ai~ 257 (378)
T PLN00016 225 FDRLVR-GRPVPIPGSGIQLTQLGHVKDLASMFA 257 (378)
T ss_pred HHHHHc-CCceeecCCCCeeeceecHHHHHHHHH
Confidence 1 1222 2567788999877655544 4443333
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=119.45 Aligned_cols=136 Identities=14% Similarity=0.072 Sum_probs=100.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+..... ...+..+. ...++++.+|++|.+++.++++++|+|||+++..
T Consensus 26 l~~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 101 (342)
T PLN02214 26 IVKILLERGYTVKGTVRNPDDPK----NTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVE 101 (342)
T ss_pred HHHHHHHCcCEEEEEeCCchhhh----HHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHH
Confidence 57899999999999999754211 01111221 1358899999999999999999999999999864
Q ss_pred -ChhhHHHHHHHHHHhCCcceEec-cc----ccccC-------CCCC------CCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 -QFLDQLEIVHAIKVAGNIKRFLP-SE----FGCEE-------DKVR------PLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 -~~~~~~~ll~Aa~~ag~Vkr~v~-S~----~g~~~-------~~~~------~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
++.++.+++++|+++| ++|||. |+ ||... ++.. +..|...|..+|..+|+++.. .|
T Consensus 102 ~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g 180 (342)
T PLN02214 102 PAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKG 180 (342)
T ss_pred HHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcC
Confidence 2568999999999999 999885 32 54211 1111 112445678999999998864 59
Q ss_pred CCEEEEeccccchhh
Q 026978 127 IPYTFVSANLCGAYF 141 (230)
Q Consensus 127 l~~tilr~g~~~~~~ 141 (230)
++++++||+..++..
T Consensus 181 ~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 181 VDLVVLNPVLVLGPP 195 (342)
T ss_pred CcEEEEeCCceECCC
Confidence 999999998887753
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-14 Score=117.20 Aligned_cols=163 Identities=22% Similarity=0.348 Sum_probs=119.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~--------- 69 (230)
|+++|+++|+.|++++|...... .... ..+++++.+|+.|.+.+.+++++. |+|||+++..
T Consensus 14 l~~~l~~~g~~v~~~~~~~~~~~-------~~~~-~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 85 (236)
T PF01370_consen 14 LVRQLLKKGHEVIVLSRSSNSES-------FEEK-KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDP 85 (236)
T ss_dssp HHHHHHHTTTEEEEEESCSTGGH-------HHHH-HTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSH
T ss_pred HHHHHHHcCCccccccccccccc-------cccc-cceEEEEEeeccccccccccccccCceEEEEeecccccccccccc
Confidence 57899999999999999865321 0111 238999999999999999999977 9999999874
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTF 131 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ti 131 (230)
++..+.+++++|++.+ ++|||. | .||... ++..+..|..+|..+|...|+++++ .++++++
T Consensus 86 ~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~ 164 (236)
T PF01370_consen 86 EEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVTI 164 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred cccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2467899999999999 888884 3 366431 2223334666788999999998875 5899999
Q ss_pred Eeccccchhh---cc-c-----cc-CCCCCCCcEEEecCCCcccCCCCCChh
Q 026978 132 VSANLCGAYF---VN-V-----LL-RPFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 132 lr~g~~~~~~---~~-~-----~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
+||+..++.. .. . ++ .+.. ++++.++|+|++.+.-++.+.+
T Consensus 165 ~R~~~vyG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~ 215 (236)
T PF01370_consen 165 LRPPNVYGPGNPNNNSSSFLPSLIRQALK-GKPIKIPGDGSQVRDFIHVDDL 215 (236)
T ss_dssp EEESEEESTTSSSSSTSSHHHHHHHHHHT-TSSEEEESTSSCEEEEEEHHHH
T ss_pred ccccccccccccccccccccchhhHHhhc-CCcccccCCCCCccceEEHHHH
Confidence 9999888766 11 1 11 1222 2669999999987755554433
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-13 Score=121.79 Aligned_cols=176 Identities=15% Similarity=0.118 Sum_probs=116.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-Cc---c-------hHhhhh---hhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RP---S-------KLEIHK---EFQGIGVTIIEGELDEHKKIVSILK--EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p---~-------k~~~l~---~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~ 64 (230)
|+++|+++|++|++++|...... .+ + ..+.+. .....+++++.+|++|.+.+.++++ ++|+|||
T Consensus 63 Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViH 142 (442)
T PLN02572 63 TALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVH 142 (442)
T ss_pred HHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 58899999999999876432110 00 0 000111 1112368999999999999999998 4899999
Q ss_pred cCCCC------------------ChhhHHHHHHHHHHhCCcc-eEec-c---cccccC---CC-----------C---CC
Q 026978 65 TVAYP------------------QFLDQLEIVHAIKVAGNIK-RFLP-S---EFGCEE---DK-----------V---RP 104 (230)
Q Consensus 65 ~~~~~------------------~~~~~~~ll~Aa~~ag~Vk-r~v~-S---~~g~~~---~~-----------~---~~ 104 (230)
+++.. ++.++.+++++|++.| ++ |||. | .||... ++ . .+
T Consensus 143 lAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~ 221 (442)
T PLN02572 143 FGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYP 221 (442)
T ss_pred CCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCcccccccccccccccccCC
Confidence 98542 2457899999999999 86 8874 3 377421 11 0 13
Q ss_pred CCchhHHHHHHHHHHHHHHH----cCCCEEEEeccccchhhcc-----------------------ccc-CCCCCCCcEE
Q 026978 105 LPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANLCGAYFVN-----------------------VLL-RPFESHDDVV 156 (230)
Q Consensus 105 ~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~~~~-----------------------~~~-~~~~~~~~~~ 156 (230)
..|..+|..+|...|.+++. .|++++++|++..++.... .++ .... ++.+.
T Consensus 222 ~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~-g~~i~ 300 (442)
T PLN02572 222 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAV-GHPLT 300 (442)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhc-CCCce
Confidence 45656788999999987754 5999999999877764311 001 1111 25678
Q ss_pred EecCCCcccCCCC-CChhhhhhh
Q 026978 157 VYGSGEAKALPPP-EDIPISIMH 178 (230)
Q Consensus 157 i~g~G~~~~~~~~-~~~~~~~~~ 178 (230)
++|+|++.+.-+. .|++.++..
T Consensus 301 v~g~G~~~Rdfi~V~Dva~a~~~ 323 (442)
T PLN02572 301 VYGKGGQTRGFLDIRDTVRCIEI 323 (442)
T ss_pred ecCCCCEEECeEEHHHHHHHHHH
Confidence 8999998764443 355554443
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=120.79 Aligned_cols=169 Identities=17% Similarity=0.171 Sum_probs=114.0
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhh----cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l----~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------ 69 (230)
|+++|+++ |++|++++|+.... +.+... ...+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 30 lv~~L~~~~g~~V~~l~r~~~~~------~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~ 103 (386)
T PLN02427 30 LCEKLMTETPHKVLALDVYNDKI------KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYN 103 (386)
T ss_pred HHHHHHhcCCCEEEEEecCchhh------hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhh
Confidence 57889998 59999999874321 111111 12469999999999999999999999999999742
Q ss_pred ---------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCC----------------------CchhH
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPL----------------------PPFEA 110 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~----------------------~p~~~ 110 (230)
++.++.+++++|++++ +|||. | .||... .+..+. .|.++
T Consensus 104 ~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 181 (386)
T PLN02427 104 TRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWS 181 (386)
T ss_pred hChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccc
Confidence 1346789999999887 78874 3 366321 111110 12245
Q ss_pred HHHHHHHHHHHHHH----cCCCEEEEeccccchhhc-------------cccc-----CCCCCCCcEEEecCCCcccCCC
Q 026978 111 YLEKKRIVRRAIEA----AQIPYTFVSANLCGAYFV-------------NVLL-----RPFESHDDVVVYGSGEAKALPP 168 (230)
Q Consensus 111 ~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~~~-------------~~~~-----~~~~~~~~~~i~g~G~~~~~~~ 168 (230)
|..+|..+|+++.. .+++++++||+..++... +.++ .... ++.+.++|+|++.+..+
T Consensus 182 Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~g~g~~~r~~i 260 (386)
T PLN02427 182 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-REPLKLVDGGQSQRTFV 260 (386)
T ss_pred hHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhc-CCCeEEECCCCceECcE
Confidence 78999999999865 589999999987776421 1111 1112 26788899998877655
Q ss_pred CC-Chhhhhhh
Q 026978 169 PE-DIPISIMH 178 (230)
Q Consensus 169 ~~-~~~~~~~~ 178 (230)
.. |++.++..
T Consensus 261 ~V~Dva~ai~~ 271 (386)
T PLN02427 261 YIKDAIEAVLL 271 (386)
T ss_pred eHHHHHHHHHH
Confidence 54 44444443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=123.62 Aligned_cols=131 Identities=23% Similarity=0.288 Sum_probs=98.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc-----------CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ-----------GIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~-----------~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+... ++.+. .+. ..+++++.+|+.|.+++.+++.++|+|||++|.
T Consensus 96 LAr~LLk~G~~Vval~Rn~ek------l~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiDiVVn~AG~ 169 (576)
T PLN03209 96 TVRELLKLGFRVRAGVRSAQR------AESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGA 169 (576)
T ss_pred HHHHHHHCCCeEEEEeCCHHH------HHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCCCEEEEcccc
Confidence 578999999999999998532 22111 110 124889999999999999999999999999986
Q ss_pred C-------------ChhhHHHHHHHHHHhCCcceEec-ccccccCCC--CCCCCchhHHHHHHHHHHHHHHHcCCCEEEE
Q 026978 69 P-------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDK--VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFV 132 (230)
Q Consensus 69 ~-------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~--~~~~~p~~~~~~~K~~~e~~l~~~gl~~til 132 (230)
. ++.++.+|+++|+++| ++|||. |+.|..... .........+...|..++++|+.+||+|++|
T Consensus 170 ~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~L~~sGIrvTIV 248 (576)
T PLN03209 170 SEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEALIASGLPYTIV 248 (576)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4 2357899999999999 999985 555542111 0111122356678999999999999999999
Q ss_pred eccccc
Q 026978 133 SANLCG 138 (230)
Q Consensus 133 r~g~~~ 138 (230)
|||++.
T Consensus 249 RPG~L~ 254 (576)
T PLN03209 249 RPGGME 254 (576)
T ss_pred ECCeec
Confidence 999875
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-13 Score=114.63 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=117.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hh---cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l---~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~----- 69 (230)
|+++|+++|++|++++|+..... .++.+.+. .. ...+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 16 l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~ 94 (343)
T TIGR01472 16 LAEFLLEKGYEVHGLIRRSSSFN-TQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVS 94 (343)
T ss_pred HHHHHHHCCCEEEEEecCCcccc-hhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchh
Confidence 57899999999999999854210 01111110 00 024689999999999999999995 59999999853
Q ss_pred ----------ChhhHHHHHHHHHHhCCcc---eEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ----------QFLDQLEIVHAIKVAGNIK---RFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ----------~~~~~~~ll~Aa~~ag~Vk---r~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.++.+++++|+++| ++ |||. | .||.. .++..+..|..+|..+|..+|.+++.
T Consensus 95 ~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 173 (343)
T TIGR01472 95 FEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREA 173 (343)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 1347899999999998 74 7774 3 37742 22334455667888999999998864
Q ss_pred cCCCEEEEec-cccchh----hcccc----c-CCCCCCC-cEEEecCCCcccCCCCC-ChhhhhhhheeecCCcccccCC
Q 026978 125 AQIPYTFVSA-NLCGAY----FVNVL----L-RPFESHD-DVVVYGSGEAKALPPPE-DIPISIMHSLLAKGDSMNFELG 192 (230)
Q Consensus 125 ~gl~~tilr~-g~~~~~----~~~~~----~-~~~~~~~-~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 192 (230)
.+++++..|+ +.+... +.... + .+.. ++ ...++|+|++.+.-+.. |++.++...+. .+....|+++
T Consensus 174 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~-~~~~~~yni~ 251 (343)
T TIGR01472 174 YGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKL-GLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQ-QDKPDDYVIA 251 (343)
T ss_pred hCCceEEEeecccCCCCCCccccchHHHHHHHHHHc-CCCCceeeCCCccccCceeHHHHHHHHHHHHh-cCCCccEEec
Confidence 5788877664 222211 11110 1 1111 12 34567999887754444 55555444332 1221246666
Q ss_pred C
Q 026978 193 E 193 (230)
Q Consensus 193 ~ 193 (230)
+
T Consensus 252 ~ 252 (343)
T TIGR01472 252 T 252 (343)
T ss_pred C
Confidence 4
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.2e-13 Score=114.82 Aligned_cols=189 Identities=14% Similarity=0.170 Sum_probs=120.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~-------- 69 (230)
|+++|+++|++|+++.+..... . +...+..+ ....++++.+|+.|.+++.+++++ +|+|||+++..
T Consensus 17 l~~~L~~~g~~~v~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~ 93 (355)
T PRK10217 17 LVRYIINETSDAVVVVDKLTYA--G-NLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDG 93 (355)
T ss_pred HHHHHHHcCCCEEEEEecCccc--c-chhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhC
Confidence 5789999999866554432211 0 00011111 123578899999999999999984 89999999753
Q ss_pred -------ChhhHHHHHHHHHH---------hCCcceEec-c---ccccc------CCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 -------QFLDQLEIVHAIKV---------AGNIKRFLP-S---EFGCE------EDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~---------ag~Vkr~v~-S---~~g~~------~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.++.+++++|++ .+ +++||. | .||.. .++..+..|...|..+|..+|.+++
T Consensus 94 ~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~ 172 (355)
T PRK10217 94 PAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVR 172 (355)
T ss_pred hHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHH
Confidence 24678999999987 35 788874 3 36631 1223344466678899999988775
Q ss_pred H----cCCCEEEEeccccchhhc-c-c----cc-CCCCCCCcEEEecCCCcccCCCCC-ChhhhhhhheeecCCcccccC
Q 026978 124 A----AQIPYTFVSANLCGAYFV-N-V----LL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLAKGDSMNFEL 191 (230)
Q Consensus 124 ~----~gl~~tilr~g~~~~~~~-~-~----~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 191 (230)
. .+++++++||+.+++... + . ++ .... ++.+.++|+|++++..+.. |++.++...+........|++
T Consensus 173 ~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~~~~yni 251 (355)
T PRK10217 173 AWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALA-GKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNI 251 (355)
T ss_pred HHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhc-CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCCCCeEEe
Confidence 3 689999999988776442 1 1 11 1111 2567889999988766655 444443332221111234677
Q ss_pred CCC
Q 026978 192 GED 194 (230)
Q Consensus 192 ~~~ 194 (230)
++.
T Consensus 252 ~~~ 254 (355)
T PRK10217 252 GGH 254 (355)
T ss_pred CCC
Confidence 654
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-13 Score=111.71 Aligned_cols=185 Identities=18% Similarity=0.224 Sum_probs=126.4
Q ss_pred HHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC-------
Q 026978 2 VKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP------- 69 (230)
Q Consensus 2 v~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~------- 69 (230)
|+.++++. ++|++++.-.-.. ..+.+..+.. +..++++||+.|.+.+.++++ ..|+|+|.|+-+
T Consensus 17 vr~~~~~~~d~~v~~~DkLTYAg----n~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~ 92 (340)
T COG1088 17 VRYILNKHPDDHVVNLDKLTYAG----NLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSID 92 (340)
T ss_pred HHHHHhcCCCceEEEEecccccC----CHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEechhcccccccc
Confidence 56667664 4577777654322 2234444433 589999999999999999999 589999999865
Q ss_pred --------ChhhHHHHHHHHHHhCCcc-eEec-c---ccccc------CCCCCCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 --------QFLDQLEIVHAIKVAGNIK-RFLP-S---EFGCE------EDKVRPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vk-r~v~-S---~~g~~------~~~~~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
|+.++.+|+||+++.. .+ ||+. | .||.- .++.++..|.+||..+|.....++++ .|
T Consensus 93 ~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYg 171 (340)
T COG1088 93 GPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYG 171 (340)
T ss_pred ChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC
Confidence 3568999999999987 54 7875 4 37742 12556778888999999887776665 79
Q ss_pred CCEEEEeccccch-hh-----ccccc--CCCCCCCcEEEecCCCcccC-CCCCChhhhhhhheeecCC-cccccCCCC
Q 026978 127 IPYTFVSANLCGA-YF-----VNVLL--RPFESHDDVVVYGSGEAKAL-PPPEDIPISIMHSLLAKGD-SMNFELGED 194 (230)
Q Consensus 127 l~~tilr~g~~~~-~~-----~~~~~--~~~~~~~~~~i~g~G~~~~~-~~~~~~~~~~~~~~~~~g~-~~~~~~~~~ 194 (230)
||.++.||+--++ +. .|.++ .+. |++++++|+|.+.+. .+.+|-..++..-+ .+|. ..+++|||.
T Consensus 172 lp~~ItrcSNNYGPyqfpEKlIP~~I~nal~--g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl-~kg~~GE~YNIgg~ 246 (340)
T COG1088 172 LPATITRCSNNYGPYQFPEKLIPLMIINALL--GKPLPVYGDGLQIRDWLYVEDHCRAIDLVL-TKGKIGETYNIGGG 246 (340)
T ss_pred CceEEecCCCCcCCCcCchhhhHHHHHHHHc--CCCCceecCCcceeeeEEeHhHHHHHHHHH-hcCcCCceEEeCCC
Confidence 9999999865444 22 22222 233 389999999998763 44445444433322 2232 345788766
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.3e-13 Score=116.04 Aligned_cols=167 Identities=19% Similarity=0.189 Sum_probs=112.8
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC-CHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD-EHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~-d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++ ||+|++++|+.... .. .+...+++++.+|+. |.+.+.++++++|+|||+++..
T Consensus 17 l~~~L~~~~~~~V~~~~r~~~~~------~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p 88 (347)
T PRK11908 17 LSKRILETTDWEVYGMDMQTDRL------GD--LVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQP 88 (347)
T ss_pred HHHHHHhCCCCeEEEEeCcHHHH------HH--hccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCc
Confidence 57888886 69999999864211 11 112347999999997 7888999999999999998742
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCC-C------CCchhHHHHHHHHHHHHHHH----
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVR-P------LPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~-~------~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.++.+|+++|++.+ +|||. | .||... .+.. + ..|.++|..+|..+|++++.
T Consensus 89 ~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 166 (347)
T PRK11908 89 LRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME 166 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 1457889999999987 57774 3 366321 1111 1 12445688999999988864
Q ss_pred cCCCEEEEeccccchhhcc--------------ccc-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhhh
Q 026978 125 AQIPYTFVSANLCGAYFVN--------------VLL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIMH 178 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~~--------------~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~ 178 (230)
.+++++++|++.+++.... .++ .+.. ++.+.++|+|++++.-+.. |++..+..
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~g~~~r~~i~v~D~a~a~~~ 235 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GEPISLVDGGSQKRAFTDIDDGIDALMK 235 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhC-CCceEEecCCceeeccccHHHHHHHHHH
Confidence 6899999999777664310 111 1112 3667888999887755554 44444443
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=126.20 Aligned_cols=168 Identities=15% Similarity=0.177 Sum_probs=114.9
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHh--cCCCEEEEcCCCCC-----
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSIL--KEVDVVISTVAYPQ----- 70 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al--~g~D~Vi~~~~~~~----- 70 (230)
|+++|+++ ||+|++++|..... +.+.+... ...+++++.+|++|.+.+..++ .++|+|||+++...
T Consensus 22 lv~~Ll~~g~~~~V~~~d~~~~~~----~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~ 97 (668)
T PLN02260 22 VANRLIRNYPDYKIVVLDKLDYCS----NLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSF 97 (668)
T ss_pred HHHHHHHhCCCCEEEEEeCCCccc----hhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhh
Confidence 57889987 68899998853211 11111111 1357999999999998888776 58999999998642
Q ss_pred ----------hhhHHHHHHHHHHhCCcceEec-c---cccccC-------CCCCCCCchhHHHHHHHHHHHHHHH----c
Q 026978 71 ----------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE-------DKVRPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 71 ----------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~-------~~~~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
+.++.+|+++|++.|+++|||. | .||... .+..+..|..+|..+|..+|++++. .
T Consensus 98 ~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~ 177 (668)
T PLN02260 98 GNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177 (668)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 3568999999999876899985 3 266421 1222334556788999999998864 5
Q ss_pred CCCEEEEeccccchhhc------ccccC-CCCCCCcEEEecCCCcccCCCCCChh
Q 026978 126 QIPYTFVSANLCGAYFV------NVLLR-PFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~------~~~~~-~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
+++++++|++..++... +.++. ... ++.+.++|+|++.+..++.+.+
T Consensus 178 ~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~-g~~i~i~g~g~~~r~~ihV~Dv 231 (668)
T PLN02260 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQ-GKPLPIHGDGSNVRSYLYCEDV 231 (668)
T ss_pred CCCEEEECcccccCcCCCcccHHHHHHHHHhC-CCCeEEecCCCceEeeEEHHHH
Confidence 89999999987776431 11111 111 3678899999987766655433
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-13 Score=114.24 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=101.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++| +|++++|... .+.+|++|.+.+.++++ ++|+||||++...
T Consensus 16 l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~ 74 (299)
T PRK09987 16 LQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEP 74 (299)
T ss_pred HHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCH
Confidence 477899999 6999887521 23589999999999999 5799999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSAN 135 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g 135 (230)
+.++.+|+++|++.| + +||+ |+ ||.. .++..+..|..+|..+|..+|++++....+++++|++
T Consensus 75 ~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~ 152 (299)
T PRK09987 75 EFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTS 152 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecc
Confidence 346889999999999 6 5764 32 6532 2334455676778899999999998877889999998
Q ss_pred ccchhhc----ccccC-CCCCCCcEEEecC--CCc
Q 026978 136 LCGAYFV----NVLLR-PFESHDDVVVYGS--GEA 163 (230)
Q Consensus 136 ~~~~~~~----~~~~~-~~~~~~~~~i~g~--G~~ 163 (230)
+.++... +.++. +.. ++.+.++|| |..
T Consensus 153 ~vyGp~~~~~~~~~~~~~~~-~~~~~v~~d~~g~~ 186 (299)
T PRK09987 153 WVYAGKGNNFAKTMLRLAKE-REELSVINDQFGAP 186 (299)
T ss_pred eecCCCCCCHHHHHHHHHhc-CCCeEEeCCCcCCC
Confidence 8886432 11221 112 367888988 544
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.7e-13 Score=113.01 Aligned_cols=168 Identities=14% Similarity=0.219 Sum_probs=112.3
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~------ 69 (230)
|+++|+++| ++|++++|...... .++. ..+ ...+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 15 l~~~l~~~~~~~~v~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~ 90 (317)
T TIGR01181 15 FVRYILNEHPDAEVIVLDKLTYAGN-LENL---ADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSI 90 (317)
T ss_pred HHHHHHHhCCCCEEEEecCCCcchh-hhhh---hhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhh
Confidence 478899887 78998887532111 1111 122 124789999999999999999998 89999999853
Q ss_pred ---------ChhhHHHHHHHHHHhCCcc-eEec-cc---cccc-----CCCCCCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIK-RFLP-SE---FGCE-----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vk-r~v~-S~---~g~~-----~~~~~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
++.+..+++++|++.+ ++ ++|. |+ ||.. ..+..+..|...|..+|..+|.+++. .+
T Consensus 91 ~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 169 (317)
T TIGR01181 91 SGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYG 169 (317)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence 2346789999999976 44 7774 32 5532 12223334555688999999988763 68
Q ss_pred CCEEEEeccccchhhc------cccc-CCCCCCCcEEEecCCCcccCCCCCChhh
Q 026978 127 IPYTFVSANLCGAYFV------NVLL-RPFESHDDVVVYGSGEAKALPPPEDIPI 174 (230)
Q Consensus 127 l~~tilr~g~~~~~~~------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~~ 174 (230)
++++++||+..++... +.++ .+.. ++.+.++|+|++.+..++.+.+.
T Consensus 170 ~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~D~a 223 (317)
T TIGR01181 170 LPALITRCSNNYGPYQFPEKLIPLMITNALA-GKPLPVYGDGQQVRDWLYVEDHC 223 (317)
T ss_pred CCeEEEEeccccCCCCCcccHHHHHHHHHhc-CCCceEeCCCceEEeeEEHHHHH
Confidence 9999999987776321 1111 1222 25678889998776665554433
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.7e-13 Score=125.81 Aligned_cols=166 Identities=18% Similarity=0.184 Sum_probs=113.5
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHH-HHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKK-IVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~-L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++ ||+|++++|...... . .+...+++++.||++|.+. +.++++++|+|||+++..
T Consensus 331 Lv~~Ll~~~g~~V~~l~r~~~~~~------~--~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~ 402 (660)
T PRK08125 331 LTERLLRDDNYEVYGLDIGSDAIS------R--FLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNP 402 (660)
T ss_pred HHHHHHhCCCcEEEEEeCCchhhh------h--hcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCH
Confidence 57889985 799999999754211 0 1123579999999998655 678899999999999743
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCC------C-CchhHHHHHHHHHHHHHHH----
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRP------L-PPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~------~-~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.++.++++||+++| +|||+ | .||... ++..+ . .|.+.|..+|..+|++++.
T Consensus 403 ~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~ 480 (660)
T PRK08125 403 LRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK 480 (660)
T ss_pred HHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh
Confidence 2467899999999988 67874 3 377421 22211 1 1334688999999998864
Q ss_pred cCCCEEEEeccccchhhcc--------------ccc-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 125 AQIPYTFVSANLCGAYFVN--------------VLL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~~--------------~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
.|++++++||+.+++.... .++ .+.. ++.+.++|+|++++..+.. |++..+.
T Consensus 481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~-~~~i~~~g~g~~~rd~i~v~Dva~a~~ 548 (660)
T PRK08125 481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLVDGGKQKRCFTDIRDGIEALF 548 (660)
T ss_pred cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcC-CCCeEEeCCCceeeceeeHHHHHHHHH
Confidence 5899999999877764310 111 1222 3677888999888765544 4444443
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.2e-13 Score=112.81 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=98.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.... .+.+.+..+. ..+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 20 l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 96 (322)
T PLN02662 20 LVKLLLQRGYTVKATVRDPNDP---KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQA 96 (322)
T ss_pred HHHHHHHCCCEEEEEEcCCCch---hhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHH
Confidence 5789999999999999975432 1111111111 2368999999999999999999999999999742
Q ss_pred -----ChhhHHHHHHHHHHh-CCcceEec-cc-----ccccC-------CCCCCCCch------hHHHHHHHHHHHHHH-
Q 026978 70 -----QFLDQLEIVHAIKVA-GNIKRFLP-SE-----FGCEE-------DKVRPLPPF------EAYLEKKRIVRRAIE- 123 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~a-g~Vkr~v~-S~-----~g~~~-------~~~~~~~p~------~~~~~~K~~~e~~l~- 123 (230)
++.++.+++++|+++ + ++|||. |+ ||... ++..+..|. ..|..+|..+|++++
T Consensus 97 ~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~ 175 (322)
T PLN02662 97 ELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWK 175 (322)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHH
Confidence 246789999999998 8 999985 33 33211 111122231 357789999998765
Q ss_pred ---HcCCCEEEEeccccchhh
Q 026978 124 ---AAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~~~ 141 (230)
+.+++++++||+.+++..
T Consensus 176 ~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 176 FAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred HHHHcCCcEEEEeCCcccCCC
Confidence 369999999998887653
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.5e-13 Score=112.65 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=97.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.+.. ++...+.... ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 21 l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 97 (322)
T PLN02986 21 IVKLLLLRGYTVKATVRDLTDR---KKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQT 97 (322)
T ss_pred HHHHHHHCCCEEEEEECCCcch---HHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchh
Confidence 5788999999999999976532 1211111111 2368999999999999999999999999999852
Q ss_pred -----ChhhHHHHHHHHHHh-CCcceEec-ccc-----ccc-------CCCCCCCC------chhHHHHHHHHHHHHHHH
Q 026978 70 -----QFLDQLEIVHAIKVA-GNIKRFLP-SEF-----GCE-------EDKVRPLP------PFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~a-g~Vkr~v~-S~~-----g~~-------~~~~~~~~------p~~~~~~~K~~~e~~l~~ 124 (230)
++.++.+++++|++. + ++|||. |+. |.. .++..... +...|..+|..+|+++++
T Consensus 98 ~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~ 176 (322)
T PLN02986 98 ELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWE 176 (322)
T ss_pred hhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHH
Confidence 145789999999985 7 999985 332 211 01111111 224577899999876653
Q ss_pred ----cCCCEEEEeccccchhh
Q 026978 125 ----AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~~ 141 (230)
.+++++++||+..++..
T Consensus 177 ~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 177 FAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred HHHHhCCeEEEEcccceeCCC
Confidence 69999999999888653
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=106.14 Aligned_cols=132 Identities=22% Similarity=0.338 Sum_probs=94.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC-HHHHHHHh-cCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE-HKKIVSIL-KEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d-~~~L~~al-~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.+.. +.+.. ...+++++.+|++| .+.+.+++ .++|+||++++..
T Consensus 33 l~~~L~~~g~~V~~~~R~~~~~------~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~ 105 (251)
T PLN00141 33 IVEQLLAKGFAVKAGVRDVDKA------KTSLP-QDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPW 105 (251)
T ss_pred HHHHHHhCCCEEEEEecCHHHH------HHhcc-cCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCce
Confidence 4688999999999999985421 11100 12469999999998 57888888 7999999998753
Q ss_pred --ChhhHHHHHHHHHHhCCcceEec-ccc---cccCCCC-CCC----CchhHHHHHHHHHHHHHHHcCCCEEEEeccccc
Q 026978 70 --QFLDQLEIVHAIKVAGNIKRFLP-SEF---GCEEDKV-RPL----PPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCG 138 (230)
Q Consensus 70 --~~~~~~~ll~Aa~~ag~Vkr~v~-S~~---g~~~~~~-~~~----~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~ 138 (230)
+..+..++++++++.| ++|||. |+. |...... .+. .+...++..|..+|++++++|++||+||||+++
T Consensus 106 ~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~ 184 (251)
T PLN00141 106 KVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLT 184 (251)
T ss_pred eeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCcc
Confidence 1346899999999999 999886 443 3211110 000 111123467889999999999999999999887
Q ss_pred hh
Q 026978 139 AY 140 (230)
Q Consensus 139 ~~ 140 (230)
+.
T Consensus 185 ~~ 186 (251)
T PLN00141 185 ND 186 (251)
T ss_pred CC
Confidence 53
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=111.30 Aligned_cols=168 Identities=20% Similarity=0.243 Sum_probs=116.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC-CEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV-DVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~-D~Vi~~~~~~---------- 69 (230)
|+++|+++||+|++++|...... .+. .+++++.+|++|.+.+.++++++ |+|||+++..
T Consensus 16 l~~~L~~~g~~V~~~~r~~~~~~---------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~ 85 (314)
T COG0451 16 LVERLLAAGHDVRGLDRLRDGLD---------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDP 85 (314)
T ss_pred HHHHHHhCCCeEEEEeCCCcccc---------ccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCH
Confidence 57899999999999999865432 111 57899999999999999999999 9999999864
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cc---cccc-----CCCC-CCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE-----EDKV-RPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~-----~~~~-~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+++++|+++| ++|||. |+ ++.. .++. .+..|..+|..+|..+|+.++. .|+++
T Consensus 86 ~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~ 164 (314)
T COG0451 86 AEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPV 164 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 1357899999999999 999986 33 3322 1222 2334555688999999999876 36999
Q ss_pred EEEeccccchhhcc-----cc----c-CCCCCCCc-EEEecCCCcccCCC-CCChhhhhhhhe
Q 026978 130 TFVSANLCGAYFVN-----VL----L-RPFESHDD-VVVYGSGEAKALPP-PEDIPISIMHSL 180 (230)
Q Consensus 130 tilr~g~~~~~~~~-----~~----~-~~~~~~~~-~~i~g~G~~~~~~~-~~~~~~~~~~~~ 180 (230)
+++||+.+++.... .+ + .+.. +.. +.+.++|+..+.-+ ..|++..+...+
T Consensus 165 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 226 (314)
T COG0451 165 VILRPFNVYGPGDKPDLSSGVVSAFIRQLLK-GEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226 (314)
T ss_pred EEEeeeeeeCCCCCCCCCcCcHHHHHHHHHh-CCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence 99999877764321 11 1 1222 133 56677877764333 234444444433
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2e-12 Score=110.43 Aligned_cols=131 Identities=19% Similarity=0.302 Sum_probs=99.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++|++|++++|+..... .+...+++++.+|++|.+++.++++++|+|||+++..
T Consensus 16 l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 86 (328)
T TIGR03466 16 VVRLLLEQGEEVRVLVRPTSDRR---------NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMY 86 (328)
T ss_pred HHHHHHHCCCEEEEEEecCcccc---------ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCCCHHHHH
Confidence 47889999999999999754321 2224579999999999999999999999999998642
Q ss_pred --ChhhHHHHHHHHHHhCCcceEec-cc---cccc-----CCCCCCCCc---hhHHHHHHHHHHHHHHH----cCCCEEE
Q 026978 70 --QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE-----EDKVRPLPP---FEAYLEKKRIVRRAIEA----AQIPYTF 131 (230)
Q Consensus 70 --~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~-----~~~~~~~~p---~~~~~~~K~~~e~~l~~----~gl~~ti 131 (230)
++.++.+++++|++.+ ++|||. |+ ||.. .++..+..| ...|..+|..+|+.+++ .++++++
T Consensus 87 ~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i 165 (328)
T TIGR03466 87 AANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVI 165 (328)
T ss_pred HHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 2457899999999999 999885 32 5531 122222222 23577899999988765 5899999
Q ss_pred Eeccccchhh
Q 026978 132 VSANLCGAYF 141 (230)
Q Consensus 132 lr~g~~~~~~ 141 (230)
+||+.+++..
T Consensus 166 lR~~~~~G~~ 175 (328)
T TIGR03466 166 VNPSTPIGPR 175 (328)
T ss_pred EeCCccCCCC
Confidence 9998887643
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=114.72 Aligned_cols=180 Identities=18% Similarity=0.223 Sum_probs=115.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
|+++|+++||+|++++|...... ++ +..+ ...+++++.+|+.+. ++.++|+|||+++..
T Consensus 136 Lv~~Ll~~G~~V~~ldr~~~~~~--~~---~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~ 205 (436)
T PLN02166 136 LVDKLIGRGDEVIVIDNFFTGRK--EN---LVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPV 205 (436)
T ss_pred HHHHHHHCCCEEEEEeCCCCccH--hH---hhhhccCCceEEEECccccc-----cccCCCEEEECceeccchhhccCHH
Confidence 57899999999999998754321 11 1111 124688999998764 457899999999742
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCC-----CCCCchhHHHHHHHHHHHHHHH----cCC
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKV-----RPLPPFEAYLEKKRIVRRAIEA----AQI 127 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~-----~~~~p~~~~~~~K~~~e~~l~~----~gl 127 (230)
|+.++.+|+++|+++| + |||. | .||... ++. .+..|...|..+|..+|++++. .++
T Consensus 206 ~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l 283 (436)
T PLN02166 206 KTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGV 283 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 2567899999999999 6 6774 3 376421 121 2333445688999999998764 589
Q ss_pred CEEEEeccccchhhc--------cccc-CCCCCCCcEEEecCCCcccCCCCC-ChhhhhhhheeecCCcccccCCCC
Q 026978 128 PYTFVSANLCGAYFV--------NVLL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLAKGDSMNFELGED 194 (230)
Q Consensus 128 ~~tilr~g~~~~~~~--------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 194 (230)
+++++|++..++... +.++ .+.. ++.+.++|+|++.+..+.. |++.++...+ .++....|++++.
T Consensus 284 ~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~-~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~-~~~~~giyNIgs~ 358 (436)
T PLN02166 284 EVRIARIFNTYGPRMCLDDGRVVSNFVAQTIR-KQPMTVYGDGKQTRSFQYVSDLVDGLVALM-EGEHVGPFNLGNP 358 (436)
T ss_pred CeEEEEEccccCCCCCCCccchHHHHHHHHhc-CCCcEEeCCCCeEEeeEEHHHHHHHHHHHH-hcCCCceEEeCCC
Confidence 999999877776431 1111 1111 2678889999887754444 4444433322 1222224666643
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.2e-12 Score=110.17 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=98.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
|+++|+++|++|++++|+..... +...+..+.. ..++++.+|++|.+++.++++++|+|||+++..
T Consensus 25 l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~ 101 (338)
T PLN00198 25 LIKLLLQKGYAVNTTVRDPENQK---KIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPEND 101 (338)
T ss_pred HHHHHHHCCCEEEEEECCCCCHH---HHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHH
Confidence 57899999999999999864321 1111111211 258899999999999999999999999999842
Q ss_pred ----ChhhHHHHHHHHHHh-CCcceEec-c---cccccC--------CCC---------CCCCchhHHHHHHHHHHHHHH
Q 026978 70 ----QFLDQLEIVHAIKVA-GNIKRFLP-S---EFGCEE--------DKV---------RPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~a-g~Vkr~v~-S---~~g~~~--------~~~---------~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.++.+++++|++. + ++|||. | .||... ++. ....|..+|..+|..+|.+++
T Consensus 102 ~~~~nv~g~~~ll~a~~~~~~-~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 180 (338)
T PLN00198 102 MIKPAIQGVHNVLKACAKAKS-VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAW 180 (338)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHH
Confidence 145678999999886 6 899885 3 265321 110 112345568899999998776
Q ss_pred H----cCCCEEEEeccccchhh
Q 026978 124 A----AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 124 ~----~gl~~tilr~g~~~~~~ 141 (230)
. .+++++++||+..++..
T Consensus 181 ~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 181 KFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred HHHHhcCceEEEEeCCceECCC
Confidence 4 68999999998887753
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.1e-12 Score=110.80 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=96.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++|++|++++|+..... +...+..+. ...++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~ 97 (351)
T PLN02650 21 LVMRLLERGYTVRATVRDPANVK---KVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPEN 97 (351)
T ss_pred HHHHHHHCCCEEEEEEcCcchhH---HHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchh
Confidence 57899999999999999754321 111111110 1247899999999999999999999999999743
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-cc---ccccC------CCCC---------CCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE------DKVR---------PLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~------~~~~---------~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.++.+++++|++.+.++|||. |+ ++... ++.. +..|..+|..+|..+|.+++.
T Consensus 98 ~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (351)
T PLN02650 98 EVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKY 177 (351)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHH
Confidence 14578999999999764789885 43 33210 1110 011334688999999987754
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|++++++||+..++.
T Consensus 178 ~~~~gi~~~ilRp~~v~Gp 196 (351)
T PLN02650 178 AAENGLDFISIIPTLVVGP 196 (351)
T ss_pred HHHcCCeEEEECCCceECC
Confidence 6999999999887764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-12 Score=114.53 Aligned_cols=164 Identities=20% Similarity=0.229 Sum_probs=108.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++|++|++++|...... ++ ....+...+++++.+|+.+. ++.++|+|||+++..
T Consensus 135 Lv~~Ll~~G~~V~~ld~~~~~~~--~~--~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~ 205 (442)
T PLN02206 135 LVDRLMARGDSVIVVDNFFTGRK--EN--VMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVK 205 (442)
T ss_pred HHHHHHHCcCEEEEEeCCCccch--hh--hhhhccCCceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHH
Confidence 57899999999999998643221 11 01112345789999999765 356899999999742
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCC-----CCCCchhHHHHHHHHHHHHHHH----cCCC
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKV-----RPLPPFEAYLEKKRIVRRAIEA----AQIP 128 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~-----~~~~p~~~~~~~K~~~e~~l~~----~gl~ 128 (230)
++.++.+|++||+++| + |||. | .||... ++. .+..+...|..+|..+|++++. .+++
T Consensus 206 ~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~ 283 (442)
T PLN02206 206 TIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVE 283 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCC
Confidence 2457899999999999 7 6774 3 366321 111 1222344678999999998754 6899
Q ss_pred EEEEeccccchhhc--------cccc--CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 129 YTFVSANLCGAYFV--------NVLL--RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 129 ~tilr~g~~~~~~~--------~~~~--~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
++++|++.+++... +.++ .+.. +.+.++|+|++.+..+.. |++..+.
T Consensus 284 ~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~--~~i~i~g~G~~~rdfi~V~Dva~ai~ 341 (442)
T PLN02206 284 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRK--EPLTVYGDGKQTRSFQFVSDLVEGLM 341 (442)
T ss_pred eEEEEeccccCCCCCccccchHHHHHHHHHcC--CCcEEeCCCCEEEeEEeHHHHHHHHH
Confidence 99999877765431 1111 1233 678899999887644433 4444443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.40 E-value=7e-12 Score=106.36 Aligned_cols=137 Identities=11% Similarity=0.026 Sum_probs=96.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.+... ..+.+..+. ..+++++.+|++|.+++.+++.++|.|+|+++..
T Consensus 22 lv~~Ll~~G~~V~~~~R~~~~~~---~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~ 98 (297)
T PLN02583 22 LVKRLLSRGYTVHAAVQKNGETE---IEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEK 98 (297)
T ss_pred HHHHHHhCCCEEEEEEcCchhhh---HHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCcccccHHH
Confidence 57899999999999999643211 111122221 2368999999999999999999999999986532
Q ss_pred ----ChhhHHHHHHHHHHh-CCcceEec-cc---c--ccc-------CCCCCCCCchh------HHHHHHHHHHHHHH--
Q 026978 70 ----QFLDQLEIVHAIKVA-GNIKRFLP-SE---F--GCE-------EDKVRPLPPFE------AYLEKKRIVRRAIE-- 123 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~a-g~Vkr~v~-S~---~--g~~-------~~~~~~~~p~~------~~~~~K~~~e~~l~-- 123 (230)
++.++.+++++|.+. + ++|||. |+ + +.. .++.....+.. .|..+|..+|+++.
T Consensus 99 ~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~ 177 (297)
T PLN02583 99 MVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWAL 177 (297)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 246899999999986 6 899885 33 2 211 01111111111 46689999999874
Q ss_pred --HcCCCEEEEeccccchhh
Q 026978 124 --AAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 124 --~~gl~~tilr~g~~~~~~ 141 (230)
..++++++|||+..++..
T Consensus 178 ~~~~gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 178 AMDRGVNMVSINAGLLMGPS 197 (297)
T ss_pred HHHhCCcEEEEcCCcccCCC
Confidence 369999999999888754
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-12 Score=122.75 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=91.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------ChhhH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------QFLDQ 74 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------~~~~~ 74 (230)
|+++|+++||+|++++|+.... + ..+++++.+|++|.+++.++++++|+|||+++.. ++.++
T Consensus 16 La~~Ll~~G~~Vv~l~R~~~~~-----------~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~vNv~GT 83 (854)
T PRK05865 16 LTARLLSQGHEVVGIARHRPDS-----------W-PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINIDGT 83 (854)
T ss_pred HHHHHHHCcCEEEEEECCchhh-----------c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHHHHHHHH
Confidence 4788999999999999974211 1 2468899999999999999999999999999764 35688
Q ss_pred HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhh
Q 026978 75 LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 75 ~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~ 141 (230)
.+++++|+++| ++|||. |+. .|.++|+++++++++++++||+.+++..
T Consensus 84 ~nLLeAa~~~g-vkr~V~iSS~------------------~K~aaE~ll~~~gl~~vILRp~~VYGP~ 132 (854)
T PRK05865 84 ANVLKAMAETG-TGRIVFTSSG------------------HQPRVEQMLADCGLEWVAVRCALIFGRN 132 (854)
T ss_pred HHHHHHHHHcC-CCeEEEECCc------------------HHHHHHHHHHHcCCCEEEEEeceEeCCC
Confidence 99999999999 999985 321 0888999998899999999999888653
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.3e-12 Score=109.80 Aligned_cols=169 Identities=11% Similarity=0.053 Sum_probs=112.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--------CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--------GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--------~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--- 69 (230)
|+++|+++||+|++++|+.+. .+.+..+. ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 69 lv~~L~~~G~~V~~~~r~~~~------~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~ 142 (367)
T PLN02686 69 IVDRLLRHGYSVRIAVDTQED------KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPA 142 (367)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhccEEEecCeeeccc
Confidence 578999999999999987432 11122221 1258899999999999999999999999998642
Q ss_pred ------------ChhhHHHHHHHHHHh-CCcceEec-cc-----ccc----c----CCCC------CCCCchhHHHHHHH
Q 026978 70 ------------QFLDQLEIVHAIKVA-GNIKRFLP-SE-----FGC----E----EDKV------RPLPPFEAYLEKKR 116 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~a-g~Vkr~v~-S~-----~g~----~----~~~~------~~~~p~~~~~~~K~ 116 (230)
++.++.++++||++. + |+|||. |+ ||. . .++. .+..|..+|..+|.
T Consensus 143 ~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~ 221 (367)
T PLN02686 143 GLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKL 221 (367)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHH
Confidence 245789999999986 7 999885 32 432 1 0111 11224456889999
Q ss_pred HHHHHHHH----cCCCEEEEeccccchhhcc----c-ccCCCCCCCcEEEecCCCcccCCCCCChhhhhhhh
Q 026978 117 IVRRAIEA----AQIPYTFVSANLCGAYFVN----V-LLRPFESHDDVVVYGSGEAKALPPPEDIPISIMHS 179 (230)
Q Consensus 117 ~~e~~l~~----~gl~~tilr~g~~~~~~~~----~-~~~~~~~~~~~~i~g~G~~~~~~~~~~~~~~~~~~ 179 (230)
.+|++++. .|+++++|||+..++.... . .+.... +...++|+|... .....|++.++...
T Consensus 222 ~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~--g~~~~~g~g~~~-~v~V~Dva~A~~~a 290 (367)
T PLN02686 222 KAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLK--GAQEMLADGLLA-TADVERLAEAHVCV 290 (367)
T ss_pred HHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhc--CCCccCCCCCcC-eEEHHHHHHHHHHH
Confidence 99998753 6899999999988875421 1 111112 235577877632 22234555555444
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.1e-12 Score=107.29 Aligned_cols=126 Identities=16% Similarity=0.230 Sum_probs=95.9
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC--------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-------- 69 (230)
|+++|+++| ++|++++|+.... ..+ +.+...+++++.+|++|.+++.++++++|+|||+++..
T Consensus 20 l~~~L~~~g~~~~V~~~~r~~~~~------~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~ 93 (324)
T TIGR03589 20 FISRLLENYNPKKIIIYSRDELKQ------WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYN 93 (324)
T ss_pred HHHHHHHhCCCcEEEEEcCChhHH------HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcC
Confidence 578899886 7899999874321 111 12222468999999999999999999999999999853
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCCEEEEec
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIPYTFVSA 134 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~ 134 (230)
++.++.+++++|++.| +++||. |+.. +..|..+|..+|..+|.+++. .|++++++||
T Consensus 94 ~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~-------~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~ 165 (324)
T TIGR03589 94 PFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK-------AANPINLYGATKLASDKLFVAANNISGSKGTRFSVVRY 165 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC-------CCCCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEee
Confidence 2357899999999999 999885 3321 112445788999999988753 5899999999
Q ss_pred cccchh
Q 026978 135 NLCGAY 140 (230)
Q Consensus 135 g~~~~~ 140 (230)
|.+++.
T Consensus 166 g~v~G~ 171 (324)
T TIGR03589 166 GNVVGS 171 (324)
T ss_pred cceeCC
Confidence 988863
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.3e-12 Score=108.08 Aligned_cols=171 Identities=13% Similarity=0.157 Sum_probs=111.5
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~------- 69 (230)
|+++|+++|++ |+++.|..... ..+.+..+. ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 16 l~~~L~~~g~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~ 91 (352)
T PRK10084 16 VVRHIINNTQDSVVNVDKLTYAG----NLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSIT 91 (352)
T ss_pred HHHHHHHhCCCeEEEecCCCccc----hHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhc
Confidence 57899999976 55555532111 111111121 2357889999999999999997 489999999853
Q ss_pred --------ChhhHHHHHHHHHHh---------CCcceEec-c---ccccc--------------CCCCCCCCchhHHHHH
Q 026978 70 --------QFLDQLEIVHAIKVA---------GNIKRFLP-S---EFGCE--------------EDKVRPLPPFEAYLEK 114 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~a---------g~Vkr~v~-S---~~g~~--------------~~~~~~~~p~~~~~~~ 114 (230)
++.++.+++++|++. + +++||. | .||.. ..+..+..|...|..+
T Consensus 92 ~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~s 170 (352)
T PRK10084 92 GPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSAS 170 (352)
T ss_pred CchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHH
Confidence 246899999999874 4 678874 3 36631 1122334566678899
Q ss_pred HHHHHHHHHH----cCCCEEEEeccccchhhc-c-cc----c-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 115 KRIVRRAIEA----AQIPYTFVSANLCGAYFV-N-VL----L-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 115 K~~~e~~l~~----~gl~~tilr~g~~~~~~~-~-~~----~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
|..+|.+++. .+++++++|++..++... + .+ + .... ++.+.++|+|++.+.-+.. |++..+.
T Consensus 171 K~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~v~v~D~a~a~~ 244 (352)
T PRK10084 171 KASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYGKGDQIRDWLYVEDHARALY 244 (352)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhc-CCCeEEeCCCCeEEeeEEHHHHHHHHH
Confidence 9999988764 589999999877766432 1 11 1 1122 2567889999987754444 4444443
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=106.71 Aligned_cols=159 Identities=23% Similarity=0.288 Sum_probs=109.1
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
||++|++.+ .++++++..+.... .+.+. ..+....++++.+|+.|..++..+++|+ +|+|+++..
T Consensus 20 lv~~L~~~~~~~~irv~D~~~~~~~--~~~e~-~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~ 95 (361)
T KOG1430|consen 20 LVQALLENELKLEIRVVDKTPTQSN--LPAEL-TGFRSGRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDR 95 (361)
T ss_pred HHHHHHhcccccEEEEeccCccccc--cchhh-hcccCCceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccch
Confidence 578899988 89999998765321 11111 1112567999999999999999999999 777777653
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cc----cc-cc---CCCCC--CCCchhHHHHHHHHHHHHHHHc----CCC
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SE----FG-CE---EDKVR--PLPPFEAYLEKKRIVRRAIEAA----QIP 128 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~----~g-~~---~~~~~--~~~p~~~~~~~K~~~e~~l~~~----gl~ 128 (230)
|+.++.+++++|+++| |+|+|+ |+ |+ .+ .++.. +.....+|..+|..+|++++++ ++.
T Consensus 96 ~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~ 174 (361)
T KOG1430|consen 96 DLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLY 174 (361)
T ss_pred hhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCee
Confidence 4789999999999999 999997 43 22 22 12222 2111125669999999998763 388
Q ss_pred EEEEeccccchhhcccc----cCCCCCCCcEEEecCCCcc
Q 026978 129 YTFVSANLCGAYFVNVL----LRPFESHDDVVVYGSGEAK 164 (230)
Q Consensus 129 ~tilr~g~~~~~~~~~~----~~~~~~~~~~~i~g~G~~~ 164 (230)
.+.|||...|+.+.+.+ ..+.+.+......|+++..
T Consensus 175 T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~ 214 (361)
T KOG1430|consen 175 TCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENL 214 (361)
T ss_pred EEEEccccccCCCCccccHHHHHHHHccCceEEeeccccc
Confidence 99999998888765443 1111113555666777543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.5e-11 Score=103.10 Aligned_cols=190 Identities=14% Similarity=0.124 Sum_probs=115.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh---hcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE---FQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~---l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~------ 69 (230)
|+++|+++|++|++++|+.+... ..+.+.+.. ....+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 22 l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~ 100 (340)
T PLN02653 22 LTEFLLSKGYEVHGIIRRSSNFN-TQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSF 100 (340)
T ss_pred HHHHHHHCCCEEEEEeccccccc-ccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhh
Confidence 57899999999999999754211 111111110 0123588999999999999999985 59999999863
Q ss_pred ---------ChhhHHHHHHHHHHhCCcc-----eEec-c---ccccc---CCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIK-----RFLP-S---EFGCE---EDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vk-----r~v~-S---~~g~~---~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.++.+++++|++.+ ++ +||. | .||.. .++..+..|...|..+|..+|.+++.
T Consensus 101 ~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 179 (340)
T PLN02653 101 EMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREA 179 (340)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 2347899999999998 76 7764 3 37742 22334455666788999999998864
Q ss_pred cCCCEEEEec-cccchh----hcccc----c-CCCCCCCcE-EEecCCCcccCCC-CCChhhhhhhheeecCCcccccCC
Q 026978 125 AQIPYTFVSA-NLCGAY----FVNVL----L-RPFESHDDV-VVYGSGEAKALPP-PEDIPISIMHSLLAKGDSMNFELG 192 (230)
Q Consensus 125 ~gl~~tilr~-g~~~~~----~~~~~----~-~~~~~~~~~-~i~g~G~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 192 (230)
.+++++..++ +.+... +.+.. + .+.. +... .++|+|++.+.-+ .+|++.++...+. .+....|+++
T Consensus 180 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~-~~~~~~yni~ 257 (340)
T PLN02653 180 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKV-GLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQ-QEKPDDYVVA 257 (340)
T ss_pred cCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHc-CCCCceEeCCCcceecceeHHHHHHHHHHHHh-cCCCCcEEec
Confidence 5776665553 222111 11111 1 1111 1333 4459998876543 3455555443332 1112236665
Q ss_pred CC
Q 026978 193 ED 194 (230)
Q Consensus 193 ~~ 194 (230)
+.
T Consensus 258 ~g 259 (340)
T PLN02653 258 TE 259 (340)
T ss_pred CC
Confidence 43
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.8e-11 Score=103.60 Aligned_cols=137 Identities=13% Similarity=0.126 Sum_probs=97.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+..... +...+.... ...++++.+|++|.+++.++++++|+|||+++..
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 97 (325)
T PLN02989 21 IVKLLLFRGYTINATVRDPKDRK---KTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQ 97 (325)
T ss_pred HHHHHHHCCCEEEEEEcCCcchh---hHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChH
Confidence 57899999999999998864321 111111111 1358899999999999999999999999999852
Q ss_pred ------ChhhHHHHHHHHHHh-CCcceEec-cc---cccc---------CCCCCCCCch------hHHHHHHHHHHHHHH
Q 026978 70 ------QFLDQLEIVHAIKVA-GNIKRFLP-SE---FGCE---------EDKVRPLPPF------EAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~a-g~Vkr~v~-S~---~g~~---------~~~~~~~~p~------~~~~~~K~~~e~~l~ 123 (230)
++.++.+++++|.+. + ++|||. |+ |+.. .++..+..|. .+|..+|..+|++++
T Consensus 98 ~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~ 176 (325)
T PLN02989 98 VELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAW 176 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHH
Confidence 145688999999885 5 789874 32 3321 1222222232 357789999998876
Q ss_pred H----cCCCEEEEeccccchhh
Q 026978 124 A----AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 124 ~----~gl~~tilr~g~~~~~~ 141 (230)
. .+++++++||+..++..
T Consensus 177 ~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 177 RFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred HHHHHcCCeEEEEcCCceeCCC
Confidence 4 68999999998887743
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.4e-11 Score=102.88 Aligned_cols=133 Identities=18% Similarity=0.297 Sum_probs=93.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|++|++++|..... ......+..+....++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~ 93 (338)
T PRK10675 16 TCVQLLQNGHDVVILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKP 93 (338)
T ss_pred HHHHHHHCCCeEEEEecCCCch--HhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCH
Confidence 5788999999999998754321 111111122223457889999999999999987 6899999987531
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---cccc----CCCCCCC-CchhHHHHHHHHHHHHHHH-----cCCCE
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----EDKVRPL-PPFEAYLEKKRIVRRAIEA-----AQIPY 129 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----~~~~~~~-~p~~~~~~~K~~~e~~l~~-----~gl~~ 129 (230)
+.+..+|+++|++.| +++||. |+ ||.. .++..+. .|..+|..+|..+|+++++ .++++
T Consensus 94 ~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 172 (338)
T PRK10675 94 LEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcE
Confidence 346789999999999 999885 32 5532 1222232 3556788999999998864 37889
Q ss_pred EEEeccc
Q 026978 130 TFVSANL 136 (230)
Q Consensus 130 tilr~g~ 136 (230)
+++|++.
T Consensus 173 ~ilR~~~ 179 (338)
T PRK10675 173 ALLRYFN 179 (338)
T ss_pred EEEEeee
Confidence 9999643
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.8e-11 Score=102.87 Aligned_cols=170 Identities=14% Similarity=0.155 Sum_probs=113.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~-------- 69 (230)
|+++|+++|++|++++|+.... + +. ...+. ...++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 20 l~~~L~~~G~~V~~~~r~~~~~--~-~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~ 94 (349)
T TIGR02622 20 LSLWLLELGAEVYGYSLDPPTS--P-NL--FELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYAD 94 (349)
T ss_pred HHHHHHHCCCEEEEEeCCCccc--h-hH--HHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhC
Confidence 5789999999999999976432 1 11 01111 23577899999999999999985 59999999852
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---ccccc-----CCCCCCCCchhHHHHHHHHHHHHHHH---------
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCE-----EDKVRPLPPFEAYLEKKRIVRRAIEA--------- 124 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~-----~~~~~~~~p~~~~~~~K~~~e~~l~~--------- 124 (230)
++.++.+++++|++.+.++|||. | .||.. ..+..+..|..+|..+|..+|.+++.
T Consensus 95 ~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 174 (349)
T TIGR02622 95 PLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVA 174 (349)
T ss_pred HHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccc
Confidence 24578999999998754688875 3 36532 12223344556788999999988764
Q ss_pred --cCCCEEEEeccccchhhc-------cccc-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 125 --AQIPYTFVSANLCGAYFV-------NVLL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~~~-------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
.+++++++||+.+++... +.++ .... +..+. +++|++.+.-++. |++.++.
T Consensus 175 ~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~-g~~~~-~~~g~~~rd~i~v~D~a~a~~ 236 (349)
T TIGR02622 175 NFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSS-NKIVI-IRNPDATRPWQHVLEPLSGYL 236 (349)
T ss_pred ccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhc-CCCeE-ECCCCcccceeeHHHHHHHHH
Confidence 289999999988886431 1111 1222 24444 5678776643443 5554444
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-11 Score=101.71 Aligned_cols=159 Identities=19% Similarity=0.323 Sum_probs=117.5
Q ss_pred CCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------------ChhhHHHHHHHHHHhCCcceEec-c---c
Q 026978 36 GIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP---------------QFLDQLEIVHAIKVAGNIKRFLP-S---E 94 (230)
Q Consensus 36 ~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~---------------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~ 94 (230)
.++-+++++|+.|...+...+. .+|.|+|.++.. ++.++..|+++++.+|++++||+ | .
T Consensus 56 ~p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeV 135 (331)
T KOG0747|consen 56 SPNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEV 135 (331)
T ss_pred CCCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccce
Confidence 4578999999999888888776 689999999865 24578999999999987999996 3 4
Q ss_pred ccccC-C----CCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEeccccchhh------cccccCCCCCCCcEEEec
Q 026978 95 FGCEE-D----KVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANLCGAYF------VNVLLRPFESHDDVVVYG 159 (230)
Q Consensus 95 ~g~~~-~----~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~~------~~~~~~~~~~~~~~~i~g 159 (230)
||... + +.+.+.|..||..+|.++|..+++ .+++++++|.+-.++.. .|.++.+...++..++.|
T Consensus 136 YGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g 215 (331)
T KOG0747|consen 136 YGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHG 215 (331)
T ss_pred ecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceec
Confidence 88421 1 334557888999999999999986 68999999987766532 233322122237889999
Q ss_pred CCCcccCCCCCChhhhhhhheeecCC-cccccCCCC
Q 026978 160 SGEAKALPPPEDIPISIMHSLLAKGD-SMNFELGED 194 (230)
Q Consensus 160 ~G~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~ 194 (230)
+|.+.+.-+..+.+.+....+..+|. ...++||..
T Consensus 216 ~g~~~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd 251 (331)
T KOG0747|consen 216 DGLQTRSYLYVEDVSEAFKAVLEKGELGEIYNIGTD 251 (331)
T ss_pred CcccceeeEeHHHHHHHHHHHHhcCCccceeeccCc
Confidence 99988765554444444555555677 567899876
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-11 Score=111.69 Aligned_cols=133 Identities=17% Similarity=0.158 Sum_probs=94.8
Q ss_pred CHHHHh--hCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCH------HHHHHHhcCCCEEEEcCCCC--
Q 026978 1 MVKASV--SSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEH------KKIVSILKEVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll--~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~------~~L~~al~g~D~Vi~~~~~~-- 69 (230)
|+++|+ ++|++|++++|+... .+.+.+. .+...+++++.+|++|+ +.+.++ +++|+||||++..
T Consensus 16 lv~~Ll~~~~g~~V~~l~R~~~~----~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~ 90 (657)
T PRK07201 16 LVSRLLDRRREATVHVLVRRQSL----SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDL 90 (657)
T ss_pred HHHHHHhcCCCCEEEEEECcchH----HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecC
Confidence 578888 589999999996432 1221111 11125799999999983 456655 9999999999853
Q ss_pred ----------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC---CCCC---CCCchhHHHHHHHHHHHHHHH-cCCC
Q 026978 70 ----------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE---DKVR---PLPPFEAYLEKKRIVRRAIEA-AQIP 128 (230)
Q Consensus 70 ----------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~---~~~~---~~~p~~~~~~~K~~~e~~l~~-~gl~ 128 (230)
++.++.+++++|++.| +++||. |+ ||... ++.. +..+..+|..+|..+|+++++ .+++
T Consensus 91 ~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~ 169 (657)
T PRK07201 91 TADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLP 169 (657)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCc
Confidence 3678999999999999 999985 32 44321 1111 112234688999999999985 7899
Q ss_pred EEEEeccccch
Q 026978 129 YTFVSANLCGA 139 (230)
Q Consensus 129 ~tilr~g~~~~ 139 (230)
++++||+..++
T Consensus 170 ~~ilRp~~v~G 180 (657)
T PRK07201 170 WRVYRPAVVVG 180 (657)
T ss_pred EEEEcCCeeee
Confidence 99999988876
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-11 Score=99.97 Aligned_cols=115 Identities=21% Similarity=0.250 Sum_probs=89.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|. .+|+.|.+++.++++++ |+|||+++...
T Consensus 15 l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 70 (287)
T TIGR01214 15 LVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDP 70 (287)
T ss_pred HHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCH
Confidence 578899999999999873 24788999999999987 99999998531
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSAN 135 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g 135 (230)
+.+..+++++|++.| + |||. |+ |+.. .++..+..|...|..+|..+|++++..+++++++||+
T Consensus 71 ~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~ 148 (287)
T TIGR01214 71 EKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNALIVRTS 148 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEEEEee
Confidence 346899999999998 6 6764 32 5431 1233334455678899999999999989999999999
Q ss_pred ccchhh
Q 026978 136 LCGAYF 141 (230)
Q Consensus 136 ~~~~~~ 141 (230)
.+++..
T Consensus 149 ~v~G~~ 154 (287)
T TIGR01214 149 WLYGGG 154 (287)
T ss_pred ecccCC
Confidence 887643
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-10 Score=97.92 Aligned_cols=129 Identities=18% Similarity=0.285 Sum_probs=97.9
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC--------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP-------- 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~-------- 69 (230)
+-+|+++|+.|.+++.-..... ...+.++.+.. .++.++++|+.|.+.|++.++ ..|.|+|.++..
T Consensus 19 ~l~L~~~gy~v~~vDNl~n~~~--~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~ 96 (343)
T KOG1371|consen 19 VLALLKRGYGVVIVDNLNNSYL--ESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMEN 96 (343)
T ss_pred HHHHHhCCCcEEEEecccccch--hHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhC
Confidence 4589999999999987654431 22233334433 789999999999999999999 679999999864
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEecc----cccccC----CCCCCCC-chhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLPS----EFGCEE----DKVRPLP-PFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~S----~~g~~~----~~~~~~~-p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+|+++|++.+ ++.+|.| .||.+. ++..+.. |..+|..+|..+|+.+.. .+...
T Consensus 97 p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~ 175 (343)
T KOG1371|consen 97 PLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGWKV 175 (343)
T ss_pred chhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccccceE
Confidence 3568999999999999 9999863 388642 3334444 667889999999999876 34556
Q ss_pred EEEe
Q 026978 130 TFVS 133 (230)
Q Consensus 130 tilr 133 (230)
+.||
T Consensus 176 ~~LR 179 (343)
T KOG1371|consen 176 TGLR 179 (343)
T ss_pred EEEE
Confidence 6666
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=100.88 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=95.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
|+++|+++|++|++++|+..... .....+. ..+++++.+|++|.+.+.++++++|+|||+++...
T Consensus 26 l~~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~ 100 (353)
T PLN02896 26 LVKLLLQRGYTVHATLRDPAKSL-----HLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNN 100 (353)
T ss_pred HHHHHHHCCCEEEEEeCChHHHH-----HHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccc
Confidence 57899999999999999753210 1111221 24688999999999999999999999999998531
Q ss_pred -------------hhhHHHHHHHHHHhCCcceEec-c---cccccC---------CCC--CCC-------CchhHHHHHH
Q 026978 71 -------------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE---------DKV--RPL-------PPFEAYLEKK 115 (230)
Q Consensus 71 -------------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~---------~~~--~~~-------~p~~~~~~~K 115 (230)
+.++.+|+++|++++.++|||. | .||... ++. .+. .|..+|..+|
T Consensus 101 ~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK 180 (353)
T PLN02896 101 IEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSK 180 (353)
T ss_pred hhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHH
Confidence 1457889999988743889885 3 365311 111 111 1223688999
Q ss_pred HHHHHHHHH----cCCCEEEEeccccchh
Q 026978 116 RIVRRAIEA----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 116 ~~~e~~l~~----~gl~~tilr~g~~~~~ 140 (230)
..+|++++. .+++.+++|++..++.
T Consensus 181 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp 209 (353)
T PLN02896 181 LLTEEAAFKYAKENGIDLVSVITTTVAGP 209 (353)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCcccCC
Confidence 999987754 6899999999777664
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-10 Score=97.94 Aligned_cols=134 Identities=22% Similarity=0.399 Sum_probs=96.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~-------- 69 (230)
|+++|+++|++|+++.|..... +.+. ..+. ..+++++.+|+.|.+++.++++ ++|+|||+++..
T Consensus 15 l~~~l~~~g~~V~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~ 89 (328)
T TIGR01179 15 TVRQLLESGHEVVVLDNLSNGS--PEAL---KRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQD 89 (328)
T ss_pred HHHHHHhCCCeEEEEeCCCccc--hhhh---hhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcC
Confidence 5788999999999887653321 1111 1111 1268899999999999999987 689999999753
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH-----cCCCE
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA-----AQIPY 129 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~-----~gl~~ 129 (230)
++.+..+++++|++.+ +++||. | .||... ++..+..|...|..+|..+|.+++. .++++
T Consensus 90 ~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~ 168 (328)
T TIGR01179 90 PLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSY 168 (328)
T ss_pred chhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCE
Confidence 2457889999999999 999885 3 255321 2223333555688999999988764 68999
Q ss_pred EEEeccccchh
Q 026978 130 TFVSANLCGAY 140 (230)
Q Consensus 130 tilr~g~~~~~ 140 (230)
+++|++.+++.
T Consensus 169 ~ilR~~~v~g~ 179 (328)
T TIGR01179 169 VILRYFNVAGA 179 (328)
T ss_pred EEEecCcccCC
Confidence 99999776654
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=96.81 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=95.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC------hhhH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ------FLDQ 74 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~------~~~~ 74 (230)
++++|+++||+|++++|+.... . .+. .+++++.+|+.|+.++..+++|+|.++++.+... ....
T Consensus 16 ~~~~L~~~~~~v~~~~r~~~~~------~---~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~~~~~~~ 85 (275)
T COG0702 16 VVRELLARGHEVRAAVRNPEAA------A---ALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQV 85 (275)
T ss_pred HHHHHHhCCCEEEEEEeCHHHH------H---hhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccchhHHHH
Confidence 5789999999999999986432 2 333 7899999999999999999999999998887432 2345
Q ss_pred HHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccch
Q 026978 75 LEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGA 139 (230)
Q Consensus 75 ~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~ 139 (230)
..+++++++++ .+++++. |.++.+... + ..+.++|..+|+.++++|++||++|++.|+.
T Consensus 86 ~~~~~~a~~a~~~~~~~~~~s~~~~~~~~-----~-~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~ 146 (275)
T COG0702 86 TAVVRAAEAAGAGVKHGVSLSVLGADAAS-----P-SALARAKAAVEAALRSSGIPYTTLRRAAFYL 146 (275)
T ss_pred HHHHHHHHHhcCCceEEEEeccCCCCCCC-----c-cHHHHHHHHHHHHHHhcCCCeEEEecCeeee
Confidence 55666666643 1677775 567654321 2 4778999999999999999999999766665
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-10 Score=97.93 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=88.4
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCC------
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~------ 69 (230)
|++.|+++|+ +|.++.|..... + +...+...+.+|+++.+.+..+.+ ++|+|||+++..
T Consensus 14 l~~~L~~~g~~~v~~~~~~~~~~----~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~ 83 (314)
T TIGR02197 14 LVKALNERGITDILVVDNLRDGH----K------FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETD 83 (314)
T ss_pred HHHHHHHcCCceEEEEecCCCch----h------hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccc
Confidence 4788999997 788887764321 1 111123467789988888877664 899999999753
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC---CCCCC-CCchhHHHHHHHHHHHHHHH------cCCC
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE---DKVRP-LPPFEAYLEKKRIVRRAIEA------AQIP 128 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~---~~~~~-~~p~~~~~~~K~~~e~~l~~------~gl~ 128 (230)
++.++.+|+++|++.+ + +||. |+ ||... .+..+ ..|...|..+|..+|+++++ .+++
T Consensus 84 ~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 161 (314)
T TIGR02197 84 GEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQ 161 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCc
Confidence 2467899999999999 7 6774 43 55311 11111 23555788999999998864 3578
Q ss_pred EEEEeccccchh
Q 026978 129 YTFVSANLCGAY 140 (230)
Q Consensus 129 ~tilr~g~~~~~ 140 (230)
++++|++..++.
T Consensus 162 ~~~lR~~~vyG~ 173 (314)
T TIGR02197 162 VVGLRYFNVYGP 173 (314)
T ss_pred eEEEEEeeccCC
Confidence 999999777664
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-10 Score=96.89 Aligned_cols=151 Identities=17% Similarity=0.101 Sum_probs=100.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|++.|+++||+|+++.+. ..+|+.|.++|.++++ ++|+|||+++..
T Consensus 13 l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 69 (306)
T PLN02725 13 IVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTY 69 (306)
T ss_pred HHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhC
Confidence 578899999998766431 0369999999999988 469999999642
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCC----CCCchh-HHHHHHHHHHHHHH----Hc
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVR----PLPPFE-AYLEKKRIVRRAIE----AA 125 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~----~~~p~~-~~~~~K~~~e~~l~----~~ 125 (230)
++.++.+|+++|++.+ ++|||. | .||... ++.. +..|.. .|..+|..+|++++ ..
T Consensus 70 ~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~ 148 (306)
T PLN02725 70 PADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY 148 (306)
T ss_pred cHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 2347899999999999 999885 3 366321 1111 223333 37789999987664 36
Q ss_pred CCCEEEEeccccchhhcc----------ccc-----CCCCCCCcEEE-ecCCCcccCCCCC-Chhhhh
Q 026978 126 QIPYTFVSANLCGAYFVN----------VLL-----RPFESHDDVVV-YGSGEAKALPPPE-DIPISI 176 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~----------~~~-----~~~~~~~~~~i-~g~G~~~~~~~~~-~~~~~~ 176 (230)
+++++++||+.+++.... .++ .... +..+.+ +|+|++.+..++. |++..+
T Consensus 149 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~Dv~~~~ 215 (306)
T PLN02725 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKAN-GAPEVVVWGSGSPLREFLHVDDLADAV 215 (306)
T ss_pred CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhc-CCCeEEEcCCCCeeeccccHHHHHHHH
Confidence 899999999888775321 011 0111 234444 7889887765555 444443
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.1e-10 Score=98.15 Aligned_cols=134 Identities=15% Similarity=0.199 Sum_probs=94.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh---cCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l---~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~------ 69 (230)
|+++|+++|++|++++|..... ....+.+... ...+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~ 98 (352)
T PLN02240 21 TVLQLLLAGYKVVVIDNLDNSS--EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESV 98 (352)
T ss_pred HHHHHHHCCCEEEEEeCCCcch--HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccc
Confidence 5788999999999999864321 0001111111 12468899999999999999987 689999999752
Q ss_pred ---------ChhhHHHHHHHHHHhCCcceEec-cc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHH-----cCC
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA-----AQI 127 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~-----~gl 127 (230)
++.++.+++++|++.+ +++||. |+ ||.. .++..+..|..+|..+|..+|++++. .++
T Consensus 99 ~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~ 177 (352)
T PLN02240 99 AKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEW 177 (352)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1457889999999999 999885 33 5532 12333445556788999999998863 367
Q ss_pred CEEEEecccc
Q 026978 128 PYTFVSANLC 137 (230)
Q Consensus 128 ~~tilr~g~~ 137 (230)
+.+++|+...
T Consensus 178 ~~~~~R~~~v 187 (352)
T PLN02240 178 KIILLRYFNP 187 (352)
T ss_pred CEEEEeecCc
Confidence 8888996433
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.5e-11 Score=99.92 Aligned_cols=125 Identities=16% Similarity=0.232 Sum_probs=83.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC---CHHH-HHHHhc-----CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD---EHKK-IVSILK-----EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~---d~~~-L~~al~-----g~D~Vi~~~~~~-- 69 (230)
|+++|+++|++|+++.|+..... + . ..+..+|+. +.++ +.++++ ++|+|||+++..
T Consensus 15 l~~~L~~~g~~~v~~~~~~~~~~---~------~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~ 81 (308)
T PRK11150 15 IVKALNDKGITDILVVDNLKDGT---K------F----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST 81 (308)
T ss_pred HHHHHHhCCCceEEEecCCCcch---H------H----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC
Confidence 57899999998888877643210 0 0 112234444 4444 344443 689999998732
Q ss_pred -----------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 -----------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
++.++.+|+++|++.+ + +||. |+ ||... ++..+..|..+|..+|..+|+++++ .+
T Consensus 82 ~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 159 (308)
T PRK11150 82 TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEAN 159 (308)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 2457899999999999 7 4764 43 66421 2223344656788999999988765 58
Q ss_pred CCEEEEeccccchh
Q 026978 127 IPYTFVSANLCGAY 140 (230)
Q Consensus 127 l~~tilr~g~~~~~ 140 (230)
++++++|++..++.
T Consensus 160 ~~~~~lR~~~vyG~ 173 (308)
T PRK11150 160 SQICGFRYFNVYGP 173 (308)
T ss_pred CCEEEEeeeeecCC
Confidence 99999999877764
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=101.43 Aligned_cols=134 Identities=19% Similarity=0.240 Sum_probs=91.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHH-HHHhc----CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKI-VSILK----EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L-~~al~----g~D~Vi~~~~~~----- 69 (230)
+++.|+++||.|++++|+..... + .+. .+...+.+.+..+.....++ ..... +..+|+.+++..
T Consensus 95 iv~~llkrgf~vra~VRd~~~a~---~--~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed 169 (411)
T KOG1203|consen 95 IVKILLKRGFSVRALVRDEQKAE---D--LLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPEEED 169 (411)
T ss_pred HHHHHHHCCCeeeeeccChhhhh---h--hhcccccccccceeeeccccccchhhhhhhhccccceeEEecccCCCCccc
Confidence 57899999999999999865431 1 111 12345677777776543332 22222 455777777653
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCc---hhHHHHHHHHHHHHHHHcCCCEEEEeccccc
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPP---FEAYLEKKRIVRRAIEAAQIPYTFVSANLCG 138 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p---~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~ 138 (230)
+..+++|+++||+.+| |+||+. +++|...... +... ......+|+.++++++++|++||+||+|.+.
T Consensus 170 ~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~-~~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~ 247 (411)
T KOG1203|consen 170 IVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQ-PPNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLE 247 (411)
T ss_pred CCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCC-CchhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccc
Confidence 2468999999999999 999885 6666432211 1101 1123478999999999999999999999988
Q ss_pred hhh
Q 026978 139 AYF 141 (230)
Q Consensus 139 ~~~ 141 (230)
+..
T Consensus 248 ~~~ 250 (411)
T KOG1203|consen 248 QDT 250 (411)
T ss_pred cCC
Confidence 743
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1e-09 Score=99.38 Aligned_cols=176 Identities=14% Similarity=0.170 Sum_probs=112.9
Q ss_pred CHHHHhhCCC---eEEEEEcCCCCCCCcc-hHh-hhh-----------------hhcCCCeEEEEecCC-------CHHH
Q 026978 1 MVKASVSSGH---KTFVYARPVTQNSRPS-KLE-IHK-----------------EFQGIGVTIIEGELD-------EHKK 51 (230)
Q Consensus 1 lv~~Ll~~g~---~V~~l~R~~~~~~~p~-k~~-~l~-----------------~l~~~gv~vv~gD~~-------d~~~ 51 (230)
|++.||+.+. .|.+++|...... +. +.+ .+. .+....++++.||++ |.+.
T Consensus 27 ll~~LL~~~~~v~~I~~LvR~~~~~~-~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~ 105 (491)
T PLN02996 27 FVEKILRVQPNVKKLYLLLRASDAKS-ATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNL 105 (491)
T ss_pred HHHHHHhhCCCCCEEEEEEeCCCCCC-HHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHHH
Confidence 4678887653 5789999875432 21 110 000 000157899999998 5566
Q ss_pred HHHHhcCCCEEEEcCCCC------------ChhhHHHHHHHHHHh-CCcceEec-c---cccccCC---C-CCC------
Q 026978 52 IVSILKEVDVVISTVAYP------------QFLDQLEIVHAIKVA-GNIKRFLP-S---EFGCEED---K-VRP------ 104 (230)
Q Consensus 52 L~~al~g~D~Vi~~~~~~------------~~~~~~~ll~Aa~~a-g~Vkr~v~-S---~~g~~~~---~-~~~------ 104 (230)
+..+++++|+|||+++.. ++.++.+|+++|+++ + +++||+ | .||.... + .-+
T Consensus 106 ~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~ 184 (491)
T PLN02996 106 REEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVK-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLN 184 (491)
T ss_pred HHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeeeEEecCCCceeeeecCCCccccc
Confidence 788899999999999864 356899999999996 6 899885 3 2554210 0 000
Q ss_pred ---------------------------------------CC------chhHHHHHHHHHHHHHHH--cCCCEEEEecccc
Q 026978 105 ---------------------------------------LP------PFEAYLEKKRIVRRAIEA--AQIPYTFVSANLC 137 (230)
Q Consensus 105 ---------------------------------------~~------p~~~~~~~K~~~e~~l~~--~gl~~tilr~g~~ 137 (230)
.+ +.+.|..+|..+|.++++ .+++.+++||+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V 264 (491)
T PLN02996 185 GNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMI 264 (491)
T ss_pred ccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCCCEEEECCCEe
Confidence 00 113477999999999976 5899999999777
Q ss_pred chhhc-c--cc-----------cCCCCCCCcEEEecCCCcccCCCCCCh-hhhhhhh
Q 026978 138 GAYFV-N--VL-----------LRPFESHDDVVVYGSGEAKALPPPEDI-PISIMHS 179 (230)
Q Consensus 138 ~~~~~-~--~~-----------~~~~~~~~~~~i~g~G~~~~~~~~~~~-~~~~~~~ 179 (230)
++..- | .. +.... |....++|||++.+.-+|.+. +.++...
T Consensus 265 ~G~~~~p~~gwi~~~~~~~~i~~~~~~-g~~~~~~gdg~~~~D~v~Vddvv~a~l~a 320 (491)
T PLN02996 265 TSTYKEPFPGWIEGLRTIDSVIVGYGK-GKLTCFLADPNSVLDVIPADMVVNAMIVA 320 (491)
T ss_pred ccCCcCCCCCcccchhhHHHHHHHhcc-ceEeEEecCCCeecceecccHHHHHHHHH
Confidence 65321 1 00 11122 244568899998887666654 4443333
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.3e-11 Score=97.34 Aligned_cols=135 Identities=18% Similarity=0.247 Sum_probs=79.2
Q ss_pred CHHHHhhCCC--eEEEEEcCCCCCCCcchHhhh-hhh------------cCCCeEEEEecCCC------HHHHHHHhcCC
Q 026978 1 MVKASVSSGH--KTFVYARPVTQNSRPSKLEIH-KEF------------QGIGVTIIEGELDE------HKKIVSILKEV 59 (230)
Q Consensus 1 lv~~Ll~~g~--~V~~l~R~~~~~~~p~k~~~l-~~l------------~~~gv~vv~gD~~d------~~~L~~al~g~ 59 (230)
|+++|++++. +|.+|+|..+... -.+.+ +.+ ....++++.||+++ .+.+....+.+
T Consensus 12 ll~~Ll~~~~~~~I~cLvR~~~~~~---~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v 88 (249)
T PF07993_consen 12 LLEELLRQPPDVKIYCLVRASSSQS---ALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDYQELAEEV 88 (249)
T ss_dssp HHHHHHHHS-TTEEEEEE-SSSHHH---HHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHHHHHHHH-
T ss_pred HHHHHHcCCCCcEEEEEEeCccccc---chhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHhhcccccc
Confidence 4678999886 8999999864311 11111 111 15689999999986 35677777899
Q ss_pred CEEEEcCCCC------------ChhhHHHHHHHHHHhCCcceEec-cc-ccc--cCCC----------C---CCCCchhH
Q 026978 60 DVVISTVAYP------------QFLDQLEIVHAIKVAGNIKRFLP-SE-FGC--EEDK----------V---RPLPPFEA 110 (230)
Q Consensus 60 D~Vi~~~~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~--~~~~----------~---~~~~p~~~ 110 (230)
|+||||++.. |+.++++|++.|.+.+ .++|++ |+ +-. .... . ........
T Consensus 89 ~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 167 (249)
T PF07993_consen 89 DVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNG 167 (249)
T ss_dssp -EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-
T ss_pred ceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccchhhccCCcc
Confidence 9999999875 3689999999999777 678774 32 211 1100 0 01112247
Q ss_pred HHHHHHHHHHHHHH----cCCCEEEEeccccch
Q 026978 111 YLEKKRIVRRAIEA----AQIPYTFVSANLCGA 139 (230)
Q Consensus 111 ~~~~K~~~e~~l~~----~gl~~tilr~g~~~~ 139 (230)
|..+|..+|+++++ .|++++++|||...+
T Consensus 168 Y~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 168 YEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 88999999999976 399999999998876
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=94.36 Aligned_cols=178 Identities=20% Similarity=0.255 Sum_probs=116.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
||+.|+.+||+|++++.-..+.+ +++. .+....++++.-|+.. +.+.++|.|||+|+..
T Consensus 43 LvdkLm~egh~VIa~Dn~ftg~k-----~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhLAapasp~~y~~npv 112 (350)
T KOG1429|consen 43 LVDKLMTEGHEVIALDNYFTGRK-----ENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHLAAPASPPHYKYNPV 112 (350)
T ss_pred HHHHHHhcCCeEEEEecccccch-----hhcchhccCcceeEEEeechh-----HHHHHhhhhhhhccCCCCcccccCcc
Confidence 58899999999999997665432 1111 2234567777777754 4788999999999864
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-c---cccccCCCC---------CCCCchhHHHHHHHHHHHHHHH----cCC
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEEDKV---------RPLPPFEAYLEKKRIVRRAIEA----AQI 127 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~~~~---------~~~~p~~~~~~~K~~~e~~l~~----~gl 127 (230)
+.-++.+.+-.|++.| +||+. | .||-+...+ .+..|..-|...|+.+|.++.+ .|+
T Consensus 113 ktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~gi 190 (350)
T KOG1429|consen 113 KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGI 190 (350)
T ss_pred ceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCc
Confidence 3468899999999998 78774 3 388643221 2223444577899999988765 689
Q ss_pred CEEEEec----cccchhhcccc----c--CCCCCCCcEEEecCCCccc-CCCCCChhhhhhhheeecCCc-ccccCCCC
Q 026978 128 PYTFVSA----NLCGAYFVNVL----L--RPFESHDDVVVYGSGEAKA-LPPPEDIPISIMHSLLAKGDS-MNFELGED 194 (230)
Q Consensus 128 ~~tilr~----g~~~~~~~~~~----~--~~~~~~~~~~i~g~G~~~~-~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 194 (230)
..+|.|+ |++|.+-.++. + .+.+ +++++||+|.+.+ -.+..|.+...+.-+ .++. .++++|.+
T Consensus 191 E~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~--epltv~g~G~qtRSF~yvsD~Vegll~Lm--~s~~~~pvNiGnp 265 (350)
T KOG1429|consen 191 EVRIARIFNTYGPRMHMDDGRVVSNFIAQALRG--EPLTVYGDGKQTRSFQYVSDLVEGLLRLM--ESDYRGPVNIGNP 265 (350)
T ss_pred EEEEEeeecccCCccccCCChhhHHHHHHHhcC--CCeEEEcCCcceEEEEeHHHHHHHHHHHh--cCCCcCCcccCCc
Confidence 9999985 44444432221 1 3445 8999999999876 234444443333222 2232 25677765
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-09 Score=94.33 Aligned_cols=139 Identities=13% Similarity=0.202 Sum_probs=93.9
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHh-hhhhh-------cCCCeEEEEecCCC------HHHHHHHhcCCCEEEE
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLE-IHKEF-------QGIGVTIIEGELDE------HKKIVSILKEVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~-~l~~l-------~~~gv~vv~gD~~d------~~~L~~al~g~D~Vi~ 64 (230)
|+++|+++| ++|++++|+.+....-++.+ .+... ...+++++.+|+++ .+.+..+.+++|+|||
T Consensus 15 l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih 94 (367)
T TIGR01746 15 LLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVH 94 (367)
T ss_pred HHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEe
Confidence 578899999 56999999864210000110 01000 00479999999875 4567788889999999
Q ss_pred cCCCC------------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCC-----CCchhHHHHHHHHHH
Q 026978 65 TVAYP------------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRP-----LPPFEAYLEKKRIVR 119 (230)
Q Consensus 65 ~~~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~-----~~p~~~~~~~K~~~e 119 (230)
+++.. ++.++.+++++|.+.+ +++|+. |+ ++... .+..+ ..+...|..+|..+|
T Consensus 95 ~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 173 (367)
T TIGR01746 95 NGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAE 173 (367)
T ss_pred CCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHH
Confidence 99853 3568899999999999 898875 33 33211 01110 011235779999999
Q ss_pred HHHHH---cCCCEEEEeccccchh
Q 026978 120 RAIEA---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 120 ~~l~~---~gl~~tilr~g~~~~~ 140 (230)
+++++ .|++++++|||.+++.
T Consensus 174 ~~~~~~~~~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 174 LLVREASDRGLPVTIVRPGRILGN 197 (367)
T ss_pred HHHHHHHhcCCCEEEECCCceeec
Confidence 98875 4899999999988863
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=90.06 Aligned_cols=127 Identities=20% Similarity=0.319 Sum_probs=89.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
|+++|+++|+.|++++|+.. +.+.+......+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 la~~L~~~g~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 91 (276)
T PRK06482 18 MTERLLARGDRVAATVRRPD------ALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGA 91 (276)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcc
Confidence 47889999999999999742 2222222213468899999999998887764 479999999853
Q ss_pred ---------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++ ++.+ .++||. |+.+.... ..+...|..+|..++.+++.
T Consensus 92 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l~~~~ 166 (276)
T PRK06482 92 AEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIA----YPGFSLYHATKWGIEGFVEAVAQEV 166 (276)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccC----CCCCchhHHHHHHHHHHHHHHHHHh
Confidence 234567778886 6667 788875 55443211 11234677899988876643
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.|+++++++||.+.
T Consensus 167 ~~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 167 APFGIEFTIVEPGPAR 182 (276)
T ss_pred hccCcEEEEEeCCccc
Confidence 58999999999874
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.6e-09 Score=89.65 Aligned_cols=156 Identities=17% Similarity=0.090 Sum_probs=92.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|++.|+++|++|++++|+..... .+...++ .|+.+ ..+.++++++|+|||+++..
T Consensus 14 l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~ 79 (292)
T TIGR01777 14 LTQRLTKDGHEVTILTRSPPAGA---------NTKWEGY----KPWAP-LAESEALEGADAVINLAGEPIADKRWTEERK 79 (292)
T ss_pred HHHHHHHcCCEEEEEeCCCCCCC---------cccceee----ecccc-cchhhhcCCCCEEEECCCCCcccccCCHHHH
Confidence 47889999999999999865321 1111111 12322 45677889999999999852
Q ss_pred ------ChhhHHHHHHHHHHhCCcc--eEec-cc---ccccC----CCCCCCCchhHHHHHHHHHHHHH---HHcCCCEE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIK--RFLP-SE---FGCEE----DKVRPLPPFEAYLEKKRIVRRAI---EAAQIPYT 130 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vk--r~v~-S~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l---~~~gl~~t 130 (230)
++.+..+++++|+++| ++ +||. |. ||... ++..+..+...+...+...|+.+ ++.+++++
T Consensus 80 ~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (292)
T TIGR01777 80 QEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVV 158 (292)
T ss_pred HHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcCCceE
Confidence 2456899999999999 74 4554 32 55321 12221212112223444455443 34689999
Q ss_pred EEeccccchhhc---ccc---cCCCCCCCcEEEecCCCcccCCCCCChhhh
Q 026978 131 FVSANLCGAYFV---NVL---LRPFESHDDVVVYGSGEAKALPPPEDIPIS 175 (230)
Q Consensus 131 ilr~g~~~~~~~---~~~---~~~~~~~~~~~i~g~G~~~~~~~~~~~~~~ 175 (230)
++||+.+++... +.+ +.... . ..+|+|++.+..++.+.+..
T Consensus 159 ilR~~~v~G~~~~~~~~~~~~~~~~~--~--~~~g~~~~~~~~i~v~Dva~ 205 (292)
T TIGR01777 159 LLRTGIVLGPKGGALAKMLPPFRLGL--G--GPLGSGRQWFSWIHIEDLVQ 205 (292)
T ss_pred EEeeeeEECCCcchhHHHHHHHhcCc--c--cccCCCCcccccEeHHHHHH
Confidence 999999887421 111 11111 1 12688888777666644433
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=89.24 Aligned_cols=180 Identities=18% Similarity=0.173 Sum_probs=125.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
+|..|.+.|-+|++=-|..... +- .++-+.. -.+=+..-|+.|++++.++++...+||++.|..
T Consensus 77 vvnklak~GSQviiPyR~d~~~--~r---~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~D 151 (391)
T KOG2865|consen 77 VVNKLAKMGSQVIIPYRGDEYD--PR---HLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFED 151 (391)
T ss_pred HHHHHhhcCCeEEEeccCCccc--hh---heeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccccccCCccccc
Confidence 4778899999999887865332 21 2222212 235678889999999999999999999999964
Q ss_pred -ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccc--
Q 026978 70 -QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVL-- 145 (230)
Q Consensus 70 -~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~-- 145 (230)
++....+|..-|+++| |.|||. |++|.... ..+.+.++|...|..+++.==+.|||||+..++.....+
T Consensus 152 vn~~~aerlAricke~G-VerfIhvS~Lganv~------s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ 224 (391)
T KOG2865|consen 152 VNVHIAERLARICKEAG-VERFIHVSCLGANVK------SPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNY 224 (391)
T ss_pred ccchHHHHHHHHHHhhC-hhheeehhhcccccc------ChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHH
Confidence 3567899999999999 999996 88885422 125788999999999998766799999998876422111
Q ss_pred ---cCCCCCCCcEEEecCCCccc-CCC-CCChhhhhhhheeec-CCcccccCCCC
Q 026978 146 ---LRPFESHDDVVVYGSGEAKA-LPP-PEDIPISIMHSLLAK-GDSMNFELGED 194 (230)
Q Consensus 146 ---~~~~~~~~~~~i~g~G~~~~-~~~-~~~~~~~~~~~~~~~-g~~~~~~~~~~ 194 (230)
+...- +.+++++.|+... +|+ ..|+.+++...+.-. ....+++..|+
T Consensus 225 ya~~~rk~--~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP 277 (391)
T KOG2865|consen 225 YASFWRKF--GFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGP 277 (391)
T ss_pred HHHHHHhc--CceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCC
Confidence 11112 6688898886543 454 346666655544321 12346788877
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.5e-09 Score=87.39 Aligned_cols=129 Identities=14% Similarity=0.122 Sum_probs=87.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh---cCCCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIEGELDEHKKIVSILK-EVDVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l---~~~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~~------ 70 (230)
++++|+++|++|++++|+... .+.+... ...+++++.+|++|.+++.+++. ++|+|||+++...
T Consensus 18 ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 91 (257)
T PRK09291 18 VALRLARKGHNVIAGVQIAPQ------VTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVD 91 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCccc
Confidence 468899999999999997432 1111111 12358899999999999999988 8999999998531
Q ss_pred -------------h----hhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH-------Hc
Q 026978 71 -------------F----LDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE-------AA 125 (230)
Q Consensus 71 -------------~----~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-------~~ 125 (230)
+ ...+.++.++++.+ .+++|. |+.+..... + ....|..+|..++.+.+ ..
T Consensus 92 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~--~--~~~~Y~~sK~a~~~~~~~l~~~~~~~ 166 (257)
T PRK09291 92 IPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG--P--FTGAYCASKHALEAIAEAMHAELKPF 166 (257)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC--C--CcchhHHHHHHHHHHHHHHHHHHHhc
Confidence 1 12344566677788 788874 443221111 1 12357788988876543 36
Q ss_pred CCCEEEEeccccchh
Q 026978 126 QIPYTFVSANLCGAY 140 (230)
Q Consensus 126 gl~~tilr~g~~~~~ 140 (230)
|++++.|+||++...
T Consensus 167 gi~~~~v~pg~~~t~ 181 (257)
T PRK09291 167 GIQVATVNPGPYLTG 181 (257)
T ss_pred CcEEEEEecCccccc
Confidence 999999999998654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.3e-09 Score=87.65 Aligned_cols=123 Identities=18% Similarity=0.286 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|++++|+..... ...+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 20 ~a~~l~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~ 88 (270)
T PRK06179 20 TAEKLARAGYRVFGTSRNPARAA-----------PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGA 88 (270)
T ss_pred HHHHHHHCCCEEEEEeCChhhcc-----------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcC
Confidence 47889999999999999754321 135789999999999999998874 699999998631
Q ss_pred ----------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..+++++ +++.+ .+++|. |+ .|.... + ....|..+|..++.+++.
T Consensus 89 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~--~~~~Y~~sK~a~~~~~~~l~~e 162 (270)
T PRK06179 89 AEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPA---P--YMALYAASKHAVEGYSESLDHE 162 (270)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCC---C--CccHHHHHHHHHHHHHHHHHHH
Confidence 1234444444 67778 788874 33 332111 1 123577899888766543
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|++++.++||++...
T Consensus 163 l~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 163 VRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred HhhhCcEEEEEeCCCcccc
Confidence 6999999999987654
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.4e-09 Score=86.16 Aligned_cols=128 Identities=13% Similarity=0.196 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|++++|+.. +.+.+......++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 20 la~~l~~~G~~V~~~~r~~~------~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~ 93 (277)
T PRK06180 20 LAQAALAAGHRVVGTVRSEA------ARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA 93 (277)
T ss_pred HHHHHHhCcCEEEEEeCCHH------HHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcc
Confidence 47889999999999999743 2222222222358889999999999888777 4799999998631
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++ ++.+ .+++|. |+.+.... ..+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 94 IEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLIT----MPGIGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCC----CCCcchhHHHHHHHHHHHHHHHHHh
Confidence 23456666664 4455 677774 43322111 11234677899887766543
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+++++++||++..
T Consensus 169 ~~~gi~v~~i~Pg~v~t 185 (277)
T PRK06180 169 APFGIHVTAVEPGSFRT 185 (277)
T ss_pred hhhCcEEEEEecCCccc
Confidence 589999999998754
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-09 Score=97.77 Aligned_cols=111 Identities=17% Similarity=0.158 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-------Chhh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP-------QFLD 73 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-------~~~~ 73 (230)
|+++|+++||+|++++|..... ...+++++.+|++|.. +.++++++|+|||+++.. ++.+
T Consensus 16 La~~Ll~~G~~Vi~ldr~~~~~------------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~~vNv~G 82 (699)
T PRK12320 16 VTRQLIAAGHTVSGIAQHPHDA------------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPGGVGITG 82 (699)
T ss_pred HHHHHHhCCCEEEEEeCChhhc------------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchhhHHHHH
Confidence 5788999999999999864311 1357899999999985 888999999999999854 3567
Q ss_pred HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchh
Q 026978 74 QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAY 140 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~ 140 (230)
+.|++++|+++| + |+|. |+ +|.. . .+ ...|.++.+++++++++|++..++.
T Consensus 83 t~nLleAA~~~G-v-RiV~~SS~~G~~---------~-~~----~~aE~ll~~~~~p~~ILR~~nVYGp 135 (699)
T PRK12320 83 LAHVANAAARAG-A-RLLFVSQAAGRP---------E-LY----RQAETLVSTGWAPSLVIRIAPPVGR 135 (699)
T ss_pred HHHHHHHHHHcC-C-eEEEEECCCCCC---------c-cc----cHHHHHHHhcCCCEEEEeCceecCC
Confidence 899999999999 7 4664 43 3321 0 01 1467778778899999999777664
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.4e-09 Score=85.86 Aligned_cols=126 Identities=15% Similarity=0.220 Sum_probs=88.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +.+ .+...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 19 la~~l~~~G~~V~~~~r~~~------~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 89 (273)
T PRK06182 19 TARRLAAQGYTVYGAARRVD------KME---DLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGA 89 (273)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHH---HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCc
Confidence 47889999999999999742 222 2334578999999999999988876 7899999998531
Q ss_pred ----------------hh----hHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 71 ----------------FL----DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 71 ----------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
+. ....++..+++.+ .+++|. |+.+..... + ....|..+|..++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~--~--~~~~Y~~sKaa~~~~~~~l~~e~ 164 (273)
T PRK06182 90 IEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT--P--LGAWYHATKFALEGFSDALRLEV 164 (273)
T ss_pred hhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC--C--CccHhHHHHHHHHHHHHHHHHHh
Confidence 11 2456667777877 778774 443321111 1 11246788988876543
Q ss_pred -HcCCCEEEEeccccchh
Q 026978 124 -AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~~ 140 (230)
..|+++++++||++...
T Consensus 165 ~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 165 APFGIDVVVIEPGGIKTE 182 (273)
T ss_pred cccCCEEEEEecCCcccc
Confidence 36899999999988643
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-09 Score=90.33 Aligned_cols=127 Identities=18% Similarity=0.327 Sum_probs=82.1
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhh----cCCCeE----EEEecCCCHHHHHHHhc--CCCEEEEcCCCC
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEF----QGIGVT----IIEGELDEHKKIVSILK--EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l----~~~gv~----vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~ 69 (230)
||+.|++.+ ..+++++|+.+..- +.-.++ ...+++ .+.||+.|.+.|..+++ +.|+|||+|+.-
T Consensus 14 L~rql~~~~p~~lil~d~~E~~l~-----~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdiVfHaAA~K 88 (293)
T PF02719_consen 14 LVRQLLRYGPKKLILFDRDENKLY-----ELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDIVFHAAALK 88 (293)
T ss_dssp HHHHHHCCB-SEEEEEES-HHHHH-----HHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SEEEE-----
T ss_pred HHHHHHhcCCCeEEEeCCChhHHH-----HHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCEEEEChhcC
Confidence 578899888 68999999854321 111122 223454 35899999999999999 999999999975
Q ss_pred C---------------hhhHHHHHHHHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHc-------CC
Q 026978 70 Q---------------FLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAA-------QI 127 (230)
Q Consensus 70 ~---------------~~~~~~ll~Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~-------gl 127 (230)
+ +.++.|++++|.++| |+|||..+ +|.. .+|.+-+..+|+.+|+++... +.
T Consensus 89 hVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IS--TDKA----v~PtnvmGatKrlaE~l~~~~~~~~~~~~t 161 (293)
T PF02719_consen 89 HVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIS--TDKA----VNPTNVMGATKRLAEKLVQAANQYSGNSDT 161 (293)
T ss_dssp -HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEE--ECGC----SS--SHHHHHHHHHHHHHHHHCCTSSSS--
T ss_pred CCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcc--cccc----CCCCcHHHHHHHHHHHHHHHHhhhCCCCCc
Confidence 3 468999999999999 99998521 1211 135556789999999999861 35
Q ss_pred CEEEEeccccch
Q 026978 128 PYTFVSANLCGA 139 (230)
Q Consensus 128 ~~tilr~g~~~~ 139 (230)
.++.+|.|-..+
T Consensus 162 ~f~~VRFGNVlg 173 (293)
T PF02719_consen 162 KFSSVRFGNVLG 173 (293)
T ss_dssp EEEEEEE-EETT
T ss_pred EEEEEEecceec
Confidence 788899776654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.5e-09 Score=80.44 Aligned_cols=122 Identities=16% Similarity=0.207 Sum_probs=94.1
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
+++++++++ -.|+++.|..... |. ....+..+..|++..+++...++|.|+.|||++.+.
T Consensus 34 llk~~~E~~~FSKV~~i~RR~~~d--~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgf 103 (238)
T KOG4039|consen 34 LLKHAQEAPQFSKVYAILRRELPD--PA--------TDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKAGADGF 103 (238)
T ss_pred HHHHHHhcccceeEEEEEeccCCC--cc--------ccceeeeEEechHHHHHHHhhhcCCceEEEeecccccccccCce
Confidence 356777777 4799999875321 21 235677888999999999999999999999998752
Q ss_pred ----hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-EEEEeccccch
Q 026978 71 ----FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP-YTFVSANLCGA 139 (230)
Q Consensus 71 ----~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~-~tilr~g~~~~ 139 (230)
-+....+.++|++.| +|+|+. |+-|.+.+. ..-|...|.++|+-+.+..++ ++|+|||+...
T Consensus 104 ykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS------rFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~ 171 (238)
T KOG4039|consen 104 YKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS------RFLYMKMKGEVERDVIELDFKHIIILRPGPLLG 171 (238)
T ss_pred EeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc------ceeeeeccchhhhhhhhccccEEEEecCcceec
Confidence 345678899999999 999984 888876432 124568899999999887775 78889998764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-08 Score=82.67 Aligned_cols=135 Identities=10% Similarity=0.133 Sum_probs=87.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|++.|+++||+|++++|...... ..-.+.+.. ...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 l~~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~ 99 (249)
T PRK12825 22 IALRLARAGADVVVHYRSDEEAA-EELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKP 99 (249)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHH-HHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCC
Confidence 47889999999988888754211 000011111 13458899999999999888775 5699999998431
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
+.+..++++++ ++.+ +++||. |+.+..... .+...|..+|...+.+++
T Consensus 100 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~----~~~~~y~~sK~~~~~~~~~~~~~~ 174 (249)
T PRK12825 100 LADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW----PGRSNYAAAKAGLVGLTKALAREL 174 (249)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC----CCchHHHHHHHHHHHHHHHHHHHH
Confidence 22345555555 6677 889885 433222111 122356788877665543
Q ss_pred -HcCCCEEEEeccccchhhc
Q 026978 124 -AAQIPYTFVSANLCGAYFV 142 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~~~~ 142 (230)
..++.+++++||.+.+...
T Consensus 175 ~~~~i~~~~i~pg~~~~~~~ 194 (249)
T PRK12825 175 AEYGITVNMVAPGDIDTDMK 194 (249)
T ss_pred hhcCeEEEEEEECCccCCcc
Confidence 3689999999999987543
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-08 Score=84.23 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=77.0
Q ss_pred ecCCCHHHHHHHhcCC--CEEEEcCCCCC---------------hhhHHHHHHHHHHhCCcceEecc-cc---cc---cC
Q 026978 44 GELDEHKKIVSILKEV--DVVISTVAYPQ---------------FLDQLEIVHAIKVAGNIKRFLPS-EF---GC---EE 99 (230)
Q Consensus 44 gD~~d~~~L~~al~g~--D~Vi~~~~~~~---------------~~~~~~ll~Aa~~ag~Vkr~v~S-~~---g~---~~ 99 (230)
.|++|++.+.+.++.. |+|||+++.++ ..+..|+.++|++.| .+-+-.| .| |. +.
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCC
Confidence 5899999999999965 99999999873 347899999999999 5543234 33 22 23
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhh
Q 026978 100 DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 100 ~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~ 141 (230)
.+.++..|..-|..+|...|..+++.+-.++++|.+|+++..
T Consensus 113 ~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~ 154 (281)
T COG1091 113 KETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154 (281)
T ss_pred CCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCC
Confidence 344556687777899999999999999899999999998754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-08 Score=85.40 Aligned_cols=124 Identities=17% Similarity=0.269 Sum_probs=88.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. +.+ .+...+++++.+|++|.+++.++++ .+|+|||+++...
T Consensus 20 la~~l~~~G~~Vi~~~r~~~------~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 90 (277)
T PRK05993 20 CARALQSDGWRVFATCRKEE------DVA---ALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPG 90 (277)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHH---HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCC
Confidence 46789999999999999743 222 3334578999999999988877665 4699999987531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---- 123 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---- 123 (230)
+.+ ..++++++++.+ ..++|. |..|... ..+...|..+|..++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~~ 164 (277)
T PRK05993 91 AVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVP-----MKYRGAYNASKFAIEGLSLTLRM 164 (277)
T ss_pred CcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCC-----CCccchHHHHHHHHHHHHHHHHH
Confidence 112 567788888888 788874 3334221 1123467789999887654
Q ss_pred ---HcCCCEEEEeccccch
Q 026978 124 ---AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~ 139 (230)
..|+.++.|+||++..
T Consensus 165 el~~~gi~v~~v~Pg~v~T 183 (277)
T PRK05993 165 ELQGSGIHVSLIEPGPIET 183 (277)
T ss_pred HhhhhCCEEEEEecCCccC
Confidence 3689999999998754
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.8e-08 Score=79.98 Aligned_cols=130 Identities=15% Similarity=0.089 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|++++|+.... .+.+..+...+++++.+|+.|.+++.++++ ++|+|||+++...
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 97 (239)
T PRK12828 23 TAAWLAARGARVALIGRGAAPL-----SQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGT 97 (239)
T ss_pred HHHHHHHCCCeEEEEeCChHhH-----HHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCC
Confidence 4788999999999999975421 112223444678899999999998887776 6899999987531
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
..+..++++++ ++.+ ++++|. |+.+..... .+...|..+|...+.+++.
T Consensus 98 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~~~y~~sk~a~~~~~~~~a~~~ 172 (239)
T PRK12828 98 IADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG----PGMGAYAAAKAGVARLTEALAAEL 172 (239)
T ss_pred hhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC----CCcchhHHHHHHHHHHHHHHHHHh
Confidence 22345666655 4567 888874 443321111 1223566788776655542
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.++.+..++||++...
T Consensus 173 ~~~~i~~~~i~pg~v~~~ 190 (239)
T PRK12828 173 LDRGITVNAVLPSIIDTP 190 (239)
T ss_pred hhcCeEEEEEecCcccCc
Confidence 5899999999988754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=3e-08 Score=81.24 Aligned_cols=131 Identities=11% Similarity=0.074 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|++.|+++|+.|++++|+..... + ....+.. ..++++.+|+.|.+++.++++ .+|+|||+++...
T Consensus 22 l~~~l~~~g~~V~~~~r~~~~~~---~--~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 96 (251)
T PRK12826 22 IAVRLAADGAEVIVVDICGDDAA---A--TAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPL 96 (251)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH---H--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 47889999999999999853211 0 1112222 348899999999999988886 6899999997632
Q ss_pred ------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++ ++.+ .++||. |+.+.... +..+...|..+|..++.+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~---~~~~~~~y~~sK~a~~~~~~~~~~ 172 (251)
T PRK12826 97 TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRV---GYPGLAHYAASKAGLVGFTRALAL 172 (251)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhcc---CCCCccHHHHHHHHHHHHHHHHHH
Confidence 22345566665 4566 678774 33322100 111223567888777766543
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.++++++++||.+.+.
T Consensus 173 ~~~~~~i~~~~i~pg~~~~~ 192 (251)
T PRK12826 173 ELAARNITVNSVHPGGVDTP 192 (251)
T ss_pred HHHHcCeEEEEEeeCCCCcc
Confidence 5899999999998764
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3e-08 Score=88.83 Aligned_cols=126 Identities=16% Similarity=0.288 Sum_probs=95.0
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC----
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~---- 69 (230)
||+++++.+ -++++++|+..+.. +.-++|. ......+-||+.|.+.+..++++ +|+|||+|+.-
T Consensus 266 l~~qil~~~p~~i~l~~~~E~~~~-----~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl 340 (588)
T COG1086 266 LCRQILKFNPKEIILFSRDEYKLY-----LIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPL 340 (588)
T ss_pred HHHHHHhcCCCEEEEecCchHHHH-----HHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcc
Confidence 467778877 57888999865421 1111222 25678899999999999999999 99999999864
Q ss_pred -----------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHc-------CCCEE
Q 026978 70 -----------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAA-------QIPYT 130 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~-------gl~~t 130 (230)
|+-++.|+++||.++| |++||. |. |. +.+|.+-+..+|+.+|.++.+. +-.++
T Consensus 341 ~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST---DK----AV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~ 412 (588)
T COG1086 341 VEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST---DK----AVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFC 412 (588)
T ss_pred hhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec---Cc----ccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEE
Confidence 3679999999999999 999985 32 21 2236567789999999998752 36688
Q ss_pred EEeccccch
Q 026978 131 FVSANLCGA 139 (230)
Q Consensus 131 ilr~g~~~~ 139 (230)
.+|.|-.++
T Consensus 413 ~VRFGNVlG 421 (588)
T COG1086 413 VVRFGNVLG 421 (588)
T ss_pred EEEecceec
Confidence 889877765
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-08 Score=80.50 Aligned_cols=128 Identities=17% Similarity=0.227 Sum_probs=83.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... .+.+.......+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 19 ~a~~l~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 92 (275)
T PRK08263 19 WTEAALERGDRVVATARDTAT------LADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM 92 (275)
T ss_pred HHHHHHHCCCEEEEEECCHHH------HHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccc
Confidence 467899999999999997432 222212113457889999999998877665 5699999998641
Q ss_pred ----------------hhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 71 ----------------FLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 71 ----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
+.+..+++++ +++.+ .+++|. |+.+..... .....|..+|...+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~ 167 (275)
T PRK08263 93 IEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAF----PMSGIYHASKWALEGMSEALAQEV 167 (275)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCC----CCccHHHHHHHHHHHHHHHHHHHh
Confidence 2233334444 46677 778774 332221111 112357788988766553
Q ss_pred -HcCCCEEEEeccccch
Q 026978 124 -AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~ 139 (230)
..|+++++++||++..
T Consensus 168 ~~~gi~v~~v~Pg~~~t 184 (275)
T PRK08263 168 AEFGIKVTLVEPGGYST 184 (275)
T ss_pred hhhCcEEEEEecCCccC
Confidence 2689999999998754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.3e-08 Score=80.60 Aligned_cols=130 Identities=13% Similarity=0.212 Sum_probs=84.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~- 70 (230)
|++.|+++|++|++++|+..... + ....++ ...+.++.+|+.|.+++.+++++ +|+|||+++...
T Consensus 21 l~~~l~~~g~~v~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 95 (246)
T PRK05653 21 IALRLAADGAKVVIYDSNEEAAE---A--LAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD 95 (246)
T ss_pred HHHHHHHCCCEEEEEeCChhHHH---H--HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC
Confidence 47889999999999999854211 1 111222 23477888999999988887764 599999997631
Q ss_pred ------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH----
Q 026978 71 ------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---- 123 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---- 123 (230)
+.+..++++++ ++.+ +++||. |+.+..... .+...|..+|...+...+
T Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~----~~~~~y~~sk~~~~~~~~~l~~ 170 (246)
T PRK05653 96 ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGN----PGQTNYSAAKAGVIGFTKALAL 170 (246)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCC----CCCcHhHhHHHHHHHHHHHHHH
Confidence 23455666666 4567 788874 433221111 122356677876655443
Q ss_pred ---HcCCCEEEEeccccchh
Q 026978 124 ---AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~~ 140 (230)
..++.+++++||.+...
T Consensus 171 ~~~~~~i~~~~i~pg~~~~~ 190 (246)
T PRK05653 171 ELASRGITVNAVAPGFIDTD 190 (246)
T ss_pred HHhhcCeEEEEEEeCCcCCc
Confidence 25899999999988654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.2e-08 Score=81.75 Aligned_cols=130 Identities=9% Similarity=0.071 Sum_probs=86.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC--CeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI--GVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~--gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~- 70 (230)
++++|+++|++|+++.|+..... +..+.+... .+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 97 (262)
T PRK13394 23 IALELARAGAAVAIADLNQDGAN-----AVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIV 97 (262)
T ss_pred HHHHHHHCCCeEEEEeCChHHHH-----HHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC
Confidence 47889999999999999864211 111222222 367799999999998877663 899999998631
Q ss_pred ------------------hhh----HHHHHHHH-HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAI-KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa-~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ ..++++++ ++.+ ++++|. |+.+..... .+...|..+|...+.+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~~la 172 (262)
T PRK13394 98 NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS----PLKSAYVTAKHGLLGLARVLA 172 (262)
T ss_pred CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC----CCCcccHHHHHHHHHHHHHHH
Confidence 122 56678888 6677 889885 443221111 1223566788877766542
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.++..++++||++...
T Consensus 173 ~~~~~~~i~v~~v~pg~v~~~ 193 (262)
T PRK13394 173 KEGAKHNVRSHVVCPGFVRTP 193 (262)
T ss_pred HHhhhcCeEEEEEeeCcccch
Confidence 5799999999987654
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.3e-08 Score=79.78 Aligned_cols=130 Identities=12% Similarity=0.136 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|++|++++|+..... + ....++ ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 20 la~~l~~~g~~v~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~ 94 (258)
T PRK12429 20 IALALAKEGAKVVIADLNDEAAA---A--AAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHV 94 (258)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHH---H--HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 57889999999999999754221 1 111221 2457889999999999888776 6899999998531
Q ss_pred ------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ ...++.++++.+ +++||. |+ .+.... .+...|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----~~~~~y~~~k~a~~~~~~~l~ 168 (258)
T PRK12429 95 APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGS-----AGKAAYVSAKHGLIGLTKVVA 168 (258)
T ss_pred CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCC-----CCcchhHHHHHHHHHHHHHHH
Confidence 122 455667777778 889885 33 222111 1223566777766654432
Q ss_pred -----cCCCEEEEeccccchhh
Q 026978 125 -----AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~~ 141 (230)
.++.++.++||++....
T Consensus 169 ~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 169 LEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred HHhcccCeEEEEEecCCCcchh
Confidence 57999999999887543
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.8e-08 Score=89.47 Aligned_cols=170 Identities=16% Similarity=0.189 Sum_probs=106.1
Q ss_pred CHHHHhhCCC---eEEEEEcCCCCCCCc-chHh-hhh------hh-----------cCCCeEEEEecCCCH------HHH
Q 026978 1 MVKASVSSGH---KTFVYARPVTQNSRP-SKLE-IHK------EF-----------QGIGVTIIEGELDEH------KKI 52 (230)
Q Consensus 1 lv~~Ll~~g~---~V~~l~R~~~~~~~p-~k~~-~l~------~l-----------~~~gv~vv~gD~~d~------~~L 52 (230)
|++.||+.+. .|++|+|..+... + ++.+ .+. .+ ....++++.||++++ +.+
T Consensus 135 LlekLLr~~~~v~kIy~LvR~k~~~~-a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~ 213 (605)
T PLN02503 135 LIEKILRTNPDVGKIYLLIKAKDKEA-AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLA 213 (605)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCchh-HHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHH
Confidence 5788998765 5799999765432 1 1110 110 00 024588999999986 456
Q ss_pred HHHhcCCCEEEEcCCCC------------ChhhHHHHHHHHHHhCCcceEec-c---cccccC---CC-CCC--------
Q 026978 53 VSILKEVDVVISTVAYP------------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE---DK-VRP-------- 104 (230)
Q Consensus 53 ~~al~g~D~Vi~~~~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~---~~-~~~-------- 104 (230)
..+.+++|+|||+++.. ++.++.+++++|++.+.+++||+ | .||... .+ .-+
T Consensus 214 ~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~ 293 (605)
T PLN02503 214 DEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARE 293 (605)
T ss_pred HHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCcccccccc
Confidence 66778899999999874 25688999999998754788885 3 244321 00 000
Q ss_pred --------------------------------------------C-----Cc-hhHHHHHHHHHHHHHHH--cCCCEEEE
Q 026978 105 --------------------------------------------L-----PP-FEAYLEKKRIVRRAIEA--AQIPYTFV 132 (230)
Q Consensus 105 --------------------------------------------~-----~p-~~~~~~~K~~~e~~l~~--~gl~~til 132 (230)
+ .+ ...|..+|..+|+.+++ .+||.+++
T Consensus 294 ~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~Iv 373 (605)
T PLN02503 294 LGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVVII 373 (605)
T ss_pred cccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0 00 02456799999999986 47999999
Q ss_pred eccccch--------hhcc------cccCCCCCCCcE-EEecCCCcccCCCCCChh
Q 026978 133 SANLCGA--------YFVN------VLLRPFESHDDV-VVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 133 r~g~~~~--------~~~~------~~~~~~~~~~~~-~i~g~G~~~~~~~~~~~~ 173 (230)
||+.... |... .++.... +.+ .++|+++....-+|.|.+
T Consensus 374 RPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~--G~lr~~~~~~~~~~DiVPVD~v 427 (605)
T PLN02503 374 RPSVIESTWKDPFPGWMEGNRMMDPIVLYYGK--GQLTGFLADPNGVLDVVPADMV 427 (605)
T ss_pred cCCEecccccCCccccccCccccchhhhheec--cceeEEEeCCCeeEeEEeecHH
Confidence 9987632 1111 0111122 333 367888888777787754
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.2e-08 Score=79.14 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=83.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|++++|+..... +-.+.+... ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 l~~~L~~~G~~Vi~~~r~~~~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 99 (239)
T PRK07666 23 VAIALAKEGVNVGLLARTEENLK--AVAEEVEAY-GVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGK 99 (239)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHh-CCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCC
Confidence 47889999999999999753210 001111111 2357889999999999988887 7899999997531
Q ss_pred ----------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 71 ----------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
+.+..++++++. +.+ .+++|. |+.+..... .+...|..+|...+.+++
T Consensus 100 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~~a~e~ 174 (239)
T PRK07666 100 FLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA----AVTSAYSASKFGVLGLTESLMQEV 174 (239)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC----CCCcchHHHHHHHHHHHHHHHHHh
Confidence 123344555554 456 677764 332211110 122346678877666553
Q ss_pred -HcCCCEEEEeccccchh
Q 026978 124 -AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~~ 140 (230)
..|++++.++||++...
T Consensus 175 ~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 175 RKHNIRVTALTPSTVATD 192 (239)
T ss_pred hccCcEEEEEecCcccCc
Confidence 25899999999987653
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.3e-08 Score=79.61 Aligned_cols=130 Identities=13% Similarity=0.170 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHH-------hcCCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSI-------LKEVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~a-------l~g~D~Vi~~~~~~~ 70 (230)
|++.|+++|++|++++|+... .+.+. .+. ...++++.+|+.|.+++..+ +.+.|+|||+++...
T Consensus 17 l~~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~ 90 (255)
T TIGR01963 17 IALALAAAGANVVVNDLGEAG------AEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQH 90 (255)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 578899999999999997532 11111 111 23578899999999966544 456799999997531
Q ss_pred -------------------hhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
..+...++++ +++.+ ++++|. |+-+..... + ....|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~--~--~~~~y~~sk~a~~~~~~~~~ 165 (255)
T TIGR01963 91 VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVAS--P--FKSAYVAAKHGLIGLTKVLA 165 (255)
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCC--C--CCchhHHHHHHHHHHHHHHH
Confidence 1233344444 46777 888875 321111110 0 123566788776665542
Q ss_pred -----cCCCEEEEeccccchhh
Q 026978 125 -----AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~~ 141 (230)
.++++++++||+++...
T Consensus 166 ~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 166 LEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred HHhhhcCeEEEEEecCccccHH
Confidence 48999999999887543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.9e-08 Score=83.70 Aligned_cols=138 Identities=15% Similarity=0.235 Sum_probs=94.7
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhh-------hhhcCCCeEEEEecCC------CHHHHHHHhcCCCEEEEcC
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIH-------KEFQGIGVTIIEGELD------EHKKIVSILKEVDVVISTV 66 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l-------~~l~~~gv~vv~gD~~------d~~~L~~al~g~D~Vi~~~ 66 (230)
|+.+||.+-. +|.+++|-.+...--+|.+.. +++-...++++.||+. +...+....+.+|.|||++
T Consensus 16 Ll~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~g 95 (382)
T COG3320 16 LLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNA 95 (382)
T ss_pred HHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecc
Confidence 4678887664 999999987632100121111 1123467999999997 5777888888999999999
Q ss_pred CCC------------ChhhHHHHHHHHHHhCCcceEec-cccc---c----c----CCCC-----CCCCchhHHHHHHHH
Q 026978 67 AYP------------QFLDQLEIVHAIKVAGNIKRFLP-SEFG---C----E----EDKV-----RPLPPFEAYLEKKRI 117 (230)
Q Consensus 67 ~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g---~----~----~~~~-----~~~~p~~~~~~~K~~ 117 (230)
+.. |+.++..+++-|.... .|.|.+ |+.+ . . .+.. ....+..+|.++|+.
T Consensus 96 A~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwv 174 (382)
T COG3320 96 ALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWV 174 (382)
T ss_pred hhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHH
Confidence 864 4789999999988766 786543 3211 1 0 0100 011223578899999
Q ss_pred HHHHHHH---cCCCEEEEeccccch
Q 026978 118 VRRAIEA---AQIPYTFVSANLCGA 139 (230)
Q Consensus 118 ~e~~l~~---~gl~~tilr~g~~~~ 139 (230)
+|..+++ .|++++|+|||+..+
T Consensus 175 aE~Lvr~A~~rGLpv~I~Rpg~I~g 199 (382)
T COG3320 175 AEKLVREAGDRGLPVTIFRPGYITG 199 (382)
T ss_pred HHHHHHHHhhcCCCeEEEecCeeec
Confidence 9999986 589999999998764
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.6e-08 Score=78.64 Aligned_cols=130 Identities=13% Similarity=0.165 Sum_probs=85.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
|++.|+++|++|++++|+..... +....+. ...+.++.+|+.|.+++..+++ ++|+|||+++...
T Consensus 21 l~~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 95 (251)
T PRK07231 21 IARRFAAEGARVVVTDRNEEAAE-----RVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRN 95 (251)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 47889999999999999853211 1111221 2347899999999999988876 4699999998621
Q ss_pred ------------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ ...+++++++.+ .++||. |+.+.... ..+...|..+|...+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~----~~~~~~y~~sk~~~~~~~~~~a~ 170 (251)
T PRK07231 96 GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRP----RPGLGWYNASKGAVITLTKALAA 170 (251)
T ss_pred CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCC----CCCchHHHHHHHHHHHHHHHHHH
Confidence 122 344455555566 788875 44332211 11234567888777765543
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||++...
T Consensus 171 ~~~~~~i~v~~i~pg~~~t~ 190 (251)
T PRK07231 171 ELGPDKIRVNAVAPVVVETG 190 (251)
T ss_pred HhhhhCeEEEEEEECccCCC
Confidence 4899999999987543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-07 Score=77.05 Aligned_cols=127 Identities=16% Similarity=0.202 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|++++|+.. +++.+......+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~ 89 (248)
T PRK10538 16 ITRRFIQQGHKVIATGRRQE------RLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLE 89 (248)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCC
Confidence 47889999999999999742 2222222113468899999999998887765 7899999997520
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+ ...++.++++.+ .+++|. |+.+... +..+...|..+|...+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~ 164 (248)
T PRK10538 90 PAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW----PYAGGNVYGATKAFVRQFSLNLRTD 164 (248)
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC----CCCCCchhHHHHHHHHHHHHHHHHH
Confidence 112 345566667777 778774 4322211 111223567888887766543
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.++..+.|+||.+.
T Consensus 165 ~~~~~i~v~~v~pg~i~ 181 (248)
T PRK10538 165 LHGTAVRVTDIEPGLVG 181 (248)
T ss_pred hcCCCcEEEEEeCCeec
Confidence 47899999999885
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-08 Score=83.71 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=73.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC---------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ--------- 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~--------- 70 (230)
+++|.++|++|.++.|+ ..|+.|.+.+.+.++. .|+||||++..+
T Consensus 17 ~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~ 72 (286)
T PF04321_consen 17 ARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPE 72 (286)
T ss_dssp HHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHH
T ss_pred HHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChh
Confidence 45566677777777553 3478899999999884 699999998753
Q ss_pred ------hhhHHHHHHHHHHhCCcceEeccc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecccc
Q 026978 71 ------FLDQLEIVHAIKVAGNIKRFLPSE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLC 137 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~ag~Vkr~v~S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~ 137 (230)
+.+..+|.++|++.| ++-+..|+ |+.. ..+.++..|...|..+|.++|+.+++..-.++|+|+++.
T Consensus 73 ~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~ 151 (286)
T PF04321_consen 73 EAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWV 151 (286)
T ss_dssp HHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SE
T ss_pred hhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEeccee
Confidence 457889999999999 65433343 4221 233444567777889999999999985559999999998
Q ss_pred chh
Q 026978 138 GAY 140 (230)
Q Consensus 138 ~~~ 140 (230)
++.
T Consensus 152 ~g~ 154 (286)
T PF04321_consen 152 YGP 154 (286)
T ss_dssp ESS
T ss_pred ccc
Confidence 876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-07 Score=75.37 Aligned_cols=129 Identities=16% Similarity=0.138 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|++|++++|+... .+. ...+.. .+++++.+|+.|.+++.++++ ++|+|||+++...
T Consensus 22 la~~l~~~g~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 95 (237)
T PRK07326 22 IAEALLAEGYKVAITARDQKE------LEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF 95 (237)
T ss_pred HHHHHHHCCCEEEEeeCCHHH------HHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 468899999999999997532 111 122321 468899999999999888776 6899999987531
Q ss_pred ------------------hhhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ------------------FLDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++.+ .+ .+++|. |+..... +..+...|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~----~~~~~~~y~~sk~a~~~~~~~~~~~ 170 (237)
T PRK07326 96 APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTN----FFAGGAAYNASKFGLVGFSEAAMLD 170 (237)
T ss_pred CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhcc----CCCCCchHHHHHHHHHHHHHHHHHH
Confidence 2234456666654 34 466764 3322111 111223566788766654443
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|++++.++||++...
T Consensus 171 ~~~~gi~v~~v~pg~~~t~ 189 (237)
T PRK07326 171 LRQYGIKVSTIMPGSVATH 189 (237)
T ss_pred hcccCcEEEEEeeccccCc
Confidence 5899999999988654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-07 Score=79.24 Aligned_cols=133 Identities=10% Similarity=0.213 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHH---H---hcCCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVS---I---LKEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~---a---l~g~D~Vi~~~~~~~--- 70 (230)
|++.|+++|++|++++|+..... +-.+.+.... ...++++.+|++|.+++.+ + +.++|+|||+++...
T Consensus 19 la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~ 96 (280)
T PRK06914 19 TTLELAKKGYLVIATMRNPEKQE--NLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGF 96 (280)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHH--HHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCeeEEEECCcccccCc
Confidence 47889999999999999753210 0000011111 2368899999999988765 1 235799999997531
Q ss_pred ----------------hhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..+++++ +++.+ .+++|. |+.+..... .+...|..+|..++.+++.
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~----~~~~~Y~~sK~~~~~~~~~l~~~~ 171 (280)
T PRK06914 97 VEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGF----PGLSPYVSSKYALEGFSESLRLEL 171 (280)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCC----CCCchhHHhHHHHHHHHHHHHHHh
Confidence 2234445555 56677 778774 332211111 1234677889888876653
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.|+++++++||++...
T Consensus 172 ~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 172 KPFGIDVALIEPGSYNTN 189 (280)
T ss_pred hhhCCEEEEEecCCcccc
Confidence 4899999999988754
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.4e-07 Score=77.49 Aligned_cols=130 Identities=12% Similarity=0.119 Sum_probs=85.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
|+++|+++|++|+++.|+..... +....+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 la~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~ 95 (252)
T PRK06138 21 TAKLFAREGARVVVADRDAEAAE-----RVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG 95 (252)
T ss_pred HHHHHHHCCCeEEEecCCHHHHH-----HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999753211 0111121 2347889999999999988775 6899999998531
Q ss_pred -----------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+. ..+++++++.+ .++++. |+.+..... .....|..+|...+.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~~ 170 (252)
T PRK06138 96 TVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG----RGRAAYVASKGAIASLTRAMALD 170 (252)
T ss_pred CcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC----CCccHHHHHHHHHHHHHHHHHHH
Confidence 1222 34555666777 788774 433221111 1123577889887776653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||.+...
T Consensus 171 ~~~~~i~v~~v~pg~~~t~ 189 (252)
T PRK06138 171 HATDGIRVNAVAPGTIDTP 189 (252)
T ss_pred HHhcCeEEEEEEECCccCc
Confidence 4899999999987543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-07 Score=78.16 Aligned_cols=129 Identities=14% Similarity=0.195 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
+++.|+++|++|+++.|+.+.. +.+. .+....++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 27 ~a~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 100 (264)
T PRK12829 27 IAEAFAEAGARVHVCDVSEAAL------AATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPT 100 (264)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH------HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4788999999999999975321 1111 1212246889999999999887765 789999999864
Q ss_pred -----------------ChhhHHHHHHHH----HHhCCc-ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAI----KVAGNI-KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa----~~ag~V-kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.++.++++++ ++.+ . ++++. |+.+.... ..+...|..+|...+.+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~----~~~~~~y~~~K~a~~~~~~~l~ 175 (264)
T PRK12829 101 GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLG----YPGRTPYAASKWAVVGLVKSLA 175 (264)
T ss_pred CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccC----CCCCchhHHHHHHHHHHHHHHH
Confidence 123455555555 4445 4 45554 33221111 01223567888887776654
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.++++++++||+++..
T Consensus 176 ~~~~~~~i~~~~l~pg~v~~~ 196 (264)
T PRK12829 176 IELGPLGIRVNAILPGIVRGP 196 (264)
T ss_pred HHHhhcCeEEEEEecCCcCCh
Confidence 4899999999988653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.1e-07 Score=76.44 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=87.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.... .+.+ ..++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 l~~~l~~~G~~V~~~~r~~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 96 (248)
T PRK07806 22 TAKILAGAGAHVVVNYRQKAPR-----ANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGM 96 (248)
T ss_pred HHHHHHHCCCEEEEEeCCchHh-----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCC
Confidence 4788999999999999975321 1111 1121 2357889999999999887775 589999999753
Q ss_pred ------------ChhhHHHHHHHHHHhC-CcceEec-ccccccC-CCCCCCCchhHHHHHHHHHHHHHHH-------cCC
Q 026978 70 ------------QFLDQLEIVHAIKVAG-NIKRFLP-SEFGCEE-DKVRPLPPFEAYLEKKRIVRRAIEA-------AQI 127 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~-~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl 127 (230)
++.+..++++++.+.- .-.++|. |+.+... ..........+|..+|..++.+++. .++
T Consensus 97 ~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i 176 (248)
T PRK07806 97 ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGI 176 (248)
T ss_pred CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCe
Confidence 3457889999998742 0236663 4432211 1101111124677999999987765 578
Q ss_pred CEEEEeccccch
Q 026978 128 PYTFVSANLCGA 139 (230)
Q Consensus 128 ~~tilr~g~~~~ 139 (230)
.++.++||....
T Consensus 177 ~v~~v~pg~~~~ 188 (248)
T PRK07806 177 GFVVVSGDMIEG 188 (248)
T ss_pred EEEEeCCccccC
Confidence 888898876544
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-07 Score=77.75 Aligned_cols=134 Identities=7% Similarity=0.109 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+..... +.-.+.+.......+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 100 (249)
T PRK09135 22 IARTLHAAGYRVAIHYHRSAAEA-DALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTP 100 (249)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999998643210 000011111112358899999999999988877 479999999842
Q ss_pred ---------------ChhhHHHHHHHHHHhC--CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH------c
Q 026978 70 ---------------QFLDQLEIVHAIKVAG--NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------A 125 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~ag--~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------~ 125 (230)
++.++.++++++...- .-.+++. ++... ..+..|...|..+|..++.+++. .
T Consensus 101 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~ 176 (249)
T PRK09135 101 LGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA----ERPLKGYPVYCAAKAALEMLTRSLALELAP 176 (249)
T ss_pred hhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh----cCCCCCchhHHHHHHHHHHHHHHHHHHHCC
Confidence 2456788889886421 0123432 22111 11223445788999999888764 2
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
++.++.++||+++.
T Consensus 177 ~i~~~~v~pg~~~~ 190 (249)
T PRK09135 177 EVRVNAVAPGAILW 190 (249)
T ss_pred CCeEEEEEeccccC
Confidence 68999999988764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-07 Score=77.96 Aligned_cols=132 Identities=16% Similarity=0.211 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|++++|+... .+. .+.+. ...+.++.+|++|.+++.++++ +.|+|||+++..
T Consensus 28 la~~l~~~G~~V~~~~r~~~~------~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~ 101 (259)
T PRK08213 28 IAEALGEAGARVVLSARKAEE------LEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATW 101 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHH------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 478899999999999997432 111 11222 2356789999999999866554 579999999852
Q ss_pred ------------------ChhhHHHHHHHHHHh-----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIKVA-----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a-----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++... + .++||. |+.+..........+...|..+|...+.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~ 180 (259)
T PRK08213 102 GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRAL 180 (259)
T ss_pred CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHH
Confidence 134567788877654 5 677774 33221111100001224677899888877654
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.++.++||+...
T Consensus 181 a~~~~~~gi~v~~v~Pg~~~t 201 (259)
T PRK08213 181 AAEWGPHGIRVNAIAPGFFPT 201 (259)
T ss_pred HHHhcccCEEEEEEecCcCCC
Confidence 478899999987753
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.1e-07 Score=74.40 Aligned_cols=133 Identities=8% Similarity=0.060 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|++.|+++|++|++++|..... +++.+.+ ..+. ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 22 IAVRLAADGADVIVLDIHPMRG--RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHHHHHCCCeEEEEcCccccc--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4788999999999988754322 1121111 1121 2357889999999999888764 6899999998531
Q ss_pred -------------------hhhHHHHHHHHH-----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAIK-----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~-----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
..+..++++++. +.+ .+++|. |+.+..... .+...|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~l 174 (249)
T PRK12827 100 DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN----RGQVNYAASKAGLIGLTKTL 174 (249)
T ss_pred CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC----CCCchhHHHHHHHHHHHHHH
Confidence 235677788877 456 677774 443221111 1223567888776655442
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||+....
T Consensus 175 ~~~~~~~~i~~~~i~pg~v~t~ 196 (249)
T PRK12827 175 ANELAPRGITVNAVAPGAINTP 196 (249)
T ss_pred HHHhhhhCcEEEEEEECCcCCC
Confidence 5899999999987653
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2e-07 Score=76.25 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|++++|+... .+.+ +.++ ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 la~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 95 (241)
T PRK07454 22 TALAFAKAGWDLALVARSQDA------LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAY 95 (241)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccC
Confidence 578999999999999997532 1111 1111 2468889999999998888776 4799999998531
Q ss_pred -------------------hhhHHH----HHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 71 -------------------FLDQLE----IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 71 -------------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
+.+..+ ++..+++.+ ..++|. |+...... ..+...|..+|...+.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~~~~~~~~~~a 170 (241)
T PRK07454 96 TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNA----FPQWGAYCVSKAALAAFTKCLA 170 (241)
T ss_pred CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcC----CCCccHHHHHHHHHHHHHHHHH
Confidence 122333 344445565 567764 33221111 1122357788888776553
Q ss_pred ----HcCCCEEEEeccccch
Q 026978 124 ----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ----~~gl~~tilr~g~~~~ 139 (230)
..|++++.|+||++..
T Consensus 171 ~e~~~~gi~v~~i~pg~i~t 190 (241)
T PRK07454 171 EEERSHGIRVCTITLGAVNT 190 (241)
T ss_pred HHhhhhCCEEEEEecCcccC
Confidence 2589999999998753
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.6e-07 Score=75.40 Aligned_cols=130 Identities=11% Similarity=0.156 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|++.|+++|++|++++|+..... . + ....++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 l~~~l~~~G~~v~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 96 (248)
T PRK05557 21 IAERLAAQGANVVINYASSEAGA-E-A--LVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD 96 (248)
T ss_pred HHHHHHHCCCEEEEEeCCchhHH-H-H--HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 47889999999999988753210 0 0 111121 2457788999999999888766 6799999998531
Q ss_pred ------------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH----
Q 026978 71 ------------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---- 123 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---- 123 (230)
+.+..++++++.. .+ .++|+. |+.+...... ....|..+|...+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~----~~~~y~~sk~a~~~~~~~~a~ 171 (248)
T PRK05557 97 NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNP----GQANYAASKAGVIGFTKSLAR 171 (248)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCC----CCchhHHHHHHHHHHHHHHHH
Confidence 2344556666654 45 667774 3322211111 12356678877765554
Q ss_pred ---HcCCCEEEEeccccch
Q 026978 124 ---AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~ 139 (230)
..++.++.++||++..
T Consensus 172 ~~~~~~i~~~~v~pg~~~~ 190 (248)
T PRK05557 172 ELASRGITVNAVAPGFIET 190 (248)
T ss_pred HhhhhCeEEEEEecCccCC
Confidence 2589999999998753
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.71 E-value=8.5e-08 Score=79.17 Aligned_cols=124 Identities=19% Similarity=0.328 Sum_probs=88.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh---hhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCCCh----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK---EFQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYPQF---- 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~---~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~~~---- 71 (230)
|++-||++||+|..+.|..+... +.+. .|. .+....+.++.||++|..+|.++++.+ |-|+|+++.+.+
T Consensus 18 La~lLLekGY~VhGi~Rrss~~n-~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSF 95 (345)
T COG1089 18 LAELLLEKGYEVHGIKRRSSSFN-TPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSF 95 (345)
T ss_pred HHHHHHhcCcEEEEEeeccccCC-cccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCchhheeccccccccccc
Confidence 46789999999999999876544 3322 111 122334789999999999999999965 999999987631
Q ss_pred -----------hhHHHHHHHHHHhCCc--ceEec---cc-ccc----cCCCCCCCCchhHHHHHHHHHH----HHHHHcC
Q 026978 72 -----------LDQLEIVHAIKVAGNI--KRFLP---SE-FGC----EEDKVRPLPPFEAYLEKKRIVR----RAIEAAQ 126 (230)
Q Consensus 72 -----------~~~~~ll~Aa~~ag~V--kr~v~---S~-~g~----~~~~~~~~~p~~~~~~~K~~~e----~~l~~~g 126 (230)
-++.+|+||.+--| - -||.. |+ ||. +..+..|+.|.+||..+|.-+. +|-+++|
T Consensus 96 e~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYg 174 (345)
T COG1089 96 EQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 174 (345)
T ss_pred cCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcC
Confidence 37899999999987 4 24553 32 884 2345678888889988886543 4444455
Q ss_pred C
Q 026978 127 I 127 (230)
Q Consensus 127 l 127 (230)
|
T Consensus 175 l 175 (345)
T COG1089 175 L 175 (345)
T ss_pred c
Confidence 5
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-07 Score=74.11 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=83.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~---- 70 (230)
++++|+++|++|+++.|+.... ...+++.+|++|.+++.++++ ++|+|||+++...
T Consensus 19 ia~~l~~~G~~v~~~~r~~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~ 84 (234)
T PRK07577 19 LSLRLANLGHQVIGIARSAIDD--------------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPL 84 (234)
T ss_pred HHHHHHHCCCEEEEEeCCcccc--------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCCh
Confidence 4688999999999999975421 123688999999998888776 6899999998631
Q ss_pred ---------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 71 ---------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 71 ---------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
+.+ ...++.++++.+ .+++|. |+.+... . + ....|..+|...+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~--~--~~~~Y~~sK~a~~~~~~~~a~e~~ 158 (234)
T PRK07577 85 GKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFG-A--L--DRTSYSAAKSALVGCTRTWALELA 158 (234)
T ss_pred HHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccC-C--C--CchHHHHHHHHHHHHHHHHHHHHH
Confidence 112 334456667777 788774 3322110 0 1 124677899887766543
Q ss_pred -cCCCEEEEeccccchh
Q 026978 125 -AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 159 ~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 159 EYGITVNAVAPGPIETE 175 (234)
T ss_pred hhCcEEEEEecCcccCc
Confidence 5899999999988643
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-07 Score=77.07 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
+++.|+++|++|+++ .|+... .+. .+.++ ...+.++.+|++|++++.++++ ++|+|||+++..
T Consensus 20 ~a~~l~~~g~~v~~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~ 93 (250)
T PRK08063 20 IALRLAEEGYDIAVNYARSRKA------AEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG 93 (250)
T ss_pred HHHHHHHCCCEEEEEcCCCHHH------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 478899999998774 665321 111 11221 2357889999999999888777 479999999853
Q ss_pred C-------------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 Q-------------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
. ..+..++++++. +.+ .++||. |+.+.... ..+...|..+|..++.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~----~~~~~~y~~sK~a~~~~~~~~ 168 (250)
T PRK08063 94 VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRY----LENYTTVGVSKAALEALTRYL 168 (250)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccC----CCCccHHHHHHHHHHHHHHHH
Confidence 1 223445555554 455 568875 54433211 11234677899999887753
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.++.++.|+||++...
T Consensus 169 ~~~~~~~~i~v~~i~pg~v~t~ 190 (250)
T PRK08063 169 AVELAPKGIAVNAVSGGAVDTD 190 (250)
T ss_pred HHHHhHhCeEEEeEecCcccCc
Confidence 5899999999987643
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.9e-07 Score=79.29 Aligned_cols=90 Identities=10% Similarity=0.126 Sum_probs=60.5
Q ss_pred cCCCHHHHHHHhc--CCCEEEEcCCCC------------------ChhhHHHHHHHHHHhCCcceEecc---ccccc---
Q 026978 45 ELDEHKKIVSILK--EVDVVISTVAYP------------------QFLDQLEIVHAIKVAGNIKRFLPS---EFGCE--- 98 (230)
Q Consensus 45 D~~d~~~L~~al~--g~D~Vi~~~~~~------------------~~~~~~~ll~Aa~~ag~Vkr~v~S---~~g~~--- 98 (230)
|+.|.+.+...++ ++|+|||+++.. ++.++.+|+++|++.| +++++.| .||..
T Consensus 42 ~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~~ 120 (298)
T PLN02778 42 RLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDAH 120 (298)
T ss_pred ccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCCC
Confidence 3445555666666 789999999853 1347899999999999 9887763 25421
Q ss_pred -------CCCCC-CCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 99 -------EDKVR-PLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 99 -------~~~~~-~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
..+.. +..|...|..+|..+|.+++... +...+|+++
T Consensus 121 p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~ 165 (298)
T PLN02778 121 PLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRM 165 (298)
T ss_pred CcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecc
Confidence 11222 22233567899999999998643 455677654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.3e-07 Score=74.83 Aligned_cols=133 Identities=13% Similarity=0.138 Sum_probs=84.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh----cCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l----~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~ 69 (230)
+++.|+++|++|+++.|+..... + ....+ ....+.++.+|++|.+++.++++. +|+|||+++..
T Consensus 20 ~a~~l~~~g~~v~~~~r~~~~~~---~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 20 LVKAILEAGGIVIAADIDKEALN---E--LLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred HHHHHHHCCCEEEEEecChHHHH---H--HHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence 47889999999999998743210 0 11122 123466789999999999888764 79999998632
Q ss_pred ----------------------Ch----hhHHHHHHHHHHhCCcceEec-c-cccccCC-----CCCCCCchhHHHHHHH
Q 026978 70 ----------------------QF----LDQLEIVHAIKVAGNIKRFLP-S-EFGCEED-----KVRPLPPFEAYLEKKR 116 (230)
Q Consensus 70 ----------------------~~----~~~~~ll~Aa~~ag~Vkr~v~-S-~~g~~~~-----~~~~~~p~~~~~~~K~ 116 (230)
++ ...+.+++++++.+ .+++|. | ..|.... +..+..+...|..+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 173 (256)
T PRK09186 95 NKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKA 173 (256)
T ss_pred cccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhccccccCCcchhHHHHH
Confidence 01 22345666777777 788875 3 3332110 1111111125778898
Q ss_pred HHHHHHHH-------cCCCEEEEeccccch
Q 026978 117 IVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 117 ~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
..+.+.+. .++.++.++||.+..
T Consensus 174 a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~ 203 (256)
T PRK09186 174 GIIHLTKYLAKYFKDSNIRVNCVSPGGILD 203 (256)
T ss_pred HHHHHHHHHHHHhCcCCeEEEEEecccccC
Confidence 87766542 579999999997653
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.2e-07 Score=75.86 Aligned_cols=126 Identities=10% Similarity=0.077 Sum_probs=81.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
+++.|+++|++|++++|+.. +.+.+. .+ ..++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 la~~l~~~G~~v~~~~r~~~------~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 92 (273)
T PRK07825 21 TARALAALGARVAIGDLDEA------LAKETAAEL--GLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVG 92 (273)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh--ccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 47889999999999999743 222211 12 248899999999998766554 5799999998531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHH------
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI------ 122 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l------ 122 (230)
+.+ ...++..+++.| ..++|. |+.+..... .....|..+|..++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~~l~~e 167 (273)
T PRK07825 93 PFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPV----PGMATYCASKHAVVGFTDAARLE 167 (273)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCC----CCCcchHHHHHHHHHHHHHHHHH
Confidence 112 234555666777 778774 433221111 11235677887665443
Q ss_pred -HHcCCCEEEEeccccch
Q 026978 123 -EAAQIPYTFVSANLCGA 139 (230)
Q Consensus 123 -~~~gl~~tilr~g~~~~ 139 (230)
+..|+.++.|+||++..
T Consensus 168 l~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 168 LRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred hhccCcEEEEEeCCcCcc
Confidence 33699999999988754
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.1e-07 Score=73.63 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=84.2
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCC-C------
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAY-P------ 69 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~-~------ 69 (230)
+++.|+++|+ .|++++|+.... + . ...+++++.+|+.|.+++.++++ .+|+|||+++. .
T Consensus 22 la~~l~~~G~~~V~~~~r~~~~~------~---~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 91 (238)
T PRK08264 22 FVEQLLARGAAKVYAAARDPESV------T---D-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLL 91 (238)
T ss_pred HHHHHHHCCcccEEEEecChhhh------h---h-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccc
Confidence 4788999998 999999975321 1 1 13578999999999999988887 47999999987 2
Q ss_pred -------------ChhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 70 -------------QFLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 70 -------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
++.+..++++++. +.+ ..+||. |+.+... +..+...|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~----~~~~~~~y~~sK~a~~~~~~~l~~~~~~ 166 (238)
T PRK08264 92 EGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWV----NFPNLGTYSASKAAAWSLTQALRAELAP 166 (238)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcc----CCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 1234556666654 455 677774 3322111 111234677899888766543
Q ss_pred cCCCEEEEeccccc
Q 026978 125 AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ~gl~~tilr~g~~~ 138 (230)
.+++++.++||...
T Consensus 167 ~~i~~~~v~pg~v~ 180 (238)
T PRK08264 167 QGTRVLGVHPGPID 180 (238)
T ss_pred cCeEEEEEeCCccc
Confidence 48999999998764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.3e-07 Score=76.17 Aligned_cols=131 Identities=16% Similarity=0.115 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|++++|+.. +.+. ...+ .+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 42 ~a~~L~~~G~~Vv~~~R~~~------~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~ 113 (315)
T PRK06196 42 TTRALAQAGAHVIVPARRPD------VAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP 113 (315)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC
Confidence 47889999999999999743 2221 1122 348899999999998877664 689999999853
Q ss_pred --------------Chhh----HHHHHHHHHHhCCcceEec-ccccccC-----CC---CCCCCchhHHHHHHHHHHHHH
Q 026978 70 --------------QFLD----QLEIVHAIKVAGNIKRFLP-SEFGCEE-----DK---VRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 70 --------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~-----~~---~~~~~p~~~~~~~K~~~e~~l 122 (230)
++.+ ...++.++++.+ ..|+|. |+.+... +. ..+..+...|..+|...+.+.
T Consensus 114 ~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~ 192 (315)
T PRK06196 114 ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFA 192 (315)
T ss_pred CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHH
Confidence 1122 345566677776 678774 4332110 00 012223346778998877654
Q ss_pred HH-------cCCCEEEEeccccchh
Q 026978 123 EA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~~ 140 (230)
+. .|+.++.|+||+....
T Consensus 193 ~~la~~~~~~gi~v~~v~PG~v~t~ 217 (315)
T PRK06196 193 VHLDKLGKDQGVRAFSVHPGGILTP 217 (315)
T ss_pred HHHHHHhcCCCcEEEEeeCCcccCC
Confidence 32 5899999999988654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.5e-07 Score=74.33 Aligned_cols=130 Identities=13% Similarity=0.179 Sum_probs=83.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|++++|+..... + ....+. ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 19 la~~l~~~g~~v~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 93 (250)
T TIGR03206 19 TCRRFAEEGAKVAVFDLNREAAE---K--VAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKF 93 (250)
T ss_pred HHHHHHHCCCEEEEecCCHHHHH---H--HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999998753210 1 111121 2458899999999999888776 589999999742
Q ss_pred -----------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 -----------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++ ++.+ .+++|. |+.+..... + ....|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~--~--~~~~Y~~sK~a~~~~~~~la~ 168 (250)
T TIGR03206 94 GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGS--S--GEAVYAACKGGLVAFSKTMAR 168 (250)
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCC--C--CCchHHHHHHHHHHHHHHHHH
Confidence 123344554444 4566 678774 332221111 0 123566888776655543
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.++++++++||.+...
T Consensus 169 ~~~~~~i~v~~v~pg~~~~~ 188 (250)
T TIGR03206 169 EHARHGITVNVVCPGPTDTA 188 (250)
T ss_pred HHhHhCcEEEEEecCcccch
Confidence 4899999999988654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.6e-08 Score=77.91 Aligned_cols=125 Identities=17% Similarity=0.148 Sum_probs=94.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---------h
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ---------F 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~---------~ 71 (230)
|++...+.||+|..|.|+..+. .+... ...++++.+|.....-+...+.|...|+.+++... -
T Consensus 68 vlk~A~~vv~svgilsen~~k~-------~l~sw-~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing 139 (283)
T KOG4288|consen 68 VLKNATNVVHSVGILSENENKQ-------TLSSW-PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRING 139 (283)
T ss_pred HHHHHHhhceeeeEeecccCcc-------hhhCC-CcccchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhcc
Confidence 4667778899999999986532 11222 34689999998877778889999999999998752 2
Q ss_pred hhHHHHHHHHHHhCCcceEec-c--cccccCCCCCCCCchhHHHHHHHHHHHHHHH-cCCCEEEEeccccchh
Q 026978 72 LDQLEIVHAIKVAGNIKRFLP-S--EFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-AQIPYTFVSANLCGAY 140 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~v~-S--~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-~gl~~tilr~g~~~~~ 140 (230)
+...+-+.||.++| |+||++ | .||... +-| ..|+..|+++|..|.. .+..-.++|||+.++.
T Consensus 140 ~ani~a~kaa~~~g-v~~fvyISa~d~~~~~-----~i~-rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~ 205 (283)
T KOG4288|consen 140 TANINAVKAAAKAG-VPRFVYISAHDFGLPP-----LIP-RGYIEGKREAEAELLKKFRFRGIILRPGFIYGT 205 (283)
T ss_pred HhhHHHHHHHHHcC-CceEEEEEhhhcCCCC-----ccc-hhhhccchHHHHHHHHhcCCCceeeccceeecc
Confidence 34567788999999 999996 3 255431 123 3688999999988765 6788899999999885
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-07 Score=76.87 Aligned_cols=132 Identities=11% Similarity=0.155 Sum_probs=83.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
|++.|+++|++|.+++|+..... ...+.+.... ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 la~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~ 100 (276)
T PRK05875 23 VAAGLVAAGAAVMIVGRNPDKLA--AAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETI 100 (276)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHH--HHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCC
Confidence 47889999999999999753211 0011111110 1357889999999998888776 679999999742
Q ss_pred -----------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 -----------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++.+ .+ ..+|+. |+.+.... . .+...|..+|...+.+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~--~--~~~~~Y~~sK~a~~~~~~~~~~ 175 (276)
T PRK05875 101 GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNT--H--RWFGAYGVTKSAVDHLMKLAAD 175 (276)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCC--C--CCCcchHHHHHHHHHHHHHHHH
Confidence 12234456665544 33 346664 33222111 1 1234677899998887764
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.++.++.|+||++..
T Consensus 176 ~~~~~~i~v~~i~Pg~v~t 194 (276)
T PRK05875 176 ELGPSWVRVNSIRPGLIRT 194 (276)
T ss_pred HhcccCeEEEEEecCccCC
Confidence 479999999997753
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.2e-07 Score=74.44 Aligned_cols=130 Identities=8% Similarity=0.199 Sum_probs=85.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC--CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI--GVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|+++.|+..... +....++.. .+.++.+|++|.+++.++++ ..|+|||+++...
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~ 100 (255)
T PRK07523 26 LAEGLAQAGAEVILNGRDPAKLA-----AAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR 100 (255)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHH-----HHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 47889999999999999753210 111223222 37788999999999888876 4799999998631
Q ss_pred ------------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++.+ .+ .+++|. |+...... ......|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~----~~~~~~y~~sK~a~~~~~~~~a~ 175 (255)
T PRK07523 101 TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALA----RPGIAPYTATKGAVGNLTKGMAT 175 (255)
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccC----CCCCccHHHHHHHHHHHHHHHHH
Confidence 2345556666654 45 678774 43221111 11223577889887776543
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||++...
T Consensus 176 e~~~~gi~v~~i~pg~~~t~ 195 (255)
T PRK07523 176 DWAKHGLQCNAIAPGYFDTP 195 (255)
T ss_pred HhhHhCeEEEEEEECcccCc
Confidence 5899999999987653
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.7e-07 Score=73.13 Aligned_cols=130 Identities=12% Similarity=0.202 Sum_probs=82.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|++++|+..... . . ....++..+ +.++.+|++|.+++.+++++ +|+|||+++...
T Consensus 14 la~~l~~~G~~v~~~~r~~~~~~-~-~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 89 (239)
T TIGR01830 14 IALKLAKEGAKVIITYRSSEEGA-E-E--VVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRD 89 (239)
T ss_pred HHHHHHHCCCEEEEEeCCchhHH-H-H--HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 47889999999999999752110 0 0 111222223 67899999999998887764 599999998631
Q ss_pred ------------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++.. .+ .++|+. |+.+..... + +...|..+|...+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~--~--~~~~y~~~k~a~~~~~~~l~~ 164 (239)
T TIGR01830 90 NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGN--A--GQANYAASKAGVIGFTKSLAK 164 (239)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCC--C--CCchhHHHHHHHHHHHHHHHH
Confidence 2345667777765 45 568774 332211110 0 123566778766654432
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+.++.++||++..
T Consensus 165 ~~~~~g~~~~~i~pg~~~~ 183 (239)
T TIGR01830 165 ELASRNITVNAVAPGFIDT 183 (239)
T ss_pred HHhhcCeEEEEEEECCCCC
Confidence 589999999987643
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=8e-07 Score=71.75 Aligned_cols=124 Identities=16% Similarity=0.251 Sum_probs=81.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
+++.|+++ ++|++++|+.. +.+.+... ..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 19 l~~~l~~~-~~V~~~~r~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~ 90 (227)
T PRK08219 19 IARELAPT-HTLLLGGRPAE------RLDELAAE-LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAES 90 (227)
T ss_pred HHHHHHhh-CCEEEEeCCHH------HHHHHHHH-hccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccC
Confidence 47789999 99999999743 22222111 2468999999999999999987 5899999998631
Q ss_pred ------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----cC-
Q 026978 71 ------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-----AQ- 126 (230)
Q Consensus 71 ------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-----~g- 126 (230)
+.+ ..++++++++.+ +++|. |+ .+.... .+...|..+|...+.+++. .+
T Consensus 91 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~-----~~~~~y~~~K~a~~~~~~~~~~~~~~~ 163 (227)
T PRK08219 91 TVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRAN-----PGWGSYAASKFALRALADALREEEPGN 163 (227)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcC-----CCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 111 445556666554 45553 33 332111 1223577888887766543 34
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
+.++.++||.+..
T Consensus 164 i~~~~i~pg~~~~ 176 (227)
T PRK08219 164 VRVTSVHPGRTDT 176 (227)
T ss_pred ceEEEEecCCccc
Confidence 8999999987654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.3e-07 Score=74.51 Aligned_cols=129 Identities=9% Similarity=0.136 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
|++.|+++|++|++++|+... .+.+. .+ ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 94 (257)
T PRK07067 22 VAERYLAEGARVVIADIKPAR------ARLAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMA 94 (257)
T ss_pred HHHHHHHcCCEEEEEcCCHHH------HHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 578899999999999997532 11111 22 3458889999999999888776 579999998753
Q ss_pred ----------------ChhhHHHHHHHHHHhC----CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ----------------QFLDQLEIVHAIKVAG----NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~ag----~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++.... .-.++|. |+.+..... .+...|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e 170 (257)
T PRK07067 95 PILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE----ALVSHYCATKAAVISYTQSAALA 170 (257)
T ss_pred CcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC----CCCchhhhhHHHHHHHHHHHHHH
Confidence 1345677777775432 0135553 432211111 1234677899887776543
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|++.+.|+||+....
T Consensus 171 ~~~~gi~v~~i~pg~v~t~ 189 (257)
T PRK07067 171 LIRHGINVNAIAPGVVDTP 189 (257)
T ss_pred hcccCeEEEEEeeCcccch
Confidence 6899999999987653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=8e-07 Score=73.55 Aligned_cols=127 Identities=17% Similarity=0.077 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|.+++|+.. +.+.+. .+....++++.+|++|.+++.++++ .+|+|||+++...
T Consensus 17 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~ 90 (260)
T PRK08267 17 TALLFAAEGWRVGAYDINEA------GLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG 90 (260)
T ss_pred HHHHHHHCCCeEEEEeCCHH------HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCC
Confidence 47889999999999999743 222221 1222468899999999998888766 4599999998641
Q ss_pred ------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+..... ....|..+|..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----~~~~Y~~sKaa~~~~~~~l~ 164 (260)
T PRK08267 91 GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQP-----GLAVYSATKFAVRGLTEALD 164 (260)
T ss_pred CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCC-----CchhhHHHHHHHHHHHHHHH
Confidence 23445565555 3444 456653 33 2221111 123566888887765543
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.+++++.|+||++..
T Consensus 165 ~~~~~~~i~v~~i~pg~~~t 184 (260)
T PRK08267 165 LEWRRHGIRVADVMPLFVDT 184 (260)
T ss_pred HHhcccCcEEEEEecCCcCC
Confidence 589999999998754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.9e-07 Score=73.77 Aligned_cols=129 Identities=12% Similarity=0.140 Sum_probs=84.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|++++|+..... +....+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 la~~l~~~g~~V~~~~r~~~~~~-----~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~ 90 (270)
T PRK05650 16 IALRWAREGWRLALADVNEEGGE-----ETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASG 90 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999999753210 0111222 2357789999999998887765 6899999998631
Q ss_pred ------------------hh----hHHHHHHHHHHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FL----DQLEIVHAIKVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+. ....++..+++.+ ..++|. |+. |... ......|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~-----~~~~~~Y~~sKaa~~~~~~~l~ 164 (270)
T PRK05650 91 GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQ-----GPAMSSYNVAKAGVVALSETLL 164 (270)
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCC-----CCCchHHHHHHHHHHHHHHHHH
Confidence 11 2233555567777 778774 332 2211 11223567888876654432
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.++||++...
T Consensus 165 ~e~~~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 165 VELADDEIGVHVVCPSFFQTN 185 (270)
T ss_pred HHhcccCcEEEEEecCccccC
Confidence 5899999999998754
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=9.2e-07 Score=72.28 Aligned_cols=128 Identities=14% Similarity=0.108 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~-------- 69 (230)
+++.|+++|++|++++|+.. +.+.+.. ..+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ~a~~l~~~g~~V~~~~r~~~------~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~ 96 (245)
T PRK07060 25 CAVALAQRGARVVAAARNAA------ALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDM 96 (245)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence 46788999999999999742 2222211 2357889999999999888887 489999999863
Q ss_pred -----------ChhhHHHHHHHHHHh----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cC
Q 026978 70 -----------QFLDQLEIVHAIKVA----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQ 126 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~g 126 (230)
++.+..++++++.+. +..++||. |+.+..... .+...|..+|..++.+++. .+
T Consensus 97 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~~~a~~~~~~~ 172 (245)
T PRK07060 97 TAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL----PDHLAYCASKAALDAITRVLCVELGPHG 172 (245)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----CCCcHhHHHHHHHHHHHHHHHHHHhhhC
Confidence 123455666666542 21256764 432211110 1224677899888876653 47
Q ss_pred CCEEEEeccccchh
Q 026978 127 IPYTFVSANLCGAY 140 (230)
Q Consensus 127 l~~tilr~g~~~~~ 140 (230)
++.+.++||++...
T Consensus 173 i~v~~v~pg~v~~~ 186 (245)
T PRK07060 173 IRVNSVNPTVTLTP 186 (245)
T ss_pred eEEEEEeeCCCCCc
Confidence 99999999987653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.6e-07 Score=72.73 Aligned_cols=131 Identities=14% Similarity=0.186 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
|++.|+++|++|.+++|...... .+..+.++ ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 18 la~~L~~~g~~vi~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 93 (256)
T PRK12745 18 IARALAAAGFDLAINDRPDDEEL----AATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVK 93 (256)
T ss_pred HHHHHHHCCCEEEEEecCchhHH----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence 47889999999999998743210 11112222 2357899999999988877655 579999999752
Q ss_pred -------------------ChhhHHHHHHHHHHh----CC-----cceEec-ccccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIKVA----GN-----IKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~a----g~-----Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
++.+..++++++.+. .. +++||. |+....... .+...|..+|..++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~ 169 (256)
T PRK12745 94 VRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS----PNRGEYCISKAGLSM 169 (256)
T ss_pred CCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----CCCcccHHHHHHHHH
Confidence 123456666665432 10 345664 332211100 122356788888876
Q ss_pred HHHH-------cCCCEEEEeccccch
Q 026978 121 AIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~ 139 (230)
+++. .|++.+.|+||.+..
T Consensus 170 ~~~~l~~~~~~~gi~v~~i~pg~v~t 195 (256)
T PRK12745 170 AAQLFAARLAEEGIGVYEVRPGLIKT 195 (256)
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCcC
Confidence 6543 589999999998764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.9e-07 Score=92.05 Aligned_cols=136 Identities=16% Similarity=0.204 Sum_probs=93.4
Q ss_pred CHHHHhhCC----CeEEEEEcCCCCCCCcchHhhhhh-hc---------CCCeEEEEecCC------CHHHHHHHhcCCC
Q 026978 1 MVKASVSSG----HKTFVYARPVTQNSRPSKLEIHKE-FQ---------GIGVTIIEGELD------EHKKIVSILKEVD 60 (230)
Q Consensus 1 lv~~Ll~~g----~~V~~l~R~~~~~~~p~k~~~l~~-l~---------~~gv~vv~gD~~------d~~~L~~al~g~D 60 (230)
|++.|++++ +.|++++|..+... ..+.+.. +. ...++++.||++ +.+.+..+.+++|
T Consensus 987 l~~~Ll~~~~~~~~~V~~l~R~~~~~~---~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d 1063 (1389)
T TIGR03443 987 ILRDLLTRRSNSNFKVFAHVRAKSEEA---GLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVD 1063 (1389)
T ss_pred HHHHHHhcCCCCCcEEEEEECcCChHH---HHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHHhcCC
Confidence 467888877 88999999754321 1111111 00 136899999997 4566778888999
Q ss_pred EEEEcCCCC------------ChhhHHHHHHHHHHhCCcceEec-cc---cccc----------------CCCCCC----
Q 026978 61 VVISTVAYP------------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----------------EDKVRP---- 104 (230)
Q Consensus 61 ~Vi~~~~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----------------~~~~~~---- 104 (230)
+|||+++.. ++.++.+++++|++.+ +++|++ |+ ||.. ..+...
T Consensus 1064 ~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 1142 (1389)
T TIGR03443 1064 VIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGS 1142 (1389)
T ss_pred EEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccc
Confidence 999999864 3568899999999998 899874 33 4320 001000
Q ss_pred -CCchhHHHHHHHHHHHHHHH---cCCCEEEEeccccchh
Q 026978 105 -LPPFEAYLEKKRIVRRAIEA---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 105 -~~p~~~~~~~K~~~e~~l~~---~gl~~tilr~g~~~~~ 140 (230)
..+...|..+|..+|.++.. .|++++++|||..++.
T Consensus 1143 ~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1143 SKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred cccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccC
Confidence 11223578999999998865 5899999999888764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=72.94 Aligned_cols=126 Identities=16% Similarity=0.206 Sum_probs=84.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|++++|+... .+.+ ..+. ..++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 26 ~a~~l~~~G~~Vi~~~r~~~~------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 99 (263)
T PRK07814 26 IALAFAEAGADVLIAARTESQ------LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTM 99 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 468899999999999997432 1111 1121 2457889999999999887765 679999999842
Q ss_pred ------------------ChhhHHHHHHHHHH-----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIKV-----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~-----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++.. .+ .+++|. |+ .|.... .+...|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 173 (263)
T PRK07814 100 PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAG-----RGFAAYGTAKAALAHYTRL 173 (263)
T ss_pred CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCC-----CCCchhHHHHHHHHHHHHH
Confidence 12356677777753 34 466764 33 332111 1234678999998887764
Q ss_pred ------cCCCEEEEeccccc
Q 026978 125 ------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ------~gl~~tilr~g~~~ 138 (230)
.++..+.|+||+..
T Consensus 174 ~~~e~~~~i~v~~i~Pg~v~ 193 (263)
T PRK07814 174 AALDLCPRIRVNAIAPGSIL 193 (263)
T ss_pred HHHHHCCCceEEEEEeCCCc
Confidence 24778888888764
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-06 Score=72.63 Aligned_cols=132 Identities=13% Similarity=0.206 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|++++|+..... ...+.++.. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 17 la~~l~~~g~~Vi~~~r~~~~~~--~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 93 (263)
T PRK06181 17 LAVRLARAGAQLVLAARNETRLA--SLAQELADH-GGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSR 93 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccc
Confidence 46789999999999999743210 001111111 2357889999999999888776 6799999997531
Q ss_pred -----------------hhhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 -----------------FLDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++.. .+ .+++|. |+..... +..+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~Y~~sK~~~~~~~~~l~~~~ 168 (263)
T PRK06181 94 FDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLT----GVPTRSGYAASKHALHGFFDSLRIEL 168 (263)
T ss_pred hhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccC----CCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 2345566676642 23 456653 3322111 011234677899888776643
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||+....
T Consensus 169 ~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 169 ADDGVAVTVVCPGFVATD 186 (263)
T ss_pred hhcCceEEEEecCccccC
Confidence 5899999999987643
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.4e-07 Score=73.00 Aligned_cols=128 Identities=13% Similarity=0.163 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
|++.|+++|++|++++|+... .+. .+.++ ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 la~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 96 (250)
T PRK12939 23 FAEALAEAGATVAFNDGLAAE------ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITN 96 (250)
T ss_pred HHHHHHHcCCEEEEEeCCHHH------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999999887432 111 11222 2357899999999999887774 689999999863
Q ss_pred ------------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++.. .+ ..+||. |+.+..... .....|..+|...+.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~y~~sK~~~~~~~~~l~ 171 (250)
T PRK12939 97 SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGA----PKLGAYVASKGAVIGMTRSLA 171 (250)
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCC----CCcchHHHHHHHHHHHHHHHH
Confidence 12345566666544 33 347774 332211110 1123567888888776653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++.++.|+||++..
T Consensus 172 ~~~~~~~i~v~~v~pg~v~t 191 (250)
T PRK12939 172 RELGGRGITVNAIAPGLTAT 191 (250)
T ss_pred HHHhhhCEEEEEEEECCCCC
Confidence 578899999997643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.2e-07 Score=72.53 Aligned_cols=129 Identities=9% Similarity=0.104 Sum_probs=81.3
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|++.|+++|++|+++ .|+..... + ....+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 la~~l~~~g~~v~~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 95 (247)
T PRK05565 21 IAELLAKEGAKVVIAYDINEEAAQ---E--LLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN 95 (247)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHH---H--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence 467889999999998 88643210 0 111121 2348889999999999888776 7899999998631
Q ss_pred -------------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 71 -------------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
+.+..++++++. +.+ .++||. |+.+...... ....|..+|...+.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~----~~~~y~~sK~a~~~~~~~~~ 170 (247)
T PRK05565 96 FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGAS----CEVLYSASKGAVNAFTKALA 170 (247)
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCC----CccHHHHHHHHHHHHHHHHH
Confidence 223444555544 455 566764 4322211110 12256677766555443
Q ss_pred ----HcCCCEEEEeccccch
Q 026978 124 ----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ----~~gl~~tilr~g~~~~ 139 (230)
..|+.++.++||++..
T Consensus 171 ~~~~~~gi~~~~v~pg~v~t 190 (247)
T PRK05565 171 KELAPSGIRVNAVAPGAIDT 190 (247)
T ss_pred HHHHHcCeEEEEEEECCccC
Confidence 2689999999998754
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.6e-07 Score=74.18 Aligned_cols=127 Identities=12% Similarity=0.145 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|+.|.+++|+.... .+ ....+. ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 26 la~~L~~~G~~V~~~~r~~~~~---~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~ 100 (274)
T PRK07775 26 TAIELAAAGFPVALGARRVEKC---EE--LVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYF 100 (274)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH---HH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 5789999999999999864321 01 111121 1346788999999999987776 5799999998631
Q ss_pred ------------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++. +.+ ..+||. |+ .+.... .+...|..+|...+.+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~l~~~~~ 174 (274)
T PRK07775 101 GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQR-----PHMGAYGAAKAGLEAMVTNLQ 174 (274)
T ss_pred cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC-----CCcchHHHHHHHHHHHHHHHH
Confidence 234455655543 344 456774 33 222111 1223577899888877654
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|++.++++||++.
T Consensus 175 ~~~~~~gi~v~~v~pG~~~ 193 (274)
T PRK07775 175 MELEGTGVRASIVHPGPTL 193 (274)
T ss_pred HHhcccCeEEEEEeCCccc
Confidence 38999999999864
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-06 Score=70.03 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=84.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc-CCCeEEEEecCCCHHHHHHHhcC---CCEEEEcCCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIEGELDEHKKIVSILKE---VDVVISTVAYPQ----- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~-~~gv~vv~gD~~d~~~L~~al~g---~D~Vi~~~~~~~----- 70 (230)
++++|+++|++|++++|+... .+.+ ..++ ..+++++.+|++|.+++.++++. +|++||+++...
T Consensus 13 ~a~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 86 (230)
T PRK07041 13 LARAFAAEGARVTIASRSRDR------LAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVR 86 (230)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChh
Confidence 478899999999999997432 1111 1121 24688999999999999998874 699999998531
Q ss_pred --------------hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----cCCCEE
Q 026978 71 --------------FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-----AQIPYT 130 (230)
Q Consensus 71 --------------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-----~gl~~t 130 (230)
+.+..+++++....+ .+++|. |+.+.... ..+...|..+|..++.+.+. .++..+
T Consensus 87 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~ 161 (230)
T PRK07041 87 ALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRP----SASGVLQGAINAALEALARGLALELAPVRVN 161 (230)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCC----CCcchHHHHHHHHHHHHHHHHHHHhhCceEE
Confidence 224456666655555 678775 33222111 11234677899998887765 356777
Q ss_pred EEeccccc
Q 026978 131 FVSANLCG 138 (230)
Q Consensus 131 ilr~g~~~ 138 (230)
.++||++.
T Consensus 162 ~i~pg~~~ 169 (230)
T PRK07041 162 TVSPGLVD 169 (230)
T ss_pred EEeecccc
Confidence 88888664
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=8e-07 Score=72.81 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC----CCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE----VDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g----~D~Vi~~~~~~------- 69 (230)
++++|+++|++|++++|+..... +-.+.+......+++++.+|++|.+++.++++. +|+|||+++..
T Consensus 17 ~a~~l~~~G~~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~ 94 (243)
T PRK07102 17 CARRYAAAGARLYLAARDVERLE--RLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACE 94 (243)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHH--HHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCccccc
Confidence 47889999999999999854211 001111111123688999999999988877664 59999998753
Q ss_pred ------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH-------H
Q 026978 70 ------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE-------A 124 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-------~ 124 (230)
++.+..++++++. +.+ .+++|. |+ .+... .. ....|..+|..++.+.+ .
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~----~~~~Y~~sK~a~~~~~~~l~~el~~ 168 (243)
T PRK07102 95 ADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRG-RA----SNYVYGSAKAALTAFLSGLRNRLFK 168 (243)
T ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCC-CC----CCcccHHHHHHHHHHHHHHHHHhhc
Confidence 1234455555544 345 677774 33 33211 11 12356678877665543 3
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.|+.++.++||+...
T Consensus 169 ~gi~v~~v~pg~v~t 183 (243)
T PRK07102 169 SGVHVLTVKPGFVRT 183 (243)
T ss_pred cCcEEEEEecCcccC
Confidence 589999999988754
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.1e-06 Score=70.66 Aligned_cols=128 Identities=11% Similarity=0.143 Sum_probs=83.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|+.|+++.|+.... +....+....+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 31 la~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 104 (255)
T PRK06841 31 IAELFAAKGARVALLDRSEDVA------EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAP 104 (255)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH------HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 4678999999999999975321 11122323456789999999998887765 5799999998631
Q ss_pred ----------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++.. .+ .+|||. |+.+..... + ....|..+|...+.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--~--~~~~Y~~sK~a~~~~~~~la~e~ 179 (255)
T PRK06841 105 AEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL--E--RHVAYCASKAGVVGMTKVLALEW 179 (255)
T ss_pred hhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC--C--CCchHHHHHHHHHHHHHHHHHHH
Confidence 2345666666553 45 577774 332211110 0 123577888887765543
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||++..
T Consensus 180 ~~~gi~v~~v~pg~v~t 196 (255)
T PRK06841 180 GPYGITVNAISPTVVLT 196 (255)
T ss_pred HhhCeEEEEEEeCcCcC
Confidence 589999999988754
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-06 Score=73.18 Aligned_cols=148 Identities=10% Similarity=0.108 Sum_probs=87.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|++|++++|+..... +....+.. ..+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 la~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~ 96 (287)
T PRK06194 22 FARIGAALGMKLVLADVQQDALD-----RAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG 96 (287)
T ss_pred HHHHHHHCCCEEEEEeCChHHHH-----HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999999743211 11122222 246779999999999988877 4799999998631
Q ss_pred ------------------hhhHHHHHHH----HHHhCCc------ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 71 ------------------FLDQLEIVHA----IKVAGNI------KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 71 ------------------~~~~~~ll~A----a~~ag~V------kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
+.+..+++++ +++++ . .++|. |+ .+.... .+...|..+|...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~ 170 (287)
T PRK06194 97 GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYEGHIVNTASMAGLLAP-----PAMGIYNVSKHAVVS 170 (287)
T ss_pred CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCCeEEEEeCChhhccCC-----CCCcchHHHHHHHHH
Confidence 2234444444 55555 3 36664 33 232111 122357789998887
Q ss_pred HHHH---------cCCCEEEEeccccchhhcccccCCCCCCCcEEEecCCCcc
Q 026978 121 AIEA---------AQIPYTFVSANLCGAYFVNVLLRPFESHDDVVVYGSGEAK 164 (230)
Q Consensus 121 ~l~~---------~gl~~tilr~g~~~~~~~~~~~~~~~~~~~~~i~g~G~~~ 164 (230)
+.+. .++..+.+.||+....... .... +...++|+|.+.
T Consensus 171 ~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~---~~~~--~~~~~~~~~~~~ 218 (287)
T PRK06194 171 LTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ---SERN--RPADLANTAPPT 218 (287)
T ss_pred HHHHHHHHHhhcCCCeEEEEEEeCcccCcccc---cccc--CchhcccCcccc
Confidence 7653 2355566677655332211 0111 445667776654
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.3e-07 Score=73.11 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=84.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~~-- 70 (230)
+++.|+++|++|++++|+.. +.+ .+...+++.+.+|++|.+++.++++ .+|.+||+++...
T Consensus 18 la~~l~~~g~~v~~~~r~~~------~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~ 88 (256)
T PRK08017 18 AALELKRRGYRVLAACRKPD------DVA---RMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYG 88 (256)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HhH---HHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCcc
Confidence 47889999999999999743 222 2223578999999999888766543 4689999987531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---- 123 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---- 123 (230)
+.+ ...+++++++.+ .+++|. |.+|..... ....|..+|...+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~-----~~~~Y~~sK~~~~~~~~~l~~ 162 (256)
T PRK08017 89 PLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTP-----GRGAYAASKYALEAWSDALRM 162 (256)
T ss_pred chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCC-----CccHHHHHHHHHHHHHHHHHH
Confidence 111 233577888887 788764 334432111 12357789988876543
Q ss_pred ---HcCCCEEEEeccccchh
Q 026978 124 ---AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~~ 140 (230)
..++++++++||.+...
T Consensus 163 ~~~~~~i~v~~v~pg~~~t~ 182 (256)
T PRK08017 163 ELRHSGIKVSLIEPGPIRTR 182 (256)
T ss_pred HHhhcCCEEEEEeCCCcccc
Confidence 36899999999887543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-06 Score=72.31 Aligned_cols=132 Identities=11% Similarity=0.114 Sum_probs=83.2
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~--- 70 (230)
++++|+++| ++|++++|+.+... .+-.+.++.....+++++.+|+.|.+++.++++ +.|++|++++...
T Consensus 24 la~~l~~~gg~~V~~~~r~~~~~~-~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~ 102 (253)
T PRK07904 24 ICERYLKNAPARVVLAALPDDPRR-DAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAE 102 (253)
T ss_pred HHHHHHhcCCCeEEEEeCCcchhH-HHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchh
Confidence 478899985 99999999865310 000111222112358899999999887655443 6899999887631
Q ss_pred --h------------------hhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH-------
Q 026978 71 --F------------------LDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA------- 121 (230)
Q Consensus 71 --~------------------~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~------- 121 (230)
. ...+.+++++++.+ ..++|. |+ .|.... + +...|..+|.....+
T Consensus 103 ~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~---~--~~~~Y~~sKaa~~~~~~~l~~e 176 (253)
T PRK07904 103 ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR---R--SNFVYGSTKAGLDGFYLGLGEA 176 (253)
T ss_pred hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC---C--CCcchHHHHHHHHHHHHHHHHH
Confidence 0 11245778888887 788774 43 332211 1 123466788776533
Q ss_pred HHHcCCCEEEEeccccch
Q 026978 122 IEAAQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~~gl~~tilr~g~~~~ 139 (230)
++..++++++++||++..
T Consensus 177 l~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 177 LREYGVRVLVVRPGQVRT 194 (253)
T ss_pred HhhcCCEEEEEeeCceec
Confidence 334789999999998765
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=8.3e-07 Score=73.27 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=83.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
|++.|+++|++|++++|+... .+. ...+...+++++.+|+.|.+++.++++ ++|+|||+++...
T Consensus 18 la~~L~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~ 91 (257)
T PRK07074 18 LARRFLAAGDRVLALDIDAAA------LAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAA 91 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 478899999999999997532 111 112323468899999999999988776 4799999998531
Q ss_pred -----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++ ++.+ .++||. |+ .+.. ... ...|..+|...+.+++.
T Consensus 92 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-~~~-----~~~y~~sK~a~~~~~~~~a~ 164 (257)
T PRK07074 92 SLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMA-ALG-----HPAYSAAKAGLIHYTKLLAV 164 (257)
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcC-CCC-----CcccHHHHHHHHHHHHHHHH
Confidence 22334444544 5566 567764 33 2211 111 12466788887766654
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+..+.++||++...
T Consensus 165 ~~~~~gi~v~~v~pg~v~t~ 184 (257)
T PRK07074 165 EYGRFGIRANAVAPGTVKTQ 184 (257)
T ss_pred HHhHhCeEEEEEEeCcCCcc
Confidence 4799999999987643
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-06 Score=71.74 Aligned_cols=129 Identities=20% Similarity=0.274 Sum_probs=81.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+... .+.+ ..+. ...++++.+|++|.+++.++++ ++|+|||+++.
T Consensus 18 la~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 91 (248)
T PRK08251 18 MAREFAAKGRDLALCARRTDR------LEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGI 91 (248)
T ss_pred HHHHHHHcCCEEEEEeCCHHH------HHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 468899999999999997532 1111 1111 2357889999999988877655 68999999975
Q ss_pred CC-------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 69 ~~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
.. +.+..++++++ ++.+ .++||. |+.+..... + .+...|..+|...+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--~-~~~~~Y~~sK~a~~~~~~~ 167 (248)
T PRK08251 92 GKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL--P-GVKAAYAASKAGVASLGEG 167 (248)
T ss_pred CCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC--C-CCcccHHHHHHHHHHHHHH
Confidence 31 22334444443 4566 678774 332211111 0 1223577899887765542
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.++.++.++||++..
T Consensus 168 l~~~~~~~~i~v~~v~pg~v~t 189 (248)
T PRK08251 168 LRAELAKTPIKVSTIEPGYIRS 189 (248)
T ss_pred HHHHhcccCcEEEEEecCcCcc
Confidence 478999999988753
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2e-06 Score=71.18 Aligned_cols=127 Identities=13% Similarity=0.202 Sum_probs=83.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCC-CeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGI-GVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~-gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~- 70 (230)
|++.|+++|++|++++|+.. +.+.+. .+... .+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 18 la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~ 91 (257)
T PRK07024 18 LAREYARQGATLGLVARRTD------ALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG 91 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC
Confidence 47889999999999999743 221111 12111 588999999999999887653 699999987521
Q ss_pred -------------------hhhHHH----HHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLE----IVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE-- 123 (230)
Q Consensus 71 -------------------~~~~~~----ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-- 123 (230)
+.+..+ ++.++++.+ ..++|. |..+..... ....|..+|...+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~-----~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 92 TLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLP-----GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred ccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC-----CCcchHHHHHHHHHHHHHH
Confidence 123333 444667777 677773 333321111 12357789988877653
Q ss_pred -----HcCCCEEEEeccccch
Q 026978 124 -----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -----~~gl~~tilr~g~~~~ 139 (230)
..|++++.++||+...
T Consensus 166 ~~e~~~~gi~v~~v~Pg~v~t 186 (257)
T PRK07024 166 RVELRPAGVRVVTIAPGYIRT 186 (257)
T ss_pred HHHhhccCcEEEEEecCCCcC
Confidence 3589999999998754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.3e-06 Score=70.10 Aligned_cols=127 Identities=14% Similarity=0.120 Sum_probs=84.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC----CCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE----VDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g----~D~Vi~~~~~~------- 69 (230)
++++|+++|++|.+++|+.. +.+.+... ..++.++.+|++|.+++.++++. .|.+||+++..
T Consensus 17 la~~L~~~G~~V~~~~r~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~ 89 (240)
T PRK06101 17 LALDYAKQGWQVIACGRNQS------VLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGK 89 (240)
T ss_pred HHHHHHhCCCEEEEEECCHH------HHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCC
Confidence 47889999999999999742 33322221 24688999999999999998886 47888888642
Q ss_pred ------------ChhhHHHHHHHHHHh--CCcceEe-cccccccCCCCCCCCchhHHHHHHHHHHHHHH-------HcCC
Q 026978 70 ------------QFLDQLEIVHAIKVA--GNIKRFL-PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE-------AAQI 127 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~a--g~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-------~~gl 127 (230)
++.+..++++++... . -+++| .|+.+.... .+ ....|..+|..++.+.+ ..|+
T Consensus 90 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~--~~--~~~~Y~asK~a~~~~~~~l~~e~~~~gi 164 (240)
T PRK06101 90 VDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASELA--LP--RAEAYGASKAAVAYFARTLQLDLRPKGI 164 (240)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhccC--CC--CCchhhHHHHHHHHHHHHHHHHHHhcCc
Confidence 123567778877652 2 24555 333221111 11 12357789988887654 3689
Q ss_pred CEEEEeccccch
Q 026978 128 PYTFVSANLCGA 139 (230)
Q Consensus 128 ~~tilr~g~~~~ 139 (230)
.++.++||+...
T Consensus 165 ~v~~v~pg~i~t 176 (240)
T PRK06101 165 EVVTVFPGFVAT 176 (240)
T ss_pred eEEEEeCCcCCC
Confidence 999999998754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.6e-06 Score=71.21 Aligned_cols=126 Identities=11% Similarity=0.066 Sum_probs=83.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|+++.|+..... + ....+. ..++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 la~~l~~~g~~vi~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 96 (250)
T PRK07774 22 YAEALAREGASVVVADINAEGAE---R--VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGG 96 (250)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH---H--HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCC
Confidence 47889999999999999753210 1 111221 2256788999999998877665 579999999852
Q ss_pred --------------------ChhhHHHHHHHHHHh----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 --------------------QFLDQLEIVHAIKVA----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 --------------------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++... + .++||. |+-+.. .+...|..+|..++.+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------~~~~~Y~~sK~a~~~~~~~ 168 (250)
T PRK07774 97 MKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW-------LYSNFYGLAKVGLNGLTQQ 168 (250)
T ss_pred CCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc-------CCccccHHHHHHHHHHHHH
Confidence 133566677776643 3 457764 332211 1223577899988877654
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.++..+.++||.+..
T Consensus 169 l~~~~~~~~i~v~~v~pg~~~t 190 (250)
T PRK07774 169 LARELGGMNIRVNAIAPGPIDT 190 (250)
T ss_pred HHHHhCccCeEEEEEecCcccC
Confidence 378899999987754
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.2e-06 Score=70.37 Aligned_cols=123 Identities=11% Similarity=0.136 Sum_probs=83.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|+++.|+... . ....++++.+|++|.+++.++++. +|+|||+++...
T Consensus 24 la~~l~~~G~~v~~~~~~~~~-----------~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 91 (252)
T PRK08220 24 VALAFVEAGAKVIGFDQAFLT-----------Q-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGA 91 (252)
T ss_pred HHHHHHHCCCEEEEEecchhh-----------h-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 478899999999999997511 1 134588999999999999888764 799999998631
Q ss_pred ----------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+...+++++. +.+ ..++|. |+.+... +..+...|..+|...+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~ 166 (252)
T PRK08220 92 TDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV----PRIGMAAYGASKAALTSLAKCVGLEL 166 (252)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc----CCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 223455666653 344 467764 4333211 111234577888887776643
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.++..+.++||++...
T Consensus 167 ~~~~i~v~~i~pg~v~t~ 184 (252)
T PRK08220 167 APYGVRCNVVSPGSTDTD 184 (252)
T ss_pred hHhCeEEEEEecCcCcch
Confidence 5899999999988654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.5e-06 Score=71.26 Aligned_cols=124 Identities=16% Similarity=0.220 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|++++|+.. +.+ .+...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 17 la~~l~~~G~~V~~~~r~~~------~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 87 (274)
T PRK05693 17 LADAFKAAGYEVWATARKAE------DVE---ALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGP 87 (274)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHH---HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 46789999999999999742 222 2334578899999999988877664 6799999998531
Q ss_pred ----------------hhhHHHHHHHHHH---hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 71 ----------------FLDQLEIVHAIKV---AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~---ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
+.+..++++++.. .+ ..++|. |..|.... + ....|..+|...+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~---~--~~~~Y~~sK~al~~~~~~l~~e~ 161 (274)
T PRK05693 88 LLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT---P--FAGAYCASKAAVHALSDALRLEL 161 (274)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC---C--CccHHHHHHHHHHHHHHHHHHHh
Confidence 1234455555432 23 345553 33332111 1 12357788888776543
Q ss_pred -HcCCCEEEEeccccch
Q 026978 124 -AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~ 139 (230)
..|+..+.++||+...
T Consensus 162 ~~~gi~v~~v~pg~v~t 178 (274)
T PRK05693 162 APFGVQVMEVQPGAIAS 178 (274)
T ss_pred hhhCeEEEEEecCcccc
Confidence 2689999999998753
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.1e-06 Score=68.61 Aligned_cols=127 Identities=12% Similarity=0.177 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-----CCCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-----EVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-----g~D~Vi~~~~~~------ 69 (230)
+++.|+++|++|++++|+.... +.+..+ .++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 17 la~~l~~~G~~V~~~~r~~~~~------~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 88 (225)
T PRK08177 17 LVDRLLERGWQVTATVRGPQQD------TALQAL--PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQS 88 (225)
T ss_pred HHHHHHhCCCEEEEEeCCCcch------HHHHhc--cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCC
Confidence 4788999999999999986432 122222 468889999999988877766 589999998753
Q ss_pred ---------------ChhhHHHHHHHHHHh---CCcceEe--cccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAIKVA---GNIKRFL--PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~a---g~Vkr~v--~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+...+++++... + ..+++ .|.+|....... .+...|..+|...+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~--~~~~~Y~~sK~a~~~~~~~l~~e~ 165 (225)
T PRK08177 89 AADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDG--GEMPLYKASKAALNSMTRSFVAEL 165 (225)
T ss_pred cccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCC--CCccchHHHHHHHHHHHHHHHHHh
Confidence 112445566655432 2 23444 244554221111 1122467899988877753
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.++..+.|+||++.
T Consensus 166 ~~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 166 GEPTLTVLSMHPGWVK 181 (225)
T ss_pred hcCCeEEEEEcCCcee
Confidence 46888888998764
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.7e-06 Score=71.16 Aligned_cols=129 Identities=12% Similarity=0.127 Sum_probs=82.2
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------------g~D~Vi~ 64 (230)
+++.|+++|+.|.++ .|+.... .+....+. ...++++.+|++|.+++.++++ ++|+|||
T Consensus 22 la~~l~~~G~~v~i~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~ 96 (254)
T PRK12746 22 IAMRLANDGALVAIHYGRNKQAA-----DETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVN 96 (254)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHH-----HHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEE
Confidence 478899999999886 4643211 11111222 2347789999999999988777 5899999
Q ss_pred cCCCC-------------------ChhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 65 TVAYP-------------------QFLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 65 ~~~~~-------------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
+++.. ++.+..++++++.+. . .++||. |+..... +..+...|..+|..++.+.
T Consensus 97 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~sS~~~~~----~~~~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 97 NAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGRVINISSAEVRL----GFTGSIAYGLSKGALNTMT 171 (254)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEECCHHhcC----CCCCCcchHhhHHHHHHHH
Confidence 99863 123556677777653 2 346664 3322111 1112235778898877654
Q ss_pred HH-------cCCCEEEEeccccch
Q 026978 123 EA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~ 139 (230)
+. .++.++.++||++..
T Consensus 172 ~~~~~~~~~~~i~v~~v~pg~~~t 195 (254)
T PRK12746 172 LPLAKHLGERGITVNTIMPGYTKT 195 (254)
T ss_pred HHHHHHHhhcCcEEEEEEECCccC
Confidence 32 579999999998754
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.8e-06 Score=70.14 Aligned_cols=129 Identities=9% Similarity=0.101 Sum_probs=84.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|+.|++++|+.... +..+.+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 96 (258)
T PRK08628 23 ISLRLAEEGAIPVIFGRSAPDD------EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDG 96 (258)
T ss_pred HHHHHHHcCCcEEEEcCChhhH------HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 4788999999999999975421 1122221 2357889999999999988876 5799999998431
Q ss_pred -----------------hhhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 -----------------FLDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++.+++.. .+ ..+|+. |+....... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~ 171 (258)
T PRK08628 97 VGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ----GGTSGYAAAKGAQLALTREWAVAL 171 (258)
T ss_pred CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC----CCCchhHHHHHHHHHHHHHHHHHH
Confidence 1233445555432 23 356764 332211111 1223577899888877653
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.++..+.|+||.+...
T Consensus 172 ~~~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 172 AKDGVRVNAVIPAEVMTP 189 (258)
T ss_pred hhcCeEEEEEecCccCCH
Confidence 4799999999988654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.5e-06 Score=69.00 Aligned_cols=130 Identities=14% Similarity=0.224 Sum_probs=81.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|+.|.++.+.... .+.+.+..++..+ +..+.+|++|.+++.++++ ++|+|||+++...
T Consensus 19 ~a~~l~~~G~~vv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 94 (246)
T PRK12938 19 ICQRLHKDGFKVVAGCGPNSP----RRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRD 94 (246)
T ss_pred HHHHHHHcCCEEEEEcCCChH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 478899999999886653221 1111222332223 5567899999988877765 6899999998631
Q ss_pred ------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ ...++.++++.+ ++++|. |+ .+.... .....|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~y~~sK~a~~~~~~~l~ 168 (246)
T PRK12938 95 VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ-----FGQTNYSTAKAGIHGFTMSLA 168 (246)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCC-----CCChhHHHHHHHHHHHHHHHH
Confidence 112 344556666777 778774 33 222111 1223567888876655432
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 169 ~~~~~~gi~v~~i~pg~~~t~ 189 (246)
T PRK12938 169 QEVATKGVTVNTVSPGYIGTD 189 (246)
T ss_pred HHhhhhCeEEEEEEecccCCc
Confidence 5899999999987643
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.2e-06 Score=70.07 Aligned_cols=132 Identities=11% Similarity=0.140 Sum_probs=82.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|+++.|+..... .+-.+.+... ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 la~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 98 (245)
T PRK12937 21 IARRLAADGFAVAVNYAGSAAAA-DELVAEIEAA-GGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT 98 (245)
T ss_pred HHHHHHHCCCEEEEecCCCHHHH-HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999988877543110 0001111111 2357889999999999988877 6899999998531
Q ss_pred ----------------hhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------c
Q 026978 71 ----------------FLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------A 125 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~ 125 (230)
+.+..++++++.+.- ...++|. |+.+.... ..+...|..+|..++.+++. .
T Consensus 99 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~ 174 (245)
T PRK12937 99 IADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP----LPGYGPYAASKAAVEGLVHVLANELRGR 174 (245)
T ss_pred hhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC----CCCCchhHHHHHHHHHHHHHHHHHhhhc
Confidence 234556677765531 0236664 33222111 11234577899888877653 4
Q ss_pred CCCEEEEeccccc
Q 026978 126 QIPYTFVSANLCG 138 (230)
Q Consensus 126 gl~~tilr~g~~~ 138 (230)
++..+.++||++.
T Consensus 175 ~i~v~~i~pg~~~ 187 (245)
T PRK12937 175 GITVNAVAPGPVA 187 (245)
T ss_pred CeEEEEEEeCCcc
Confidence 7889999998764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.2e-06 Score=70.89 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=82.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.++.|.... +.+. ...+. ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 18 ~a~~l~~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 92 (256)
T PRK12743 18 CALLLAQQGFDIGITWHSDEE-----GAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMT 92 (256)
T ss_pred HHHHHHHCCCEEEEEeCCChH-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999888765321 1111 11222 2357889999999988877665 5799999998531
Q ss_pred -------------------hhhHHHHHHHHHHh----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLEIVHAIKVA----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~a----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+...+++++... ++-.++|. |+..... +..+...|..+|..++.+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~sK~a~~~l~~~la 168 (256)
T PRK12743 93 KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT----PLPGASAYTAAKHALGGLTKAMA 168 (256)
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC----CCCCcchhHHHHHHHHHHHHHHH
Confidence 23455666665542 21146664 4332211 111234677889888776543
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++..+.|+||++..
T Consensus 169 ~~~~~~~i~v~~v~Pg~~~t 188 (256)
T PRK12743 169 LELVEHGILVNAVAPGAIAT 188 (256)
T ss_pred HHhhhhCeEEEEEEeCCccC
Confidence 579999999998764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-06 Score=69.73 Aligned_cols=130 Identities=12% Similarity=0.154 Sum_probs=83.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|+.|+++.|+.... . + +....+. ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 18 la~~l~~~g~~vi~~~r~~~~~--~-~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~ 93 (245)
T PRK12824 18 IARELLNDGYRVIATYFSGNDC--A-K-DWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRD 93 (245)
T ss_pred HHHHHHHcCCEEEEEeCCcHHH--H-H-HHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 4678999999999999984311 0 0 0111111 2348899999999998888775 4799999998531
Q ss_pred ------------------hhhHHH----HHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLE----IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..+ +++++++.+ ..+||. |+.+.... .+ ....|..+|..++.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~--~~--~~~~Y~~sK~a~~~~~~~l~~ 168 (245)
T PRK12824 94 SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKG--QF--GQTNYSAAKAGMIGFTKALAS 168 (245)
T ss_pred CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccC--CC--CChHHHHHHHHHHHHHHHHHH
Confidence 123333 456667777 778774 44332211 11 123566888776655443
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.++..+.++||++..
T Consensus 169 ~~~~~~i~v~~v~pg~~~t 187 (245)
T PRK12824 169 EGARYGITVNCIAPGYIAT 187 (245)
T ss_pred HHHHhCeEEEEEEEcccCC
Confidence 589999999998764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.1e-06 Score=68.59 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=81.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
|+++|+++|++|.+++|+... .+.+ +.+ ...+.++.+|++|.+++..+++ ++|+|||+++..
T Consensus 22 la~~l~~~g~~v~~~~r~~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 94 (249)
T PRK06500 22 TARQFLAEGARVAITGRDPAS------LEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA 94 (249)
T ss_pred HHHHHHHCCCEEEEecCCHHH------HHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 478899999999999986421 1111 122 2357789999999877655443 689999999853
Q ss_pred ----------------ChhhHHHHHHHHHH---hCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 70 ----------------QFLDQLEIVHAIKV---AGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~---ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
++.+..++++++.. .+ .+.++.++.+..... .....|..+|...+.+++.
T Consensus 95 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~i~~~S~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~ 169 (249)
T PRK06500 95 PLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP-ASIVLNGSINAHIGM----PNSSVYAASKAALLSLAKTLSGELL 169 (249)
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEechHhccCC----CCccHHHHHHHHHHHHHHHHHHHhh
Confidence 13456778888864 23 233333332211100 1224677899988877743
Q ss_pred -cCCCEEEEeccccchh
Q 026978 125 -AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -~gl~~tilr~g~~~~~ 140 (230)
.|++.+.++||.....
T Consensus 170 ~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 170 PRGIRVNAVSPGPVQTP 186 (249)
T ss_pred hcCeEEEEEeeCcCCCH
Confidence 4899999999877643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.6e-06 Score=69.50 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|.++.|.... +.+ .+...++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ~a~~l~~~G~~v~~~~~~~~~-----~~~---~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~ 94 (255)
T PRK06463 23 IAEAFLREGAKVAVLYNSAEN-----EAK---ELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP 94 (255)
T ss_pred HHHHHHHCCCEEEEEeCCcHH-----HHH---HHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 478899999999988765321 222 2333478899999999999888766 5799999997631
Q ss_pred ----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+ .+.++..+++.+ ..++|. |..+.... ......|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~----~~~~~~Y~asKaa~~~~~~~la~e 169 (255)
T PRK06463 95 FEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTA----AEGTTFYAITKAGIIILTRRLAFE 169 (255)
T ss_pred hhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCC----CCCccHhHHHHHHHHHHHHHHHHH
Confidence 122 344555566555 567764 32222110 01123567899888776653
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+..+.|+||++.
T Consensus 170 ~~~~~i~v~~i~Pg~v~ 186 (255)
T PRK06463 170 LGKYGIRVNAVAPGWVE 186 (255)
T ss_pred hhhcCeEEEEEeeCCCC
Confidence 47999999999764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.8e-06 Score=67.95 Aligned_cols=128 Identities=12% Similarity=0.145 Sum_probs=79.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|+.|++..|+.. +.+.+..-....++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 la~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 95 (245)
T PRK12936 22 IARLLHAQGAIVGLHGTRVE------KLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGL 95 (245)
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 47889999998888877632 2222211112468899999999998887653 589999999853
Q ss_pred ---------------ChhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 70 ---------------QFLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
++.+..++++++. +.+ .++||. |+.+...... ....|..+|..++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----~~~~Y~~sk~a~~~~~~~la~~~ 170 (245)
T PRK12936 96 FVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNP----GQANYCASKAGMIGFSKSLAQEI 170 (245)
T ss_pred cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCC----CCcchHHHHHHHHHHHHHHHHHh
Confidence 1234445555543 345 567774 4322111110 11245677776554443
Q ss_pred -HcCCCEEEEeccccch
Q 026978 124 -AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -~~gl~~tilr~g~~~~ 139 (230)
..++..+.++||++..
T Consensus 171 ~~~~i~v~~i~pg~~~t 187 (245)
T PRK12936 171 ATRNVTVNCVAPGFIES 187 (245)
T ss_pred hHhCeEEEEEEECcCcC
Confidence 2589999999997754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.1e-06 Score=71.71 Aligned_cols=128 Identities=14% Similarity=0.220 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.+++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||++|...
T Consensus 56 la~~La~~G~~Vi~~~R~~~------~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 56 AAEQFARRGATVVAVARRED------LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSI 129 (293)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 22111 1121 2246789999999999888887 7899999998531
Q ss_pred ---------------------hhhHH----HHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 ---------------------FLDQL----EIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 ---------------------~~~~~----~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+.. .++..+++.+ ..++|. |+.+.... ..+ ....|..+|..++.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-~~p--~~~~Y~asKaal~~l~~~ 205 (293)
T PRK05866 130 RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSE-ASP--LFSVYNASKAALSAVSRV 205 (293)
T ss_pred CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCC-CCC--CcchHHHHHHHHHHHHHH
Confidence 11222 3334455666 678774 44443211 111 123577899888766543
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+..+.++||.+-
T Consensus 206 la~e~~~~gI~v~~v~pg~v~ 226 (293)
T PRK05866 206 IETEWGDRGVHSTTLYYPLVA 226 (293)
T ss_pred HHHHhcccCcEEEEEEcCccc
Confidence 58999999998653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.5e-06 Score=69.00 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=82.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|+++.|+.... +....+.. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 24 la~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~ 97 (260)
T PRK12823 24 VALRAAAEGARVVLVDRSELVH------EVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIW 97 (260)
T ss_pred HHHHHHHCCCEEEEEeCchHHH------HHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccC
Confidence 4788999999999999974211 11112222 246788999999888777665 579999999742
Q ss_pred --C----------------h----hhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 --Q----------------F----LDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 --~----------------~----~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
. + ...+.++..+++.+ ..++|. |+...... +..+|..+|...+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~------~~~~Y~~sK~a~~~~~~~la 170 (260)
T PRK12823 98 AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGI------NRVPYSAAKGGVNALTASLA 170 (260)
T ss_pred CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCC------CCCccHHHHHHHHHHHHHHH
Confidence 0 1 12235566666776 677764 33221100 123577899888876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 171 ~e~~~~gi~v~~v~Pg~v~t 190 (260)
T PRK12823 171 FEYAEHGIRVNAVAPGGTEA 190 (260)
T ss_pred HHhcccCcEEEEEecCccCC
Confidence 489999999998764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.9e-06 Score=71.09 Aligned_cols=131 Identities=14% Similarity=0.188 Sum_probs=84.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
|++.|+++|++|.++.|+.... ++ ....+. ...+..+.+|++|.+++..+++ .+|+|||+++..
T Consensus 21 la~~l~~~G~~V~~~~r~~~~~---~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~ 95 (258)
T PRK07890 21 LAVRAARAGADVVLAARTAERL---DE--VAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPS 95 (258)
T ss_pred HHHHHHHcCCEEEEEeCCHHHH---HH--HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCC
Confidence 4788999999999999975321 01 111222 2347889999999998877664 579999999752
Q ss_pred ------------------ChhhHHHHHHHHHHhC--CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ------------------QFLDQLEIVHAIKVAG--NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag--~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+...+++++...- .-+++|. |+.+... +..+...|..+|..++.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~~sK~a~~~l~~~~a~~ 171 (258)
T PRK07890 96 MKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH----SQPKYGAYKMAKGALLAASQSLATE 171 (258)
T ss_pred CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc----CCCCcchhHHHHHHHHHHHHHHHHH
Confidence 1234566777765431 0246764 3322211 111223567889888776653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.++..+.++||.+...
T Consensus 172 ~~~~~i~v~~v~pg~v~~~ 190 (258)
T PRK07890 172 LGPQGIRVNSVAPGYIWGD 190 (258)
T ss_pred HhhcCcEEEEEeCCccCcH
Confidence 4899999999987654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.4e-06 Score=72.87 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=83.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|++++|+... .+. .+.++. ..+.++.+|++|.+++.++++ ++|++||+++...
T Consensus 24 la~~la~~G~~Vvl~~R~~~~------l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~ 97 (334)
T PRK07109 24 TARAFARRGAKVVLLARGEEG------LEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTV 97 (334)
T ss_pred HHHHHHHCCCEEEEEECCHHH------HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCC
Confidence 468899999999999997432 111 112222 346789999999999888765 6899999998531
Q ss_pred -----------------------hhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -----------------------FLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -----------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+...+.++..+++.+ ..++|. |+ .+.... + ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~---~--~~~~Y~asK~a~~~~~~~l 171 (334)
T PRK07109 98 FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI---P--LQSAYCAAKHAIRGFTDSL 171 (334)
T ss_pred CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC---C--cchHHHHHHHHHHHHHHHH
Confidence 123455667777766 567774 33 332111 1 123577888876654432
Q ss_pred --------cCCCEEEEeccccch
Q 026978 125 --------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --------~gl~~tilr~g~~~~ 139 (230)
.++.++.|+||.+..
T Consensus 172 ~~el~~~~~~I~v~~v~Pg~v~T 194 (334)
T PRK07109 172 RCELLHDGSPVSVTMVQPPAVNT 194 (334)
T ss_pred HHHHhhcCCCeEEEEEeCCCccC
Confidence 368999999988653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.1e-06 Score=68.20 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=80.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|+++.|+.... + ...+.++.+|++|.+++.+++ .++|+|||+++..
T Consensus 25 ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 92 (260)
T PRK06523 25 TVARLLEAGARVVTTARSRPDD-----------L-PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPA 92 (260)
T ss_pred HHHHHHHCCCEEEEEeCChhhh-----------c-CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCC
Confidence 4688999999999999975321 1 245789999999998776554 3679999999842
Q ss_pred -----------------ChhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 -----------------QFLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 -----------------~~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+. +.++..+++.+ ..++|. |+........ .+...|..+|..++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~---~~~~~Y~~sK~a~~~l~~~~a~ 168 (260)
T PRK06523 93 GGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP---ESTTAYAAAKAALSTYSKSLSK 168 (260)
T ss_pred CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC---CCcchhHHHHHHHHHHHHHHHH
Confidence 11222 33445556666 567764 3322111100 0234677899888766543
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 169 ~~~~~gi~v~~i~Pg~v~t 187 (260)
T PRK06523 169 EVAPKGVRVNTVSPGWIET 187 (260)
T ss_pred HHhhcCcEEEEEecCcccC
Confidence 589999999998754
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.5e-06 Score=68.05 Aligned_cols=128 Identities=12% Similarity=0.180 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
|+++|+++|+.|+++.|+.. . ++.. .+... ...+.++.+|++|.+++.++++ ++|++||+++...
T Consensus 31 ia~~l~~~G~~v~~~~~~~~-~---~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~ 105 (258)
T PRK06935 31 YAVALAKAGADIIITTHGTN-W---DETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA 105 (258)
T ss_pred HHHHHHHCCCEEEEEeCCcH-H---HHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999722 1 1111 11111 2357899999999999888776 6799999998531
Q ss_pred -----------------hhhH----HHHHHHHHHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQ----LEIVHAIKVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+. +.++..+++.+ ..++|. |+. +.... + ....|..+|...+.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~--~~~~Y~asK~a~~~~~~~la~ 179 (258)
T PRK06935 106 PLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGG---K--FVPAYTASKHGVAGLTKAFAN 179 (258)
T ss_pred CcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCC---C--CchhhHHHHHHHHHHHHHHHH
Confidence 1222 33344555555 567664 332 21111 0 123567899888776653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||++..
T Consensus 180 e~~~~gi~v~~i~PG~v~t 198 (258)
T PRK06935 180 ELAAYNIQVNAIAPGYIKT 198 (258)
T ss_pred HhhhhCeEEEEEEeccccc
Confidence 579999999998643
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.8e-06 Score=68.17 Aligned_cols=130 Identities=12% Similarity=0.191 Sum_probs=79.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|++.|+++|++|+++.|+.... ++. ...+. ..++.++.+|++|++++.++++ ++|+|||+++...
T Consensus 18 la~~l~~~G~~v~~~~r~~~~~---~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 92 (256)
T PRK08643 18 IAKRLVEDGFKVAIVDYNEETA---QAA--ADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT 92 (256)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH---HHH--HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 4788999999999999975321 111 11222 2357789999999998877766 5799999997531
Q ss_pred ------------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+++++. +.+.-.++|. |+.+..... .....|..+|...+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~ 168 (256)
T PRK08643 93 TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN----PELAVYSSTKFAVRGLTQTAAR 168 (256)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----CCCchhHHHHHHHHHHHHHHHH
Confidence 122333344443 3221235553 432211111 0123577889887765543
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||++..
T Consensus 169 e~~~~gi~v~~i~Pg~v~t 187 (256)
T PRK08643 169 DLASEGITVNAYAPGIVKT 187 (256)
T ss_pred HhcccCcEEEEEeeCCCcC
Confidence 589999999998754
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.6e-06 Score=67.93 Aligned_cols=129 Identities=13% Similarity=0.210 Sum_probs=81.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|+.|+++.|+.. ++.+. ...+. ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 16 la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 90 (242)
T TIGR01829 16 ICQRLAKDGYRVAANCGPNE-----ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITR 90 (242)
T ss_pred HHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 47889999999999998421 11111 11111 2357899999999988877654 4799999997531
Q ss_pred -------------------hhhH----HHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQ----LEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+. ..++..+++.+ ++++|. |+ .+..... ....|..+|...+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-----~~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 91 DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF-----GQTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC-----CcchhHHHHHHHHHHHHHH
Confidence 1222 33555666777 778764 33 2221111 123566788766655432
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||++...
T Consensus 165 a~~~~~~~i~v~~i~pg~~~t~ 186 (242)
T TIGR01829 165 AQEGATKGVTVNTISPGYIATD 186 (242)
T ss_pred HHHhhhhCeEEEEEeeCCCcCc
Confidence 5899999999987653
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.2e-06 Score=67.72 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=80.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.+++|+... .+.+.......+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~ 95 (261)
T PRK08265 22 VARALVAAGARVAIVDIDADN------GAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG 95 (261)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCc
Confidence 478899999999999997532 111111113458899999999998887766 469999999852
Q ss_pred --------------ChhhHHHHHHHHHH---hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 70 --------------QFLDQLEIVHAIKV---AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 70 --------------~~~~~~~ll~Aa~~---ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
++.+...+++++.. .+ -.++|. |+ .+..... ....|..+|...+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~-----~~~~Y~asKaa~~~~~~~la~e~~ 169 (261)
T PRK08265 96 LASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTSISAKFAQT-----GRWLYPASKAAIRQLTRSMAMDLA 169 (261)
T ss_pred CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCC-----CCchhHHHHHHHHHHHHHHHHHhc
Confidence 12233444444432 22 245553 33 2221111 123567889887776653
Q ss_pred -cCCCEEEEeccccch
Q 026978 125 -AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 170 ~~gi~vn~v~PG~~~t 185 (261)
T PRK08265 170 PDGIRVNSVSPGWTWS 185 (261)
T ss_pred ccCEEEEEEccCCccC
Confidence 589999999997643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.6e-06 Score=68.36 Aligned_cols=128 Identities=13% Similarity=0.169 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~ 70 (230)
++++|+++|++|+++.|.... +.+. ...+.. ..+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 22 la~~l~~~g~~v~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 22 ITVALAQEGAKVVINYNSSKE-----AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHHHHHcCCEEEEEcCCcHH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 468899999999876553211 1111 122322 2477899999999999888875 699999998631
Q ss_pred -------------------hhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++.. .+ ..++|. |+ .|.... .+...|..+|...+.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 170 (247)
T PRK12935 97 DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGG-----FGQTNYSAAKAGMLGFTKSL 170 (247)
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCC-----CCCcchHHHHHHHHHHHHHH
Confidence 2345566666653 33 356664 33 332111 1224677889877665542
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.++..+.++||.+..
T Consensus 171 ~~~~~~~~i~v~~v~pg~v~t 191 (247)
T PRK12935 171 ALELAKTNVTVNAICPGFIDT 191 (247)
T ss_pred HHHHHHcCcEEEEEEeCCCcC
Confidence 489999999998754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.7e-06 Score=67.18 Aligned_cols=120 Identities=8% Similarity=0.080 Sum_probs=80.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|+... ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~ 87 (258)
T PRK06398 22 VVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA 87 (258)
T ss_pred HHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478899999999999997431 1357889999999998887765 589999999853
Q ss_pred ---------------ChhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+...+++++. +.+ ..++|. |+..... +..+...|..+|...+.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~Y~~sKaal~~~~~~la~e~ 162 (258)
T PRK06398 88 IHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFA----VTRNAAAYVTSKHAVLGLTRSIAVDY 162 (258)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhcc----CCCCCchhhhhHHHHHHHHHHHHHHh
Confidence 1234455555543 445 567764 3322111 111234677899888877654
Q ss_pred -cCCCEEEEeccccch
Q 026978 125 -AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -~gl~~tilr~g~~~~ 139 (230)
.++....|.||+...
T Consensus 163 ~~~i~vn~i~PG~v~T 178 (258)
T PRK06398 163 APTIRCVAVCPGSIRT 178 (258)
T ss_pred CCCCEEEEEecCCccc
Confidence 237788889987643
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=4e-06 Score=69.11 Aligned_cols=130 Identities=8% Similarity=0.128 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|.+..|+.... . +....+.. ..+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 25 ia~~L~~~G~~vvl~~r~~~~~--~---~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 99 (254)
T PRK08085 25 LATGLAEYGAEIIINDITAERA--E---LAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRR 99 (254)
T ss_pred HHHHHHHcCCEEEEEcCCHHHH--H---HHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 4788999999999999874321 0 11112322 346778999999998887764 4799999998531
Q ss_pred ------------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+++++. +.+ ..++|. |+....... .+...|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~ 174 (254)
T PRK08085 100 HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGR----DTITPYAASKGAVKMLTRGMCV 174 (254)
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCC----CCCcchHHHHHHHHHHHHHHHH
Confidence 123344455443 344 567774 433211111 1223577889887776654
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||++...
T Consensus 175 e~~~~gi~v~~v~pG~~~t~ 194 (254)
T PRK08085 175 ELARHNIQVNGIAPGYFKTE 194 (254)
T ss_pred HHHhhCeEEEEEEeCCCCCc
Confidence 5899999999987643
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.7e-06 Score=69.02 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~------- 69 (230)
|+++|+++|++|++++|+.... ...+++.+|++|.+++.++++ ++|+|||+++..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~--------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~ 66 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM--------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVEL 66 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh--------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHH
Confidence 6889999999999999974321 113578899999999998887 589999999863
Q ss_pred ----ChhhHHHHHHHHHHh--CCcceEec--cc--ccccCCC--------------------CCCCCchhHHHHHHHHHH
Q 026978 70 ----QFLDQLEIVHAIKVA--GNIKRFLP--SE--FGCEEDK--------------------VRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~a--g~Vkr~v~--S~--~g~~~~~--------------------~~~~~p~~~~~~~K~~~e 119 (230)
|+.+...+++++... . -.++|. |. ++..... ..+..+...|..+|..++
T Consensus 67 ~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~ 145 (241)
T PRK12428 67 VARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALI 145 (241)
T ss_pred hhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHH
Confidence 345667777777653 2 246663 32 3211000 011222346778998876
Q ss_pred HHHH--------HcCCCEEEEeccccch
Q 026978 120 RAIE--------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~--------~~gl~~tilr~g~~~~ 139 (230)
.+.+ ..|+..+.|+||+...
T Consensus 146 ~~~~~la~~e~~~~girvn~v~PG~v~T 173 (241)
T PRK12428 146 LWTMRQAQPWFGARGIRVNCVAPGPVFT 173 (241)
T ss_pred HHHHHHHHHhhhccCeEEEEeecCCccC
Confidence 5432 2589999999997753
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.4e-06 Score=68.89 Aligned_cols=129 Identities=10% Similarity=0.151 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|++|.++.|+..... + ....+.. ..+.++.+|++|.+++.++++ ..|+|||+++...
T Consensus 26 ia~~l~~~G~~vv~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 100 (265)
T PRK07097 26 IAKAYAKAGATIVFNDINQELVD---K--GLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR 100 (265)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHH---H--HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCC
Confidence 47889999999999988743210 1 1112222 247789999999999888775 3799999998631
Q ss_pred ------------------hhhHH----HHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQL----EIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~----~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+.. .++..+++.+ ..++|. |+....... .+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~ 175 (265)
T PRK07097 101 IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGR----ETVSAYAAAKGGLKMLTKNIAS 175 (265)
T ss_pred CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCC----CCCccHHHHHHHHHHHHHHHHH
Confidence 12223 3444455555 567764 332211111 1223577889887766653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||++..
T Consensus 176 e~~~~gi~v~~v~Pg~v~t 194 (265)
T PRK07097 176 EYGEANIQCNGIGPGYIAT 194 (265)
T ss_pred HhhhcCceEEEEEeccccc
Confidence 589999999998764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.7e-06 Score=68.86 Aligned_cols=131 Identities=14% Similarity=0.164 Sum_probs=83.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~---- 70 (230)
++++|+++|++|.++.|+..... +-.+.+.......+.++.+|++|.+++.++++ ++|++||+++...
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~ 101 (263)
T PRK08339 24 VARVLARAGADVILLSRNEENLK--KAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYF 101 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCc
Confidence 47889999999999999743210 00011111112357899999999998888776 5799999998531
Q ss_pred -------------------hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCch-hHHHHHHHHHHHHHHH-----
Q 026978 71 -------------------FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~----- 124 (230)
+...+.++..+++.+ ..++|. |+..... .. |. ..|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~--~~---~~~~~y~asKaal~~l~~~la~el 175 (263)
T PRK08339 102 MEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKE--PI---PNIALSNVVRISMAGLVRTLAKEL 175 (263)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccC--CC---CcchhhHHHHHHHHHHHHHHHHHh
Confidence 112455666676766 577764 3322111 11 22 2455788887765543
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 176 ~~~gIrVn~v~PG~v~T 192 (263)
T PRK08339 176 GPKGITVNGIMPGIIRT 192 (263)
T ss_pred cccCeEEEEEEeCcCcc
Confidence 589999999998743
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.8e-06 Score=67.27 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=82.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-----------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-----------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-----------g~D~Vi~~~~~~ 69 (230)
+++.|+++|++|++++|+.... +.......+.++.+|+.|.+++.++++ ..|++||+++..
T Consensus 17 ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~ 88 (243)
T PRK07023 17 LAEQLLQPGIAVLGVARSRHPS--------LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTV 88 (243)
T ss_pred HHHHHHhCCCEEEEEecCcchh--------hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCccc
Confidence 4788999999999999975421 001112357889999999998887442 368999998753
Q ss_pred C--------------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q--------------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~--------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+ ...+++.+++.+ .+++|. |+.+... +..+...|..+|..++.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~ 163 (243)
T PRK07023 89 EPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARN----AYAGWSVYCATKAALDHHARA 163 (243)
T ss_pred CCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcC----CCCCchHHHHHHHHHHHHHHH
Confidence 1 123 334455555555 567774 4432211 111234677899998888763
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.++.+..|+||++..
T Consensus 164 ~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 164 VALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred HHhcCCCCcEEEEecCCcccc
Confidence 478899999987643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.6e-06 Score=68.61 Aligned_cols=129 Identities=14% Similarity=0.086 Sum_probs=80.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC--CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI--GVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|++..|+.... .+....+... .+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 22 la~~La~~G~~Vv~~~r~~~~l-----~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~ 96 (275)
T PRK05876 22 TGTEFARRGARVVLGDVDKPGL-----RQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVG 96 (275)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 4788999999999999874321 0112233222 36778999999999888766 369999999853
Q ss_pred -----------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 70 -----------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
++.+..++++++. +.+...++|. |+ .|... ..+...|..+|..++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l~ 171 (275)
T PRK05876 97 GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----NAGLGAYGVAKYGVVGLAETLA 171 (275)
T ss_pred CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----CCCCchHHHHHHHHHHHHHHHH
Confidence 1234556666653 4431246663 33 22211 1123457788876443322
Q ss_pred ----HcCCCEEEEeccccch
Q 026978 124 ----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ----~~gl~~tilr~g~~~~ 139 (230)
..|+..++++||.+..
T Consensus 172 ~e~~~~gi~v~~v~Pg~v~t 191 (275)
T PRK05876 172 REVTADGIGVSVLCPMVVET 191 (275)
T ss_pred HHhhhcCcEEEEEEeCcccc
Confidence 2589999999988754
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.4e-06 Score=67.46 Aligned_cols=122 Identities=14% Similarity=0.236 Sum_probs=80.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~---- 69 (230)
+++.|+++|++|++++|+.... ....+++++.+|+.|.+++.++++. +|+|||+++..
T Consensus 22 la~~l~~~g~~v~~~~r~~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 90 (252)
T PRK07856 22 IARAFLAAGATVVVCGRRAPET-----------VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYAL 90 (252)
T ss_pred HHHHHHHCCCEEEEEeCChhhh-----------hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 4788999999999999974310 1134688999999999998887764 49999999853
Q ss_pred ---------------ChhhHHHHHHHHHH----h-CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------------QFLDQLEIVHAIKV----A-GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~----a-g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+...+++++.. . + ..++|. |+...... ......|..+|..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~e 165 (252)
T PRK07856 91 AAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-GGSIVNIGSVSGRRP----SPGTAAYGAAKAGLLNLTRSLAVE 165 (252)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcccccCCC----CCCCchhHHHHHHHHHHHHHHHHH
Confidence 12345566666543 2 3 356664 43322111 11123577899998887764
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
..+....|+||+..
T Consensus 166 ~~~~i~v~~i~Pg~v~ 181 (252)
T PRK07856 166 WAPKVRVNAVVVGLVR 181 (252)
T ss_pred hcCCeEEEEEEecccc
Confidence 12677777888764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-05 Score=66.39 Aligned_cols=128 Identities=9% Similarity=0.109 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+++|+..... +..+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ~a~~l~~~G~~vv~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 23 IARAFAREGAAVALADLDAALAE-----RAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 47889999999999999743211 1111221 2347789999999998888776 689999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+...+++++ ++.+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sKaa~~~~~~~ 171 (260)
T PRK07063 98 VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKII-----PGCFPYPVAKHGLLGLTRA 171 (260)
T ss_pred CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCC-----CCchHHHHHHHHHHHHHHH
Confidence 122334444443 4455 467764 33 222111 1223677899988877654
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 172 la~el~~~gIrvn~v~PG~v~t 193 (260)
T PRK07063 172 LGIEYAARNVRVNAIAPGYIET 193 (260)
T ss_pred HHHHhCccCeEEEEEeeCCccC
Confidence 478899999987643
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.1e-06 Score=68.01 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+++|+... .+.+ ..+.. ..+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 95 (254)
T PRK07478 22 AAKLFAREGAKVVVGARRQAE------LDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLG 95 (254)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 478899999999999997532 1111 12222 347789999999998887776 6799999998521
Q ss_pred --------------------hh----hHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FL----DQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+. ..+.++..+++.+ -.++|. |+ .|.... ......|..+|...+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~ 170 (254)
T PRK07478 96 EMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG----FPGMAAYAASKAGLIGLTQV 170 (254)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC----CCCcchhHHHHHHHHHHHHH
Confidence 11 2233455566665 567764 33 332111 11223577899888766543
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+..+.|.||+..
T Consensus 171 la~e~~~~gi~v~~v~PG~v~ 191 (254)
T PRK07478 171 LAAEYGAQGIRVNALLPGGTD 191 (254)
T ss_pred HHHHHhhcCEEEEEEeeCccc
Confidence 47889999998874
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=9.5e-06 Score=66.95 Aligned_cols=131 Identities=8% Similarity=0.079 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~- 70 (230)
++++|+++|++|.++.|+..... ++ ..+.+.. ..+..+.+|++|.+++.++++. .|+|||+++...
T Consensus 24 ia~~l~~~G~~v~~~~r~~~~~~--~~--~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~ 99 (254)
T PRK06114 24 IAIGLAQAGADVALFDLRTDDGL--AE--TAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANA 99 (254)
T ss_pred HHHHHHHCCCEEEEEeCCcchHH--HH--HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999999753210 01 1122322 3477899999999988877663 699999998631
Q ss_pred ------------------hhhHHH----HHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLE----IVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+... ++.++++.+ ..++|. |+ .|...... .+...|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~---~~~~~Y~~sKaa~~~l~~~la 175 (254)
T PRK06114 100 NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG---LLQAHYNASKAGVIHLSKSLA 175 (254)
T ss_pred CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC---CCcchHHHHHHHHHHHHHHHH
Confidence 123333 344455555 467663 33 23211110 0123577889877765543
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 176 ~e~~~~gi~v~~v~PG~i~t 195 (254)
T PRK06114 176 MEWVGRGIRVNSISPGYTAT 195 (254)
T ss_pred HHHhhcCeEEEEEeecCccC
Confidence 589999999997643
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.36 E-value=1e-05 Score=66.74 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=81.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|.++.|+... .+.+ +.+ ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 26 ~a~~l~~~g~~v~~~~~~~~~------~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~ 98 (255)
T PRK05717 26 IAAWLIAEGWQVVLADLDRER------GSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPH 98 (255)
T ss_pred HHHHHHHcCCEEEEEcCCHHH------HHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCC
Confidence 478899999999999886431 1111 122 2457889999999888766544 479999999853
Q ss_pred ------------------ChhhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++.. .. ..++|. |+....... + ....|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~--~--~~~~Y~~sKaa~~~~~~~la~ 173 (255)
T PRK05717 99 NTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSE--P--DTEAYAASKGGLLALTHALAI 173 (255)
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCC--C--CCcchHHHHHHHHHHHHHHHH
Confidence 12356778888753 22 245553 432211111 0 123577899888877654
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.++..+.|+||++..
T Consensus 174 ~~~~~i~v~~i~Pg~i~t 191 (255)
T PRK05717 174 SLGPEIRVNAVSPGWIDA 191 (255)
T ss_pred HhcCCCEEEEEecccCcC
Confidence 257888889987754
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.2e-06 Score=68.33 Aligned_cols=131 Identities=11% Similarity=0.134 Sum_probs=80.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|.++.|+.... +...+.++.. ...++++.+|++|.+++..+++ .+|+|||+++...
T Consensus 23 ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~ 99 (253)
T PRK06172 23 TALAFAREGAKVVVADRDAAGG--EETVALIREA-GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQG 99 (253)
T ss_pred HHHHHHHcCCEEEEEeCCHHHH--HHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 4788999999999999975421 1111111111 2357889999999998888766 4599999998520
Q ss_pred -----------------hhhHHHH----HHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLDQLEI----VHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------------~~~~~~l----l~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+...+ +..+++.+ ..++|. |+.+.... ......|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~~la~e 174 (253)
T PRK06172 100 RLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGA----APKMSIYAASKHAVIGLTKSAAIE 174 (253)
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccC----CCCCchhHHHHHHHHHHHHHHHHH
Confidence 1122223 33344455 456664 33221111 11223567899888776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++..
T Consensus 175 ~~~~~i~v~~i~PG~v~t 192 (253)
T PRK06172 175 YAKKGIRVNAVCPAVIDT 192 (253)
T ss_pred hcccCeEEEEEEeCCccC
Confidence 478888999997743
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=66.26 Aligned_cols=127 Identities=15% Similarity=0.256 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhcC--------CCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILKE--------VDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~g--------~D~Vi~~~~~~-- 69 (230)
+++.|+++|++|.++.|... ++.+.+. .+ ..++.++.+|++|.+++.++++. +|+|||+++..
T Consensus 21 la~~l~~~G~~vv~~~~~~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~ 94 (253)
T PRK08642 21 IARAFAREGARVVVNYHQSE-----DAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFS 94 (253)
T ss_pred HHHHHHHCCCeEEEEcCCCH-----HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcccc
Confidence 46789999999988766432 1222221 12 24688899999999998887763 89999998631
Q ss_pred -----------------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 70 -----------------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 70 -----------------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
++.+..++++++. +.+ ..++|. |+ .+.. +..|...|..+|..++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~~~Y~~sK~a~~~ 168 (253)
T PRK08642 95 FDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN-----PVVPYHDYTTAKAALLG 168 (253)
T ss_pred ccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC-----CCCCccchHHHHHHHHH
Confidence 1234566666664 344 567664 32 2211 11233467899999988
Q ss_pred HHHH-------cCCCEEEEeccccch
Q 026978 121 AIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~ 139 (230)
+++. .|+....|+||++..
T Consensus 169 l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 169 LTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred HHHHHHHHhCccCeEEEEEeecccCC
Confidence 7764 468888889987743
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-05 Score=66.88 Aligned_cols=131 Identities=15% Similarity=0.159 Sum_probs=81.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|.+++|+..... ++.+. .+.++ ...++++.+|++|.+++.++++ .+|+|||+++..
T Consensus 24 ~a~~l~~~G~~vv~i~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 101 (257)
T PRK12744 24 IARDLAAQGAKAVAIHYNSAASK--ADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL 101 (257)
T ss_pred HHHHHHHCCCcEEEEecCCccch--HHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccC
Confidence 47889999999888877543221 11111 11222 2357789999999999887765 579999999862
Q ss_pred ------------------ChhhHHHHHHHHHHhC-CcceE--eccc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKVAG-NIKRF--LPSE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag-~Vkr~--v~S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+...+++++...- .-.++ +.|+ .+.... ....|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~------~~~~Y~~sK~a~~~~~~~la~ 175 (257)
T PRK12744 102 KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP------FYSAYAGSKAPVEHFTRAASK 175 (257)
T ss_pred CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC------CcccchhhHHHHHHHHHHHHH
Confidence 1224455666665420 01233 2232 232211 123577899988877664
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.++||++..
T Consensus 176 e~~~~~i~v~~v~pg~v~t 194 (257)
T PRK12744 176 EFGARGISVTAVGPGPMDT 194 (257)
T ss_pred HhCcCceEEEEEecCcccc
Confidence 379999999999864
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.9e-06 Score=66.19 Aligned_cols=129 Identities=16% Similarity=0.140 Sum_probs=79.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|++++|+.. +.+.+ +.+. ..+++++.+|++|.+++.++++ ++|.+||+++...
T Consensus 21 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~ 94 (238)
T PRK05786 21 VAYFALKEGAQVCINSRNEN------KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE 94 (238)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCC
Confidence 46789999999999999743 22222 1221 1357899999999998877654 4699999997531
Q ss_pred ----------------hhhHHHHHHHHHHh---CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH-------
Q 026978 71 ----------------FLDQLEIVHAIKVA---GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE------- 123 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~a---g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------- 123 (230)
+.+...+++++... + .++|. |+.+.... +..+...|..+|...+..++
T Consensus 95 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~---~~~~~~~Y~~sK~~~~~~~~~~~~~~~ 169 (238)
T PRK05786 95 DTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSMSGIYK---ASPDQLSYAVAKAGLAKAVEILASELL 169 (238)
T ss_pred CchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecchhccc---CCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 12233334443331 2 34553 43322111 11123457788877765443
Q ss_pred HcCCCEEEEeccccchh
Q 026978 124 AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ~~gl~~tilr~g~~~~~ 140 (230)
..++++++++||++++.
T Consensus 170 ~~gi~v~~i~pg~v~~~ 186 (238)
T PRK05786 170 GRGIRVNGIAPTTISGD 186 (238)
T ss_pred hcCeEEEEEecCccCCC
Confidence 25899999999988754
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=9e-06 Score=69.10 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|+++.|+..... +-.+.+... ....++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 32 ~a~~l~~~G~~vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~ 109 (306)
T PRK06197 32 TAAALAAKGAHVVLAVRNLDKGK--AAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP 109 (306)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC
Confidence 47889999999999999743210 001111111 12357889999999998887765 579999999852
Q ss_pred --------------Chhh----HHHHHHHHHHhCCcceEec-ccccc----c--CCC---CCCCCchhHHHHHHHHHHHH
Q 026978 70 --------------QFLD----QLEIVHAIKVAGNIKRFLP-SEFGC----E--EDK---VRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 70 --------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~----~--~~~---~~~~~p~~~~~~~K~~~e~~ 121 (230)
++.+ ...+++.+++.+ .+|+|. |+.+. . .+. ..+..+...|..+|...+.+
T Consensus 110 ~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 188 (306)
T PRK06197 110 KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLF 188 (306)
T ss_pred CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHH
Confidence 1122 566777887776 678774 43221 1 110 01122445677999887766
Q ss_pred HHH-------cCCCEEEE--eccccc
Q 026978 122 IEA-------AQIPYTFV--SANLCG 138 (230)
Q Consensus 122 l~~-------~gl~~til--r~g~~~ 138 (230)
.+. .+++.+.+ .||+..
T Consensus 189 ~~~la~~l~~~~i~v~~v~~~PG~v~ 214 (306)
T PRK06197 189 TYELQRRLAAAGATTIAVAAHPGVSN 214 (306)
T ss_pred HHHHHHHhhcCCCCeEEEEeCCCccc
Confidence 543 46665544 587654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.5e-05 Score=65.88 Aligned_cols=134 Identities=13% Similarity=0.182 Sum_probs=83.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC------CcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEc
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS------RPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~------~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~ 65 (230)
+++.|+++|++|.++.|+..... .++.......+. ...++++.+|++|.+++.++++ .+|+|||+
T Consensus 23 la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ 102 (256)
T PRK12748 23 VCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINN 102 (256)
T ss_pred HHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 47889999999999998732110 011111111121 2348899999999988777665 46999999
Q ss_pred CCCC-------------------ChhhHHHHHHHHHHh----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 66 VAYP-------------------QFLDQLEIVHAIKVA----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 66 ~~~~-------------------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
++.. ++.+...+++++... + .+++|. |+.... .+......|..+|..++.+
T Consensus 103 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~----~~~~~~~~Y~~sK~a~~~~ 177 (256)
T PRK12748 103 AAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSL----GPMPDELAYAATKGAIEAF 177 (256)
T ss_pred CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCcccc----CCCCCchHHHHHHHHHHHH
Confidence 9753 123456666666432 3 356764 322111 0111224677899998887
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
++. .++..+.|+||++..
T Consensus 178 ~~~la~e~~~~~i~v~~i~Pg~~~t 202 (256)
T PRK12748 178 TKSLAPELAEKGITVNAVNPGPTDT 202 (256)
T ss_pred HHHHHHHHHHhCeEEEEEEeCcccC
Confidence 653 489999999998754
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=61.88 Aligned_cols=131 Identities=12% Similarity=0.151 Sum_probs=83.9
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC-
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~- 69 (230)
++++|+++|+ .|.++.|+..... .....+..++ ...+.++.+|+++.+++.++++. +|.|||+++..
T Consensus 16 ~~~~l~~~g~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 93 (180)
T smart00822 16 LARWLAERGARHLVLLSRSGPDAP--GAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLD 93 (180)
T ss_pred HHHHHHHhhCCeEEEEeCCCCCCc--cHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCC
Confidence 4678888886 6888888754321 1110012222 23466789999998888777553 59999999742
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH---HcCC
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---AAQI 127 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---~~gl 127 (230)
++.+..++++++++.+ .++++. |+.+...... ....|..+|...+.+++ ..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~----~~~~y~~sk~~~~~~~~~~~~~~~ 168 (180)
T smart00822 94 DGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNP----GQANYAAANAFLDALAAHRRARGL 168 (180)
T ss_pred ccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCC----CchhhHHHHHHHHHHHHHHHhcCC
Confidence 1346788889998877 777764 4332211111 12356678888777654 3689
Q ss_pred CEEEEeccccc
Q 026978 128 PYTFVSANLCG 138 (230)
Q Consensus 128 ~~tilr~g~~~ 138 (230)
+.+.+.||++.
T Consensus 169 ~~~~~~~g~~~ 179 (180)
T smart00822 169 PATSINWGAWA 179 (180)
T ss_pred ceEEEeecccc
Confidence 99999988764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.4e-06 Score=68.05 Aligned_cols=148 Identities=17% Similarity=0.183 Sum_probs=85.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-EVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~---------- 69 (230)
|+..|.+.||+|++++|+..... . .+ ..+++ ..+.+..+.. ++|+||+++|..
T Consensus 14 L~~~L~~~gh~v~iltR~~~~~~------~--~~-~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~ 77 (297)
T COG1090 14 LTARLRKGGHQVTILTRRPPKAS------Q--NL-HPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRWTEKQ 77 (297)
T ss_pred HHHHHHhCCCeEEEEEcCCcchh------h--hc-Ccccc-------ccchhhhcccCCCCEEEECCCCccccccCCHHH
Confidence 46788899999999999875432 0 11 22222 2233455555 899999999964
Q ss_pred -------ChhhHHHHHHHHHH--hCCcceEec-cc---ccccCC----CCCCCCchhHHH-HHHHHHHHHH---HHcCCC
Q 026978 70 -------QFLDQLEIVHAIKV--AGNIKRFLP-SE---FGCEED----KVRPLPPFEAYL-EKKRIVRRAI---EAAQIP 128 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~--ag~Vkr~v~-S~---~g~~~~----~~~~~~p~~~~~-~~K~~~e~~l---~~~gl~ 128 (230)
.++.+..|+++..+ .. .+.||. |. ||...+ +..+ +...+. +-=..-|+.. +..|..
T Consensus 78 K~~i~~SRi~~T~~L~e~I~~~~~~-P~~~isaSAvGyYG~~~~~~~tE~~~--~g~~Fla~lc~~WE~~a~~a~~~gtR 154 (297)
T COG1090 78 KEEIRQSRINTTEKLVELIAASETK-PKVLISASAVGYYGHSGDRVVTEESP--PGDDFLAQLCQDWEEEALQAQQLGTR 154 (297)
T ss_pred HHHHHHHHhHHHHHHHHHHHhccCC-CcEEEecceEEEecCCCceeeecCCC--CCCChHHHHHHHHHHHHhhhhhcCce
Confidence 14578888888774 44 667885 43 665432 2211 222222 2222334333 236889
Q ss_pred EEEEeccccchhh---cccccCCCC--CCCcEEEecCCCcccCCCCC
Q 026978 129 YTFVSANLCGAYF---VNVLLRPFE--SHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 129 ~tilr~g~~~~~~---~~~~~~~~~--~~~~~~i~g~G~~~~~~~~~ 170 (230)
.+++|.|.+...- ++.++.+-+ .|+ -+|+|++.+..++.
T Consensus 155 vvllRtGvVLs~~GGaL~~m~~~fk~glGG---~~GsGrQ~~SWIhi 198 (297)
T COG1090 155 VVLLRTGVVLSPDGGALGKMLPLFKLGLGG---KLGSGRQWFSWIHI 198 (297)
T ss_pred EEEEEEEEEecCCCcchhhhcchhhhccCC---ccCCCCceeeeeeH
Confidence 9999998887521 222211100 012 37999998855554
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-05 Score=65.71 Aligned_cols=129 Identities=11% Similarity=0.166 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcC----CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQG----IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~----~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
+++.|+++|++|+++.|+... +.+.+. .+.. .-+..+.+|++|.+++.++++ ++|+|||+++.
T Consensus 15 ~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 89 (251)
T PRK07069 15 IARRMAEQGAKVFLTDINDAA-----GLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGV 89 (251)
T ss_pred HHHHHHHCCCEEEEEeCCcch-----HHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCc
Confidence 468899999999999997321 111111 1211 123457899999998877664 57999999985
Q ss_pred CC-------------------h----hhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------F----LDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 69 ~~-------------------~----~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
.. + ....+++.++++.+ .++||. |+....... + ....|..+|...+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~--~--~~~~Y~~sK~a~~~~~~~ 164 (251)
T PRK07069 90 GSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAE--P--DYTAYNASKAAVASLTKS 164 (251)
T ss_pred CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCC--C--CCchhHHHHHHHHHHHHH
Confidence 31 1 14567788888877 788874 332211110 0 123567888887766653
Q ss_pred -------c--CCCEEEEeccccch
Q 026978 125 -------A--QIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~--gl~~tilr~g~~~~ 139 (230)
. ++..+.++||++..
T Consensus 165 la~e~~~~~~~i~v~~v~pg~v~t 188 (251)
T PRK07069 165 IALDCARRGLDVRCNSIHPTFIRT 188 (251)
T ss_pred HHHHhcccCCcEEEEEEeecccCC
Confidence 2 47788889987654
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=9.2e-06 Score=65.67 Aligned_cols=126 Identities=13% Similarity=0.187 Sum_probs=80.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh---c--CCCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL---K--EVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al---~--g~D~Vi~~~~~~------ 69 (230)
++++|+++|++|++++|+... .+ .+...+++++.+|++|.+++.+++ . .+|+|||+++..
T Consensus 17 la~~L~~~G~~v~~~~r~~~~------~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~ 87 (222)
T PRK06953 17 FVRQYRADGWRVIATARDAAA------LA---ALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEG 87 (222)
T ss_pred HHHHHHhCCCEEEEEECCHHH------HH---HHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCC
Confidence 467899999999999997432 22 233457889999999999888764 3 479999998763
Q ss_pred ---------------ChhhHHHHHHHHHH---hCCcceEe--cccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAIKV---AGNIKRFL--PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~---ag~Vkr~v--~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++.. .+ -.+++ .|..+...... ..+...|..+|...+.+++.
T Consensus 88 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~ 164 (222)
T PRK06953 88 VEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDAT--GTTGWLYRASKAALNDALRAASLQA 164 (222)
T ss_pred cccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCccccccccc--CCCccccHHhHHHHHHHHHHHhhhc
Confidence 12356677777654 11 12343 23333211111 11223577899998887765
Q ss_pred cCCCEEEEeccccc
Q 026978 125 AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ~gl~~tilr~g~~~ 138 (230)
.++..+.++||++.
T Consensus 165 ~~i~v~~v~Pg~i~ 178 (222)
T PRK06953 165 RHATCIALHPGWVR 178 (222)
T ss_pred cCcEEEEECCCeee
Confidence 35677888888764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-05 Score=65.86 Aligned_cols=128 Identities=12% Similarity=0.160 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|++|+++.|+... .+....+. ...+.++.+|++|.+++.++++ ..|+|||+++..
T Consensus 22 la~~l~~~G~~Vv~~~r~~~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~ 95 (263)
T PRK08226 22 IARVFARHGANLILLDISPEI------EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRL 95 (263)
T ss_pred HHHHHHHCCCEEEEecCCHHH------HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 478899999999999997421 11111222 2346789999999999888766 569999999853
Q ss_pred -----------------ChhhHHHHHHHHH----HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAIK----VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~----~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++. +.+ ..++|. |..+..... .....|..+|...+.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la 170 (263)
T PRK08226 96 GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVAD----PGETAYALTKAAIVGLTKSLA 170 (263)
T ss_pred CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCC----CCcchHHHHHHHHHHHHHHHH
Confidence 1234555666654 344 467764 323211100 1123567889888776653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++..+.|+||+...
T Consensus 171 ~~~~~~~i~v~~i~pg~v~t 190 (263)
T PRK08226 171 VEYAQSGIRVNAICPGYVRT 190 (263)
T ss_pred HHhcccCcEEEEEecCcccC
Confidence 478999999997654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-05 Score=65.79 Aligned_cols=128 Identities=11% Similarity=0.136 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
+++.|+++|++|++++|+.... ++ ....+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ~a~~l~~~G~~v~~~~r~~~~~---~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~ 99 (257)
T PRK09242 25 IAREFLGLGADVLIVARDADAL---AQ--ARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGN 99 (257)
T ss_pred HHHHHHHcCCEEEEEeCCHHHH---HH--HHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 4678999999999999975321 01 111221 2347788999999887766554 579999999862
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ .+++|. |+ .+.... .+...|..+|...+.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 173 (257)
T PRK09242 100 IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHV-----RSGAPYGMTKAALLQMTRN 173 (257)
T ss_pred CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCC-----CCCcchHHHHHHHHHHHHH
Confidence 123455566665 3455 567764 33 222111 1223567888887776653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.++..+.++||+...
T Consensus 174 la~e~~~~~i~v~~i~Pg~i~t 195 (257)
T PRK09242 174 LAVEWAEDGIRVNAVAPWYIRT 195 (257)
T ss_pred HHHHHHHhCeEEEEEEECCCCC
Confidence 589999999998753
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=6e-06 Score=67.44 Aligned_cols=131 Identities=8% Similarity=0.106 Sum_probs=77.4
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++ .|+.. +.+ ....+. ...+.++.+|++|.+++.++++. +|+|||+++..
T Consensus 17 l~~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 17 TALLLAQEGYTVAVNYQQNLH------AAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGIL 90 (247)
T ss_pred HHHHHHHCCCEEEEEeCCChH------HHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 478899999999875 45422 111 111222 23478899999999999887774 58999999853
Q ss_pred C--------------------hhhHHHHHHHHHHh------CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 70 Q--------------------FLDQLEIVHAIKVA------GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 70 ~--------------------~~~~~~ll~Aa~~a------g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
. +.+...+++++... +.-++||. |+.+..... +. ....|..+|..++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--~~-~~~~Y~~sK~~~~~~~ 167 (247)
T PRK09730 91 FTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--PG-EYVDYAASKGAIDTLT 167 (247)
T ss_pred CCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--CC-cccchHhHHHHHHHHH
Confidence 1 11223333333222 10134664 433221111 10 1125678888877665
Q ss_pred HH-------cCCCEEEEeccccchh
Q 026978 123 EA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~~ 140 (230)
+. .+++++.++||+++..
T Consensus 168 ~~l~~~~~~~~i~v~~i~pg~~~~~ 192 (247)
T PRK09730 168 TGLSLEVAAQGIRVNCVRPGFIYTE 192 (247)
T ss_pred HHHHHHHHHhCeEEEEEEeCCCcCc
Confidence 42 5899999999998654
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.9e-06 Score=66.77 Aligned_cols=129 Identities=12% Similarity=0.212 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|+.|+++.|+..... +....++ ...+.++.+|++|.+++.++++ ..|+|||+++...
T Consensus 27 la~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 101 (256)
T PRK06124 27 IARALAGAGAHVLVNGRNAATLE-----AAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR 101 (256)
T ss_pred HHHHHHHcCCeEEEEeCCHHHHH-----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 46789999999999999743210 0111222 2347899999999998887776 3599999998631
Q ss_pred ------------------hhhHHHHH----HHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIV----HAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~ll----~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..+++ +.+++.+ .+++|. |+ .+.... + ....|..+|...+.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~---~--~~~~Y~~sK~a~~~~~~~la 175 (256)
T PRK06124 102 RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR---A--GDAVYPAAKQGLTGLMRALA 175 (256)
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC---C--CccHhHHHHHHHHHHHHHHH
Confidence 12233444 4444566 677774 33 222111 1 123566888887766543
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.++..+.|+||.+...
T Consensus 176 ~e~~~~~i~v~~i~pg~v~t~ 196 (256)
T PRK06124 176 AEFGPHGITSNAIAPGYFATE 196 (256)
T ss_pred HHHHHhCcEEEEEEECCccCc
Confidence 4899999999987653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-05 Score=65.83 Aligned_cols=128 Identities=10% Similarity=0.075 Sum_probs=79.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
|+++|+++|++|+++.|+..... + ....+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 la~~l~~~g~~vi~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~ 92 (259)
T PRK12384 18 LCHGLAEEGYRVAVADINSEKAA---N--VAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIA 92 (259)
T ss_pred HHHHHHHCCCEEEEEECCHHHHH---H--HHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 47889999999999998753211 1 111121 1348899999999988877665 579999999753
Q ss_pred -------------------ChhhHHHHHHHHH----HhCCc-ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIK----VAGNI-KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~----~ag~V-kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+..++++++. +.+ . .++|. |+ -+..... ....|..+|...+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~~ss~~~~~~~~-----~~~~Y~~sKaa~~~l~~ 166 (259)
T PRK12384 93 KAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG-IQGRIIQINSKSGKVGSK-----HNSGYSAAKFGGVGLTQ 166 (259)
T ss_pred CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-CCcEEEEecCcccccCCC-----CCchhHHHHHHHHHHHH
Confidence 1233444444443 344 3 35663 32 2211110 12357788988665543
Q ss_pred -------HcCCCEEEEeccccch
Q 026978 124 -------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -------~~gl~~tilr~g~~~~ 139 (230)
..|+....++||.+++
T Consensus 167 ~la~e~~~~gi~v~~v~pg~~~~ 189 (259)
T PRK12384 167 SLALDLAEYGITVHSLMLGNLLK 189 (259)
T ss_pred HHHHHHHHcCcEEEEEecCCccc
Confidence 3689999999997643
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-05 Score=67.22 Aligned_cols=130 Identities=8% Similarity=0.125 Sum_probs=82.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
|+++|+++|++|+++.|+..... . +. ...++. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 62 la~~l~~~G~~V~l~~r~~~~~~-~-~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~ 137 (290)
T PRK06701 62 VAVLFAKEGADIAIVYLDEHEDA-N-ET--KQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYP 137 (290)
T ss_pred HHHHHHHCCCEEEEEeCCcchHH-H-HH--HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCC
Confidence 47889999999999998753211 1 11 112222 347789999999998887765 579999999852
Q ss_pred ------------------ChhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ------------------QFLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++... . -.++|. |+.+..... + ....|..+|..++.+.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g~iV~isS~~~~~~~--~--~~~~Y~~sK~a~~~l~~~la~~ 212 (290)
T PRK06701 138 QQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GSAIINTGSITGYEGN--E--TLIDYSATKGAIHAFTRSLAQS 212 (290)
T ss_pred CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CCeEEEEecccccCCC--C--CcchhHHHHHHHHHHHHHHHHH
Confidence 123566777777652 2 246664 332211111 0 113567888887776553
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 213 ~~~~gIrv~~i~pG~v~T 230 (290)
T PRK06701 213 LVQKGIRVNAVAPGPIWT 230 (290)
T ss_pred hhhcCeEEEEEecCCCCC
Confidence 489999999987654
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-05 Score=65.18 Aligned_cols=130 Identities=11% Similarity=0.093 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
|+++|+++|++|++.+|+..... . ..+..++. ..+.++.+|++|.+++..+++ ++|+|||+++..
T Consensus 22 l~~~l~~~g~~v~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 97 (252)
T PRK06077 22 IAVRLAKEGSLVVVNAKKRAEEM-N---ETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLF 97 (252)
T ss_pred HHHHHHHCCCEEEEEeCCChHHH-H---HHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999988887542110 1 11112211 245678999999998877765 679999999852
Q ss_pred -----------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 -----------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++.+.- ..++||. |+ .+.. +..+...|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~sK~~~~~~~~~l~~~~ 172 (252)
T PRK06077 98 SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----PAYGLSIYGAMKAAVINLTKYLALEL 172 (252)
T ss_pred CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 1224556666666431 0245664 33 2221 112345677899988877653
Q ss_pred -cCCCEEEEeccccch
Q 026978 125 -AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -~gl~~tilr~g~~~~ 139 (230)
.++.+..++||++..
T Consensus 173 ~~~i~v~~v~Pg~i~t 188 (252)
T PRK06077 173 APKIRVNAIAPGFVKT 188 (252)
T ss_pred hcCCEEEEEeeCCccC
Confidence 368888889987753
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.7e-05 Score=67.99 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=45.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|++++|+... .+. .+.+. ...++++.+|++|.+++.++++ .+|+|||+++.
T Consensus 22 ~a~~L~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~ 93 (322)
T PRK07453 22 AAKALAKRGWHVIMACRNLKK------AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAV 93 (322)
T ss_pred HHHHHHHCCCEEEEEECCHHH------HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcc
Confidence 478899999999999997432 111 11221 2357889999999999888776 38999999984
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.3e-05 Score=65.05 Aligned_cols=120 Identities=11% Similarity=0.101 Sum_probs=80.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
|++.|+++|++|.++.|+.... ....+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 25 la~~l~~~G~~v~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~ 92 (266)
T PRK06171 25 IVKELLANGANVVNADIHGGDG------------QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRL 92 (266)
T ss_pred HHHHHHHCCCEEEEEeCCcccc------------ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCcc
Confidence 4678999999999999875422 12467889999999998887765 479999999842
Q ss_pred ------------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHH
Q 026978 70 ------------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 70 ------------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
++.+...+++++.. .+ -.++|. |+ .+..... ....|..+|..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----~~~~Y~~sK~a~~ 166 (266)
T PRK06171 93 LVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSE-----GQSCYAATKAALN 166 (266)
T ss_pred ccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCC-----CCchhHHHHHHHH
Confidence 12234555555543 33 345663 33 2221111 1235678898887
Q ss_pred HHHHH-------cCCCEEEEeccccc
Q 026978 120 RAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~ 138 (230)
.+.+. .|+....|.||++.
T Consensus 167 ~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 167 SFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHHHhhhcCeEEEEEeccccc
Confidence 76653 58999999999874
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.4e-05 Score=66.90 Aligned_cols=128 Identities=9% Similarity=0.064 Sum_probs=81.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|+++.|+.... ++ ....+. ..+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 34 la~~l~~~G~~v~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 108 (280)
T PLN02253 34 IVRLFHKHGAKVCIVDLQDDLG---QN--VCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPP 108 (280)
T ss_pred HHHHHHHcCCEEEEEeCCHHHH---HH--HHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC
Confidence 4788999999999999864321 01 111221 2358899999999999988877 689999999753
Q ss_pred ------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++.. .+ -.++|. |+ .+.... + ....|..+|..++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~---~--~~~~Y~~sK~a~~~~~~~l 182 (280)
T PLN02253 109 CPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGG---L--GPHAYTGSKHAVLGLTRSV 182 (280)
T ss_pred CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccC---C--CCcccHHHHHHHHHHHHHH
Confidence 12244566666543 22 234442 32 221110 0 112577899988877654
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.++||++..
T Consensus 183 a~e~~~~gi~v~~i~pg~v~t 203 (280)
T PLN02253 183 AAELGKHGIRVNCVSPYAVPT 203 (280)
T ss_pred HHHhhhcCeEEEEEeeCcccc
Confidence 478899999988753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.3e-05 Score=66.51 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=83.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|.+..|+.... +.+. ...++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 71 ~a~~l~~~G~~V~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~ 146 (300)
T PRK06128 71 TAIAFAREGADIALNYLPEEEQ----DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQT 146 (300)
T ss_pred HHHHHHHcCCEEEEEeCCcchH----HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence 4788999999998877654321 1111 11222 2346788999999988877664 689999999852
Q ss_pred -------------------ChhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 -------------------QFLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++...- .-.++|. |+...... ......|..+|..++.+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e 222 (300)
T PRK06128 147 AVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP----SPTLLDYASTKAAIVAFTKALAKQ 222 (300)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC----CCCchhHHHHHHHHHHHHHHHHHH
Confidence 1235667778776531 0136664 33221110 01123577899888776653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||++...
T Consensus 223 l~~~gI~v~~v~PG~i~t~ 241 (300)
T PRK06128 223 VAEKGIRVNAVAPGPVWTP 241 (300)
T ss_pred hhhcCcEEEEEEECcCcCC
Confidence 5899999999987543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.1e-05 Score=66.20 Aligned_cols=131 Identities=10% Similarity=0.084 Sum_probs=78.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC--CHHHHHHH-------hcCCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD--EHKKIVSI-------LKEVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~--d~~~L~~a-------l~g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|++++|+.... ..-.+.++......++++.+|++ +.+++.++ +..+|+|||+++..
T Consensus 28 la~~l~~~G~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~ 105 (247)
T PRK08945 28 AALTYARHGATVILLGRTEEKL--EAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGE 105 (247)
T ss_pred HHHHHHHCCCcEEEEeCCHHHH--HHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCC
Confidence 4688999999999999975321 00011111221235778888886 45444333 34689999999752
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++ ++.+ .++||. |+....... + ....|..+|...+.+++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~--~--~~~~Y~~sK~a~~~~~~~~~ 180 (247)
T PRK08945 106 LGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR--A--NWGAYAVSKFATEGMMQVLA 180 (247)
T ss_pred CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC--C--CCcccHHHHHHHHHHHHHHH
Confidence 123445555554 4566 778774 432211111 0 123567889888876653
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.++.++.+.||++.
T Consensus 181 ~~~~~~~i~~~~v~pg~v~ 199 (247)
T PRK08945 181 DEYQGTNLRVNCINPGGTR 199 (247)
T ss_pred HHhcccCEEEEEEecCCcc
Confidence 46888888888764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.3e-05 Score=64.24 Aligned_cols=129 Identities=9% Similarity=0.156 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|+.|.++.|+... +-.+.++.+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 ia~~l~~~G~~vi~~~r~~~~----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~ 95 (248)
T TIGR01832 21 IAVGLAEAGADIVGAGRSEPS----ETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRAD 95 (248)
T ss_pred HHHHHHHCCCEEEEEcCchHH----HHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478999999999999986421 111112222 2357899999999999886654 5899999998631
Q ss_pred ----------------hhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++.. .+.-.++|. |+ .+.... + ....|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~--~~~~Y~~sKaa~~~~~~~la~e 170 (248)
T TIGR01832 96 AEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---I--RVPSYTASKHGVAGLTKLLANE 170 (248)
T ss_pred hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---C--CCchhHHHHHHHHHHHHHHHHH
Confidence 2234556666543 221246653 32 221111 1 122567889888776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 171 ~~~~gi~v~~v~pg~v~t 188 (248)
T TIGR01832 171 WAAKGINVNAIAPGYMAT 188 (248)
T ss_pred hCccCcEEEEEEECcCcC
Confidence 489999999998754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.2e-05 Score=64.05 Aligned_cols=126 Identities=15% Similarity=0.232 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhh-cCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEF-QGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l-~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~-- 70 (230)
|++.|+++|++|++++|+... .+.+ ..+ ....+.++.+|+.|.+++.++++ .+|+|||+++...
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 94 (263)
T PRK09072 21 LAEALAAAGARLLLVGRNAEK------LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFA 94 (263)
T ss_pred HHHHHHHCCCEEEEEECCHHH------HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCcc
Confidence 478899999999999997432 1111 111 12368899999999988777654 5799999998631
Q ss_pred -----------------hhhHHHHHHHHHH----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHAIKV----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++.. .+ ..++|. |..+.... + ....|..+|..++.+++.
T Consensus 95 ~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~--~~~~Y~~sK~a~~~~~~~l~~ 168 (263)
T PRK09072 95 LLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGY---P--GYASYCASKFALRGFSEALRR 168 (263)
T ss_pred ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCC---C--CccHHHHHHHHHHHHHHHHHH
Confidence 2345556666543 33 345553 33332111 0 113567888877665543
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.++.++.+.||++.
T Consensus 169 ~~~~~~i~v~~v~Pg~~~ 186 (263)
T PRK09072 169 ELADTGVRVLYLAPRATR 186 (263)
T ss_pred HhcccCcEEEEEecCccc
Confidence 57888899998764
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.1e-05 Score=63.72 Aligned_cols=128 Identities=14% Similarity=0.240 Sum_probs=80.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|+++.|+.. +.+.+. .+. ..+++++.+|+++.+++.++++ .+|+|||+++..
T Consensus 25 ~a~~l~~~G~~Vi~~~r~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~ 98 (258)
T PRK06949 25 FAQVLAQAGAKVVLASRRVE------RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVST 98 (258)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 46789999999999999743 222111 121 2357899999999999888876 579999999852
Q ss_pred ------------------ChhhHHHHHHHHH----HhCC-------cceEec-cc-ccccCCCCCCCCchhHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIK----VAGN-------IKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~----~ag~-------Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
++.+..++++++. +.+. ..++|. |+ .+... ..+..+|..+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y~~sK~a~ 173 (258)
T PRK06949 99 TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV-----LPQIGLYCMSKAAV 173 (258)
T ss_pred CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----CCCccHHHHHHHHH
Confidence 1223444555443 2220 135553 32 22211 11223567888877
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+.+. .++.++.|+||++..
T Consensus 174 ~~~~~~la~~~~~~~i~v~~v~pG~v~t 201 (258)
T PRK06949 174 VHMTRAMALEWGRHGINVNAICPGYIDT 201 (258)
T ss_pred HHHHHHHHHHHHhcCeEEEEEeeCCCcC
Confidence 766543 589999999998754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.3e-05 Score=67.03 Aligned_cols=129 Identities=12% Similarity=0.148 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|+.|.++.|+.... . + ....+.. ..+..+.+|++|.+++..+++ ++|+|||+++...
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~~--~-~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~ 100 (278)
T PRK08277 26 MAKELARAGAKVAILDRNQEKA--E-A--VVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHP 100 (278)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH--H-H--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCc
Confidence 4788999999999999974321 0 0 1112222 247789999999988877655 6899999988310
Q ss_pred ---------------------------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHH
Q 026978 71 ---------------------------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYL 112 (230)
Q Consensus 71 ---------------------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~ 112 (230)
+.+. +.++..+++.+ ..++|. |+..... +..+...|.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~----~~~~~~~Y~ 175 (278)
T PRK08277 101 KATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFT----PLTKVPAYS 175 (278)
T ss_pred ccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcC----CCCCCchhH
Confidence 1111 23445555555 467764 3322111 111223577
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 113 EKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 113 ~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+|..++.+.+. .|+....|.||++..
T Consensus 176 ~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t 209 (278)
T PRK08277 176 AAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLT 209 (278)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcC
Confidence 899988877654 478999999998754
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-05 Score=64.06 Aligned_cols=121 Identities=9% Similarity=0.094 Sum_probs=78.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCH-HHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEH-KKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~-~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
++++|+++|++|+++.|+.... . ...+.++.+|++|. +.+.+.+..+|+|||+++..
T Consensus 21 ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~ 88 (235)
T PRK06550 21 QARAFLAQGAQVYGVDKQDKPD-----------L-SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTS 88 (235)
T ss_pred HHHHHHHCCCEEEEEeCCcccc-----------c-CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCC
Confidence 4678999999999999975321 1 24578999999997 55556666889999999842
Q ss_pred ----------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cC
Q 026978 70 ----------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQ 126 (230)
Q Consensus 70 ----------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~g 126 (230)
++.+..++++++. +.+ -.++|. |+ .+..... ....|..+|..++.+.+. .|
T Consensus 89 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-----~~~~Y~~sK~a~~~~~~~la~~~~~~g 162 (235)
T PRK06550 89 LEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGG-----GGAAYTASKHALAGFTKQLALDYAKDG 162 (235)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC-----CCcccHHHHHHHHHHHHHHHHHhhhcC
Confidence 1224455666654 334 356664 32 3321111 112466788877665543 58
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
+..+.++||++..
T Consensus 163 i~v~~v~pg~v~t 175 (235)
T PRK06550 163 IQVFGIAPGAVKT 175 (235)
T ss_pred eEEEEEeeCCccC
Confidence 9999999997743
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.6e-05 Score=65.43 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=81.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|.++.|+..... +..+.+.. ..+.++.+|+.|.+++.++++ .+|+|||+++..
T Consensus 24 l~~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 98 (252)
T PRK07035 24 IAKLLAQQGAHVIVSSRKLDGCQ-----AVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPY 98 (252)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 47889999999999999743210 11122222 236788999999988876655 479999999842
Q ss_pred ------------------ChhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+...++++ +++.+ ..+++. |+ .+... ..+...|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~al~~~~~~l 172 (252)
T PRK07035 99 FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSP-----GDFQGIYSITKAAVISMTKAF 172 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCC-----CCCCcchHHHHHHHHHHHHHH
Confidence 11233444444 45555 567663 33 33211 11233577899988877654
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.|.||....
T Consensus 173 ~~e~~~~gi~v~~i~PG~v~t 193 (252)
T PRK07035 173 AKECAPFGIRVNALLPGLTDT 193 (252)
T ss_pred HHHHhhcCEEEEEEeeccccC
Confidence 489999999987743
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-05 Score=66.05 Aligned_cols=129 Identities=16% Similarity=0.182 Sum_probs=78.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
|+++|+++|+.|+++.|+.... . +..+.+.. ..+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 16 la~~l~~~G~~v~~~~r~~~~~--~---~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~ 90 (254)
T TIGR02415 16 IAERLAKDGFAVAVADLNEETA--K---ETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPI 90 (254)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH--H---HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 4788999999999999874321 0 11122222 347889999999998887754 4699999998631
Q ss_pred ------------------hhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...++++ +++.+.-+++|. |+.+..... .....|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~~l~~ 166 (254)
T TIGR02415 91 TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN----PILSAYSSTKFAVRGLTQTAAQ 166 (254)
T ss_pred CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----CCCcchHHHHHHHHHHHHHHHH
Confidence 1223333333 344331246653 332211110 0123567889888776653
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.++..+.++||+..
T Consensus 167 ~~~~~~i~v~~v~Pg~i~ 184 (254)
T TIGR02415 167 ELAPKGITVNAYCPGIVK 184 (254)
T ss_pred HhcccCeEEEEEecCccc
Confidence 47889999998764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.3e-05 Score=75.02 Aligned_cols=128 Identities=16% Similarity=0.291 Sum_probs=84.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|++++|+... .+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 387 la~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 460 (657)
T PRK07201 387 TAIKVAEAGATVFLVARNGEA------LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSI 460 (657)
T ss_pred HHHHHHHCCCEEEEEECCHHH------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 478899999999999997432 1111 1221 2357889999999999988877 5899999998520
Q ss_pred ---------------------hhhHHH----HHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 ---------------------FLDQLE----IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 ---------------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..+ ++..+++.+ ..++|. |+.+.... .+ ....|..+|..++.+.+.
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--~~--~~~~Y~~sK~a~~~~~~~ 535 (657)
T PRK07201 461 RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTN--AP--RFSAYVASKAALDAFSDV 535 (657)
T ss_pred CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCC--CC--CcchHHHHHHHHHHHHHH
Confidence 112223 344456666 678774 43322111 11 123577899888876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 536 la~e~~~~~i~v~~v~pg~v~T 557 (657)
T PRK07201 536 AASETLSDGITFTTIHMPLVRT 557 (657)
T ss_pred HHHHHHhhCCcEEEEECCcCcc
Confidence 589999999998753
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.6e-05 Score=66.11 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|+.|+++.|+..... + ....+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 la~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~ 99 (264)
T PRK07576 25 IAQAFARAGANVAVASRSQEKVD---A--AVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFP 99 (264)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH---H--HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999999753210 1 111221 2346788999999998888765 469999998742
Q ss_pred -----------------ChhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 -----------------QFLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++... ..-.+++. |+ .|... ......|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----~~~~~~Y~asK~a~~~l~~~la~e 174 (264)
T PRK07576 100 APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----MPMQAHVCAAKAGVDMLTRTLALE 174 (264)
T ss_pred CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----CCCccHHHHHHHHHHHHHHHHHHH
Confidence 134556677666542 10136653 33 22111 11123567899888877664
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+..+.++||+..
T Consensus 175 ~~~~gi~v~~v~pg~~~ 191 (264)
T PRK07576 175 WGPEGIRVNSIVPGPIA 191 (264)
T ss_pred hhhcCeEEEEEeccccc
Confidence 57888999998864
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.8e-05 Score=65.32 Aligned_cols=128 Identities=9% Similarity=0.122 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|+++.|+... .+.+ ..++. ..+.++.+|++|.+++.++++ +.|+|||+++..
T Consensus 27 la~~l~~~G~~vv~~~r~~~~------~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~ 100 (255)
T PRK06113 27 IAITFATAGASVVVSDINADA------ANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGG 100 (255)
T ss_pred HHHHHHHCCCeEEEEeCCHHH------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999999886432 1111 11221 246788999999998877655 469999999853
Q ss_pred -----------------ChhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 -----------------QFLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++. +.+ ..++|. |+...... ..+...|..+|..++.+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~ 175 (255)
T PRK06113 101 PKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK----NINMTSYASSKAAASHLVRNMAF 175 (255)
T ss_pred CCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCC----CCCcchhHHHHHHHHHHHHHHHH
Confidence 1235566677665 334 346663 43221111 11223577899888877654
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.+.||++..
T Consensus 176 ~~~~~~i~v~~v~pg~~~t 194 (255)
T PRK06113 176 DLGEKNIRVNGIAPGAILT 194 (255)
T ss_pred HhhhhCeEEEEEecccccc
Confidence 478888889988753
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.9e-05 Score=63.08 Aligned_cols=127 Identities=13% Similarity=0.175 Sum_probs=79.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
+++.|+++|++|+++.|... ++.+.+. ...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 ~a~~l~~~G~~v~~~~~~~~-----~~~~~l~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~ 94 (237)
T PRK12742 22 IVRRFVTDGANVRFTYAGSK-----DAAERLA--QETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALEL 94 (237)
T ss_pred HHHHHHHCCCEEEEecCCCH-----HHHHHHH--HHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccC
Confidence 46789999999988776432 1222221 12367889999999988887765 4799999998631
Q ss_pred ------------hhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCC
Q 026978 71 ------------FLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQI 127 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl 127 (230)
+.+...++.++... . ..++|. |+ .+... +..+...|..+|..++.+.+. .|+
T Consensus 95 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi 169 (237)
T PRK12742 95 DADDIDRLFKINIHAPYHASVEAARQMPE-GGRIIIIGSVNGDRM----PVAGMAAYAASKSALQGMARGLARDFGPRGI 169 (237)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHHhc-CCeEEEEeccccccC----CCCCCcchHHhHHHHHHHHHHHHHHHhhhCe
Confidence 12334444443332 2 346663 33 33111 111234577899888876653 579
Q ss_pred CEEEEeccccch
Q 026978 128 PYTFVSANLCGA 139 (230)
Q Consensus 128 ~~tilr~g~~~~ 139 (230)
..+.|+||+...
T Consensus 170 ~v~~v~Pg~~~t 181 (237)
T PRK12742 170 TINVVQPGPIDT 181 (237)
T ss_pred EEEEEecCcccC
Confidence 999999998754
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.6e-05 Score=66.39 Aligned_cols=131 Identities=13% Similarity=0.132 Sum_probs=77.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC---CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI---GVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~---gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|+++.|+..... +....+... -+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 16 la~~la~~G~~vv~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 90 (272)
T PRK07832 16 TALRLAAQGAELFLTDRDADGLA-----QTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISA 90 (272)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 46789999999999998743210 111122211 23457899999888776554 479999999853
Q ss_pred ------------------ChhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
++.+..++++++. +.+...++|. |+...... .+ ....|..+|..++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--~~--~~~~Y~~sK~a~~~~~~~l~ 166 (272)
T PRK07832 91 WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA--LP--WHAAYSASKFGLRGLSEVLR 166 (272)
T ss_pred CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC--CC--CCcchHHHHHHHHHHHHHHH
Confidence 1234556666653 3221346663 33221111 11 11246677876555443
Q ss_pred ----HcCCCEEEEeccccchh
Q 026978 124 ----AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ----~~gl~~tilr~g~~~~~ 140 (230)
..++.++.++||.....
T Consensus 167 ~e~~~~~i~v~~v~Pg~v~t~ 187 (272)
T PRK07832 167 FDLARHGIGVSVVVPGAVKTP 187 (272)
T ss_pred HHhhhcCcEEEEEecCcccCc
Confidence 36899999999987643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.1e-05 Score=73.10 Aligned_cols=127 Identities=14% Similarity=0.144 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|+.|++++|+.... +.+ ..+.. .++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 438 la~~L~~~Ga~Vvl~~r~~~~~------~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~ 511 (681)
T PRK08324 438 TAKRLAAEGACVVLADLDEEAA------EAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAIS 511 (681)
T ss_pred HHHHHHHCcCEEEEEeCCHHHH------HHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 4678999999999999975321 111 11211 368899999999998887775 689999999853
Q ss_pred -----------------ChhhHHHHHHHH----HHhCCc-ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAI----KVAGNI-KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa----~~ag~V-kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++ ++.+ . .+||. |+...... ......|..+|...+.+++.
T Consensus 512 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~~~----~~~~~~Y~asKaa~~~l~~~la 586 (681)
T PRK08324 512 GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAVNP----GPNFGAYGAAKAAELHLVRQLA 586 (681)
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCccccCC----CCCcHHHHHHHHHHHHHHHHHH
Confidence 123455665554 4444 3 56663 33221110 01234677899998877654
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+.++.|+|+.++
T Consensus 587 ~e~~~~gIrvn~v~Pg~v~ 605 (681)
T PRK08324 587 LELGPDGIRVNGVNPDAVV 605 (681)
T ss_pred HHhcccCeEEEEEeCceee
Confidence 46999999999885
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.7e-05 Score=64.92 Aligned_cols=132 Identities=7% Similarity=0.064 Sum_probs=79.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|+.|.+..|... ++.+.+ ..+. ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 18 ~a~~l~~~G~~vv~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 92 (248)
T PRK06123 18 TALLAAERGYAVCLNYLRNR-----DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILE 92 (248)
T ss_pred HHHHHHHCCCeEEEecCCCH-----HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 46889999999877664321 111111 1222 2347789999999999888776 5799999998531
Q ss_pred --------------------hhhHHHHHHHHHHhC-----Cc-ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 --------------------FLDQLEIVHAIKVAG-----NI-KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag-----~V-kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.+..++++++.+.- .. .++|. |+.+...... . ....|..+|..++.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~-~~~~Y~~sKaa~~~~~~ 169 (248)
T PRK06123 93 AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--G-EYIDYAASKGAIDTMTI 169 (248)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC--C-CccchHHHHHHHHHHHH
Confidence 124455666665421 01 13443 3322111110 0 01247789998887654
Q ss_pred H-------cCCCEEEEeccccchh
Q 026978 124 A-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~~ 140 (230)
. .+++++.|+||.+...
T Consensus 170 ~la~~~~~~~i~v~~i~pg~v~~~ 193 (248)
T PRK06123 170 GLAKEVAAEGIRVNAVRPGVIYTE 193 (248)
T ss_pred HHHHHhcccCeEEEEEecCcccCc
Confidence 3 4899999999988653
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.7e-05 Score=65.80 Aligned_cols=128 Identities=6% Similarity=0.118 Sum_probs=79.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|+.|++++|+.... ++. ...+. ...+..+.+|++|.+++.++++ .+|+|||+++..
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~~---~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 24 TVELLLEAGASVAICGRDEERL---ASA--EARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQG 98 (265)
T ss_pred HHHHHHHCCCeEEEEeCCHHHH---HHH--HHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4788999999999999975321 111 11121 1246788999999988876654 579999999853
Q ss_pred C-----------------------hhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH-
Q 026978 70 Q-----------------------FLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE- 123 (230)
Q Consensus 70 ~-----------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~- 123 (230)
. +...+.++..+++.+ ..++|. |+ .+..... ....|..+|...+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----~~~~y~asKaal~~~~~~ 172 (265)
T PRK07062 99 RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEP-----HMVATSAARAGLLNLVKS 172 (265)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCC-----CchHhHHHHHHHHHHHHH
Confidence 1 012334455555555 467664 33 2221110 12346677877665443
Q ss_pred ------HcCCCEEEEeccccch
Q 026978 124 ------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ------~~gl~~tilr~g~~~~ 139 (230)
..|+..+.|.||+...
T Consensus 173 la~e~~~~gi~v~~i~PG~v~t 194 (265)
T PRK07062 173 LATELAPKGVRVNSILLGLVES 194 (265)
T ss_pred HHHHhhhcCeEEEEEecCcccc
Confidence 2689999999987743
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.7e-05 Score=63.15 Aligned_cols=134 Identities=11% Similarity=0.168 Sum_probs=83.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-CcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
|++.|+++|++|+++.|+..... .+.+.+.+ ..+. ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 22 IALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCc
Confidence 47889999999999999754311 00011110 1121 2347788999999999888766 679999999863
Q ss_pred -------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++.. .+ -.+++. |+ .+... ....+...|..+|..++.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~---~~~~~~~~Y~~sK~a~~~~~~~ 177 (273)
T PRK08278 102 NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDP---KWFAPHTAYTMAKYGMSLCTLG 177 (273)
T ss_pred CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccc---cccCCcchhHHHHHHHHHHHHH
Confidence 12356667777653 22 235543 32 22111 1001234677999999887764
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.++..+.|.||.+.
T Consensus 178 la~el~~~~I~v~~i~Pg~~i 198 (273)
T PRK08278 178 LAEEFRDDGIAVNALWPRTTI 198 (273)
T ss_pred HHHHhhhcCcEEEEEeCCCcc
Confidence 47889999998543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.8e-05 Score=65.23 Aligned_cols=130 Identities=18% Similarity=0.191 Sum_probs=80.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.++.|+... .+.+ ..++ ...+..+.+|++|.+++.++++ .+|+|||+++...
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 25 VALAYVEAGAQVAIAARHLDA------LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHHHHHHCCCEEEEEcCCHHH------HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 478899999999999997432 1111 1222 2347788999999998887765 6899999998631
Q ss_pred -------------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+...+++++. +.+.-.++|. |+ .|...... .....|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---~~~~~Y~asKaal~~~~~~l 175 (253)
T PRK05867 99 VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP---QQVSHYCASKAAVIHLTKAM 175 (253)
T ss_pred CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC---CCccchHHHHHHHHHHHHHH
Confidence 223444555543 3320124543 32 33211100 0113577899888876653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 176 a~e~~~~gI~vn~i~PG~v~t 196 (253)
T PRK05867 176 AVELAPHKIRVNSVSPGYILT 196 (253)
T ss_pred HHHHhHhCeEEEEeecCCCCC
Confidence 589999999988743
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=75.96 Aligned_cols=103 Identities=10% Similarity=0.112 Sum_probs=70.7
Q ss_pred hcCCCeEE--EEecCCCHHHHHHHhc--CCCEEEEcCCCC------------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 34 FQGIGVTI--IEGELDEHKKIVSILK--EVDVVISTVAYP------------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 34 l~~~gv~v--v~gD~~d~~~L~~al~--g~D~Vi~~~~~~------------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
|...|.++ ..+|++|.+.+...++ +.|+||||++.. |+.++.+|+++|++.| +++++
T Consensus 400 L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~ 478 (668)
T PLN02260 400 CEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMN 478 (668)
T ss_pred HHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEE
Confidence 33345454 5678999999988887 789999999753 2457899999999999 88877
Q ss_pred ccc---ccc----------cCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCEEEEeccccc
Q 026978 92 PSE---FGC----------EEDKVRPL-PPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCG 138 (230)
Q Consensus 92 ~S~---~g~----------~~~~~~~~-~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~ 138 (230)
.|+ |+. ...+..+. .|...|..+|..+|++++.. -++.++|..+.+
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~ 538 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPI 538 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEec
Confidence 632 432 11222222 23357889999999999875 245566655544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.7e-05 Score=63.55 Aligned_cols=128 Identities=10% Similarity=0.110 Sum_probs=79.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|+++.|.... +.+. ...+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 la~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 25 IALDLAAHGFDVAVHYNRSRD-----EAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFE 99 (258)
T ss_pred HHHHHHHCCCEEEEEeCCCHH-----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCC
Confidence 478899999999988775321 1111 11121 2357889999999999888775 379999999852
Q ss_pred ------------------ChhhHHHHHHHHHHhC---CcceEec--ccccccCCCCCCCCch-hHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIKVAG---NIKRFLP--SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag---~Vkr~v~--S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++.... .-+++|. |.-+.. + .|. ..|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~-----~-~p~~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 100 YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN-----L-NPDFLSYTLSKAALWTATRTL 173 (258)
T ss_pred CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----C-CCCchHHHHHHHHHHHHHHHH
Confidence 1335566777665532 0234442 211111 1 122 3677999887766554
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++..+.++||+...
T Consensus 174 a~~~~~~i~v~~i~PG~v~t 193 (258)
T PRK09134 174 AQALAPRIRVNAIGPGPTLP 193 (258)
T ss_pred HHHhcCCcEEEEeecccccC
Confidence 248888899987653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.7e-05 Score=63.77 Aligned_cols=129 Identities=9% Similarity=0.109 Sum_probs=76.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.++.|... ++.+.+ ..++ ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 18 la~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 92 (248)
T PRK06947 18 TAVLAAARGWSVGINYARDA-----AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVA 92 (248)
T ss_pred HHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 47889999999987654321 121111 1121 2357899999999988876654 5899999998531
Q ss_pred --------------------hhhHHHHHHHHH-HhCCc------ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 71 --------------------FLDQLEIVHAIK-VAGNI------KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~-~ag~V------kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
+.+...+++++. ... . .+||. |+ .+...... ....|..+|...+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~ii~~sS~~~~~~~~~----~~~~Y~~sK~~~~~~ 167 (248)
T PRK06947 93 PSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDRGGRGGAIVNVSSIASRLGSPN----EYVDYAGSKGAVDTL 167 (248)
T ss_pred CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCCCcEEEEECchhhcCCCCC----CCcccHhhHHHHHHH
Confidence 123344544332 222 2 23653 33 22111100 112577889887765
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .++.++.++||++..
T Consensus 168 ~~~la~~~~~~~i~v~~i~Pg~v~t 192 (248)
T PRK06947 168 TLGLAKELGPHGVRVNAVRPGLIET 192 (248)
T ss_pred HHHHHHHhhhhCcEEEEEeccCccc
Confidence 543 479999999998754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.3e-05 Score=63.83 Aligned_cols=129 Identities=11% Similarity=0.142 Sum_probs=79.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|++|.++.|...... .+..+.++ ...+.++.+|++|.+++.++++ ..|++||+++..
T Consensus 14 ~a~~l~~~G~~v~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~ 89 (239)
T TIGR01831 14 IANRLAADGFEICVHYHSGRSDA----ESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRD 89 (239)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHH----HHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47889999999999987643210 01111222 2358889999999998877665 469999998752
Q ss_pred -----------------ChhhHHHHHHHH-----HHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAI-----KVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIE-- 123 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa-----~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~-- 123 (230)
++.+..++++++ ++.+ ..++|. |+. +.... .....|..+|...+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 163 (239)
T TIGR01831 90 AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN-----RGQVNYSAAKAGLIGATKAL 163 (239)
T ss_pred CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC-----CCCcchHHHHHHHHHHHHHH
Confidence 123455666665 2234 456663 332 21111 012356678876654443
Q ss_pred -----HcCCCEEEEeccccch
Q 026978 124 -----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -----~~gl~~tilr~g~~~~ 139 (230)
..|+..+.++||++..
T Consensus 164 a~e~~~~gi~v~~v~Pg~v~t 184 (239)
T TIGR01831 164 AVELAKRKITVNCIAPGLIDT 184 (239)
T ss_pred HHHHhHhCeEEEEEEEccCcc
Confidence 2589999999998653
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.5e-05 Score=64.47 Aligned_cols=130 Identities=9% Similarity=0.184 Sum_probs=80.8
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++ |.++.|+.... + +....+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 la~~l~~~G~~~V~~~~r~~~~~--~---~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~ 96 (260)
T PRK06198 22 IARAFAERGAAGLVICGRNAEKG--E---AQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTD 96 (260)
T ss_pred HHHHHHHCCCCeEEEEcCCHHHH--H---HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence 46789999998 99999874321 1 0111222 2346678999999998887765 5799999998531
Q ss_pred -------------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++.+ .+.-.++|. |+.+..... + ....|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--~--~~~~Y~~sK~a~~~~~~~~a 172 (260)
T PRK06198 97 RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ--P--FLAAYCASKGALATLTRNAA 172 (260)
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC--C--CcchhHHHHHHHHHHHHHHH
Confidence 2345566666643 221135653 332211100 0 123577899888877653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++..+.++||+...
T Consensus 173 ~e~~~~~i~v~~i~pg~~~t 192 (260)
T PRK06198 173 YALLRNRIRVNGLNIGWMAT 192 (260)
T ss_pred HHhcccCeEEEEEeeccccC
Confidence 468888899988754
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.7e-05 Score=63.41 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|+... ...+.++.. ...+.++.+|++|.+++.++++ +.|++||+++..
T Consensus 24 ia~~l~~~G~~vv~~~~~~~~----~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~ 98 (251)
T PRK12481 24 MAIGLAKAGADIVGVGVAEAP----ETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQD 98 (251)
T ss_pred HHHHHHHCCCEEEEecCchHH----HHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 478899999999998886321 111112222 2357889999999999888775 579999999853
Q ss_pred ---------------ChhhHHHHHHHH----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------------QFLDQLEIVHAI----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+...+.+++ ++.+.-.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---~--~~~~Y~asK~a~~~l~~~la~e 173 (251)
T PRK12481 99 LLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG---I--RVPSYTASKSAVMGLTRALATE 173 (251)
T ss_pred cccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC---C--CCcchHHHHHHHHHHHHHHHHH
Confidence 122334444443 33321146653 32222111 1 112567899888776653
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 174 ~~~~girvn~v~PG~v~ 190 (251)
T PRK12481 174 LSQYNINVNAIAPGYMA 190 (251)
T ss_pred HhhcCeEEEEEecCCCc
Confidence 58999999999874
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.5e-05 Score=61.95 Aligned_cols=127 Identities=8% Similarity=0.083 Sum_probs=77.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... .+.+. ...+..++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ~a~~l~~~G~~v~~~~r~~~~------~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 94 (255)
T PRK06057 23 TARRLAAEGATVVVGDIDPEA------GKAAA--DEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPED 94 (255)
T ss_pred HHHHHHHcCCEEEEEeCCHHH------HHHHH--HHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 478899999999999996431 11111 11234688999999999888776 5699999997531
Q ss_pred ------------------hhhHH----HHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQL----EIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 71 ------------------~~~~~----~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
+.+.. .++...++.+ ..++|. |+ .+..... .+...|..+|...+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~----~~~~~Y~~sKaal~~~~~~l~ 169 (255)
T PRK06057 95 DSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSA----TSQISYTASKGGVLAMSRELG 169 (255)
T ss_pred CCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCC----CCCcchHHHHHHHHHHHHHHH
Confidence 11222 2334444555 456653 33 2221110 012356778866554443
Q ss_pred ----HcCCCEEEEeccccchh
Q 026978 124 ----AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ----~~gl~~tilr~g~~~~~ 140 (230)
..|+..+.|+||++...
T Consensus 170 ~~~~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 170 VQFARQGIRVNALCPGPVNTP 190 (255)
T ss_pred HHHHhhCcEEEEEeeCCcCCc
Confidence 25899999999987643
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.9e-05 Score=64.36 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++..|+.... +.+.+.. +. ...+.++.+|++|.+++.++++ ++|++||+++..
T Consensus 65 ia~~L~~~G~~Vi~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 140 (294)
T PRK07985 65 AAIAYAREGADVAISYLPVEEE----DAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQV 140 (294)
T ss_pred HHHHHHHCCCEEEEecCCcchh----hHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCc
Confidence 4788999999999887754321 1112221 11 2246789999999988776654 579999998742
Q ss_pred -------------------ChhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 -------------------QFLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+...+++++...- .-.++|. |+...... .+ ....|..+|..++.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~--~~--~~~~Y~asKaal~~l~~~la~e 216 (294)
T PRK07985 141 AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP--SP--HLLDYAATKAAILNYSRGLAKQ 216 (294)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC--CC--CcchhHHHHHHHHHHHHHHHHH
Confidence 1234566777765421 0135664 43221111 00 123577899888766543
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|++...|+||+...
T Consensus 217 l~~~gIrvn~i~PG~v~t 234 (294)
T PRK07985 217 VAEKGIRVNIVAPGPIWT 234 (294)
T ss_pred HhHhCcEEEEEECCcCcc
Confidence 589999999998754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.5e-05 Score=62.93 Aligned_cols=129 Identities=12% Similarity=0.147 Sum_probs=80.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|... .+..+.+..+ ...+..+.+|++|.+++.++++ .+|+|||+++..
T Consensus 26 ~a~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~ 100 (253)
T PRK08993 26 MALGLAEAGCDIVGINIVEP----TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRRED 100 (253)
T ss_pred HHHHHHHCCCEEEEecCcch----HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 47889999999998876532 1112222222 2347788999999998888776 579999999863
Q ss_pred ---------------ChhhHHHHHHHHHH----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------------QFLDQLEIVHAIKV----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++.. .+.-.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~--~~~~Y~~sKaa~~~~~~~la~e 175 (253)
T PRK08993 101 AIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG---I--RVPSYTASKSGVMGVTRLMANE 175 (253)
T ss_pred cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---C--CCcchHHHHHHHHHHHHHHHHH
Confidence 12344555555543 220135553 32222111 1 112566889887766543
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....++||++..
T Consensus 176 ~~~~gi~v~~v~pG~v~T 193 (253)
T PRK08993 176 WAKHNINVNAIAPGYMAT 193 (253)
T ss_pred hhhhCeEEEEEeeCcccC
Confidence 588899999998854
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.2e-05 Score=61.74 Aligned_cols=126 Identities=10% Similarity=0.159 Sum_probs=77.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|+++.|+.... . ..+...+++++.+|++|.+++.++++ ++|++||+++...
T Consensus 18 ia~~l~~~G~~V~~~~r~~~~~-----~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~ 89 (236)
T PRK06483 18 LAWHLLAQGQPVIVSYRTHYPA-----I---DGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEK 89 (236)
T ss_pred HHHHHHHCCCeEEEEeCCchhH-----H---HHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCC
Confidence 4678999999999999975321 1 12333568899999999888776544 4799999998531
Q ss_pred ----------------hhhHHH----HHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLE----IVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~----ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+... ++...++.+ ...++|. |+..... ..+ ....|..+|..++.+.+.
T Consensus 90 ~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~--~~~~Y~asKaal~~l~~~~a~e 165 (236)
T PRK06483 90 PGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK--GSD--KHIAYAASKAALDNMTLSFAAK 165 (236)
T ss_pred cCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc--CCC--CCccHHHHHHHHHHHHHHHHHH
Confidence 112222 333333322 0235554 3322111 111 123577999998887764
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.++....|.||++.
T Consensus 166 ~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 166 LAPEVKVNSIAPALIL 181 (236)
T ss_pred HCCCcEEEEEccCcee
Confidence 25788888898763
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.5e-05 Score=62.78 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=80.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|+.|.++.|+.... +.+. .+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 17 ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~ 90 (252)
T PRK07677 17 MAKRFAEEGANVVITGRTKEKL------EEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNF 90 (252)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC
Confidence 4678999999999999975321 1111 121 2457889999999988877654 579999999742
Q ss_pred ------------------ChhhHHHHHHHHHH----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIKV----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++.+ .+.-.++|. |.+|..... ....|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----~~~~Y~~sKaa~~~~~~~l 165 (252)
T PRK07677 91 ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP-----GVIHSAAAKAGVLAMTRTL 165 (252)
T ss_pred CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC-----CCcchHHHHHHHHHHHHHH
Confidence 12345666777633 221235553 444432111 112566788777665542
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+..+.|+||+..
T Consensus 166 a~e~~~~~gi~v~~v~PG~v~ 186 (252)
T PRK07677 166 AVEWGRKYGIRVNAIAPGPIE 186 (252)
T ss_pred HHHhCcccCeEEEEEeecccc
Confidence 47889999998875
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.4e-05 Score=62.91 Aligned_cols=127 Identities=17% Similarity=0.270 Sum_probs=83.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcC---CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQG---IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~---~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
+++.|.++||+|+++.|+.+ |+..++ +++. -.++++..|++|++++....+ .+|++|+++|..
T Consensus 22 ~A~~lA~~g~~liLvaR~~~------kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g 95 (265)
T COG0300 22 LAKQLARRGYNLILVARRED------KLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFG 95 (265)
T ss_pred HHHHHHHCCCEEEEEeCcHH------HHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcC
Confidence 47889999999999999854 333322 2322 236789999999988887664 589999999975
Q ss_pred C-----------------------hhhHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCch-hHHHHHHHHHHH---
Q 026978 70 Q-----------------------FLDQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPF-EAYLEKKRIVRR--- 120 (230)
Q Consensus 70 ~-----------------------~~~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~-~~~~~~K~~~e~--- 120 (230)
. ..-+..++.-+.+.| -.++|- |..|.-.. |. .-|..+|..+..
T Consensus 96 ~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~------p~~avY~ATKa~v~~fSe 168 (265)
T COG0300 96 TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPT------PYMAVYSATKAFVLSFSE 168 (265)
T ss_pred CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC------cchHHHHHHHHHHHHHHH
Confidence 1 122444555555555 356653 43332211 33 346688876543
Q ss_pred ----HHHHcCCCEEEEeccccchh
Q 026978 121 ----AIEAAQIPYTFVSANLCGAY 140 (230)
Q Consensus 121 ----~l~~~gl~~tilr~g~~~~~ 140 (230)
.|+..|+..+.+.||+..-.
T Consensus 169 aL~~EL~~~gV~V~~v~PG~~~T~ 192 (265)
T COG0300 169 ALREELKGTGVKVTAVCPGPTRTE 192 (265)
T ss_pred HHHHHhcCCCeEEEEEecCccccc
Confidence 33447899999999987643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.8e-05 Score=70.52 Aligned_cols=128 Identities=12% Similarity=0.101 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|+++.|+... .+.+ +.++ ..++.++.+|++|.+++.++++ .+|+|||++|..
T Consensus 331 ~a~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 331 TALAFAREGAEVVASDIDEAA------AERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGM 404 (582)
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCC
Confidence 468899999999999997432 1111 1222 2357889999999999888776 379999999863
Q ss_pred ------------------ChhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
|+.+..+++++ +++.+.-.++|. |+ .|.... .....|..+|...+.+.+.
T Consensus 405 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~~sKaa~~~~~~~l 479 (582)
T PRK05855 405 AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----RSLPAYATSKAAVLMLSECL 479 (582)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----CCCcHHHHHHHHHHHHHHHH
Confidence 12234444444 344441136663 33 222111 1234677899887766542
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.|.||++-.
T Consensus 480 ~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 480 RAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred HHHhcccCcEEEEEEeCCCcc
Confidence 589999999998753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.2e-05 Score=63.33 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|++|.++.|+.. +.+.+ +.+. ...+..+.+|++|.+++.++++ .+|+|||+++..
T Consensus 25 ia~~l~~~G~~V~~~~r~~~------~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~ 98 (296)
T PRK05872 25 LARRLHARGAKLALVDLEEA------ELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG 98 (296)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 46789999999999999743 22221 1221 1224455699999998877754 579999999863
Q ss_pred -----------------ChhhHHHHHHHHHHh---CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 -----------------QFLDQLEIVHAIKVA---GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~a---g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++... . -.++|. |+.+.... ......|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~asKaal~~~~~~l~~e 173 (296)
T PRK05872 99 GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAA----APGMAAYCASKAGVEAFANALRLE 173 (296)
T ss_pred cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCC----CCCchHHHHHHHHHHHHHHHHHHH
Confidence 123445556655431 2 246663 33222111 11123677899888776643
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+..+.+.||+...
T Consensus 174 ~~~~gi~v~~v~Pg~v~T 191 (296)
T PRK05872 174 VAHHGVTVGSAYLSWIDT 191 (296)
T ss_pred HHHHCcEEEEEecCcccc
Confidence 589999999987643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.7e-05 Score=64.37 Aligned_cols=128 Identities=20% Similarity=0.244 Sum_probs=78.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
+++.|+++|++|.+++|+.. +.+.+ +.++. ..+.++.+|++|.+++.++++ ++|++||+++..
T Consensus 23 ia~~la~~G~~Vvl~~R~~~------~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~ 96 (330)
T PRK06139 23 TAEAFARRGARLVLAARDEE------ALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGA 96 (330)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 46789999999999999743 22111 12222 246678999999999888763 679999999853
Q ss_pred ------------------ChhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------------QFLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++.++ .++.+ -.++|. |+.+.... .+ ....|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~--~p--~~~~Y~asKaal~~~~~sL~ 171 (330)
T PRK06139 97 VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAA--QP--YAAAYSASKFGLRGFSEALR 171 (330)
T ss_pred CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCC--CC--CchhHHHHHHHHHHHHHHHH
Confidence 12233343343 34554 456663 33221111 11 123577899876554432
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.++..+.|.||++..
T Consensus 172 ~El~~~~gI~V~~v~Pg~v~T 192 (330)
T PRK06139 172 GELADHPDIHVCDVYPAFMDT 192 (330)
T ss_pred HHhCCCCCeEEEEEecCCccC
Confidence 378889999987754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.2e-05 Score=68.22 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=82.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|+++.|+.. +.+.+.......+..+.+|++|.+++.++++ .+|+|||+++..
T Consensus 285 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~ 358 (520)
T PRK06484 285 VADRFAAAGDRLLIIDRDAE------GAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFK 358 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCC
Confidence 47889999999999999743 2222222112346678999999998887765 479999999853
Q ss_pred ----------------ChhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ----------------QFLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++... + -.++|. |+ .+.... .+...|..+|...+.+.+.
T Consensus 359 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaal~~l~~~la~e~ 432 (520)
T PRK06484 359 PSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-GGVIVNLGSIASLLAL-----PPRNAYCASKAAVTMLSRSLACEW 432 (520)
T ss_pred ChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-CCEEEEECchhhcCCC-----CCCchhHHHHHHHHHHHHHHHHHh
Confidence 123455566665542 2 246653 33 332111 1223677899888866653
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 433 ~~~gI~vn~v~PG~v~t 449 (520)
T PRK06484 433 APAGIRVNTVAPGYIET 449 (520)
T ss_pred hhhCeEEEEEEeCCccC
Confidence 479999999998753
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=7.1e-05 Score=61.39 Aligned_cols=129 Identities=14% Similarity=0.144 Sum_probs=79.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC---------C--EEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV---------D--VVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~---------D--~Vi~~~~~~ 69 (230)
|+++|+++|++|.+++|+... +.+.+......+++++.+|++|.+++.++++.+ + .+||+++..
T Consensus 17 ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~ 91 (251)
T PRK06924 17 IANQLLEKGTHVISISRTENK-----ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMV 91 (251)
T ss_pred HHHHHHhcCCEEEEEeCCchH-----HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceec
Confidence 578999999999999997521 111111111346889999999999998877632 2 678877642
Q ss_pred --------------------Chhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 --------------------QFLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 --------------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+ .+.++..+++.+..+++|. |+ .+.. +..+...|..+|..++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~sKaa~~~~~~ 166 (251)
T PRK06924 92 APIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----PYFGWSAYCSSKAGLDMFTQ 166 (251)
T ss_pred ccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----CCCCcHHHhHHHHHHHHHHH
Confidence 1122 3344455555331457664 33 2221 11233467789998887664
Q ss_pred H---------cCCCEEEEeccccch
Q 026978 124 A---------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~---------~gl~~tilr~g~~~~ 139 (230)
. .++....|+||++..
T Consensus 167 ~la~e~~~~~~~i~v~~v~Pg~v~t 191 (251)
T PRK06924 167 TVATEQEEEEYPVKIVAFSPGVMDT 191 (251)
T ss_pred HHHHHhhhcCCCeEEEEecCCcccc
Confidence 2 367788889987653
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00013 Score=60.45 Aligned_cols=126 Identities=15% Similarity=0.113 Sum_probs=78.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+++|+.. +.+.+..-....+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~ 95 (263)
T PRK06200 22 LVERFLAEGARVAVLERSAE------KLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNT 95 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCC
Confidence 47889999999999999743 2222211112357889999999988877765 5799999998521
Q ss_pred ---------------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 ---------------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.+...+++++. +.+ .++|. |+ .+.... .....|..+|..++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~ 168 (263)
T PRK06200 96 SLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--GSMIFTLSNSSFYPG-----GGGPLYTASKHAVVGLVR 168 (263)
T ss_pred CcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--CEEEEECChhhcCCC-----CCCchhHHHHHHHHHHHH
Confidence 112344455543 222 34553 32 221111 112357789998887765
Q ss_pred H------cCCCEEEEeccccch
Q 026978 124 A------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~------~gl~~tilr~g~~~~ 139 (230)
. .++....|.||+...
T Consensus 169 ~la~el~~~Irvn~i~PG~i~t 190 (263)
T PRK06200 169 QLAYELAPKIRVNGVAPGGTVT 190 (263)
T ss_pred HHHHHHhcCcEEEEEeCCcccc
Confidence 4 347888888987743
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.07 E-value=7.8e-05 Score=62.25 Aligned_cols=126 Identities=11% Similarity=0.111 Sum_probs=79.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|+++.|+ ... ++ ..+.+. ...+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 22 ia~~l~~~G~~vi~~~r~-~~~---~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~ 95 (272)
T PRK08589 22 SAIALAQEGAYVLAVDIA-EAV---SE--TVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNA 95 (272)
T ss_pred HHHHHHHCCCEEEEEeCc-HHH---HH--HHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCC
Confidence 478899999999999997 321 11 122232 2247889999999988877665 4799999998531
Q ss_pred -------------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+. +.++..+++.+ .++|. |+....... + ....|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~--~--~~~~Y~asKaal~~l~~~la 169 (272)
T PRK08589 96 AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAAD--L--YRSGYNAAKGAVINFTKSIA 169 (272)
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCC--C--CCchHHHHHHHHHHHHHHHH
Confidence 1112 23344454444 46653 332211110 0 123577899888776653
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+..+.|.||+..
T Consensus 170 ~e~~~~gI~v~~v~PG~v~ 188 (272)
T PRK08589 170 IEYGRDGIRANAIAPGTIE 188 (272)
T ss_pred HHhhhcCeEEEEEecCccc
Confidence 57999999999864
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0001 Score=60.89 Aligned_cols=128 Identities=13% Similarity=0.169 Sum_probs=79.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|.++.|+... .+.+ ..+. ...+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~ 96 (259)
T PRK06125 23 AAEAFAAEGCHLHLVARDADA------LEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGG 96 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHH------HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 467899999999999997432 1111 1121 2357889999999998887765 5899999998531
Q ss_pred ----------------hhhHHHHHH----HHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVH----AIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~----Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+...+++ .+++.+ -.++|. |+ .|.. +......|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~~~y~ask~al~~~~~~la~e 170 (259)
T PRK06125 97 LDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN-----PDADYICGSAGNAALMAFTRALGGK 170 (259)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC-----CCCCchHhHHHHHHHHHHHHHHHHH
Confidence 123333344 334444 345653 33 2221 111223455788887666553
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.+..|.||++...
T Consensus 171 ~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 171 SLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred hCccCeEEEEEecCccccH
Confidence 5899999999987643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.7e-05 Score=61.40 Aligned_cols=130 Identities=16% Similarity=0.234 Sum_probs=78.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|+.|.+..|+.... ..+ ....++ ...+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 23 ia~~l~~~G~~vvi~~~~~~~~--~~~--~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~ 98 (261)
T PRK08936 23 MAVRFGKEKAKVVINYRSDEEE--AND--VAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA 98 (261)
T ss_pred HHHHHHHCCCEEEEEeCCCHHH--HHH--HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 4788999999999888854211 001 111222 2346788999999998877765 4799999998631
Q ss_pred ------------------hhh----HHHHHHHHHHhCCc-ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNI-KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~V-kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ ...++..+++.+ . .++|. |+..... +..+...|..+|...+.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS~~~~~----~~~~~~~Y~~sKaa~~~~~~~la 173 (261)
T PRK08936 99 VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSSVHEQI----PWPLFVHYAASKGGVKLMTETLA 173 (261)
T ss_pred CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEccccccC----CCCCCcccHHHHHHHHHHHHHHH
Confidence 111 233455556554 3 45653 3321111 111223567888766654432
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 174 ~e~~~~gi~v~~v~pg~v~t 193 (261)
T PRK08936 174 MEYAPKGIRVNNIGPGAINT 193 (261)
T ss_pred HHHhhcCeEEEEEEECcCCC
Confidence 589999999987653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00011 Score=65.84 Aligned_cols=126 Identities=17% Similarity=0.244 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
+++.|+++|++|++++|+... ++.+.+. ...+.+++.+|++|.+++.++++ ++|+|||+++..
T Consensus 226 la~~l~~~Ga~vi~~~~~~~~----~~l~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~ 299 (450)
T PRK08261 226 IAEVLARDGAHVVCLDVPAAG----EALAAVA--NRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKT 299 (450)
T ss_pred HHHHHHHCCCEEEEEeCCccH----HHHHHHH--HHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence 467889999999999885432 1222111 12356789999999988877665 579999999853
Q ss_pred ---------------ChhhHHHHHHHHHHhCCc----ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAIKVAGNI----KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE----- 123 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~ag~V----kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~----- 123 (230)
++.+..++.+++.... . .+||. |+ .+..... ....|..+|...+.+++
T Consensus 300 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~-~~~~~g~iv~~SS~~~~~g~~-----~~~~Y~asKaal~~~~~~la~e 373 (450)
T PRK08261 300 LANMDEARWDSVLAVNLLAPLRITEALLAAG-ALGDGGRIVGVSSISGIAGNR-----GQTNYAASKAGVIGLVQALAPL 373 (450)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhh-hhcCCCEEEEECChhhcCCCC-----CChHHHHHHHHHHHHHHHHHHH
Confidence 1345677777776643 2 46663 33 2221111 12467788886665543
Q ss_pred --HcCCCEEEEeccccc
Q 026978 124 --AAQIPYTFVSANLCG 138 (230)
Q Consensus 124 --~~gl~~tilr~g~~~ 138 (230)
..|+..+.+.||.+.
T Consensus 374 l~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 374 LAERGITINAVAPGFIE 390 (450)
T ss_pred HhhhCcEEEEEEeCcCc
Confidence 258999999998764
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00014 Score=60.84 Aligned_cols=132 Identities=13% Similarity=0.162 Sum_probs=79.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC--CeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI--GVTIIEGELDEHKKIVSILK------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~--gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~--- 69 (230)
++++|. +|++|.+++|+..... +..+.++.. .+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 17 la~~l~-~G~~Vv~~~r~~~~~~-----~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~~ 90 (275)
T PRK06940 17 IARRVG-AGKKVLLADYNEENLE-----AAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQ 90 (275)
T ss_pred HHHHHh-CCCEEEEEeCCHHHHH-----HHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCch
Confidence 366775 8999999999743210 111223222 46789999999998887775 589999999864
Q ss_pred ---------ChhhHHHHHHHHHH----hCCcceEecccccccCCC--------------C----C----C--C-CchhHH
Q 026978 70 ---------QFLDQLEIVHAIKV----AGNIKRFLPSEFGCEEDK--------------V----R----P--L-PPFEAY 111 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~----ag~Vkr~v~S~~g~~~~~--------------~----~----~--~-~p~~~~ 111 (230)
|+.+..++++++.. .| ..-++.|..|..... . . + . .+...|
T Consensus 91 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 169 (275)
T PRK06940 91 ASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAY 169 (275)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchh
Confidence 23455666666544 34 222333433321100 0 0 0 0 012357
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 112 LEKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 112 ~~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
..+|...+...+. .|+....|.||+...
T Consensus 170 ~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T 204 (275)
T PRK06940 170 QIAKRANALRVMAEAVKWGERGARINSISPGIIST 204 (275)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcC
Confidence 7899887655442 578899999997753
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.7e-05 Score=61.14 Aligned_cols=129 Identities=11% Similarity=0.128 Sum_probs=79.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
+++.|+++|++|++..|+..... +....++ ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 34 ia~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 34 TARRALEEGARVVISDIHERRLG-----ETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHH-----HHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 46889999999999988643210 1111121 1357889999999988887665 579999999853
Q ss_pred C-------------------hhhHHHHHHHHH----HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAIK----VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~----~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+...+++++. +.+.-.++|. |..|.... .+...|..+|..++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~~Y~~sKaal~~~~~~ 183 (262)
T PRK07831 109 GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ-----HGQAHYAAAKAGVMALTRC 183 (262)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----CCCcchHHHHHHHHHHHHH
Confidence 1 223344444443 2220134543 33332111 1223577899988877653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||++..
T Consensus 184 la~e~~~~gI~v~~i~Pg~~~t 205 (262)
T PRK07831 184 SALEAAEYGVRINAVAPSIAMH 205 (262)
T ss_pred HHHHhCccCeEEEEEeeCCccC
Confidence 578999999987754
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00011 Score=60.44 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=77.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhc-------------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILK-------------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------------g~D~Vi~ 64 (230)
++++|+++|++|.+..+.... +.+ ....+. ...+..+.+|++|.+++..+++ ++|+|||
T Consensus 20 ia~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~ 94 (252)
T PRK12747 20 IAKRLANDGALVAIHYGNRKE-----EAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILIN 94 (252)
T ss_pred HHHHHHHCCCeEEEEcCCCHH-----HHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEE
Confidence 478899999999887543211 111 111221 2246678899998776654332 5899999
Q ss_pred cCCCC-------------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 65 TVAYP-------------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 65 ~~~~~-------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
+++.. ++.+...+++++...- ...++|. |+ .+... ......|..+|..++.+.
T Consensus 95 ~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sKaa~~~~~ 169 (252)
T PRK12747 95 NAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----LPDFIAYSMTKGAINTMT 169 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----CCCchhHHHHHHHHHHHH
Confidence 99853 1234455565554431 0236663 33 22211 112236778999988766
Q ss_pred HH-------cCCCEEEEeccccch
Q 026978 123 EA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~ 139 (230)
+. .|+..+.|.||+...
T Consensus 170 ~~la~e~~~~girvn~v~Pg~v~t 193 (252)
T PRK12747 170 FTLAKQLGARGITVNAILPGFIKT 193 (252)
T ss_pred HHHHHHHhHcCCEEEEEecCCccC
Confidence 53 589999999998754
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00021 Score=59.15 Aligned_cols=127 Identities=17% Similarity=0.129 Sum_probs=77.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|+.. +.+.+.......+..+.+|+.|.+++.++++ .+|+|||+++..
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~ 94 (262)
T TIGR03325 21 IVDRFVAEGARVAVLDKSAA------GLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYST 94 (262)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCC
Confidence 47889999999999998642 2222222112347789999999888877665 579999999742
Q ss_pred --------------------ChhhHHHHHHHHHHhC--CcceEe-c-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 --------------------QFLDQLEIVHAIKVAG--NIKRFL-P-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 --------------------~~~~~~~ll~Aa~~ag--~Vkr~v-~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+...+++++...- .-.++| . |..+.... .....|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~~sKaa~~~l~~~l 169 (262)
T TIGR03325 95 ALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----GGGPLYTAAKHAVVGLVKEL 169 (262)
T ss_pred ccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----CCCchhHHHHHHHHHHHHHH
Confidence 0123455666664421 012344 2 33222111 1123577899988877654
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
..+....|.||+..
T Consensus 170 a~e~~~~irvn~i~PG~i~ 188 (262)
T TIGR03325 170 AFELAPYVRVNGVAPGGMS 188 (262)
T ss_pred HHhhccCeEEEEEecCCCc
Confidence 13667777888765
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.4e-05 Score=63.70 Aligned_cols=115 Identities=17% Similarity=0.343 Sum_probs=80.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh----hcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE----FQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~----l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~~---- 70 (230)
|++-||++||+|..+.|.++... ..+.+.|-. -.....++..||++|...|.+.+.-+ +-|+|+++..+
T Consensus 44 LaEfLL~KgYeVHGiiRRsSsFN-T~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvS 122 (376)
T KOG1372|consen 44 LAEFLLSKGYEVHGIIRRSSSFN-TARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVS 122 (376)
T ss_pred HHHHHHhCCceeeEEEeeccccc-hhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEE
Confidence 46789999999999999877643 233332211 11234678999999999999998855 77899988763
Q ss_pred ---------h--hhHHHHHHHHHHhCCcc---eEe-c--cc-ccc----cCCCCCCCCchhHHHHHHHH
Q 026978 71 ---------F--LDQLEIVHAIKVAGNIK---RFL-P--SE-FGC----EEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 71 ---------~--~~~~~ll~Aa~~ag~Vk---r~v-~--S~-~g~----~~~~~~~~~p~~~~~~~K~~ 117 (230)
+ .++.+|++|.+.++ .. ||- . |+ ||- +..+..|+.|.+||..+|.-
T Consensus 123 FdlpeYTAeVdavGtLRlLdAi~~c~-l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy 190 (376)
T KOG1372|consen 123 FDLPEYTAEVDAVGTLRLLDAIRACR-LTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMY 190 (376)
T ss_pred eecccceeeccchhhhhHHHHHHhcC-cccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhh
Confidence 1 37899999999876 42 233 2 33 883 22345677788888888754
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.7e-05 Score=61.77 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=77.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++.|+.. ++.+.+ +.++ ...+.++.+|++|.+++.++++ .+|++||+++..
T Consensus 24 ia~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 24 IVYEFAQSGVNIAFTYNSNV-----EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECcccc
Confidence 47889999999988876432 121111 1221 2357889999999988877665 479999998631
Q ss_pred ---------C-----hh---------------hHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHH
Q 026978 70 ---------Q-----FL---------------DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 70 ---------~-----~~---------------~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
. .+ ..+.++..+++.+ -.++|. |+.+... ..+ ....|..+|..++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~--~~~~Y~asK~a~~ 173 (260)
T PRK08416 99 GRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLV--YIE--NYAGHGTSKAAVE 173 (260)
T ss_pred ccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccccc--CCC--CcccchhhHHHHH
Confidence 0 01 1223344444444 457764 3322111 001 1125668998887
Q ss_pred HHHHH-------cCCCEEEEeccccc
Q 026978 120 RAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~ 138 (230)
.+.+. .|+....|.||+..
T Consensus 174 ~~~~~la~el~~~gi~v~~v~PG~i~ 199 (260)
T PRK08416 174 TMVKYAATELGEKNIRVNAVSGGPID 199 (260)
T ss_pred HHHHHHHHHhhhhCeEEEEEeeCccc
Confidence 76653 58999999998764
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00011 Score=61.02 Aligned_cols=129 Identities=13% Similarity=0.141 Sum_probs=73.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc---CCCeEEEEecCCCHHHHH----HH-------hcCCCEEEEc
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ---GIGVTIIEGELDEHKKIV----SI-------LKEVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~---~~gv~vv~gD~~d~~~L~----~a-------l~g~D~Vi~~ 65 (230)
|+++|+++|++|.++.|.... +.+. .+.+. ...+.++.+|++|.+++. +. +.++|+|||+
T Consensus 17 ~a~~l~~~G~~V~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~n 91 (267)
T TIGR02685 17 IAVALHQEGYRVVLHYHRSAA-----AASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNN 91 (267)
T ss_pred HHHHHHhCCCeEEEEcCCcHH-----HHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEEC
Confidence 578999999999998765321 1111 11221 123557899999987542 22 2368999999
Q ss_pred CCCCC------------------------------hhhHHHHHHHHHHhC---------CcceEec-ccccccCCCCCCC
Q 026978 66 VAYPQ------------------------------FLDQLEIVHAIKVAG---------NIKRFLP-SEFGCEEDKVRPL 105 (230)
Q Consensus 66 ~~~~~------------------------------~~~~~~ll~Aa~~ag---------~Vkr~v~-S~~g~~~~~~~~~ 105 (230)
+|... +.+...+++++.... ...+++. ++.... .+.
T Consensus 92 AG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~----~~~ 167 (267)
T TIGR02685 92 ASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTD----QPL 167 (267)
T ss_pred CccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhcc----CCC
Confidence 98521 012344444443221 0113332 211111 111
Q ss_pred CchhHHHHHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 106 PPFEAYLEKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 106 ~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
.+...|..+|..++.+.+. .|+..+.|+||++.
T Consensus 168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~ 207 (267)
T TIGR02685 168 LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL 207 (267)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence 1234677899998877653 58999999999863
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00023 Score=58.72 Aligned_cols=123 Identities=13% Similarity=0.080 Sum_probs=74.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
++++|+++|++|++++|+.... .+. .. ......+.+|++|.+++.+.+.++|++||++|..
T Consensus 30 la~~l~~~G~~Vi~~~r~~~~~-----~~~--~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~ 101 (245)
T PRK12367 30 LTKAFRAKGAKVIGLTHSKINN-----SES--ND-ESPNEWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENIN 101 (245)
T ss_pred HHHHHHHCCCEEEEEECCchhh-----hhh--hc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHH
Confidence 4688999999999999975211 000 11 1223678899999999999999999999999863
Q ss_pred -----ChhhHHHHHHHHHHh--------CCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHH---H-------HcC
Q 026978 70 -----QFLDQLEIVHAIKVA--------GNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAI---E-------AAQ 126 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~a--------g~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l---~-------~~g 126 (230)
|+.+..++++++... | ...++.|+.+.... + ....|..+|..++.+. + ..+
T Consensus 102 ~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-~~iiv~ss~a~~~~---~--~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~ 175 (245)
T PRK12367 102 KALEINALSSWRLLELFEDIALNNNSQIP-KEIWVNTSEAEIQP---A--LSPSYEISKRLIGQLVSLKKNLLDKNERKK 175 (245)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcccCCC-eEEEEEecccccCC---C--CCchhHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 233455566654432 2 12234333221110 1 1124778888764221 1 256
Q ss_pred CCEEEEecccc
Q 026978 127 IPYTFVSANLC 137 (230)
Q Consensus 127 l~~tilr~g~~ 137 (230)
+..+.+.||++
T Consensus 176 i~v~~~~pg~~ 186 (245)
T PRK12367 176 LIIRKLILGPF 186 (245)
T ss_pred cEEEEecCCCc
Confidence 77777888775
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00014 Score=68.55 Aligned_cols=128 Identities=10% Similarity=0.062 Sum_probs=80.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
+++.|+++|+.|++++|+.... +.+ ..+. ...+..+.+|++|.+++.++++ ++|+|||+++.
T Consensus 430 iA~~La~~Ga~Vvi~~r~~~~~------~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 430 TARRLAAEGAHVVLADLNLEAA------EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred HHHHHHhCCCEEEEEeCCHHHH------HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 4788999999999999975321 111 1121 1246788999999999988877 68999999986
Q ss_pred CC-------------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 69 ~~-------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
.. +.+. +.++..+++.+.-.++|. |+.+.... ......|..+|...+.+.+.
T Consensus 504 ~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~----~~~~~aY~aSKaA~~~l~r~ 579 (676)
T TIGR02632 504 ATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA----GKNASAYSAAKAAEAHLARC 579 (676)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC----CCCCHHHHHHHHHHHHHHHH
Confidence 31 1111 233344445441135654 33221111 01234677999988877653
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+.++.|.||...
T Consensus 580 lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 580 LAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred HHHHhcccCeEEEEEECCcee
Confidence 47888999998764
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00046 Score=56.34 Aligned_cols=127 Identities=13% Similarity=0.159 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|.+.|++|.+..|... +++.++. +....+..+..|++|.+++.++++ .+|++|+.+|..
T Consensus 22 ~A~~l~~~G~~vvl~aRR~d------rL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~ 95 (246)
T COG4221 22 TARALAEAGAKVVLAARREE------RLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGD 95 (246)
T ss_pred HHHHHHHCCCeEEEEeccHH------HHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCC
Confidence 36889999999999999743 4443332 211247889999999988555544 689999999964
Q ss_pred ----------------Chhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHH---HH
Q 026978 70 ----------------QFLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAI---EA 124 (230)
Q Consensus 70 ----------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l---~~ 124 (230)
|+.+ ...++-.+.+.+ -.++|- |+ -|...... ..-|..+|..+..+- |.
T Consensus 96 ~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~-----~~vY~ATK~aV~~fs~~LR~ 169 (246)
T COG4221 96 PLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPG-----GAVYGATKAAVRAFSLGLRQ 169 (246)
T ss_pred hhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCC-----CccchhhHHHHHHHHHHHHH
Confidence 1233 344455555555 346663 33 34322211 124668888777653 32
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.++..|.|.||....
T Consensus 170 e~~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 170 ELAGTGIRVTVISPGLVET 188 (246)
T ss_pred HhcCCCeeEEEecCceecc
Confidence 689999999998854
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00023 Score=58.89 Aligned_cols=129 Identities=13% Similarity=0.180 Sum_probs=77.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|+.|.+++|+.... ++ ....+.. .++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 ia~~l~~~G~~V~~~~r~~~~~---~~--~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~ 90 (259)
T PRK08340 16 VARELLKKGARVVISSRNEENL---EK--ALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCE 90 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHH---HH--HHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 4788999999999999974321 01 1112211 357889999999998887764 6799999998521
Q ss_pred --------h-----------hh----HHHHHHHHH-HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 --------F-----------LD----QLEIVHAIK-VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 --------~-----------~~----~~~ll~Aa~-~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
. .+ ...++..+. +.+ -.++|. |+..... +..+...|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~y~~sKaa~~~~~~~l 165 (259)
T PRK08340 91 PCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKE----PMPPLVLADVTRAGLVQLAKGV 165 (259)
T ss_pred ccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCC----CCCCchHHHHHHHHHHHHHHHH
Confidence 0 00 112233333 233 356664 3322111 111233566889888776653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++..
T Consensus 166 a~e~~~~gI~v~~v~pG~v~t 186 (259)
T PRK08340 166 SRTYGGKGIRAYTVLLGSFDT 186 (259)
T ss_pred HHHhCCCCEEEEEeccCcccC
Confidence 478888888987643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00051 Score=56.67 Aligned_cols=129 Identities=12% Similarity=0.160 Sum_probs=78.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+... .+.++++....+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 25 ~a~~la~~G~~Vi~~~r~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 98 (252)
T PRK06079 25 CAQAIKDQGATVIYTYQNDRM------KKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEE 98 (252)
T ss_pred HHHHHHHCCCEEEEecCchHH------HHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEccccccccc
Confidence 478899999999999886211 112233333457889999999988876543 4799999987421
Q ss_pred --------------------hhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 --------------------FLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+...+.+++...- .-.++|. |+.+.... ......|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~~la~e 174 (252)
T PRK06079 99 LGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA----IPNYNVMGIAKAALESSVRYLARD 174 (252)
T ss_pred ccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc----CCcchhhHHHHHHHHHHHHHHHHH
Confidence 122334444443321 0134542 33322111 11123567899888776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 175 l~~~gI~vn~i~PG~v~T 192 (252)
T PRK06079 175 LGKKGIRVNAISAGAVKT 192 (252)
T ss_pred hhhcCcEEEEEecCcccc
Confidence 589999999988743
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.2e-05 Score=64.74 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=63.3
Q ss_pred HHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+..|+++| ++|++.+|+.. |...+......+++..+.|..|.+.|.+++++.|+||++++... ..++++|
T Consensus 17 a~~la~~~d~~V~iAdRs~~------~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~---~~~i~ka 87 (389)
T COG1748 17 AHKLAQNGDGEVTIADRSKE------KCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV---DLTILKA 87 (389)
T ss_pred HHHHHhCCCceEEEEeCCHH------HHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh---hHHHHHH
Confidence 45677778 89999999854 33333333334799999999999999999999999999998743 4589999
Q ss_pred HHHhCCcceEecc
Q 026978 81 IKVAGNIKRFLPS 93 (230)
Q Consensus 81 a~~ag~Vkr~v~S 93 (230)
|.++| |.-+-.|
T Consensus 88 ~i~~g-v~yvDts 99 (389)
T COG1748 88 CIKTG-VDYVDTS 99 (389)
T ss_pred HHHhC-CCEEEcc
Confidence 99999 6543334
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00033 Score=55.12 Aligned_cols=127 Identities=13% Similarity=0.210 Sum_probs=75.4
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~ 70 (230)
+++.|+++|. .|.++.|+.... ++..+.+..++..| ++++.+|++|++++.++++. ++.|||+++...
T Consensus 16 la~~La~~~~~~~il~~r~~~~~--~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 16 LARWLAERGARRLILLGRSGAPS--AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLA 93 (181)
T ss_dssp HHHHHHHTT-SEEEEEESSGGGS--TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE------
T ss_pred HHHHHHHcCCCEEEEeccCCCcc--HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeec
Confidence 4678888874 788999983221 22333455565445 56789999999999999864 478999998641
Q ss_pred -------------------hhhHHHHHHHHHHhCCcceEec-cc----ccccCCCCCCCCchhHHHHHHHHHHH---HHH
Q 026978 71 -------------------FLDQLEIVHAIKVAGNIKRFLP-SE----FGCEEDKVRPLPPFEAYLEKKRIVRR---AIE 123 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~----~g~~~~~~~~~~p~~~~~~~K~~~e~---~l~ 123 (230)
+.+..+|.++..... ++.||. |+ +|... ...|...-.-.+. ..+
T Consensus 94 ~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g--------q~~YaaAN~~lda~a~~~~ 164 (181)
T PF08659_consen 94 DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG--------QSAYAAANAFLDALARQRR 164 (181)
T ss_dssp -B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT--------BHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc--------hHhHHHHHHHHHHHHHHHH
Confidence 346778888887777 888774 43 44321 1234333333332 334
Q ss_pred HcCCCEEEEeccccc
Q 026978 124 AAQIPYTFVSANLCG 138 (230)
Q Consensus 124 ~~gl~~tilr~g~~~ 138 (230)
..|++++.|.-|.|-
T Consensus 165 ~~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 165 SRGLPAVSINWGAWD 179 (181)
T ss_dssp HTTSEEEEEEE-EBS
T ss_pred hCCCCEEEEEccccC
Confidence 578999998876654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00024 Score=60.54 Aligned_cols=127 Identities=11% Similarity=0.141 Sum_probs=77.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|+.|++.+|..... .+ +....+.. ..+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 28 ia~~L~~~Ga~Vv~~~~~~~~~--~~--~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~ 103 (306)
T PRK07792 28 EALGLARLGATVVVNDVASALD--AS--DVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDR 103 (306)
T ss_pred HHHHHHHCCCEEEEecCCchhH--HH--HHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4788999999999988753211 00 11122322 347789999999988887765 5799999998631
Q ss_pred -----------------hhhHHHHHHHHHHh--------C-C-cceEec-c-cccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 71 -----------------FLDQLEIVHAIKVA--------G-N-IKRFLP-S-EFGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~a--------g-~-Vkr~v~-S-~~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
+.+..++++++... + . -.++|. | ..+.... + ....|..+|..++.+
T Consensus 104 ~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~--~~~~Y~asKaal~~l 178 (306)
T PRK07792 104 MLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---V--GQANYGAAKAGITAL 178 (306)
T ss_pred CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC---C--CCchHHHHHHHHHHH
Confidence 23455666665321 0 0 125553 3 2222111 0 123577899888776
Q ss_pred HHH-------cCCCEEEEeccc
Q 026978 122 IEA-------AQIPYTFVSANL 136 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~ 136 (230)
.+. .|+....|.||.
T Consensus 179 ~~~la~e~~~~gI~vn~i~Pg~ 200 (306)
T PRK07792 179 TLSAARALGRYGVRANAICPRA 200 (306)
T ss_pred HHHHHHHhhhcCeEEEEECCCC
Confidence 542 578888888874
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0001 Score=57.89 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=61.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCCh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~~ 71 (230)
++++|+++|++|++++|+.. +.+.+.. +. ...+..+.+|++|.+++.++++ +.|.+|+.+..
T Consensus 15 la~~L~~~G~~V~v~~R~~~------~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~--- 85 (177)
T PRK08309 15 VSLWLCEKGFHVSVIARREV------KLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHS--- 85 (177)
T ss_pred HHHHHHHCcCEEEEEECCHH------HHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccc---
Confidence 47889999999999999742 2222211 21 2357888999999999888776 35788877644
Q ss_pred hhHHHHHHHHHHhCCcc----eEec
Q 026978 72 LDQLEIVHAIKVAGNIK----RFLP 92 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vk----r~v~ 92 (230)
.+..++..+|++.| |+ ||+.
T Consensus 86 ~~~~~~~~~~~~~g-v~~~~~~~~h 109 (177)
T PRK08309 86 SAKDALSVVCRELD-GSSETYRLFH 109 (177)
T ss_pred cchhhHHHHHHHHc-cCCCCceEEE
Confidence 57889999999999 99 8874
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00022 Score=60.95 Aligned_cols=134 Identities=11% Similarity=0.160 Sum_probs=77.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|+.|+++.|+..... +-.+.+... ....+.++.+|+.|.+++.++++ .+|++||+++...
T Consensus 30 ~a~~La~~G~~Vil~~R~~~~~~--~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~ 107 (313)
T PRK05854 30 LARRLAAAGAEVILPVRNRAKGE--AAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPP 107 (313)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCC
Confidence 47889999999999999754211 001111111 11357889999999998887654 4799999998531
Q ss_pred ----------------hhhHHH----HHHHHHHhCCcceEec-cc----ccc-cCC---CCCCCCchhHHHHHHHHHHHH
Q 026978 71 ----------------FLDQLE----IVHAIKVAGNIKRFLP-SE----FGC-EED---KVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 71 ----------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~----~g~-~~~---~~~~~~p~~~~~~~K~~~e~~ 121 (230)
+.+... ++...++.. .|+|. |+ ++. +.+ ......+...|..+|.....+
T Consensus 108 ~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~--~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 185 (313)
T PRK05854 108 ERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR--ARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLF 185 (313)
T ss_pred ccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC--CCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHH
Confidence 122333 333333332 45553 32 121 000 011122334577899887654
Q ss_pred HHH---------cCCCEEEEeccccc
Q 026978 122 IEA---------AQIPYTFVSANLCG 138 (230)
Q Consensus 122 l~~---------~gl~~tilr~g~~~ 138 (230)
.++ .|+....+.||+..
T Consensus 186 ~~~la~~~~~~~~gI~v~~v~PG~v~ 211 (313)
T PRK05854 186 ALELDRRSRAAGWGITSNLAHPGVAP 211 (313)
T ss_pred HHHHHHHhhcCCCCeEEEEEecceec
Confidence 432 36788888898764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00029 Score=57.44 Aligned_cols=132 Identities=11% Similarity=0.081 Sum_probs=76.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC--HHHHHHH-------h-cCCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE--HKKIVSI-------L-KEVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d--~~~L~~a-------l-~g~D~Vi~~~~~~- 69 (230)
|++.|+++|++|++++|+..... +-.+.+.......+.++.+|+.| .+++.++ + ..+|+|||+++..
T Consensus 22 la~~l~~~g~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~ 99 (239)
T PRK08703 22 VAKAYAAAGATVILVARHQKKLE--KVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFY 99 (239)
T ss_pred HHHHHHHcCCEEEEEeCChHHHH--HHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccc
Confidence 47889999999999999853210 00011111111246678899875 3344433 2 4579999999852
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ -.+++. |..+... ......|..+|..++.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~-----~~~~~~Y~~sKaa~~~~~~~ 173 (239)
T PRK08703 100 ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETP-----KAYWGGFGASKAALNYLCKV 173 (239)
T ss_pred cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccC-----CCCccchHHhHHHHHHHHHH
Confidence 122344455554 3344 456663 3233211 11123577899988877653
Q ss_pred -------c-CCCEEEEeccccchh
Q 026978 125 -------A-QIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~-gl~~tilr~g~~~~~ 140 (230)
. ++..+.|+||++...
T Consensus 174 la~e~~~~~~i~v~~v~pG~v~t~ 197 (239)
T PRK08703 174 AADEWERFGNLRANVLVPGPINSP 197 (239)
T ss_pred HHHHhccCCCeEEEEEecCcccCc
Confidence 2 588888899987653
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00017 Score=58.97 Aligned_cols=129 Identities=12% Similarity=0.093 Sum_probs=76.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|+.|++++|+..... +....+. ...+.++.+|++|.+++.++++ +.|+|||+++...
T Consensus 21 ~a~~l~~~G~~vi~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 95 (253)
T PRK08217 21 MAEYLAQKGAKLALIDLNQEKLE-----EAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRD 95 (253)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCc
Confidence 46789999999999998753210 0111121 2346789999999888776555 3699999987421
Q ss_pred ---------------------------hhhHH----HHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHH
Q 026978 71 ---------------------------FLDQL----EIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 71 ---------------------------~~~~~----~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
+.+.. .++....+.+.-.+++. |+.+... . .+...|..+|...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~---~--~~~~~Y~~sK~a~ 170 (253)
T PRK08217 96 GLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG---N--MGQTNYSASKAGV 170 (253)
T ss_pred CcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC---C--CCCchhHHHHHHH
Confidence 11222 22233333320134553 3322110 0 1223577899888
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+++. .++..+.++||++..
T Consensus 171 ~~l~~~la~~~~~~~i~v~~v~pg~v~t 198 (253)
T PRK08217 171 AAMTVTWAKELARYGIRVAAIAPGVIET 198 (253)
T ss_pred HHHHHHHHHHHHHcCcEEEEEeeCCCcC
Confidence 766543 589999999998754
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00013 Score=64.12 Aligned_cols=80 Identities=20% Similarity=0.255 Sum_probs=59.2
Q ss_pred HHHHhhCC-C-eEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHH
Q 026978 2 VKASVSSG-H-KTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 2 v~~Ll~~g-~-~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
++.|++++ + +|++.+|+. +|++.+.. +...+++.+..|++|.++|.++++++|+||+|++.. ....++
T Consensus 14 ~~~L~~~~~~~~v~va~r~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~---~~~~v~ 84 (386)
T PF03435_consen 14 ARLLARRGPFEEVTVADRNP------EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF---FGEPVA 84 (386)
T ss_dssp HHHHHCTTCE-EEEEEESSH------HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG---GHHHHH
T ss_pred HHHHhcCCCCCcEEEEECCH------HHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc---hhHHHH
Confidence 56677766 4 899999984 34433322 134689999999999999999999999999999876 567899
Q ss_pred HHHHHhCCcceEec
Q 026978 79 HAIKVAGNIKRFLP 92 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~ 92 (230)
++|.++| + ++|-
T Consensus 85 ~~~i~~g-~-~yvD 96 (386)
T PF03435_consen 85 RACIEAG-V-HYVD 96 (386)
T ss_dssp HHHHHHT---EEEE
T ss_pred HHHHHhC-C-Ceec
Confidence 9999999 4 5664
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=60.82 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=62.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|+++|+++||+|.+.+|+..+.. .+...|..-+..+..|.++|.+.++ ++|+||+++++.......|+.
T Consensus 15 la~~L~~~g~~v~~s~~t~~~~~---------~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~ 85 (256)
T TIGR00715 15 IAKGLIAQGIEILVTVTTSEGKH---------LYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQITTNAT 85 (256)
T ss_pred HHHHHHhCCCeEEEEEccCCccc---------cccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHH
Confidence 46789999999999999876532 1223344444455567788988887 589999999998888899999
Q ss_pred HHHHHhCCcceEe
Q 026978 79 HAIKVAGNIKRFL 91 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v 91 (230)
+||++.| +..+=
T Consensus 86 ~a~~~~~-ipylR 97 (256)
T TIGR00715 86 AVCKELG-IPYVR 97 (256)
T ss_pred HHHHHhC-CcEEE
Confidence 9999999 87543
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00056 Score=62.36 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=77.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
+++.|+++|++|.++.|+..... +..+.+ ...+..+.+|++|++++.++++ ++|+|||+++..
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~ 94 (520)
T PRK06484 21 ACQRFARAGDQVVVADRNVERAR-----ERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTM 94 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH-----HHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCC
Confidence 47889999999999999743210 111122 2356779999999998877664 479999998751
Q ss_pred -----------------ChhhHHHHHHHHH----HhCCcc-eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -----------------QFLDQLEIVHAIK----VAGNIK-RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~----~ag~Vk-r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+...+++++. +.+ -. ++|. |+ .+..... ....|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~iv~isS~~~~~~~~-----~~~~Y~asKaal~~l~~~l 168 (520)
T PRK06484 95 TATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAIVNVASGAGLVALP-----KRTAYSASKAAVISLTRSL 168 (520)
T ss_pred cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeEEEECCcccCCCCC-----CCchHHHHHHHHHHHHHHH
Confidence 1223344444443 333 22 6653 33 2221111 123577889888776543
Q ss_pred ------cCCCEEEEecccc
Q 026978 125 ------AQIPYTFVSANLC 137 (230)
Q Consensus 125 ------~gl~~tilr~g~~ 137 (230)
.++..+.|.||++
T Consensus 169 a~e~~~~~i~v~~i~Pg~v 187 (520)
T PRK06484 169 ACEWAAKGIRVNAVLPGYV 187 (520)
T ss_pred HHHhhhhCeEEEEEccCCc
Confidence 5799999999865
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00073 Score=55.98 Aligned_cols=129 Identities=10% Similarity=0.172 Sum_probs=76.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|.+..|+..... ..+.++++.. ..+.++.+|++|.+++.++++ .+|++||+++..
T Consensus 24 ia~~la~~G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~ 100 (258)
T PRK07370 24 IAQQLHAAGAELGITYLPDEKGR---FEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGK 100 (258)
T ss_pred HHHHHHHCCCEEEEEecCcccch---HHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCc
Confidence 47889999999988776543211 0112223322 236688999999998877654 579999999842
Q ss_pred -----C----------------hhhHHHHHHH----HHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 -----Q----------------FLDQLEIVHA----IKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 -----~----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
. +.+...+.++ +++. .++|. |+.+... +......|..+|..++.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~---g~Iv~isS~~~~~----~~~~~~~Y~asKaal~~l~~ 173 (258)
T PRK07370 101 EELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG---GSIVTLTYLGGVR----AIPNYNVMGVAKAALEASVR 173 (258)
T ss_pred ccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC---CeEEEEecccccc----CCcccchhhHHHHHHHHHHH
Confidence 1 1223333333 3332 35553 3332211 11112356789988877665
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+....|.||++..
T Consensus 174 ~la~el~~~gI~Vn~i~PG~v~T 196 (258)
T PRK07370 174 YLAAELGPKNIRVNAISAGPIRT 196 (258)
T ss_pred HHHHHhCcCCeEEEEEecCcccC
Confidence 3 578899999998753
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0013 Score=54.33 Aligned_cols=133 Identities=12% Similarity=0.144 Sum_probs=77.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCC-----CCcchH-hhhhhhcCC--CeEEEEecCCCHHHHHHHhc-------CCCEEEEc
Q 026978 1 MVKASVSSGHKTFVYARPVTQN-----SRPSKL-EIHKEFQGI--GVTIIEGELDEHKKIVSILK-------EVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~-----~~p~k~-~~l~~l~~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~ 65 (230)
++++|+++|++|.+..|..... ...++. +..+.++.. .+.++.+|++|.+++.++++ ..|+|||+
T Consensus 24 ~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ 103 (256)
T PRK12859 24 ICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNN 103 (256)
T ss_pred HHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 4788999999998875432110 000111 111122222 36678999999998887765 36999999
Q ss_pred CCCCC-------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 66 VAYPQ-------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 66 ~~~~~-------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
++... +.+ .+.++..+++.+ -.++|. |+ .+.. +..+...|..+|..++.
T Consensus 104 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~~sK~a~~~ 177 (256)
T PRK12859 104 AAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG-----PMVGELAYAATKGAIDA 177 (256)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC-----CCCCchHHHHHHHHHHH
Confidence 98531 112 233445555544 357764 33 2211 11122357788888776
Q ss_pred HHHH-------cCCCEEEEeccccch
Q 026978 121 AIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+. .++..+.|+||++..
T Consensus 178 l~~~la~~~~~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 178 LTSSLAAEVAHLGITVNAINPGPTDT 203 (256)
T ss_pred HHHHHHHHhhhhCeEEEEEEEccccC
Confidence 5443 579999999998753
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00069 Score=54.91 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=75.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~------- 69 (230)
+++.|+++|++|+++.|+.. +.+.+. +..+++++.+|++|.+++.++++ .+|++||+++..
T Consensus 16 ia~~l~~~g~~v~~~~r~~~------~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~ 87 (223)
T PRK05884 16 IAEGFRNDGHKVTLVGARRD------DLEVAA--KELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPR 87 (223)
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHH--HhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCc
Confidence 46789999999999999742 222111 12357889999999999888775 589999997631
Q ss_pred -----------------ChhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 -----------------QFLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
|+.+...+++++... . -.++|. |+... + ....|..+|...+.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~g~Iv~isS~~~------~--~~~~Y~asKaal~~~~~~la~e~ 158 (223)
T PRK05884 88 TYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-GGSIISVVPENP------P--AGSAEAAIKAALSNWTAGQAAVF 158 (223)
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEEEEecCCC------C--CccccHHHHHHHHHHHHHHHHHh
Confidence 011233344443321 1 135553 32210 0 123567889887766543
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 159 ~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 159 GTRGITINAVACGRSV 174 (223)
T ss_pred hhcCeEEEEEecCccC
Confidence 57888899998764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0014 Score=54.20 Aligned_cols=131 Identities=9% Similarity=0.073 Sum_probs=77.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+... .++.+.+. .+....+..+.+|++|.+++.++++ .+|++||+++...
T Consensus 25 ia~~la~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~ 101 (257)
T PRK08594 25 IARSLHNAGAKLVFTYAGERL---EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKE 101 (257)
T ss_pred HHHHHHHCCCEEEEecCcccc---hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCC
Confidence 478899999999998876321 12222221 2222357789999999998877664 4799999987421
Q ss_pred ---------------------hhhHHHHHHHHHHhC-CcceEec-c-cccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ---------------------FLDQLEIVHAIKVAG-NIKRFLP-S-EFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S-~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+...+++++...= .-.++|. | ..|.... + ....|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~l~~~la 176 (257)
T PRK08594 102 DLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV---Q--NYNVMGVAKASLEASVKYLA 176 (257)
T ss_pred cCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC---C--CCchhHHHHHHHHHHHHHHH
Confidence 012223334433211 0135553 3 3332111 1 123567899888776553
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 177 ~el~~~gIrvn~v~PG~v~T 196 (257)
T PRK08594 177 NDLGKDGIRVNAISAGPIRT 196 (257)
T ss_pred HHhhhcCCEEeeeecCcccC
Confidence 579999999988753
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.002 Score=57.18 Aligned_cols=124 Identities=14% Similarity=0.177 Sum_probs=75.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
++++|+++|++|++++|+.... .+.... ...+++.+.+|++|.+++.+.+.++|++||++|..
T Consensus 194 LA~~La~~G~~Vi~l~r~~~~l-----~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~ 267 (406)
T PRK07424 194 LLKELHQQGAKVVALTSNSDKI-----TLEING-EDLPVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAIN 267 (406)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH-----HHHHhh-cCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHH
Confidence 4678999999999999864311 011111 12346788999999999999999999999998753
Q ss_pred -----ChhhHHHHHHHHH----HhCC-c-ce-Eec-ccccccCCCCCCCCch-hHHHHHHHHHHHHH--HH--cCCCEEE
Q 026978 70 -----QFLDQLEIVHAIK----VAGN-I-KR-FLP-SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAI--EA--AQIPYTF 131 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~----~ag~-V-kr-~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l--~~--~gl~~ti 131 (230)
|+.+..++++++. +.+. . +. +|. |+.+. .+ +. ..|..+|..+..+. +. .++....
T Consensus 268 ~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-----~~--~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~ 340 (406)
T PRK07424 268 KSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-----NP--AFSPLYELSKRALGDLVTLRRLDAPCVVRK 340 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-----cC--CCchHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 2335566666653 3320 1 12 333 32111 11 22 24778998887743 22 3444555
Q ss_pred Eecccc
Q 026978 132 VSANLC 137 (230)
Q Consensus 132 lr~g~~ 137 (230)
+.+|++
T Consensus 341 i~~gp~ 346 (406)
T PRK07424 341 LILGPF 346 (406)
T ss_pred EEeCCC
Confidence 556554
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00076 Score=56.62 Aligned_cols=130 Identities=15% Similarity=0.192 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchH-hhhhhhcCC-CeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKL-EIHKEFQGI-GVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~-~~l~~l~~~-gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~~- 70 (230)
++.+|.++|..+..++|..... ++. +.++.+-.. .+.++++|++|.++..+++ .++|++|+.+|...
T Consensus 28 lA~~la~~G~~l~lvar~~rrl---~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~ 104 (282)
T KOG1205|consen 28 LAYELAKRGAKLVLVARRARRL---ERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLV 104 (282)
T ss_pred HHHHHHhCCCceEEeehhhhhH---HHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccc
Confidence 4678999999988888875432 233 333332233 4899999999999998664 38899999999751
Q ss_pred ----------------------hhhHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchh-HHHHHHHHHHHHHHH-
Q 026978 71 ----------------------FLDQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFE-AYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ----------------------~~~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~-~~~~~K~~~e~~l~~- 124 (230)
+.-++.++.-+++.+ =.|+|. |.-|.... |.. -|..+|.+.+.+.+.
T Consensus 105 ~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~------P~~~~Y~ASK~Al~~f~etL 177 (282)
T KOG1205|consen 105 GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPL------PFRSIYSASKHALEGFFETL 177 (282)
T ss_pred cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCC------CcccccchHHHHHHHHHHHH
Confidence 123555566666664 356653 54554221 222 456899888766543
Q ss_pred ----cCCCE-E--EEeccccchh
Q 026978 125 ----AQIPY-T--FVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~-t--ilr~g~~~~~ 140 (230)
.+... + .|.||+.--.
T Consensus 178 R~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 178 RQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred HHHhhccCceEEEEEecCceeec
Confidence 22221 2 3778877543
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0017 Score=52.81 Aligned_cols=129 Identities=8% Similarity=0.003 Sum_probs=75.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.++.|+.+... +..+.++.. ...+..+.+|+.|.+++.++++ .+|++||+++...
T Consensus 21 ia~~la~~G~~V~~~~r~~~~l~--~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~ 97 (227)
T PRK08862 21 ISCHFARLGATLILCDQDQSALK--DTYEQCSAL-TDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLP 97 (227)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHH--HHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCC
Confidence 46889999999999999754221 001111111 2245677889999998876653 5899999997320
Q ss_pred -------h-----------hhHHH----HHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -------F-----------LDQLE----IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -------~-----------~~~~~----ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
. ..... ++...++.+.-.++|. |+.... + +...|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----~--~~~~Y~asKaal~~~~~~la~ 170 (227)
T PRK08862 98 SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----Q--DLTGVESSNALVSGFTHSWAK 170 (227)
T ss_pred CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----C--CcchhHHHHHHHHHHHHHHHH
Confidence 0 11112 2233333321134543 332211 1 123567888887766543
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.++....|.||++..
T Consensus 171 el~~~~Irvn~v~PG~i~t 189 (227)
T PRK08862 171 ELTPFNIRVGGVVPSIFSA 189 (227)
T ss_pred HHhhcCcEEEEEecCcCcC
Confidence 578899999998754
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0024 Score=50.57 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=73.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
+++.|+++ ++|.+++|+.. .+.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~ 74 (199)
T PRK07578 16 VVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEM 74 (199)
T ss_pred HHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhC
Confidence 46778888 89999988521 35789999999888877 6799999998531
Q ss_pred ------------hhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------cCCC
Q 026978 71 ------------FLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------AQIP 128 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------~gl~ 128 (230)
+.+..++++++... + -.+++. |+ .+... ......|..+|..++.+.+. .|+.
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~ 148 (199)
T PRK07578 75 TDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSDEP-----IPGGASAATVNGALEGFVKAAALELPRGIR 148 (199)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccCCC-----CCCchHHHHHHHHHHHHHHHHHHHccCCeE
Confidence 22445667766542 2 234553 32 33211 11223577888887766543 4788
Q ss_pred EEEEeccccch
Q 026978 129 YTFVSANLCGA 139 (230)
Q Consensus 129 ~tilr~g~~~~ 139 (230)
...|.||++-.
T Consensus 149 v~~i~Pg~v~t 159 (199)
T PRK07578 149 INVVSPTVLTE 159 (199)
T ss_pred EEEEcCCcccC
Confidence 88889987643
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0016 Score=53.74 Aligned_cols=128 Identities=13% Similarity=0.166 Sum_probs=74.3
Q ss_pred HHHHhh----CCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhcC-----------CCEE
Q 026978 2 VKASVS----SGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILKE-----------VDVV 62 (230)
Q Consensus 2 v~~Ll~----~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~g-----------~D~V 62 (230)
+++|++ .|++|.++.|+..... . ..+.++ ...+.++.+|++|.+++.++++. .|+|
T Consensus 17 a~~la~~~~~~g~~V~~~~r~~~~~~---~--~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~l 91 (256)
T TIGR01500 17 AQELAKCLKSPGSVLVLSARNDEALR---Q--LKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLL 91 (256)
T ss_pred HHHHHHhhccCCcEEEEEEcCHHHHH---H--HHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEE
Confidence 566775 7999999999753211 1 111222 22478899999999988776642 2589
Q ss_pred EEcCCCCC----------------------hhhH----HHHHHHHHHh-CCcceEec-ccccccCCCCCCCCchhHHHHH
Q 026978 63 ISTVAYPQ----------------------FLDQ----LEIVHAIKVA-GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEK 114 (230)
Q Consensus 63 i~~~~~~~----------------------~~~~----~~ll~Aa~~a-g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~ 114 (230)
||+++... +.+. +.++.+.++. |.-.++|. |+.+... +......|..+
T Consensus 92 v~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~as 167 (256)
T TIGR01500 92 INNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----PFKGWALYCAG 167 (256)
T ss_pred EeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----CCCCchHHHHH
Confidence 99987420 1122 2334444443 21135653 4322111 11112357789
Q ss_pred HHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 115 KRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 115 K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
|...+.+.+. .|+....+.||++.
T Consensus 168 Kaal~~l~~~la~e~~~~~i~v~~v~PG~v~ 198 (256)
T TIGR01500 168 KAARDMLFQVLALEEKNPNVRVLNYAPGVLD 198 (256)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Confidence 9888776653 46888888898774
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0015 Score=56.10 Aligned_cols=128 Identities=13% Similarity=0.137 Sum_probs=76.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCC--HH---HHHHHhcC--CCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDE--HK---KIVSILKE--VDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d--~~---~L~~al~g--~D~Vi~~~~~ 68 (230)
++++|+++|++|.+++|+.. +.+.+ ++++ ...+..+.+|+++ .+ .+.+.+.+ +|++||++|.
T Consensus 69 lA~~La~~G~~Vil~~R~~~------~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~ 142 (320)
T PLN02780 69 FAFQLARKGLNLVLVARNPD------KLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGV 142 (320)
T ss_pred HHHHHHHCCCCEEEEECCHH------HHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCc
Confidence 46889999999999999753 22221 1221 1246678889974 33 34445555 4599999875
Q ss_pred C---------------------ChhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCc-hhHHHHHHHHHHH
Q 026978 69 P---------------------QFLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPP-FEAYLEKKRIVRR 120 (230)
Q Consensus 69 ~---------------------~~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p-~~~~~~~K~~~e~ 120 (230)
. |+.+...+.++ +++.+ -.++|. |+ .|.... ..| ...|..+|..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~----~~p~~~~Y~aSKaal~~ 217 (320)
T PLN02780 143 SYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIP----SDPLYAVYAATKAYIDQ 217 (320)
T ss_pred CCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC----CCccchHHHHHHHHHHH
Confidence 2 11233444444 44555 567764 33 332100 012 2357789988876
Q ss_pred HHHH-------cCCCEEEEeccccch
Q 026978 121 AIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+. .|+..+.+.||+...
T Consensus 218 ~~~~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 218 FSRCLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred HHHHHHHHHhccCeEEEEEeeCceec
Confidence 5543 589999999988643
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0018 Score=52.95 Aligned_cols=127 Identities=15% Similarity=0.302 Sum_probs=79.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHH-------h-cCCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSI-------L-KEVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~a-------l-~g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|++..|+.... .+.+..+ +..+.+++.+|++|.+++.++ + ..+|++||+++...
T Consensus 12 ia~~l~~~Ga~V~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 12 IARALAEEGANVILTDRNEEKL-----ADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPP 86 (241)
T ss_dssp HHHHHHHTTEEEEEEESSHHHH-----HHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTG
T ss_pred HHHHHHHCCCEEEEEeCChHHH-----HHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccccc
Confidence 4789999999999999985421 1112222 234677899999999988776 4 46799999986531
Q ss_pred ----------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 ----------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 ----------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.+...+++++ ++.| ++|. |+.+.... . .....|..+|..++.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---sii~iss~~~~~~--~--~~~~~y~~sKaal~~l~r 159 (241)
T PF13561_consen 87 SNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG---SIINISSIAAQRP--M--PGYSAYSASKAALEGLTR 159 (241)
T ss_dssp GGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE---EEEEEEEGGGTSB--S--TTTHHHHHHHHHHHHHHH
T ss_pred ccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---Ccccccchhhccc--C--ccchhhHHHHHHHHHHHH
Confidence 11223333333 3333 4442 32222111 1 112356688988887665
Q ss_pred H--------cCCCEEEEeccccch
Q 026978 124 A--------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~--------~gl~~tilr~g~~~~ 139 (230)
. .|+....|.||++..
T Consensus 160 ~lA~el~~~~gIrVN~V~pG~i~t 183 (241)
T PF13561_consen 160 SLAKELAPKKGIRVNAVSPGPIET 183 (241)
T ss_dssp HHHHHHGGHGTEEEEEEEESSBSS
T ss_pred HHHHHhccccCeeeeeecccceec
Confidence 3 589999999998874
|
... |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0037 Score=52.35 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=75.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|+.|.+..|+... .++.+.+ +.+ ... ..+.+|++|.+++.++++ .+|++||+++..
T Consensus 23 iA~~la~~G~~Vil~~r~~~~---~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~ 97 (274)
T PRK08415 23 IAKACFEQGAELAFTYLNEAL---KKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKE 97 (274)
T ss_pred HHHHHHHCCCEEEEEecCHHH---HHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccc
Confidence 468899999999998887321 1122222 112 112 578999999998877654 569999999852
Q ss_pred --------------------ChhhHHHHHHHHHHh-CCcceEec-ccccccCCCCCCCCch-hHHHHHHHHHHHHHHH--
Q 026978 70 --------------------QFLDQLEIVHAIKVA-GNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 --------------------~~~~~~~ll~Aa~~a-g~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~-- 124 (230)
|+.+...+.+++... ..-.++|. |+.+.... .|. ..|..+|..+..+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaal~~l~~~la 172 (274)
T PRK08415 98 ALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-----VPHYNVMGVAKAALESSVRYLA 172 (274)
T ss_pred ccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----CCcchhhhhHHHHHHHHHHHHH
Confidence 012223333333221 00024553 43332111 122 3566899887765543
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 173 ~el~~~gIrVn~v~PG~v~T 192 (274)
T PRK08415 173 VDLGKKGIRVNAISAGPIKT 192 (274)
T ss_pred HHhhhcCeEEEEEecCcccc
Confidence 578889999997643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0032 Score=52.67 Aligned_cols=129 Identities=12% Similarity=0.153 Sum_probs=77.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|.+..|+... .++.+.+.. +...+..+.+|++|.+++.++++ .+|++||+++...
T Consensus 28 ia~~la~~G~~V~l~~r~~~~---~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~ 103 (272)
T PRK08159 28 IAKACRAAGAELAFTYQGDAL---KKRVEPLAA-ELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDE 103 (272)
T ss_pred HHHHHHHCCCEEEEEcCchHH---HHHHHHHHH-hcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccc
Confidence 478899999999887775211 112222211 01235578999999998887654 4799999997420
Q ss_pred --------------------hhhHHHHHHHHHHh--CCcceEe-cccccccCCCCCCCCch-hHHHHHHHHHHHHHHH--
Q 026978 71 --------------------FLDQLEIVHAIKVA--GNIKRFL-PSEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~a--g~Vkr~v-~S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~-- 124 (230)
+.+...+++++... + -.++| .|+.+... . .|. ..|..+|...+.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~iss~~~~~--~---~p~~~~Y~asKaal~~l~~~la 177 (272)
T PRK08159 104 LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-GGSILTLTYYGAEK--V---MPHYNVMGVAKAALEASVKYLA 177 (272)
T ss_pred cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CceEEEEecccccc--C---CCcchhhhhHHHHHHHHHHHHH
Confidence 12344555554432 1 13444 24433221 1 122 3466899888766653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 178 ~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 178 VDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred HHhcccCeEEEEeecCCcCC
Confidence 578889999998753
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0029 Score=52.00 Aligned_cols=127 Identities=9% Similarity=0.128 Sum_probs=74.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCC---CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGI---GVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~---gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|. +|+.|.++.|+... ++.+ +.++.. .+.++.+|+.|.+++.++++ .+|++||+++..
T Consensus 16 ia~~l~-~g~~Vil~~r~~~~------~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~ 88 (246)
T PRK05599 16 IATLLC-HGEDVVLAARRPEA------AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGIL 88 (246)
T ss_pred HHHHHh-CCCEEEEEeCCHHH------HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcC
Confidence 366777 69999999997432 2211 123222 37789999999888876643 579999999863
Q ss_pred C-------------------hhhHHH----HHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLE----IVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~----ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+... ++...++.+.-.++|. |..|..... ....|..+|..++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-----~~~~Y~asKaa~~~~~~~ 163 (246)
T PRK05599 89 GDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR-----ANYVYGSTKAGLDAFCQG 163 (246)
T ss_pred CCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-----CCcchhhHHHHHHHHHHH
Confidence 1 011222 2233433320135553 334432111 122466888877665542
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....+.||+...
T Consensus 164 la~el~~~~I~v~~v~PG~v~T 185 (246)
T PRK05599 164 LADSLHGSHVRLIIARPGFVIG 185 (246)
T ss_pred HHHHhcCCCceEEEecCCcccc
Confidence 578888888987753
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0027 Score=51.49 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=72.5
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH---hcCCCEEEEcCCCCC-----
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI---LKEVDVVISTVAYPQ----- 70 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a---l~g~D~Vi~~~~~~~----- 70 (230)
++++|+++| +.|.+..|+... .+....+.++++|++|.+++.++ +.++|+|||++|...
T Consensus 16 ia~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~ 84 (235)
T PRK09009 16 MVKQLLERYPDATVHATYRHHKP-----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKG 84 (235)
T ss_pred HHHHHHHhCCCCEEEEEccCCcc-----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccC
Confidence 467888886 555555564321 12235678899999998886664 457899999998641
Q ss_pred --------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+ .+.++..+++.+ ..+++. |..|...... ..+...|..+|..++.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~--~~~~~~Y~asK~a~~~~~~~ 161 (235)
T PRK09009 85 PEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNR--LGGWYSYRASKAALNMFLKT 161 (235)
T ss_pred cccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCC--CCCcchhhhhHHHHHHHHHH
Confidence 011 223334444444 456542 3344221111 11223567899888877653
Q ss_pred ---------cCCCEEEEeccccc
Q 026978 125 ---------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---------~gl~~tilr~g~~~ 138 (230)
.++....+.||+..
T Consensus 162 la~e~~~~~~~i~v~~v~PG~v~ 184 (235)
T PRK09009 162 LSIEWQRSLKHGVVLALHPGTTD 184 (235)
T ss_pred HHHHhhcccCCeEEEEEccccee
Confidence 25666677787754
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0037 Score=51.87 Aligned_cols=130 Identities=11% Similarity=0.112 Sum_probs=74.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|.... .++++.+.. .......+.+|++|.+++.++++ ++|++||+++...
T Consensus 24 ~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~ 99 (261)
T PRK08690 24 IAKACREQGAELAFTYVVDKL---EERVRKMAA-ELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEA 99 (261)
T ss_pred HHHHHHHCCCEEEEEcCcHHH---HHHHHHHHh-ccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccc
Confidence 478899999999887765211 122222211 01234578999999998887654 5799999997531
Q ss_pred -----h----------------hhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -----F----------------LDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -----~----------------~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+ .+...+.+++.. .+ -.++|. |+.+.... .+ ....|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~--~~--~~~~Y~asKaal~~l~~~l 174 (261)
T PRK08690 100 LSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRA--IP--NYNVMGMAKASLEAGIRFT 174 (261)
T ss_pred cccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccC--CC--CcccchhHHHHHHHHHHHH
Confidence 0 011122232221 11 134553 33332111 11 123466889887766542
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 175 a~e~~~~gIrVn~i~PG~v~T 195 (261)
T PRK08690 175 AACLGKEGIRCNGISAGPIKT 195 (261)
T ss_pred HHHhhhcCeEEEEEecCcccc
Confidence 689999999998753
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0044 Score=51.24 Aligned_cols=127 Identities=9% Similarity=0.047 Sum_probs=74.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|+.|.+..|+... +..+.+. .+ ...+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 25 ~a~~la~~G~~v~l~~r~~~~----~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~ 99 (256)
T PRK07889 25 VARVAQEQGAEVVLTGFGRAL----RLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQS 99 (256)
T ss_pred HHHHHHHCCCEEEEecCccch----hHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEcccccccc
Confidence 467899999999999886421 1111121 22 2357789999999988877653 5799999997531
Q ss_pred ---------------------hhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCch-hHHHHHHHHHHHHHHH-
Q 026978 71 ---------------------FLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~- 124 (230)
+.+...+..++... . -.++|. |..+. .. .|. ..|..+|..+..+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-~g~Iv~is~~~~---~~---~~~~~~Y~asKaal~~l~~~l 172 (256)
T PRK07889 100 ALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-GGSIVGLDFDAT---VA---WPAYDWMGVAKAALESTNRYL 172 (256)
T ss_pred ccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-CceEEEEeeccc---cc---CCccchhHHHHHHHHHHHHHH
Confidence 01122233333211 1 124442 21111 11 122 2456899887765543
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 173 a~el~~~gIrvn~v~PG~v~T 193 (256)
T PRK07889 173 ARDLGPRGIRVNLVAAGPIRT 193 (256)
T ss_pred HHHhhhcCeEEEeeccCcccC
Confidence 678888999987753
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0077 Score=50.11 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=76.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|+.|.+..|+.. . .+.++.+.. ....+..+.+|++|.+++.++++ .+|++||+++...
T Consensus 24 ia~~la~~G~~vil~~r~~~-~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~ 99 (262)
T PRK07984 24 IAQAMHREGAELAFTYQNDK-L--KGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQ 99 (262)
T ss_pred HHHHHHHCCCEEEEEecchh-H--HHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccc
Confidence 47889999999988888631 1 112222211 11246678999999999887764 4799999997421
Q ss_pred ---------------------hhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCch-hHHHHHHHHHHHHHHH-
Q 026978 71 ---------------------FLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~~- 124 (230)
+.+...+.+++... . -.++|. |+.+.... . |. ..|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~iss~~~~~~--~---~~~~~Y~asKaal~~l~~~l 173 (262)
T PRK07984 100 LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERA--I---PNYNVMGLAKASLEANVRYM 173 (262)
T ss_pred cCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-CcEEEEEecCCCCCC--C---CCcchhHHHHHHHHHHHHHH
Confidence 01122233333221 1 134543 44332211 1 22 3566899888876653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 174 a~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 174 ANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred HHHhcccCcEEeeeecCcccc
Confidence 578888999987743
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.01 Score=50.54 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=44.5
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++| +.|.+..|+... .+. ...+. ...+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 13 ia~~l~~~G~~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~ 85 (308)
T PLN00015 13 TAKALAETGKWHVVMACRDFLK------AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAV 85 (308)
T ss_pred HHHHHHHCCCCEEEEEeCCHHH------HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 478899999 999999987432 111 11222 2247788999999998877654 57999999985
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0052 Score=50.85 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=75.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.... ++.+.+. .+ ..+.++.+|++|.+++.++++ .+|++||+++...
T Consensus 28 ~a~~la~~G~~v~l~~r~~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~ 102 (258)
T PRK07533 28 CARAFRALGAELAVTYLNDKAR---PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKE 102 (258)
T ss_pred HHHHHHHcCCEEEEEeCChhhH---HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcc
Confidence 4678999999999988874311 1122211 11 235678999999988876643 5799999997421
Q ss_pred ---------------------hhhHHHHHHHHHH---hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 ---------------------FLDQLEIVHAIKV---AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~---ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+...+.+++.. .+ .++|. |+.+.... .+ ....|..+|..++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g~Ii~iss~~~~~~--~~--~~~~Y~asKaal~~l~~~l 176 (258)
T PRK07533 103 DLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--GSLLTMSYYGAEKV--VE--NYNLMGPVKAALESSVRYL 176 (258)
T ss_pred cccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--CEEEEEeccccccC--Cc--cchhhHHHHHHHHHHHHHH
Confidence 1223333333322 12 24543 43332211 11 123466889887765543
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 177 a~el~~~gI~Vn~v~PG~v~T 197 (258)
T PRK07533 177 AAELGPKGIRVHAISPGPLKT 197 (258)
T ss_pred HHHhhhcCcEEEEEecCCcCC
Confidence 578899999987743
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0043 Score=53.01 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=44.4
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++| ++|.+++|+..... + ..+.+. ...+.++.+|++|.+++.++++ ++|++||++|.
T Consensus 19 ia~~L~~~G~~~V~l~~r~~~~~~---~--~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~ 91 (314)
T TIGR01289 19 AAKALAATGEWHVIMACRDFLKAE---Q--AAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAV 91 (314)
T ss_pred HHHHHHHcCCCEEEEEeCCHHHHH---H--HHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 478899999 99999999753210 1 111222 2346788999999988776653 58999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0079 Score=49.85 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=74.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|.... .++.+.+.. +......+.+|++|.+++.++++ .+|++||+++...
T Consensus 24 ~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~ 99 (260)
T PRK06997 24 IAKACKREGAELAFTYVGDRF---KDRITEFAA-EFGSDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREA 99 (260)
T ss_pred HHHHHHHCCCeEEEEccchHH---HHHHHHHHH-hcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccc
Confidence 468899999999887664221 122222211 01223468899999998887764 5799999997521
Q ss_pred ---------------------hhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ---------------------FLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+...+.+++... + -.++|. |+.+... ..+ ....|..+|..+..+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-~g~Ii~iss~~~~~--~~~--~~~~Y~asKaal~~l~~~la 174 (260)
T PRK06997 100 IAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-DASLLTLSYLGAER--VVP--NYNTMGLAKASLEASVRYLA 174 (260)
T ss_pred cccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEecccccc--CCC--CcchHHHHHHHHHHHHHHHH
Confidence 11222233333321 1 134543 3333211 111 123577899888776553
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+..+.|.||+..
T Consensus 175 ~el~~~gIrVn~i~PG~v~ 193 (260)
T PRK06997 175 VSLGPKGIRANGISAGPIK 193 (260)
T ss_pred HHhcccCeEEEEEeeCccc
Confidence 57888999998764
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0072 Score=50.87 Aligned_cols=130 Identities=9% Similarity=0.067 Sum_probs=74.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCC----CCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcC
Q 026978 1 MVKASVSSGHKTFVYARPVTQ----NSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTV 66 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~----~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~ 66 (230)
++++|+++|++|.++.|+... .. +++.+. ...+.. ..+.++.+|++|.+++.++++ .+|++||++
T Consensus 22 ia~~la~~G~~vii~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (286)
T PRK07791 22 HALAFAAEGARVVVNDIGVGLDGSASG-GSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNA 100 (286)
T ss_pred HHHHHHHCCCEEEEeeCCccccccccc-hhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 467899999999998876410 00 111111 122322 246788999999888776653 579999999
Q ss_pred CCC-------------------ChhhHHHHHHHH----HHhCC-----cceEec-ccccccCCCCCCCCchhHHHHHHHH
Q 026978 67 AYP-------------------QFLDQLEIVHAI----KVAGN-----IKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 67 ~~~-------------------~~~~~~~ll~Aa----~~ag~-----Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
+.. ++.+...+.+++ ++.+. -.++|. |+....... + ....|..+|..
T Consensus 101 G~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--~--~~~~Y~asKaa 176 (286)
T PRK07791 101 GILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS--V--GQGNYSAAKAG 176 (286)
T ss_pred CCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC--C--CchhhHHHHHH
Confidence 863 122333444443 22210 125653 332211100 0 12356788988
Q ss_pred HHHHHHH-------cCCCEEEEecc
Q 026978 118 VRRAIEA-------AQIPYTFVSAN 135 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g 135 (230)
++.+.+. .|+....|.||
T Consensus 177 l~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 177 IAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred HHHHHHHHHHHHHHhCeEEEEECCC
Confidence 7765543 68999999998
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0092 Score=49.86 Aligned_cols=129 Identities=12% Similarity=0.188 Sum_probs=74.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCC-eEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG-VTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~g-v~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.... ++.+.+. +..| ...+.+|++|.+++.++++ .+|++||+++...
T Consensus 25 iA~~la~~Ga~V~~~~r~~~~~---~~~~~~~--~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~ 99 (271)
T PRK06505 25 IAKQLAAQGAELAFTYQGEALG---KRVKPLA--ESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKN 99 (271)
T ss_pred HHHHHHhCCCEEEEecCchHHH---HHHHHHH--HhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCc
Confidence 4788999999999988863211 1111111 1112 3468899999988876654 5799999998421
Q ss_pred ---------------------hhhHHHHHHHHHHh--CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ---------------------FLDQLEIVHAIKVA--GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++... . -.++|. |+.+... ..+ ....|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~G~Iv~isS~~~~~--~~~--~~~~Y~asKaAl~~l~r~la 174 (271)
T PRK06505 100 ELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-GGSMLTLTYGGSTR--VMP--NYNVMGVAKAALEASVRYLA 174 (271)
T ss_pred cccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-CceEEEEcCCCccc--cCC--ccchhhhhHHHHHHHHHHHH
Confidence 11223333333221 1 135553 2221111 111 123567899887766543
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++..
T Consensus 175 ~el~~~gIrVn~v~PG~i~T 194 (271)
T PRK06505 175 ADYGPQGIRVNAISAGPVRT 194 (271)
T ss_pred HHHhhcCeEEEEEecCCccc
Confidence 589999999998753
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0064 Score=51.46 Aligned_cols=126 Identities=10% Similarity=0.101 Sum_probs=83.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~- 69 (230)
|++.|.++|+.|.+-.-...+ ++.++... ......+.-|+++++++.++.+ |-=.|||++|..
T Consensus 45 LA~~L~~~Gf~V~Agcl~~~g------ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~ 118 (322)
T KOG1610|consen 45 LAKKLDKKGFRVFAGCLTEEG------AESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISG 118 (322)
T ss_pred HHHHHHhcCCEEEEEeecCch------HHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEecccccc
Confidence 478899999999998844433 22333332 5678888999999999999876 345789999843
Q ss_pred -------------------C----hhhHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHH---
Q 026978 70 -------------------Q----FLDQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRA--- 121 (230)
Q Consensus 70 -------------------~----~~~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~--- 121 (230)
| +..++.++--.|++. .|+|. |..|--.. +-..+|..+|..+|.+
T Consensus 119 ~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~-----p~~g~Y~~SK~aVeaf~D~ 191 (322)
T KOG1610|consen 119 FLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVAL-----PALGPYCVSKFAVEAFSDS 191 (322)
T ss_pred ccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccC-----cccccchhhHHHHHHHHHH
Confidence 1 234555566666664 57763 44452111 0123667888877754
Q ss_pred ----HHHcCCCEEEEeccccch
Q 026978 122 ----IEAAQIPYTFVSANLCGA 139 (230)
Q Consensus 122 ----l~~~gl~~tilr~g~~~~ 139 (230)
|+..|++..+|-||.|-.
T Consensus 192 lR~EL~~fGV~VsiiePG~f~T 213 (322)
T KOG1610|consen 192 LRRELRPFGVKVSIIEPGFFKT 213 (322)
T ss_pred HHHHHHhcCcEEEEeccCcccc
Confidence 334799999999997654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0042 Score=47.43 Aligned_cols=115 Identities=17% Similarity=0.313 Sum_probs=70.6
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++| ..|.++.|+.. .++.+. ...++ ...+.++++|++|.+++.++++ ..|+|||+++..
T Consensus 16 ~a~~l~~~g~~~v~~~~r~~~----~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 91 (167)
T PF00106_consen 16 LARALARRGARVVILTSRSED----SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIF 91 (167)
T ss_dssp HHHHHHHTTTEEEEEEESSCH----HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCT
T ss_pred HHHHHHhcCceEEEEeeeccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 478899995 57788888711 012221 12232 3567899999999988877655 569999999875
Q ss_pred C-------------------hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+...+.+++...+ -.++|. |+...... .+ ....|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~--~~--~~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 92 SDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRG--SP--GMSAYSASKAALRGLTQS 161 (167)
T ss_dssp TSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSS--ST--TBHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccC--CC--CChhHHHHHHHHHHHHHH
Confidence 2 224455666665544 356553 44332211 11 124677899998887653
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.016 Score=49.30 Aligned_cols=135 Identities=9% Similarity=0.041 Sum_probs=76.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC----CcchHhhhh-hhcCC--CeEEEEecCCCHHHHHHHhc-------CCCEEEEcC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS----RPSKLEIHK-EFQGI--GVTIIEGELDEHKKIVSILK-------EVDVVISTV 66 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~----~p~k~~~l~-~l~~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~ 66 (230)
++++|+++|++|.++.|+..... .+++.+.+. .+... .+.++.+|++|.+++.++++ .+|++||++
T Consensus 24 ia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 103 (305)
T PRK08303 24 IAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Confidence 47889999999999999753210 011221111 22222 36678999999988877654 579999998
Q ss_pred -CC-------CC----------------hhhHHH----HHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHH
Q 026978 67 -AY-------PQ----------------FLDQLE----IVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKR 116 (230)
Q Consensus 67 -~~-------~~----------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~ 116 (230)
+. .. +.+... ++..+++.+ -.++|. |+ -+...... ......|..+|.
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~~~~--~~~~~~Y~asKa 180 (305)
T PRK08303 104 WGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYNATH--YRLSVFYDLAKT 180 (305)
T ss_pred cccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccccCcC--CCCcchhHHHHH
Confidence 52 10 112222 333333333 246653 33 22110000 001235778998
Q ss_pred HHHHHHHH-------cCCCEEEEeccccc
Q 026978 117 IVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 117 ~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
.+..+.+. .|+....|.||++.
T Consensus 181 al~~lt~~La~el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 181 SVNRLAFSLAHELAPHGATAVALTPGWLR 209 (305)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence 87766543 57888899999774
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0059 Score=43.98 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=57.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.+.+.+|+++.++. ++.+ .+...|+.++.||.+|.+.|.++ ++.++.|+.+... ......++.
T Consensus 13 i~~~L~~~~~~vvvid~d~------~~~~---~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~--d~~n~~~~~ 81 (116)
T PF02254_consen 13 IAEQLKEGGIDVVVIDRDP------ERVE---ELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDD--DEENLLIAL 81 (116)
T ss_dssp HHHHHHHTTSEEEEEESSH------HHHH---HHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSS--HHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEECCc------HHHH---HHHhcccccccccchhhhHHhhcCccccCEEEEccCC--HHHHHHHHH
Confidence 4677888777999999873 2322 44567899999999999999986 6789999988763 345566677
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
.+++.+...+++
T Consensus 82 ~~r~~~~~~~ii 93 (116)
T PF02254_consen 82 LARELNPDIRII 93 (116)
T ss_dssp HHHHHTTTSEEE
T ss_pred HHHHHCCCCeEE
Confidence 778744245555
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0041 Score=50.75 Aligned_cols=82 Identities=13% Similarity=0.310 Sum_probs=59.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.+.||+|+++.++.. +.+...+ ...++.++.||-+|++.|.+| +..+|+|+-+.+.... ..-+..
T Consensus 15 va~~L~~~g~~Vv~Id~d~~------~~~~~~~-~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~--N~i~~~ 85 (225)
T COG0569 15 VARELSEEGHNVVLIDRDEE------RVEEFLA-DELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV--NSVLAL 85 (225)
T ss_pred HHHHHHhCCCceEEEEcCHH------HHHHHhh-hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH--HHHHHH
Confidence 47889999999999999854 2221101 126789999999999999999 8899999998876322 222223
Q ss_pred -HHHHhCCcceEec
Q 026978 80 -AIKVAGNIKRFLP 92 (230)
Q Consensus 80 -Aa~~ag~Vkr~v~ 92 (230)
|++..| +++++.
T Consensus 86 la~~~~g-v~~via 98 (225)
T COG0569 86 LALKEFG-VPRVIA 98 (225)
T ss_pred HHHHhcC-CCcEEE
Confidence 345578 999874
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.014 Score=48.37 Aligned_cols=128 Identities=14% Similarity=0.224 Sum_probs=72.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC-C-eEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI-G-VTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~-g-v~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|+.|.+..|+... .++ ++++... | ..++.+|++|.+++.++++ .+|++||+++...
T Consensus 26 ~a~~la~~G~~v~~~~r~~~~---~~~---~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~ 99 (260)
T PRK06603 26 IAQLAKKHGAELWFTYQSEVL---EKR---VKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADK 99 (260)
T ss_pred HHHHHHHcCCEEEEEeCchHH---HHH---HHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCc
Confidence 467888999999888776311 111 2223211 3 3357899999998887764 4799999987420
Q ss_pred ----------------------hhhHHHHHHHHHHh-CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ----------------------FLDQLEIVHAIKVA-GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ----------------------~~~~~~ll~Aa~~a-g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+...+++++... ..-.++|. |+.+... ..+ ....|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~--~~~--~~~~Y~asKaal~~l~~~la 175 (260)
T PRK06603 100 NELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK--VIP--NYNVMGVAKAALEASVKYLA 175 (260)
T ss_pred ccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc--CCC--cccchhhHHHHHHHHHHHHH
Confidence 11222333332211 00125553 3333211 111 112466889887765542
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 176 ~el~~~gIrVn~v~PG~v~ 194 (260)
T PRK06603 176 NDMGENNIRVNAISAGPIK 194 (260)
T ss_pred HHhhhcCeEEEEEecCcCc
Confidence 67999999999874
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.032 Score=45.24 Aligned_cols=130 Identities=13% Similarity=0.147 Sum_probs=75.0
Q ss_pred CHHHHhhC-CCeEEEEE-cCCCCCCCcchHhhhhh--hcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCC
Q 026978 1 MVKASVSS-GHKTFVYA-RPVTQNSRPSKLEIHKE--FQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~-R~~~~~~~p~k~~~l~~--l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~ 67 (230)
||++|++. |.++.+-+ |+.+.. .++++. ..++++++++.|+++-+++.++.+ |.|++|+.+|
T Consensus 19 LVk~llk~~~i~~iiat~r~~e~a-----~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaG 93 (249)
T KOG1611|consen 19 LVKELLKDKGIEVIIATARDPEKA-----ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAG 93 (249)
T ss_pred HHHHHhcCCCcEEEEEecCChHHh-----hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccc
Confidence 57888874 66665554 443321 222222 236889999999998888776644 6789999988
Q ss_pred CCC------------------------h---hhHHHHHHHHHHh------CCcce--Ee--cccccccCCCCCCCCchhH
Q 026978 68 YPQ------------------------F---LDQLEIVHAIKVA------GNIKR--FL--PSEFGCEEDKVRPLPPFEA 110 (230)
Q Consensus 68 ~~~------------------------~---~~~~~ll~Aa~~a------g~Vkr--~v--~S~~g~~~~~~~~~~p~~~ 110 (230)
... + +....|+..++.. + +.| +| .|..|.- ... ...+...
T Consensus 94 i~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s-~~raaIinisS~~~s~-~~~-~~~~~~A 170 (249)
T KOG1611|consen 94 IALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS-VSRAAIINISSSAGSI-GGF-RPGGLSA 170 (249)
T ss_pred eeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc-ccceeEEEeecccccc-CCC-CCcchhh
Confidence 641 1 1223444433322 2 334 33 3444431 111 1124456
Q ss_pred HHHHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 111 YLEKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 111 ~~~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
|..+|.++-...++ .++-.+.|.|||.-
T Consensus 171 YrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 171 YRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred hHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 77899887766554 45566777888864
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0032 Score=51.50 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=42.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC--HHHHHHHhcCCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE--HKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d--~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|+++.|+.... + ....+++++.++-.+ .+.+.++++++|+|||+++...
T Consensus 32 LA~~L~~~G~~V~li~r~~~~~--~--------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 32 IAETFLAAGHEVTLVTTKTAVK--P--------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred HHHHHHhCCCEEEEEECccccc--C--------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 5789999999999999864321 1 112467777754432 3567777889999999999754
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.032 Score=50.09 Aligned_cols=135 Identities=15% Similarity=0.263 Sum_probs=86.6
Q ss_pred CHHHHhhCC---CeEEEEEcCCCCCCCcchHhhhhhh---------c------CCCeEEEEecCCC------HHHHHHHh
Q 026978 1 MVKASVSSG---HKTFVYARPVTQNSRPSKLEIHKEF---------Q------GIGVTIIEGELDE------HKKIVSIL 56 (230)
Q Consensus 1 lv~~Ll~~g---~~V~~l~R~~~~~~~p~k~~~l~~l---------~------~~gv~vv~gD~~d------~~~L~~al 56 (230)
|++.||..- -.+.++.|...+.. +. +.+..+ . ...+..+.||+.+ ..++....
T Consensus 28 liEklLr~~p~v~~IYlLiR~k~g~~-~~--~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~ 104 (467)
T KOG1221|consen 28 LIEKLLRTTPDVKRIYLLIRAKKGKA-AQ--ERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLA 104 (467)
T ss_pred HHHHHHhcCcCcceEEEEEecCCCCC-HH--HHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCChHHHHHHH
Confidence 356677643 36788899876643 21 122211 0 1457789999874 45666677
Q ss_pred cCCCEEEEcCCCC------------ChhhHHHHHHHHHHhCCcceEec-c-cccccC----CC-----------------
Q 026978 57 KEVDVVISTVAYP------------QFLDQLEIVHAIKVAGNIKRFLP-S-EFGCEE----DK----------------- 101 (230)
Q Consensus 57 ~g~D~Vi~~~~~~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S-~~g~~~----~~----------------- 101 (230)
+.+|+|||+|+.. +..+++++++-|++.-+.+-|+. | .|.... .+
T Consensus 105 ~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~ 184 (467)
T KOG1221|consen 105 DEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKL 184 (467)
T ss_pred hcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhh
Confidence 8999999999975 35689999999999754676764 2 232210 00
Q ss_pred --C---------C-CC---CchhHHHHHHHHHHHHHHH--cCCCEEEEeccccch
Q 026978 102 --V---------R-PL---PPFEAYLEKKRIVRRAIEA--AQIPYTFVSANLCGA 139 (230)
Q Consensus 102 --~---------~-~~---~p~~~~~~~K~~~e~~l~~--~gl~~tilr~g~~~~ 139 (230)
. . .+ .| ..|.-+|...|..+.+ .++|.+|+||+....
T Consensus 185 ~~~~~~~~ld~~~~~l~~~~P-NTYtfTKal~E~~i~~~~~~lPivIiRPsiI~s 238 (467)
T KOG1221|consen 185 DENLSDELLDQKAPKLLGGWP-NTYTFTKALAEMVIQKEAENLPLVIIRPSIITS 238 (467)
T ss_pred hccchHHHHHHhhHHhcCCCC-CceeehHhhHHHHHHhhccCCCeEEEcCCceec
Confidence 0 0 00 01 1344678888998876 689999999987654
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.013 Score=48.42 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=63.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|++.|.++|++|.+-+-...+. + ...++.++.|-+.|.++|.+.++ ++++||.+.++....-..++.
T Consensus 17 la~~L~~~g~~v~~Svat~~g~--~---------~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~ 85 (248)
T PRK08057 17 LARALAAAGVDIVLSLAGRTGG--P---------ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQISANAA 85 (248)
T ss_pred HHHHHHhCCCeEEEEEccCCCC--c---------ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHH
Confidence 4677888999887765544322 1 24578999999999999999998 889999999999888999999
Q ss_pred HHHHHhCCcceE
Q 026978 79 HAIKVAGNIKRF 90 (230)
Q Consensus 79 ~Aa~~ag~Vkr~ 90 (230)
+||++.| +..+
T Consensus 86 ~ac~~~~-ipyi 96 (248)
T PRK08057 86 AACRALG-IPYL 96 (248)
T ss_pred HHHHHhC-CcEE
Confidence 9999999 8754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.025 Score=48.46 Aligned_cols=138 Identities=15% Similarity=0.142 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|..+|..|+...|+..... ..+.+..+......+.++++|++|.+++.+..+ ..|++|+.||...
T Consensus 51 ta~~La~~Ga~Vv~~~R~~~~~~-~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~ 129 (314)
T KOG1208|consen 51 TARELALRGAHVVLACRNEERGE-EAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF 129 (314)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc
Confidence 37899999999999999963221 011111111234557779999999999887654 4599999998651
Q ss_pred ------------------hhhHHHHHHHHHHhCCcceEec-cc-cc-c--cCCC----CCC-CCchhHHHHHHHHHHHHH
Q 026978 71 ------------------FLDQLEIVHAIKVAGNIKRFLP-SE-FG-C--EEDK----VRP-LPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g-~--~~~~----~~~-~~p~~~~~~~K~~~e~~l 122 (230)
..-+..|++.++.+. -.|+|. |+ .+ . +... ... ......|..+|.+..-+.
T Consensus 130 ~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~ 208 (314)
T KOG1208|consen 130 SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLA 208 (314)
T ss_pred ccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHH
Confidence 123567788888876 467663 43 32 1 1111 010 112223668887754333
Q ss_pred H----H--cCCCEEEEeccccchh
Q 026978 123 E----A--AQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~----~--~gl~~tilr~g~~~~~ 140 (230)
. . .|+....+.||....+
T Consensus 209 ~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 209 NELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred HHHHHHhhcCceEEEECCCccccc
Confidence 2 2 2788888889877665
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.03 Score=60.00 Aligned_cols=96 Identities=10% Similarity=0.112 Sum_probs=64.6
Q ss_pred CeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC-------------------ChhhHHHHHHHHHHhCCcceEec
Q 026978 38 GVTIIEGELDEHKKIVSILK------EVDVVISTVAYP-------------------QFLDQLEIVHAIKVAGNIKRFLP 92 (230)
Q Consensus 38 gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~-------------------~~~~~~~ll~Aa~~ag~Vkr~v~ 92 (230)
.+.++.+|++|.+++.++++ ++|.|||++|.. ++.+..++++++.... .+++|.
T Consensus 2095 ~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~-~~~IV~ 2173 (2582)
T TIGR02813 2095 SAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN-IKLLAL 2173 (2582)
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 36789999999998887766 479999999863 1457788999988776 677763
Q ss_pred -cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----cCCCEEEEeccccch
Q 026978 93 -SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-----AQIPYTFVSANLCGA 139 (230)
Q Consensus 93 -S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-----~gl~~tilr~g~~~~ 139 (230)
|+ .|..... ....|..+|.....+.+. .++....|.+|+|-.
T Consensus 2174 ~SSvag~~G~~-----gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2174 FSSAAGFYGNT-----GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred EechhhcCCCC-----CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 43 2321111 123566788665544322 357778888887743
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.012 Score=49.88 Aligned_cols=66 Identities=12% Similarity=0.117 Sum_probs=44.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~ 69 (230)
|+.++..+|++|++++|+..+.. +.++ .+ ++. ...|.+..+|+.|-++....+++ .|.+|||+|..
T Consensus 49 la~e~~~~ga~Vti~ar~~~kl~-~a~~-~l-~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 49 LALECKREGADVTITARSGKKLL-EAKA-EL-ELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVA 123 (331)
T ss_pred HHHHHHHccCceEEEeccHHHHH-HHHh-hh-hhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcc
Confidence 35678889999999999865321 1111 01 111 12256888999988887776663 49999999975
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.011 Score=44.03 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=59.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
+..|.+.|++|++++.++.. ++..+..+++++.+|+.+++ -+.-+++|.|+++-.+ .+-|..+++-|
T Consensus 32 A~~L~~~G~~ViaIDi~~~a---------V~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp--~el~~~~~~la 98 (134)
T PRK04148 32 AKKLKESGFDVIVIDINEKA---------VEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPP--RDLQPFILELA 98 (134)
T ss_pred HHHHHHCCCEEEEEECCHHH---------HHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCC--HHHHHHHHHHH
Confidence 56788889999999987432 12234568999999999876 3556799999998655 45688999999
Q ss_pred HHhCCcceEec
Q 026978 82 KVAGNIKRFLP 92 (230)
Q Consensus 82 ~~ag~Vkr~v~ 92 (230)
++.| +.-+|.
T Consensus 99 ~~~~-~~~~i~ 108 (134)
T PRK04148 99 KKIN-VPLIIK 108 (134)
T ss_pred HHcC-CCEEEE
Confidence 9999 777663
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.014 Score=50.13 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=53.9
Q ss_pred HHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-----------
Q 026978 4 ASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ----------- 70 (230)
Q Consensus 4 ~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~----------- 70 (230)
.|+.++ .+++.++++... .+. ..+.+....+...+.+|..++.++++|+|+||+++|...
T Consensus 27 ~l~~~~~~~elvL~Di~~~~------g~a-~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~ 99 (321)
T PTZ00325 27 LLKQNPHVSELSLYDIVGAP------GVA-ADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFN 99 (321)
T ss_pred HHhcCCCCCEEEEEecCCCc------ccc-cchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHH
Confidence 344344 689999883211 111 123222334445567776667889999999999999742
Q ss_pred --hhhHHHHHHHHHHhCCcceEec
Q 026978 71 --FLDQLEIVHAIKVAGNIKRFLP 92 (230)
Q Consensus 71 --~~~~~~ll~Aa~~ag~Vkr~v~ 92 (230)
....++++++++++| ++++|.
T Consensus 100 ~N~~i~~~i~~~i~~~~-~~~ivi 122 (321)
T PTZ00325 100 TNAPIVRDLVAAVASSA-PKAIVG 122 (321)
T ss_pred HHHHHHHHHHHHHHHHC-CCeEEE
Confidence 346788999999999 999774
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0094 Score=48.78 Aligned_cols=62 Identities=23% Similarity=0.369 Sum_probs=42.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|+++.+..+.. +. .+ .......+.++....+.+.++++ ++|+|||+|+..+
T Consensus 35 LA~~L~~~Ga~V~li~g~~~~~--~~------~~~~~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 35 IAEELISKGAHVIYLHGYFAEK--PN------DINNQLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHCCCeEEEEeCCCcCC--Cc------ccCCceeEEEEecHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 5789999999999998765422 11 01 01223446664444567888885 7899999999864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.12 Score=43.60 Aligned_cols=126 Identities=15% Similarity=0.178 Sum_probs=78.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC-CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI-GVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~-gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++.+++++|..+.+.+.+..+. .+ ..+.+++. .+....+|++|.+++.+..+ .+|++|+.||...
T Consensus 54 ialefa~rg~~~vl~Din~~~~--~e---tv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~ 128 (300)
T KOG1201|consen 54 IALEFAKRGAKLVLWDINKQGN--EE---TVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGK 128 (300)
T ss_pred HHHHHHHhCCeEEEEeccccch--HH---HHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCC
Confidence 3678889999887887776543 22 22233322 38889999999887765543 6799999999751
Q ss_pred ---------------------hhhHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHH------
Q 026978 71 ---------------------FLDQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRA------ 121 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~------ 121 (230)
..-.+.++-.+.+.. =.++|- |..|.-... -..+|..+|..+.-.
T Consensus 129 ~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~-----gl~~YcaSK~a~vGfhesL~~ 202 (300)
T KOG1201|consen 129 KLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPA-----GLADYCASKFAAVGFHESLSM 202 (300)
T ss_pred CccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCc-----cchhhhhhHHHHHHHHHHHHH
Confidence 123456666777655 357763 555542211 123566778665432
Q ss_pred -HHH---cCCCEEEEecccc
Q 026978 122 -IEA---AQIPYTFVSANLC 137 (230)
Q Consensus 122 -l~~---~gl~~tilr~g~~ 137 (230)
|++ .|++.|.+.|+..
T Consensus 203 EL~~~~~~~IktTlv~P~~i 222 (300)
T KOG1201|consen 203 ELRALGKDGIKTTLVCPYFI 222 (300)
T ss_pred HHHhcCCCCeeEEEEeeeec
Confidence 333 4688888887554
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.23 Score=40.46 Aligned_cols=127 Identities=13% Similarity=0.189 Sum_probs=73.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC----CCeEEEEecCCC-HHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG----IGVTIIEGELDE-HKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~----~gv~vv~gD~~d-~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|+.|+++.|..... +.+.+..... ..+.....|+++ .+++..+++ ++|++|++++.
T Consensus 21 ia~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 96 (251)
T COG1028 21 IARALAREGARVVVAARRSEEE----AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGI 96 (251)
T ss_pred HHHHHHHCCCeEEEEcCCCchh----hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 4688999999999998875421 1111122222 356778899998 777665544 48999999986
Q ss_pred C----C----------------hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCc-hhHHHHHHHHHHHHHH---
Q 026978 69 P----Q----------------FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPP-FEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 69 ~----~----------------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p-~~~~~~~K~~~e~~l~--- 123 (230)
. . +.+...+.+++...-.-+++|. |+....... + ...|..+|.....+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~-----~~~~~Y~~sK~al~~~~~~l~ 171 (251)
T COG1028 97 AGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGP-----PGQAAYAASKAALIGLTKALA 171 (251)
T ss_pred CCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCC-----CCcchHHHHHHHHHHHHHHHH
Confidence 3 1 1233334443332220015553 332221111 1 1367788987765433
Q ss_pred ----HcCCCEEEEeccc
Q 026978 124 ----AAQIPYTFVSANL 136 (230)
Q Consensus 124 ----~~gl~~tilr~g~ 136 (230)
..|+..+.|.||.
T Consensus 172 ~e~~~~gi~v~~v~PG~ 188 (251)
T COG1028 172 LELAPRGIRVNAVAPGY 188 (251)
T ss_pred HHHhhhCcEEEEEEecc
Confidence 2578899999993
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.04 Score=44.78 Aligned_cols=129 Identities=14% Similarity=0.206 Sum_probs=80.8
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
.++|+.+|..+.++..+... |+-...|++. ....+-+++.|+++..+++++++ ..|++|+-++..+
T Consensus 22 sk~Ll~kgik~~~i~~~~En---~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dkd 98 (261)
T KOG4169|consen 22 SKALLEKGIKVLVIDDSEEN---PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDDKD 98 (261)
T ss_pred HHHHHHcCchheeehhhhhC---HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccchh
Confidence 57899999888777654332 2111112222 23457789999999999998877 4599999999763
Q ss_pred ------------hhhHHHHHHHHHH-hCCcceEe---cccccccCCCCCCCCchhH-HHHHHHHH---------HHHHHH
Q 026978 71 ------------FLDQLEIVHAIKV-AGNIKRFL---PSEFGCEEDKVRPLPPFEA-YLEKKRIV---------RRAIEA 124 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~-ag~Vkr~v---~S~~g~~~~~~~~~~p~~~-~~~~K~~~---------e~~l~~ 124 (230)
+.++.-.+..+.+ .|--.=+| .|.+|.++. |..| |..+|.-+ ..+++.
T Consensus 99 ~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~------p~~pVY~AsKaGVvgFTRSla~~ayy~~ 172 (261)
T KOG4169|consen 99 WERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM------PVFPVYAASKAGVVGFTRSLADLAYYQR 172 (261)
T ss_pred HHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc------ccchhhhhcccceeeeehhhhhhhhHhh
Confidence 2455556666644 33022243 366776532 2223 34666432 456667
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
+|+....+.||+-.-
T Consensus 173 sGV~~~avCPG~t~t 187 (261)
T KOG4169|consen 173 SGVRFNAVCPGFTRT 187 (261)
T ss_pred cCEEEEEECCCcchH
Confidence 899999999987653
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.019 Score=45.52 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=46.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
++.|++.|++|+++.|+.. |++.+.. +. ..++++..+|+.|.+++.++++++|+||++.+...
T Consensus 45 a~~l~~~g~~V~l~~R~~~------~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~g~ 109 (194)
T cd01078 45 AVLLAREGARVVLVGRDLE------RAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAAGV 109 (194)
T ss_pred HHHHHHCCCEEEEEcCCHH------HHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCCCc
Confidence 5678888999999999742 3333222 21 23667888899999999999999999999877543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.04 Score=49.35 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=57.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
+++.|.++|++|++++|+.. +.+ .+.. .+++++.||.++.+.|.++ ++++|.||.+.+... ....+.
T Consensus 15 ~a~~L~~~g~~v~vid~~~~------~~~---~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~--~n~~~~ 83 (453)
T PRK09496 15 LAENLSGENNDVTVIDTDEE------RLR---RLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDE--TNMVAC 83 (453)
T ss_pred HHHHHHhCCCcEEEEECCHH------HHH---HHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChH--HHHHHH
Confidence 36778889999999998743 322 3322 5899999999999999999 899999999876532 233345
Q ss_pred HHHHHh-CCcceEe
Q 026978 79 HAIKVA-GNIKRFL 91 (230)
Q Consensus 79 ~Aa~~a-g~Vkr~v 91 (230)
..+++. + ..++|
T Consensus 84 ~~~r~~~~-~~~ii 96 (453)
T PRK09496 84 QIAKSLFG-APTTI 96 (453)
T ss_pred HHHHHhcC-CCeEE
Confidence 566665 6 55554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.052 Score=48.66 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=56.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|++|++++++.. +.+.+... ..++.++.||.+|.+.|.++ ++++|+||.+.+.. .....+..
T Consensus 246 l~~~L~~~~~~v~vid~~~~------~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~--~~n~~~~~ 316 (453)
T PRK09496 246 LAKLLEKEGYSVKLIERDPE------RAEELAEE-LPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD--EANILSSL 316 (453)
T ss_pred HHHHHHhCCCeEEEEECCHH------HHHHHHHH-CCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc--HHHHHHHH
Confidence 46778888999999998743 32222221 24788999999999999654 67899999877643 23333445
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
.|++.+ +++++.
T Consensus 317 ~~~~~~-~~~ii~ 328 (453)
T PRK09496 317 LAKRLG-AKKVIA 328 (453)
T ss_pred HHHHhC-CCeEEE
Confidence 667888 777663
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.045 Score=50.65 Aligned_cols=80 Identities=13% Similarity=0.174 Sum_probs=57.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|++|++++++. ++.+ .+++.|..++.||.+|++.|+++ ++.+|+|+.+.+.. +...+++.
T Consensus 432 la~~L~~~g~~vvvId~d~------~~~~---~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~--~~~~~iv~ 500 (558)
T PRK10669 432 LGEKLLAAGIPLVVIETSR------TRVD---ELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG--YEAGEIVA 500 (558)
T ss_pred HHHHHHHCCCCEEEEECCH------HHHH---HHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh--HHHHHHHH
Confidence 4678888999999999873 3333 34457999999999999999876 56889988876542 23445666
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
++++.....+++
T Consensus 501 ~~~~~~~~~~ii 512 (558)
T PRK10669 501 SAREKRPDIEII 512 (558)
T ss_pred HHHHHCCCCeEE
Confidence 666643245555
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.055 Score=44.85 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=61.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|++.|.++|+ |.+-+=.+.+.. +..-...+++++.|-+.|.+.|.+.++ ++++||.+.++....-..|+.
T Consensus 15 la~~L~~~g~-v~~sv~t~~g~~-------~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~ 86 (249)
T PF02571_consen 15 LAERLAEAGY-VIVSVATSYGGE-------LLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAEISQNAI 86 (249)
T ss_pred HHHHHHhcCC-EEEEEEhhhhHh-------hhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHHHHHHHH
Confidence 4678889998 544332222111 001112568999999999999999996 899999999998888899999
Q ss_pred HHHHHhCCcceEe
Q 026978 79 HAIKVAGNIKRFL 91 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v 91 (230)
+||++.| +..+-
T Consensus 87 ~a~~~~~-ipylR 98 (249)
T PF02571_consen 87 EACRELG-IPYLR 98 (249)
T ss_pred HHHhhcC-cceEE
Confidence 9999999 88543
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.046 Score=53.86 Aligned_cols=46 Identities=15% Similarity=0.201 Sum_probs=36.2
Q ss_pred CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhC
Q 026978 37 IGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAG 85 (230)
Q Consensus 37 ~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag 85 (230)
.+++.+..|++|.++|.++++++|+||+|++.. ....++.+|.++|
T Consensus 627 ~~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~~---~H~~VAkaAieaG 672 (1042)
T PLN02819 627 ENAEAVQLDVSDSESLLKYVSQVDVVISLLPAS---CHAVVAKACIELK 672 (1042)
T ss_pred CCCceEEeecCCHHHHHHhhcCCCEEEECCCch---hhHHHHHHHHHcC
Confidence 478889999999999999999999999999873 2344455555555
|
|
| >COG1255 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.06 Score=38.83 Aligned_cols=79 Identities=16% Similarity=0.218 Sum_probs=61.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++++|.++|++|.+.+=+.... ..|+.++.-|++|+. .+.-+|+|.+++.-.+. +-|..+++-
T Consensus 28 VA~~L~e~g~dv~atDI~~~~a-------------~~g~~~v~DDitnP~--~~iY~~A~lIYSiRppp--El~~~ildv 90 (129)
T COG1255 28 VAKRLAERGFDVLATDINEKTA-------------PEGLRFVVDDITNPN--ISIYEGADLIYSIRPPP--ELQSAILDV 90 (129)
T ss_pred HHHHHHHcCCcEEEEecccccC-------------cccceEEEccCCCcc--HHHhhCccceeecCCCH--HHHHHHHHH
Confidence 3678889999999987654311 368999999999987 57788999999986554 568889999
Q ss_pred HHHhCCcceEecccccc
Q 026978 81 IKVAGNIKRFLPSEFGC 97 (230)
Q Consensus 81 a~~ag~Vkr~v~S~~g~ 97 (230)
+++.| ..-+|-.-.|.
T Consensus 91 a~aVg-a~l~I~pL~Ge 106 (129)
T COG1255 91 AKAVG-APLYIKPLTGE 106 (129)
T ss_pred HHhhC-CCEEEEecCCC
Confidence 99999 88877544443
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.057 Score=43.90 Aligned_cols=122 Identities=20% Similarity=0.279 Sum_probs=75.8
Q ss_pred EecCCCHHHHHHHhcCC--CEEEEcCCCC----------------ChhhHHHHHHHHHHhCCcceEec--cc--ccc---
Q 026978 43 EGELDEHKKIVSILKEV--DVVISTVAYP----------------QFLDQLEIVHAIKVAGNIKRFLP--SE--FGC--- 97 (230)
Q Consensus 43 ~gD~~d~~~L~~al~g~--D~Vi~~~~~~----------------~~~~~~~ll~Aa~~ag~Vkr~v~--S~--~g~--- 97 (230)
.+|+++.++.++.+... ..|||+++.. ++.-+.|++..|-+.| |++++. |. |.-
T Consensus 38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~ 116 (315)
T KOG1431|consen 38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTS 116 (315)
T ss_pred cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCC
Confidence 46889988888888854 7899998864 2345789999999999 998874 21 321
Q ss_pred -cCCCC----CCCCchh-HHHHHHHHH----HHHHHHcCCCEEEEeccccch---hhcc-------ccc-----CCCCCC
Q 026978 98 -EEDKV----RPLPPFE-AYLEKKRIV----RRAIEAAQIPYTFVSANLCGA---YFVN-------VLL-----RPFESH 152 (230)
Q Consensus 98 -~~~~~----~~~~p~~-~~~~~K~~~----e~~l~~~gl~~tilr~g~~~~---~~~~-------~~~-----~~~~~~ 152 (230)
+.++. .+++|.. .|.-+|+.+ ..|-.++|-.+|.+.|.-.++ ++.| .++ ...+..
T Consensus 117 yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gt 196 (315)
T KOG1431|consen 117 YPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGT 196 (315)
T ss_pred CCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCC
Confidence 12221 3334432 344566443 345556899999988755443 2222 111 111111
Q ss_pred CcEEEecCCCccc
Q 026978 153 DDVVVYGSGEAKA 165 (230)
Q Consensus 153 ~~~~i~g~G~~~~ 165 (230)
+.+.+||.|.-.+
T Consensus 197 d~~~VwGsG~PlR 209 (315)
T KOG1431|consen 197 DELTVWGSGSPLR 209 (315)
T ss_pred ceEEEecCCChHH
Confidence 4799999998665
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.067 Score=50.03 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=59.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|++++++++++ ++.+ .+++.|..++.||.+|++.|+++ ++.+|+||.+.+. .+....++.
T Consensus 415 va~~L~~~g~~vvvID~d~------~~v~---~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d--~~~n~~i~~ 483 (601)
T PRK03659 415 IGRLLMANKMRITVLERDI------SAVN---LMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE--PEDTMKIVE 483 (601)
T ss_pred HHHHHHhCCCCEEEEECCH------HHHH---HHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC--HHHHHHHHH
Confidence 3677888999999999873 3333 34457899999999999999987 7789999988764 345666777
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
.+++...-.+++
T Consensus 484 ~~r~~~p~~~Ii 495 (601)
T PRK03659 484 LCQQHFPHLHIL 495 (601)
T ss_pred HHHHHCCCCeEE
Confidence 788765233444
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.07 Score=46.09 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=53.1
Q ss_pred CHHHHhh----CCCeEEEEEcCCCCCCCcchHhhhh-hhcC------CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVS----SGHKTFVYARPVTQNSRPSKLEIHK-EFQG------IGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~----~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~------~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++++++ .|...-+-.|+.. |++... .... +..-++.+|.+|+++|.+..+.+-+|++|+|+-
T Consensus 21 ivee~v~~~~~~~~slavAGRn~~------KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~vivN~vGPy 94 (423)
T KOG2733|consen 21 IVEEAVSSQVFEGLSLAVAGRNEK------KLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARVIVNCVGPY 94 (423)
T ss_pred eHHHHhhhhcccCceEEEecCCHH------HHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEEEEeccccc
Confidence 4667777 6677777788753 333221 1111 122388999999999999999999999999985
Q ss_pred ChhhHHHHHHHHHHhC
Q 026978 70 QFLDQLEIVHAIKVAG 85 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ag 85 (230)
... ..+++.||.++|
T Consensus 95 R~h-GE~VVkacienG 109 (423)
T KOG2733|consen 95 RFH-GEPVVKACIENG 109 (423)
T ss_pred eec-CcHHHHHHHHcC
Confidence 332 245666666666
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.31 Score=39.38 Aligned_cols=60 Identities=12% Similarity=0.271 Sum_probs=46.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~ 69 (230)
|++++.+.|+.|.+-.|..+.-. .|. +.|+...+.|+++++++..... ..|++|+.+|..
T Consensus 24 la~ef~~~G~~V~AtaR~~e~M~---------~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~ 92 (289)
T KOG1209|consen 24 LAKEFARNGYLVYATARRLEPMA---------QLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQS 92 (289)
T ss_pred HHHHHHhCCeEEEEEccccchHh---------hHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCC
Confidence 46788899999999999865321 232 5789999999999998876544 248999888864
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.042 Score=47.93 Aligned_cols=81 Identities=12% Similarity=0.246 Sum_probs=58.9
Q ss_pred HHhcCCCEEEEcCCCCC--------------hhhHHHHHHHHH----HhCCcceEe-cccccccCCCCCCCCchhHHHHH
Q 026978 54 SILKEVDVVISTVAYPQ--------------FLDQLEIVHAIK----VAGNIKRFL-PSEFGCEEDKVRPLPPFEAYLEK 114 (230)
Q Consensus 54 ~al~g~D~Vi~~~~~~~--------------~~~~~~ll~Aa~----~ag~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~ 114 (230)
..+..+..+|++.|... .+-...|+++.. +.+ .|++| .++|+.... ....+|+..
T Consensus 199 P~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~-----s~~f~Yfk~ 272 (410)
T PF08732_consen 199 PSLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAI-----SSMFPYFKT 272 (410)
T ss_pred CchhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchh-----hhhhhhhHH
Confidence 46678899999999752 223566777777 677 88876 577876432 134589999
Q ss_pred HHHHHHHHHHc---CCC-EEEEeccccchh
Q 026978 115 KRIVRRAIEAA---QIP-YTFVSANLCGAY 140 (230)
Q Consensus 115 K~~~e~~l~~~---gl~-~tilr~g~~~~~ 140 (230)
|.+.|+-|+.. .++ .+|+|||+..+.
T Consensus 273 K~~LE~dl~~~l~~~l~~lvILRPGplvG~ 302 (410)
T PF08732_consen 273 KGELENDLQNLLPPKLKHLVILRPGPLVGE 302 (410)
T ss_pred HHHHHHHHHhhcccccceEEEecCccccCC
Confidence 99999999873 254 778899998764
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.11 Score=48.67 Aligned_cols=74 Identities=19% Similarity=0.253 Sum_probs=55.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|+++++++++. ++.+ .++..|..++.||.+|++.|.++ ++.+|.||.+... .+....++.
T Consensus 415 va~~L~~~g~~vvvID~d~------~~v~---~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d--~~~n~~i~~ 483 (621)
T PRK03562 415 VGRLLLSSGVKMTVLDHDP------DHIE---TLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD--PQTSLQLVE 483 (621)
T ss_pred HHHHHHhCCCCEEEEECCH------HHHH---HHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCC--HHHHHHHHH
Confidence 3577888899999999874 3333 34457899999999999999865 6688999988754 344566666
Q ss_pred HHHHhC
Q 026978 80 AIKVAG 85 (230)
Q Consensus 80 Aa~~ag 85 (230)
.+|+..
T Consensus 484 ~ar~~~ 489 (621)
T PRK03562 484 LVKEHF 489 (621)
T ss_pred HHHHhC
Confidence 777653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.21 Score=40.08 Aligned_cols=62 Identities=11% Similarity=0.198 Sum_probs=44.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
|++++++.|-+|++-.|+.. +++..+.. .++..-..+|+.|.++..+.++ ..+++|+++|..
T Consensus 21 lak~f~elgN~VIi~gR~e~------~L~e~~~~-~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIq 89 (245)
T COG3967 21 LAKRFLELGNTVIICGRNEE------RLAEAKAE-NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQ 89 (245)
T ss_pred HHHHHHHhCCEEEEecCcHH------HHHHHHhc-CcchheeeecccchhhHHHHHHHHHhhCCchheeeeccccc
Confidence 46788899999999999753 22222222 4567778899999876554433 569999999974
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.81 Score=36.57 Aligned_cols=63 Identities=8% Similarity=0.124 Sum_probs=42.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
+..|.++|+.|.+..++..... + ....|.. .+-.-+.+|+++.+++...|+ ..++|++|++..
T Consensus 31 a~~la~~Garv~v~dl~~~~A~----a-ta~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGIt 101 (256)
T KOG1200|consen 31 AQLLAKKGARVAVADLDSAAAE----A-TAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGIT 101 (256)
T ss_pred HHHHHhcCcEEEEeecchhhHH----H-HHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccc
Confidence 4567789999999988865431 1 1123322 234567899998777665443 469999999986
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.05 Score=46.52 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=50.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++++|+++|++-.+-.|+.. |...+.. ..|.+...-.+.+++.+.+.+.++++|+||+|+... ....|++|
T Consensus 22 vae~l~~~g~~~aLAgRs~~------kl~~l~~--~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~-~g~plv~a 92 (382)
T COG3268 22 VAEYLAREGLTAALAGRSSA------KLDALRA--SLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTR-YGEPLVAA 92 (382)
T ss_pred HHHHHHHcCCchhhccCCHH------HHHHHHH--hcCccccccCCCCHHHHHHHHhcceEEEeccccccc-cccHHHHH
Confidence 46888999988866677642 4333322 245566566666799999999999999999997521 12234444
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
|..+|
T Consensus 93 C~~~G 97 (382)
T COG3268 93 CAAAG 97 (382)
T ss_pred HHHhC
Confidence 44444
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.064 Score=42.40 Aligned_cols=58 Identities=21% Similarity=0.351 Sum_probs=35.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC--HHHHHHHhcCCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE--HKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d--~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
|+++++.+|++|+.+..+.+-. + ..+++++...-.+ .+.+.+.++.+|++||+++..+
T Consensus 35 lA~~~~~~Ga~V~li~g~~~~~--~----------p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 35 LAEEAARRGAEVTLIHGPSSLP--P----------PPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHTT-EEEEEE-TTS----------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred HHHHHHHCCCEEEEEecCcccc--c----------cccceEEEecchhhhhhhhccccCcceeEEEecchhh
Confidence 4788999999999999874321 1 3578777754322 3445555668899999999875
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.11 Score=46.51 Aligned_cols=75 Identities=23% Similarity=0.312 Sum_probs=51.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+++.|+++|++|++.+++..... .+.+..+...|++++.+|..| ..+.++|+||.+++... ...++.+
T Consensus 20 ~A~~l~~~G~~V~~~d~~~~~~~----~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g~~~---~~~~~~~ 87 (450)
T PRK14106 20 LAKFLKKLGAKVILTDEKEEDQL----KEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPGVPL---DSPPVVQ 87 (450)
T ss_pred HHHHHHHCCCEEEEEeCCchHHH----HHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCCCCC---CCHHHHH
Confidence 36789999999999998642210 011233445589999999876 34568999999887642 2346777
Q ss_pred HHHhCCcc
Q 026978 81 IKVAGNIK 88 (230)
Q Consensus 81 a~~ag~Vk 88 (230)
|++.| +.
T Consensus 88 a~~~~-i~ 94 (450)
T PRK14106 88 AHKKG-IE 94 (450)
T ss_pred HHHCC-Cc
Confidence 88877 54
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.15 Score=43.92 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=52.2
Q ss_pred HHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------------
Q 026978 4 ASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------------ 69 (230)
Q Consensus 4 ~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------------ 69 (230)
.|..++ .++++++++... . ++ ..|.+........++.+.+++.++++|+|+||++++..
T Consensus 37 ~l~~~~~~~el~L~Di~~~~---g-~a---~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~ 109 (323)
T PLN00106 37 LMKMNPLVSELHLYDIANTP---G-VA---ADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFN 109 (323)
T ss_pred HHHhCCCCCEEEEEecCCCC---e-eE---chhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHH
Confidence 344444 479999886611 1 10 12323233333445545556889999999999999964
Q ss_pred -ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 -QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 -~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
+....+++++++++.+ .++++
T Consensus 110 ~N~~i~~~i~~~i~~~~-p~aiv 131 (323)
T PLN00106 110 INAGIVKTLCEAVAKHC-PNALV 131 (323)
T ss_pred HHHHHHHHHHHHHHHHC-CCeEE
Confidence 2456788999999999 88876
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.16 Score=39.52 Aligned_cols=64 Identities=9% Similarity=0.149 Sum_probs=43.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~ 69 (230)
+++.|+++|++|.+..|+.... ++ ..+.+. ...+..+.+|++|.+++.+++ .++|++||++|..
T Consensus 32 ia~~l~~~G~~V~l~~r~~~~~---~~--~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~ 104 (169)
T PRK06720 32 TALLLAKQGAKVIVTDIDQESG---QA--TVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLY 104 (169)
T ss_pred HHHHHHHCCCEEEEEECCHHHH---HH--HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3678899999999999874321 01 111221 123567899999988877654 3689999998753
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.16 Score=42.93 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=45.6
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------------ 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------------ 69 (230)
+..|+++||+|++..|++.+. .+ .+...|++... +..++.+++|+||.+++..
T Consensus 16 A~~L~~aG~~v~v~~r~~~ka-----~~---~~~~~Ga~~a~-------s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g 80 (286)
T COG2084 16 AANLLKAGHEVTVYNRTPEKA-----AE---LLAAAGATVAA-------SPAEAAAEADVVITMLPDDAAVRAVLFGENG 80 (286)
T ss_pred HHHHHHCCCEEEEEeCChhhh-----hH---HHHHcCCcccC-------CHHHHHHhCCEEEEecCCHHHHHHHHhCccc
Confidence 678999999999999985431 11 12233554322 2345566677777666543
Q ss_pred -----------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 -----------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
..+..+.+.+++++.| . +|+
T Consensus 81 ~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G-~-~~l 117 (286)
T COG2084 81 LLEGLKPGAIVIDMSTISPETARELAAALAAKG-L-EFL 117 (286)
T ss_pred hhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcC-C-cEE
Confidence 2345677788888877 4 355
|
|
| >PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.18 Score=37.15 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=47.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|.+.|++|++.+-.... . ..|+.++.=|+.+++ .+.-+|+|++++.=.+. +-|..+++-|
T Consensus 29 A~~L~~~G~dV~~tDi~~~~------------a-~~g~~~v~DDif~P~--l~iY~~a~lIYSiRPP~--El~~~il~lA 91 (127)
T PF03686_consen 29 AKKLKERGFDVIATDINPRK------------A-PEGVNFVVDDIFNPN--LEIYEGADLIYSIRPPP--ELQPPILELA 91 (127)
T ss_dssp HHHHHHHS-EEEEE-SS-S-----------------STTEE---SSS----HHHHTTEEEEEEES--T--TSHHHHHHHH
T ss_pred HHHHHHcCCcEEEEECcccc------------c-ccCcceeeecccCCC--HHHhcCCcEEEEeCCCh--HHhHHHHHHH
Confidence 56788899999999865431 1 268999999999987 47788999999886544 5688999999
Q ss_pred HHhCCcceEe
Q 026978 82 KVAGNIKRFL 91 (230)
Q Consensus 82 ~~ag~Vkr~v 91 (230)
++.| ..-+|
T Consensus 92 ~~v~-adlii 100 (127)
T PF03686_consen 92 KKVG-ADLII 100 (127)
T ss_dssp HHHT--EEEE
T ss_pred HHhC-CCEEE
Confidence 9999 66655
|
; PDB: 2K4M_A. |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=93.81 E-value=1.2 Score=37.92 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHH--------cCCCEEEEeccccc
Q 026978 110 AYLEKKRIVRRAIEA--------AQIPYTFVSANLCG 138 (230)
Q Consensus 110 ~~~~~K~~~e~~l~~--------~gl~~tilr~g~~~ 138 (230)
.|..+|..++.+.+. .|+....|.||++.
T Consensus 192 ~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~ 228 (303)
T PLN02730 192 GMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG 228 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence 577899888776543 36788888888764
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.44 Score=39.34 Aligned_cols=80 Identities=14% Similarity=0.083 Sum_probs=57.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++.|...+..+++.+=...+.+ | ..+.+. .+.+-..+.+.|.+-++ ++|.||.+.++....-..|.++
T Consensus 18 a~~L~~~~~~~~~ss~t~~g~~-l--------~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~ 87 (257)
T COG2099 18 AKKLAAAPVDIILSSLTGYGAK-L--------AEQIGP-VRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARISQNAAR 87 (257)
T ss_pred HHHhhccCccEEEEEccccccc-c--------hhccCC-eeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHH
Confidence 4566666655555544433332 2 112233 66666778899999988 8899999998887888999999
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
+|++.| +..+.+
T Consensus 88 aake~g-ipy~r~ 99 (257)
T COG2099 88 AAKETG-IPYLRL 99 (257)
T ss_pred HHHHhC-CcEEEE
Confidence 999999 987764
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.44 Score=41.21 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=47.3
Q ss_pred CHHHHhhCCCeE---EEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHH
Q 026978 1 MVKASVSSGHKT---FVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEI 77 (230)
Q Consensus 1 lv~~Ll~~g~~V---~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~l 77 (230)
|++.|.++||++ ++++|..+..+ .+...+.++...|+.+. .++++|+||.+++. .....+
T Consensus 17 l~~lL~~~~hp~~~l~~l~s~~~~g~---------~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~---g~s~~~ 79 (334)
T PRK14874 17 MLNILEERNFPVDKLRLLASARSAGK---------ELSFKGKELKVEDLTTF-----DFSGVDIALFSAGG---SVSKKY 79 (334)
T ss_pred HHHHHHhCCCCcceEEEEEccccCCC---------eeeeCCceeEEeeCCHH-----HHcCCCEEEECCCh---HHHHHH
Confidence 467777878754 88888755332 12224566666677542 34699999999865 345667
Q ss_pred HHHHHHhCCcceEe
Q 026978 78 VHAIKVAGNIKRFL 91 (230)
Q Consensus 78 l~Aa~~ag~Vkr~v 91 (230)
.....++| + .+|
T Consensus 80 ~~~~~~~G-~-~VI 91 (334)
T PRK14874 80 APKAAAAG-A-VVI 91 (334)
T ss_pred HHHHHhCC-C-EEE
Confidence 77777788 5 555
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.25 Score=40.27 Aligned_cols=103 Identities=11% Similarity=-0.077 Sum_probs=49.8
Q ss_pred hhhHHHHHHHHHHhCCcce-Ee-ccc---ccc----cCCCCCCCCchhHHHH---HHHHHHHHHHHcCCCEEEEeccccc
Q 026978 71 FLDQLEIVHAIKVAGNIKR-FL-PSE---FGC----EEDKVRPLPPFEAYLE---KKRIVRRAIEAAQIPYTFVSANLCG 138 (230)
Q Consensus 71 ~~~~~~ll~Aa~~ag~Vkr-~v-~S~---~g~----~~~~~~~~~p~~~~~~---~K~~~e~~l~~~gl~~tilr~g~~~ 138 (230)
+..+..|.+|...+-.+.| +| .|. |-. ..++..+. -...++. .+++.....-......++||+|...
T Consensus 105 i~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~-qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVl 183 (315)
T KOG3019|consen 105 IRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVH-QGFDILSRLCLEWEGAALKANKDVRVALIRIGVVL 183 (315)
T ss_pred eeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccccc-CChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEE
Confidence 3567888999888754443 33 121 211 11111111 1123332 2333323332345889999998876
Q ss_pred hhhcc---cc---cCCCCCCCcEEEecCCCcccCCCCCChhhhhhh
Q 026978 139 AYFVN---VL---LRPFESHDDVVVYGSGEAKALPPPEDIPISIMH 178 (230)
Q Consensus 139 ~~~~~---~~---~~~~~~~~~~~i~g~G~~~~~~~~~~~~~~~~~ 178 (230)
+-... .+ +.+.- |+ -.|+|++.+.-++.+.+..+++
T Consensus 184 G~gGGa~~~M~lpF~~g~-GG---PlGsG~Q~fpWIHv~DL~~li~ 225 (315)
T KOG3019|consen 184 GKGGGALAMMILPFQMGA-GG---PLGSGQQWFPWIHVDDLVNLIY 225 (315)
T ss_pred ecCCcchhhhhhhhhhcc-CC---cCCCCCeeeeeeehHHHHHHHH
Confidence 53221 11 12211 12 2688998876666654444333
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.087 Score=40.55 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=36.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|+++||+|+++.|+. ++.+ .+...|++.. +++.++++++|+||.++..
T Consensus 16 ~a~~L~~~g~~v~~~d~~~------~~~~---~~~~~g~~~~-------~s~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 16 MARNLAKAGYEVTVYDRSP------EKAE---ALAEAGAEVA-------DSPAEAAEQADVVILCVPD 67 (163)
T ss_dssp HHHHHHHTTTEEEEEESSH------HHHH---HHHHTTEEEE-------SSHHHHHHHBSEEEE-SSS
T ss_pred HHHHHHhcCCeEEeeccch------hhhh---hhHHhhhhhh-------hhhhhHhhcccceEeeccc
Confidence 4678999999999999973 3433 3444565543 2455667778999999875
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.61 Score=41.31 Aligned_cols=72 Identities=11% Similarity=0.006 Sum_probs=51.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++++|.++|++|++++.+.. + .....|..++.||.+|.+.|.+| ++.++.|+.+... ......++.
T Consensus 255 v~~~L~~~g~~vvVId~d~~-----~------~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~d--D~~Nl~ivL 321 (393)
T PRK10537 255 TYLGLRQRGQAVTVIVPLGL-----E------HRLPDDADLIPGDSSDSAVLKKAGAARARAILALRDN--DADNAFVVL 321 (393)
T ss_pred HHHHHHHCCCCEEEEECchh-----h------hhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCCC--hHHHHHHHH
Confidence 36778889999999986521 1 11246889999999999999886 6788999977643 233445566
Q ss_pred HHHHhC
Q 026978 80 AIKVAG 85 (230)
Q Consensus 80 Aa~~ag 85 (230)
++|+.+
T Consensus 322 ~ar~l~ 327 (393)
T PRK10537 322 AAKEMS 327 (393)
T ss_pred HHHHhC
Confidence 777765
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.19 Score=42.62 Aligned_cols=62 Identities=19% Similarity=0.341 Sum_probs=44.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-h---cCCCeEEEEecCCCHH----HHHHHhcCCC--EEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTIIEGELDEHK----KIVSILKEVD--VVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l---~~~gv~vv~gD~~d~~----~L~~al~g~D--~Vi~~~~~~ 69 (230)
+++|.++|++|.+++|+.+ |++.++. + ..-.+.++..|+++.+ .+.+.+.+.| ++|+++|..
T Consensus 66 A~eLAkrG~nvvLIsRt~~------KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 66 ARELAKRGFNVVLISRTQE------KLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGMS 137 (312)
T ss_pred HHHHHHcCCEEEEEeCCHH------HHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEEeccccc
Confidence 5789999999999999854 4333321 2 1233678999998655 4777788765 689999875
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.89 E-value=3.1 Score=34.90 Aligned_cols=132 Identities=13% Similarity=0.112 Sum_probs=76.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh--cCCCeEEEEecCCCHHHHHHHh--------cCCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIEGELDEHKKIVSIL--------KEVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l--~~~gv~vv~gD~~d~~~L~~al--------~g~D~Vi~~~~~~~ 70 (230)
++.+|.+.|.+|.+..|+..... +-.+.+... ....+..+.+|+++.+...+++ -..|++|+.++...
T Consensus 24 ia~~la~~Ga~v~i~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 24 IALLLAKAGAKVVITGRSEERLE--ETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALG 101 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCC
Confidence 46789999999999999865321 001111111 1234778999999776544432 24799999998642
Q ss_pred --------------------hh-hHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 --------------------FL-DQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 --------------------~~-~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+. ....+..+|. +.+ -..++. |. .|.... . .+...|..+|..++++.+
T Consensus 102 ~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~-~---~~~~~Y~~sK~al~~ltr 176 (270)
T KOG0725|consen 102 LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPG-P---GSGVAYGVSKAALLQLTR 176 (270)
T ss_pred CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCC-C---CCcccchhHHHHHHHHHH
Confidence 12 2233333333 222 234443 22 222111 0 011356689988888766
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+..-.|.||.+.-
T Consensus 177 ~lA~El~~~gIRvN~v~PG~i~T 199 (270)
T KOG0725|consen 177 SLAKELAKHGIRVNSVSPGLVKT 199 (270)
T ss_pred HHHHHHhhcCcEEEEeecCcEeC
Confidence 4 688888899987654
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.28 Score=38.38 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=45.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC---CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE---VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g---~D~Vi~~~~~~ 69 (230)
+|..|.+.|.+|+++.|+... .+.|-.....-++-+.+|+.+.+.+.+++-. +|.+++.++..
T Consensus 23 ~v~~La~aGA~ViAvaR~~a~------L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA 88 (245)
T KOG1207|consen 23 IVLSLAKAGAQVIAVARNEAN------LLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVA 88 (245)
T ss_pred HHHHHHhcCCEEEEEecCHHH------HHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccchhh
Confidence 477899999999999998532 2222222223378899999999999998874 48888888754
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.43 Score=41.19 Aligned_cols=57 Identities=18% Similarity=0.095 Sum_probs=32.6
Q ss_pred CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 9 GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 9 g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+.+|++++|+..... . +.+. ..+.+ ......+|+.+..++.++++|+|+|||+++..
T Consensus 33 ~~el~L~D~~~~~~~-~-~g~~-~Dl~d-~~~~~~~~~~~~~~~~~~l~~aDiVI~tAG~~ 89 (325)
T cd01336 33 PVILHLLDIPPALKA-L-EGVV-MELQD-CAFPLLKSVVATTDPEEAFKDVDVAILVGAMP 89 (325)
T ss_pred CcEEEEEEcCCcccc-c-ccee-eehhh-ccccccCCceecCCHHHHhCCCCEEEEeCCcC
Confidence 458999999654211 0 0000 01110 01012335544567889999999999999975
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.27 Score=43.32 Aligned_cols=76 Identities=13% Similarity=0.177 Sum_probs=46.4
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|++.|+++ +++|+.++|..+..+ .+......+..+|+.+.+++..+ ++++|+||.+++. ....+++
T Consensus 54 LlrlL~~hP~~el~~l~s~~saG~---------~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~---~~s~~i~ 121 (381)
T PLN02968 54 VRRLLANHPDFEITVMTADRKAGQ---------SFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH---GTTQEII 121 (381)
T ss_pred HHHHHHhCCCCeEEEEEChhhcCC---------CchhhCccccCccccceecCCHHHhcCCCEEEEcCCH---HHHHHHH
Confidence 35666666 579999998654322 11112223444555444444433 6899999999866 4667777
Q ss_pred HHHHHhCCcceEe
Q 026978 79 HAIKVAGNIKRFL 91 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v 91 (230)
.++ ++| .++|
T Consensus 122 ~~~-~~g--~~VI 131 (381)
T PLN02968 122 KAL-PKD--LKIV 131 (381)
T ss_pred HHH-hCC--CEEE
Confidence 776 467 4566
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.27 Score=40.26 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=64.1
Q ss_pred EEEEecCCCHHHHHHHhc--CCCEEEEcCCC------C--------ChhhHHHHHHHHHHhCCcceEeccc---ccccCC
Q 026978 40 TIIEGELDEHKKIVSILK--EVDVVISTVAY------P--------QFLDQLEIVHAIKVAGNIKRFLPSE---FGCEED 100 (230)
Q Consensus 40 ~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~------~--------~~~~~~~ll~Aa~~ag~Vkr~v~S~---~g~~~~ 100 (230)
.++..|+.|...|.+++- .+|-+||..+. . ++.+.-|+++.|++.. .+-||||. ||.+..
T Consensus 90 PyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSP 168 (366)
T KOG2774|consen 90 PYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSP 168 (366)
T ss_pred CchhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCC
Confidence 477889999999999876 46999986542 1 4678999999999998 99999986 554432
Q ss_pred C-CCC----CCchhHHHHHHHHHHH---HHH-HcCCCEEEEe
Q 026978 101 K-VRP----LPPFEAYLEKKRIVRR---AIE-AAQIPYTFVS 133 (230)
Q Consensus 101 ~-~~~----~~p~~~~~~~K~~~e~---~l~-~~gl~~tilr 133 (230)
+ +.+ ..|..-|.-+|..+|- +.. ..|+++..+|
T Consensus 169 RNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~r 210 (366)
T KOG2774|consen 169 RNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMR 210 (366)
T ss_pred CCCCCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecc
Confidence 2 111 1343345677776653 222 2588888777
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.34 Score=41.00 Aligned_cols=64 Identities=9% Similarity=0.118 Sum_probs=44.1
Q ss_pred HHHHhhCCCe-EEEEEcCCCCCCCcchHhhhh-hhcC--CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHK-TFVYARPVTQNSRPSKLEIHK-EFQG--IGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~-~l~~--~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+.+|.+.|.. |+++.|+... .+|++.+. .+.. .++.+...|+.|.+++.++++.+|+||++.+.
T Consensus 142 a~~La~~G~~~V~I~~R~~~~---~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 142 QVQCALDGAKEITIFNIKDDF---YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLV 209 (289)
T ss_pred HHHHHHCCCCEEEEEeCCchH---HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCC
Confidence 5678889986 9999997521 12322221 2221 23556778999888898889999999999864
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.28 Score=42.07 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=39.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++.|+++||+|++..|+.+... +++.+ .+...|++.. ++..++.+++|+||.+++..
T Consensus 35 MArnLlkAGheV~V~Drnrsa~e-~e~~e---~LaeaGA~~A-------aS~aEAAa~ADVVIL~LPd~ 92 (341)
T TIGR01724 35 MAIEFAMAGHDVVLAEPNREFMS-DDLWK---KVEDAGVKVV-------SDDKEAAKHGEIHVLFTPFG 92 (341)
T ss_pred HHHHHHHCCCEEEEEeCChhhhh-hhhhH---HHHHCCCeec-------CCHHHHHhCCCEEEEecCCH
Confidence 36789999999999998754221 11222 3445576652 24568888999999998854
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.75 Score=40.86 Aligned_cols=55 Identities=16% Similarity=0.302 Sum_probs=40.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~ 69 (230)
|+++|.++|++|+++.|+.+.. . ..++ ...|+++.+++.++++ .+|++||+++..
T Consensus 220 iA~~l~~~Ga~V~~v~~~~~~~-----------~-~~~~--~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 220 LARAAARRGADVTLVSGPVNLP-----------T-PAGV--KRIDVESAQEMLDAVLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHHHHCCCEEEEeCCCcccc-----------C-CCCc--EEEccCCHHHHHHHHHHhcCCCCEEEEccccc
Confidence 4788999999999999875311 1 1233 4568999888777764 689999999875
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=90.77 E-value=1.2 Score=35.79 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=49.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|++.|.+|++++.+.+ + .+..+. ..+++++.+++... -+++++.||.+.+.. +....+...
T Consensus 25 ~~~Ll~~ga~VtVvsp~~~----~----~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d~--~ln~~i~~~ 89 (205)
T TIGR01470 25 ARLLLKAGAQLRVIAEELE----S----ELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDDE--ELNRRVAHA 89 (205)
T ss_pred HHHHHHCCCEEEEEcCCCC----H----HHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCCH--HHHHHHHHH
Confidence 5689999999999986543 1 122332 24799999998732 268899999876553 345678889
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
|++.|
T Consensus 90 a~~~~ 94 (205)
T TIGR01470 90 ARARG 94 (205)
T ss_pred HHHcC
Confidence 98888
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=90.70 E-value=1.5 Score=40.78 Aligned_cols=89 Identities=16% Similarity=0.235 Sum_probs=61.2
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhh---cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHH
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLE 76 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l---~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ 76 (230)
|+..|+..| .++++++-+..... -.+...+.+. ..+++.+...+....+++.+.++++|.|++++..........
T Consensus 144 lv~sL~~sG~~~I~~vd~D~v~SN-lnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~DiVi~vsDdy~~~~Lr~ 222 (637)
T TIGR03693 144 LVRSLIDSGFPRFHAIVTDAEEHA-LDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPADWVLYVSDNGDIDDLHA 222 (637)
T ss_pred HHHHHHhcCCCcEEEEeccccchh-hhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCcEEEEECCCCChHHHHH
Confidence 466788899 46777744432211 0111111111 146777777787888999999999999999998777777888
Q ss_pred HHHHHHHhCCcceEec
Q 026978 77 IVHAIKVAGNIKRFLP 92 (230)
Q Consensus 77 ll~Aa~~ag~Vkr~v~ 92 (230)
+-++|.+.| +.+++
T Consensus 223 lN~acvkeg--k~~IP 236 (637)
T TIGR03693 223 LHAFCKEEG--KGFIP 236 (637)
T ss_pred HHHHHHHcC--CCeEE
Confidence 889999988 55664
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.18 Score=42.59 Aligned_cols=53 Identities=34% Similarity=0.532 Sum_probs=36.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++..|++.||.|++..|+.. |.+ .|+..|+++.. .+.+ ..+.+|+||.+++..
T Consensus 50 M~~nLik~G~kVtV~dr~~~------k~~---~f~~~Ga~v~~----sPae---Vae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 50 MVSNLIKAGYKVTVYDRTKD------KCK---EFQEAGARVAN----SPAE---VAEDSDVVITMVPNP 102 (327)
T ss_pred HHHHHHHcCCEEEEEeCcHH------HHH---HHHHhchhhhC----CHHH---HHhhcCEEEEEcCCh
Confidence 36789999999999999853 333 45566776532 3444 445688888888764
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=90.31 E-value=0.84 Score=40.59 Aligned_cols=70 Identities=24% Similarity=0.303 Sum_probs=47.1
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++++|.++| ..|++..|+. +|++.|.. .-| +++...+.+...+..+|+||++.+..+.--....++
T Consensus 193 va~~L~~~g~~~i~IaNRT~------erA~~La~--~~~-----~~~~~l~el~~~l~~~DvVissTsa~~~ii~~~~ve 259 (414)
T COG0373 193 VAKHLAEKGVKKITIANRTL------ERAEELAK--KLG-----AEAVALEELLEALAEADVVISSTSAPHPIITREMVE 259 (414)
T ss_pred HHHHHHhCCCCEEEEEcCCH------HHHHHHHH--HhC-----CeeecHHHHHHhhhhCCEEEEecCCCccccCHHHHH
Confidence 367899999 7889999974 35544322 223 555667789999999999999988765333333344
Q ss_pred HHHH
Q 026978 80 AIKV 83 (230)
Q Consensus 80 Aa~~ 83 (230)
.+.+
T Consensus 260 ~a~~ 263 (414)
T COG0373 260 RALK 263 (414)
T ss_pred HHHh
Confidence 4433
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=90.24 E-value=1.3 Score=40.53 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=50.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
+++.|+++||+|++..|+.+ |.+.+.. ....|++.+. -..+++++.+.++.+|+||.++...
T Consensus 21 mA~nL~~~G~~V~V~NRt~~------k~~~l~~~~~~~Ga~~~~-~a~s~~e~v~~l~~~dvIi~~v~~~~aV~~Vi~gl 93 (493)
T PLN02350 21 LALNIAEKGFPISVYNRTTS------KVDETVERAKKEGNLPLY-GFKDPEDFVLSIQKPRSVIILVKAGAPVDQTIKAL 93 (493)
T ss_pred HHHHHHhCCCeEEEECCCHH------HHHHHHHhhhhcCCcccc-cCCCHHHHHhcCCCCCEEEEECCCcHHHHHHHHHH
Confidence 46789999999999999743 4333322 1111432110 1235666666666788888776543
Q ss_pred ----------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 ----------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
....+..+.+.+++.| +. |+
T Consensus 94 ~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~G-i~-fl 129 (493)
T PLN02350 94 SEYMEPGDCIIDGGNEWYENTERRIKEAAEKG-LL-YL 129 (493)
T ss_pred HhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC-Ce-EE
Confidence 1245677777788888 54 76
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.20 E-value=1.1 Score=38.40 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=47.3
Q ss_pred CCCeEEEEEcCCCCCCCcchHhhhhhhcCCC-eEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-------------hhh
Q 026978 8 SGHKTFVYARPVTQNSRPSKLEIHKEFQGIG-VTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------------FLD 73 (230)
Q Consensus 8 ~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~g-v~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------------~~~ 73 (230)
.++++++++|+.... .+.+ .+.+.+ ...+.+ .+.+++.++++++|+||.++|... ...
T Consensus 26 ~~~el~L~d~~~~~~-----g~al-Dl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i 97 (312)
T PRK05086 26 AGSELSLYDIAPVTP-----GVAV-DLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGI 97 (312)
T ss_pred CccEEEEEecCCCCc-----ceeh-hhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 357889998874321 0001 232212 223444 233456678899999999999742 235
Q ss_pred HHHHHHHHHHhCCcceEe
Q 026978 74 QLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr~v 91 (230)
.+++++++++.+ .+++|
T Consensus 98 ~~~ii~~i~~~~-~~~iv 114 (312)
T PRK05086 98 VKNLVEKVAKTC-PKACI 114 (312)
T ss_pred HHHHHHHHHHhC-CCeEE
Confidence 678899999998 88876
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=90.13 E-value=1.3 Score=38.36 Aligned_cols=72 Identities=11% Similarity=0.069 Sum_probs=46.4
Q ss_pred CHHHHhhCCCeEEE---EEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHH
Q 026978 1 MVKASVSSGHKTFV---YARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEI 77 (230)
Q Consensus 1 lv~~Ll~~g~~V~~---l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~l 77 (230)
|++.|.+++|++.. ++|..+..+ .+...|.+++..|+. ...++++|+||.+++.. ....+
T Consensus 15 Li~lL~~~~hp~~~l~~~as~~~~g~---------~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~---~s~~~ 77 (339)
T TIGR01296 15 MLKILEERNFPIDKLVLLASDRSAGR---------KVTFKGKELEVNEAK-----IESFEGIDIALFSAGGS---VSKEF 77 (339)
T ss_pred HHHHHHhCCCChhhEEEEeccccCCC---------eeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHH---HHHHH
Confidence 46777788887654 446644322 122345677777774 23458999999998763 45666
Q ss_pred HHHHHHhCCcceEe
Q 026978 78 VHAIKVAGNIKRFL 91 (230)
Q Consensus 78 l~Aa~~ag~Vkr~v 91 (230)
...+.++| + ++|
T Consensus 78 a~~~~~~G-~-~VI 89 (339)
T TIGR01296 78 APKAAKCG-A-IVI 89 (339)
T ss_pred HHHHHHCC-C-EEE
Confidence 77777788 6 466
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK09287 6-phosphogluconate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=90.06 E-value=1.9 Score=38.99 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=49.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
+++.|+++||+|++..|+.+ |.+.+..... .|++. ..+++++.+.++.+|+||.++...
T Consensus 5 mA~nL~~~G~~V~v~nrt~~------~~~~l~~~~g~~~g~~~----~~s~~e~v~~l~~~~~Ii~mv~~g~~v~~Vi~~ 74 (459)
T PRK09287 5 LALNIASHGYTVAVYNRTPE------KTDEFLAEEGKGKKIVP----AYTLEEFVASLEKPRKILLMVKAGAPVDAVIEQ 74 (459)
T ss_pred HHHHHHhCCCeEEEECCCHH------HHHHHHHhhCCCCCeEe----eCCHHHHHhhCCCCCEEEEECCCchHHHHHHHH
Confidence 46789999999999999743 4333322101 12332 235666666666778877776543
Q ss_pred -----------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 -----------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
....+....+.+++.| +. ||
T Consensus 75 l~~~l~~GdiiID~gn~~~~~t~~~~~~l~~~G-i~-fv 111 (459)
T PRK09287 75 LLPLLEKGDIIIDGGNSNYKDTIRREKELAEKG-IH-FI 111 (459)
T ss_pred HHhcCCCCCEEEECCCCCHHHHHHHHHHHHhcC-Ce-EE
Confidence 1245666777888888 54 76
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.4 Score=35.68 Aligned_cols=59 Identities=25% Similarity=0.232 Sum_probs=38.0
Q ss_pred HHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
+.+|.+.|.. |+++.|+. +|++.+...- .+..+-..++. ++.+.+..+|+||++.+...
T Consensus 28 ~~~L~~~g~~~i~i~nRt~------~ra~~l~~~~-~~~~~~~~~~~---~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 28 AAALAALGAKEITIVNRTP------ERAEALAEEF-GGVNIEAIPLE---DLEEALQEADIVINATPSGM 87 (135)
T ss_dssp HHHHHHTTSSEEEEEESSH------HHHHHHHHHH-TGCSEEEEEGG---GHCHHHHTESEEEE-SSTTS
T ss_pred HHHHHHcCCCEEEEEECCH------HHHHHHHHHc-CccccceeeHH---HHHHHHhhCCeEEEecCCCC
Confidence 5788899976 99999973 4555543321 22223333443 35577889999999998764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=89.73 E-value=0.43 Score=38.96 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=35.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-------hcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-------LKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-------l~g~D~Vi~~~~~~ 69 (230)
|+++|+++|++|+++.|..... ... ...+|+.|.+++.+. +.++|++||+++..
T Consensus 31 IA~~la~~Ga~Vvlv~~~~~l~-------------~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 31 ITETFLSAGHEVTLVTTKRALK-------------PEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred HHHHHHHCCCEEEEEcChhhcc-------------ccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 5788999999999987642210 101 123577766555543 34689999999864
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=89.51 E-value=1.3 Score=39.09 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=41.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcc-------hHhhhh-hhcCCC--eEEEEecCCCHHHHHHHhc-------CCCEEEE
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPS-------KLEIHK-EFQGIG--VTIIEGELDEHKKIVSILK-------EVDVVIS 64 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~-------k~~~l~-~l~~~g--v~vv~gD~~d~~~L~~al~-------g~D~Vi~ 64 (230)
+++| ++|.+|.++++...... .. ..+.+. .++..| +..+.+|+++.+++.++++ ++|+|||
T Consensus 60 A~al-~~GA~Vi~v~~~~~~~~-~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVn 137 (398)
T PRK13656 60 AAAF-GAGADTLGVFFEKPGTE-KKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVY 137 (398)
T ss_pred HHHH-HcCCeEEEEecCcchhh-hcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5677 89999999986432110 00 000111 122234 5678999999888766544 5799999
Q ss_pred cCCCC
Q 026978 65 TVAYP 69 (230)
Q Consensus 65 ~~~~~ 69 (230)
+++..
T Consensus 138 SaA~~ 142 (398)
T PRK13656 138 SLASP 142 (398)
T ss_pred CCccC
Confidence 99865
|
|
| >PRK08462 biotin carboxylase; Validated | Back alignment and domain information |
|---|
Probab=89.47 E-value=3 Score=37.42 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=49.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEe-------cCCCHHHHHHHhc--CCCEEEEcCCCCCh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEG-------ELDEHKKIVSILK--EVDVVISTVAYPQF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~g-------D~~d~~~L~~al~--g~D~Vi~~~~~~~~ 71 (230)
+++++.+.|+.|+++........ | .++... +.+.. ++.|.+.|.++++ ++|+|+-..+..
T Consensus 19 ~~~~~~~~G~~~v~~~~~~d~~~-~-------~~~~ad-~~~~~~~~~~~~~y~~~~~l~~~~~~~~~D~i~pg~g~l-- 87 (445)
T PRK08462 19 AIRTIQEMGKEAIAIYSTADKDA-L-------YLKYAD-AKICIGGAKSSESYLNIPAIISAAEIFEADAIFPGYGFL-- 87 (445)
T ss_pred HHHHHHHcCCCEEEEechhhcCC-c-------hhhhCC-EEEEeCCCchhcccCCHHHHHHHHHHcCCCEEEECCCcc--
Confidence 46778888999998875543321 1 011111 22222 7788888888876 789999887532
Q ss_pred hhHHHHHHHHHHhCCcceEec
Q 026978 72 LDQLEIVHAIKVAGNIKRFLP 92 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~v~ 92 (230)
.....+.+.|++.| ++-+.+
T Consensus 88 se~~~~a~~~e~~G-i~~~g~ 107 (445)
T PRK08462 88 SENQNFVEICSHHN-IKFIGP 107 (445)
T ss_pred ccCHHHHHHHHHCC-CeEECc
Confidence 12245667788888 664333
|
|
| >COG3963 Phospholipid N-methyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.30 E-value=2.7 Score=32.76 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=56.9
Q ss_pred CHHHHhhCCC---eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--hhh
Q 026978 1 MVKASVSSGH---KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ--FLD 73 (230)
Q Consensus 1 lv~~Ll~~g~---~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~--~~~ 73 (230)
+.+++|++|+ ++.++--+ |+-...|..+ .+++.++.||..|.+.-....+| +|+||+++...+ ...
T Consensus 62 ~TkaIL~~gv~~~~L~~iE~~------~dF~~~L~~~-~p~~~ii~gda~~l~~~l~e~~gq~~D~viS~lPll~~P~~~ 134 (194)
T COG3963 62 ITKAILSRGVRPESLTAIEYS------PDFVCHLNQL-YPGVNIINGDAFDLRTTLGEHKGQFFDSVISGLPLLNFPMHR 134 (194)
T ss_pred hHHHHHhcCCCccceEEEEeC------HHHHHHHHHh-CCCccccccchhhHHHHHhhcCCCeeeeEEeccccccCcHHH
Confidence 4578899886 46666443 2222233333 47899999999887644455555 499999998765 456
Q ss_pred HHHHHHHHHHh-CCcce-Eeccccc
Q 026978 74 QLEIVHAIKVA-GNIKR-FLPSEFG 96 (230)
Q Consensus 74 ~~~ll~Aa~~a-g~Vkr-~v~S~~g 96 (230)
...+++.+... + .++ +|.-.||
T Consensus 135 ~iaile~~~~rl~-~gg~lvqftYg 158 (194)
T COG3963 135 RIAILESLLYRLP-AGGPLVQFTYG 158 (194)
T ss_pred HHHHHHHHHHhcC-CCCeEEEEEec
Confidence 67778876652 3 444 5544576
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.70 E-value=2.1 Score=38.89 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=46.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
++..|+++||+|++.+|+.+ +.+.+.. ....|..+.. ..+.+++.+.++.+|+||.++...
T Consensus 16 lA~nL~~~G~~V~v~dr~~~------~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~v~~~~~v~~vi~~l 87 (470)
T PTZ00142 16 LALNIASRGFKISVYNRTYE------KTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILLIKAGEAVDETIDNL 87 (470)
T ss_pred HHHHHHHCCCeEEEEeCCHH------HHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEEeCChHHHHHHHHHH
Confidence 46789999999999999753 3332222 1112432211 235555555555678666664432
Q ss_pred ----------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 ----------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
....+....+.+++.| +. |+
T Consensus 88 ~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~G-i~-fl 123 (470)
T PTZ00142 88 LPLLEKGDIIIDGGNEWYLNTERRIKRCEEKG-IL-YL 123 (470)
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHHHHcC-Ce-EE
Confidence 1234566677777778 54 66
|
|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=88.70 E-value=4.5 Score=35.02 Aligned_cols=71 Identities=15% Similarity=0.227 Sum_probs=44.9
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
+.++.+.|++|.+++.++.. |.. .+ .-+.+.+|++|.+.+.+..+.+|+|.... .++. ...++.+
T Consensus 15 ~~aa~~lG~~v~~~d~~~~~---p~~-----~~---ad~~~~~~~~d~~~i~~~a~~~dvit~e~--e~i~--~~~l~~l 79 (352)
T TIGR01161 15 ALAARPLGIKVHVLDPDANS---PAV-----QV---ADHVVLAPFFDPAAIRELAESCDVITFEF--EHVD--VEALEKL 79 (352)
T ss_pred HHHHHHcCCEEEEECCCCCC---Chh-----Hh---CceeEeCCCCCHHHHHHHHhhCCEEEeCc--CcCC--HHHHHHH
Confidence 45677789999999876543 211 11 12345789999999999999999874322 2221 1234555
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
.+.| +.
T Consensus 80 ~~~g-~~ 85 (352)
T TIGR01161 80 EARG-VK 85 (352)
T ss_pred HhCC-Ce
Confidence 5667 54
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=88.64 E-value=1.2 Score=38.27 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=49.2
Q ss_pred HhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHh
Q 026978 5 SVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVA 84 (230)
Q Consensus 5 Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~a 84 (230)
..+-|++|++++|+.++ |.+. ++..|++++..-..|++.+.++.+-.|.++|++..........++..+|..
T Consensus 201 AKAMG~rV~vis~~~~k-----keea---~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~ 272 (360)
T KOG0023|consen 201 AKAMGMRVTVISTSSKK-----KEEA---IKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVN 272 (360)
T ss_pred HHHhCcEEEEEeCCchh-----HHHH---HHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcC
Confidence 34569999999998643 3333 445689988766668888777777666666666533223445667777877
Q ss_pred C
Q 026978 85 G 85 (230)
Q Consensus 85 g 85 (230)
|
T Consensus 273 G 273 (360)
T KOG0023|consen 273 G 273 (360)
T ss_pred C
Confidence 7
|
|
| >PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes | Back alignment and domain information |
|---|
Probab=88.35 E-value=2.8 Score=32.40 Aligned_cols=93 Identities=17% Similarity=0.262 Sum_probs=54.7
Q ss_pred HHHHhhCCCeEEEEE-cCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----h-hhHH
Q 026978 2 VKASVSSGHKTFVYA-RPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ----F-LDQL 75 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~-R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~----~-~~~~ 75 (230)
++.|.++|++|+++. .+..... ++-...++.++..|++++..+- ...+...++..|+||.++-... + ....
T Consensus 45 AR~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~dlIIDal~G~G~~~~l~~~~~ 121 (169)
T PF03853_consen 45 ARHLANRGYNVTVYLVGPPEKLS-EDAKQQLEILKKMGIKIIELDS--DEDLSEALEPADLIIDALFGTGFSGPLRGPIA 121 (169)
T ss_dssp HHHHHHTTCEEEEEEEESSSSTS-HHHHHHHHHHHHTT-EEESSCC--GSGGGHHGSCESEEEEES-STTGGSCGSTCHH
T ss_pred HHHHHHCCCeEEEEEEeccccCC-HHHHHHHHHHHhcCCcEeeccc--cchhhcccccccEEEEecccCCCCCCcCHHHH
Confidence 678889999999843 2222211 2222334455667877765433 3334555669999998876553 2 2467
Q ss_pred HHHHHHHHhCCcceE---eccccccc
Q 026978 76 EIVHAIKVAGNIKRF---LPSEFGCE 98 (230)
Q Consensus 76 ~ll~Aa~~ag~Vkr~---v~S~~g~~ 98 (230)
.+++.+.+.+ ...+ +||.+..+
T Consensus 122 ~~i~~iN~~~-~~viAiDiPSGl~~d 146 (169)
T PF03853_consen 122 ELIDWINASR-APVIAIDIPSGLDAD 146 (169)
T ss_dssp HHHHHHHHHC-SEEEEESS-TTCBTT
T ss_pred HHHHHHhccC-CcEEEecCCCCccCC
Confidence 8888888887 5533 25766443
|
In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A .... |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=87.99 E-value=2.9 Score=35.47 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=16.2
Q ss_pred CHHHHhhCCCeEEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPV 19 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~ 19 (230)
+++.|++.||+|.+.+|+.
T Consensus 15 mA~~L~~~g~~v~v~dr~~ 33 (301)
T PRK09599 15 MARRLLRGGHEVVGYDRNP 33 (301)
T ss_pred HHHHHHHCCCeEEEEECCH
Confidence 3678999999999999974
|
|
| >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=87.96 E-value=2.9 Score=37.53 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=52.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|+++|++|.+.++...... + .....|...|+++..+.-.+.+.+...+++.|.||...+... ...++.+|
T Consensus 16 a~~l~~~G~~V~~~D~~~~~~~---~-~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~---~~~~~~~a 88 (459)
T PRK02705 16 ARLLKAQGWEVVVSDRNDSPEL---L-ERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW---DHPTLVEL 88 (459)
T ss_pred HHHHHHCCCEEEEECCCCchhh---H-HHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC---CCHHHHHH
Confidence 4567889999999997754221 1 011124456899988765566666667888999998766542 23467777
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
++.| ++
T Consensus 89 ~~~~-i~ 94 (459)
T PRK02705 89 RERG-IE 94 (459)
T ss_pred HHcC-Cc
Confidence 7777 55
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=87.76 E-value=0.81 Score=34.45 Aligned_cols=57 Identities=23% Similarity=0.352 Sum_probs=41.8
Q ss_pred CCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 8 SGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 8 ~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
+|-+|+++.|+....+ | .-..|...|+++..++-.. .++.++++.+|+||++++..+
T Consensus 27 ~gk~v~VvGrs~~vG~-p----la~lL~~~gatV~~~~~~t-~~l~~~v~~ADIVvsAtg~~~ 83 (140)
T cd05212 27 DGKKVLVVGRSGIVGA-P----LQCLLQRDGATVYSCDWKT-IQLQSKVHDADVVVVGSPKPE 83 (140)
T ss_pred CCCEEEEECCCchHHH-H----HHHHHHHCCCEEEEeCCCC-cCHHHHHhhCCEEEEecCCCC
Confidence 4678999999875432 2 1112446789998888654 358889999999999998764
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=87.60 E-value=1.5 Score=37.13 Aligned_cols=56 Identities=16% Similarity=0.167 Sum_probs=38.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++.|++.||+|.+..|+.. +.+. +...|+.. ..+.+++.+.++.+|+|+.++...
T Consensus 15 la~~L~~~g~~V~~~dr~~~------~~~~---l~~~g~~~----~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 15 IVRRLAKRGHDCVGYDHDQD------AVKA---MKEDRTTG----VANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHH---HHHcCCcc----cCCHHHHHhhcCCCCEEEEEcCch
Confidence 46788899999999999743 3332 32334332 245677777788899999888764
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=87.35 E-value=6.9 Score=34.14 Aligned_cols=70 Identities=7% Similarity=0.149 Sum_probs=46.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
++.++.+.|++|.+++.+... |.. .+ --+.+.+|+.|.+.+.+.++ ++|+|+........ ..+
T Consensus 14 l~~aa~~~G~~v~~~d~~~~~---~~~-----~~---ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~e~v~~----~~~ 78 (380)
T TIGR01142 14 VAIEAQRLGVEVIAVDRYANA---PAM-----QV---AHRSYVINMLDGDALRAVIEREKPDYIVPEIEAIAT----DAL 78 (380)
T ss_pred HHHHHHHcCCEEEEEeCCCCC---chh-----hh---CceEEEcCCCCHHHHHHHHHHhCCCEEEeccCccCH----HHH
Confidence 356788899999999987543 210 11 12456779999999999888 89999865443221 223
Q ss_pred HHHHHhC
Q 026978 79 HAIKVAG 85 (230)
Q Consensus 79 ~Aa~~ag 85 (230)
+.+.+.|
T Consensus 79 ~~l~~~g 85 (380)
T TIGR01142 79 FELEKEG 85 (380)
T ss_pred HHHHhcC
Confidence 3455566
|
This enzyme is an alternative to PurN (TIGR00639) |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=86.91 E-value=2.7 Score=32.91 Aligned_cols=62 Identities=15% Similarity=0.270 Sum_probs=47.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++.|.++|.+|..++-+.|+.. +.+ +++ ..++-+...|++..+++..|+. ..|+.++|++..
T Consensus 26 aerlakqgasv~lldlp~skg~--~va---kel-g~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 26 AERLAKQGASVALLDLPQSKGA--DVA---KEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIA 94 (260)
T ss_pred HHHHHhcCceEEEEeCCcccch--HHH---HHh-CCceEEeccccCcHHHHHHHHHHHHhhccceeeeeecccee
Confidence 4678899999999987766542 222 234 3567889999999999988876 359999999875
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=86.75 E-value=2 Score=38.10 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=39.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHH-HHHh----cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKI-VSIL----KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L-~~al----~g~D~Vi~~~~~~ 69 (230)
++++|..+|++|+++.++.+... ..++ ...|+++.+++ ..++ .++|++|++++..
T Consensus 217 ~a~~~~~~Ga~V~~~~g~~~~~~------------~~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 217 LAEAAYKRGADVTLITGPVSLLT------------PPGV--KSIKVSTAEEMLEAALNELAKDFDIFISAAAVA 276 (390)
T ss_pred HHHHHHHCCCEEEEeCCCCccCC------------CCCc--EEEEeccHHHHHHHHHHhhcccCCEEEEccccc
Confidence 46889999999999987654211 1233 45788888777 4344 3689999999976
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
Probab=86.60 E-value=5.5 Score=35.82 Aligned_cols=77 Identities=10% Similarity=0.084 Sum_probs=44.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEE------ecCCCHHHHHHHhc--CCCEEEEcCCCCChh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE------GELDEHKKIVSILK--EVDVVISTVAYPQFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~------gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~ 72 (230)
+++++.+.|++|+++..+..... | .+....-.+.. -++.|.+.+.++++ ++|+|+-..+...-.
T Consensus 17 ~~~aa~~lG~~vv~~~~~~d~~a-~-------~~~~aD~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~pg~g~~se~ 88 (449)
T TIGR00514 17 ILRACKELGIKTVAVHSTADRDA-L-------HVLLADEAVCIGPAPSAKSYLNIPNIISAAEITGADAIHPGYGFLSEN 88 (449)
T ss_pred HHHHHHHcCCeEEEEEChhhhcc-c-------ccccCCEEEEcCCCCchhchhCHHHHHHHHHHhCCCEEEeCCCccccC
Confidence 35677888999999975422111 1 01111111221 25677777877655 899999876432211
Q ss_pred hHHHHHHHHHHhCCcc
Q 026978 73 DQLEIVHAIKVAGNIK 88 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vk 88 (230)
..+.+.+.+.| ++
T Consensus 89 --~~~a~~~e~~G-i~ 101 (449)
T TIGR00514 89 --ANFAEQCERSG-FT 101 (449)
T ss_pred --HHHHHHHHHCC-Cc
Confidence 23567778888 55
|
This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=86.49 E-value=3.2 Score=28.84 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=34.7
Q ss_pred HHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEecc
Q 026978 51 KIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPS 93 (230)
Q Consensus 51 ~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v~S 93 (230)
.|.+.++.+|+||......+-.....+-+.|++.+ + .++++
T Consensus 41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~-i-p~~~~ 81 (97)
T PF10087_consen 41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG-I-PIIYS 81 (97)
T ss_pred HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC-C-cEEEE
Confidence 48899999999999998887778888999999999 4 46653
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=86.38 E-value=4.3 Score=36.90 Aligned_cols=60 Identities=17% Similarity=0.160 Sum_probs=37.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|+++||+|++..|+.+ +.+.+......|..+. ...+.+++.+.++.+|+||.++..
T Consensus 14 mA~nL~~~G~~V~v~drt~~------~~~~l~~~~~~g~~~~--~~~s~~e~v~~l~~~dvIil~v~~ 73 (467)
T TIGR00873 14 LALNMADHGFTVSVYNRTPE------KTDEFLAEHAKGKKIV--GAYSIEEFVQSLERPRKIMLMVKA 73 (467)
T ss_pred HHHHHHhcCCeEEEEeCCHH------HHHHHHhhccCCCCce--ecCCHHHHHhhcCCCCEEEEECCC
Confidence 46789999999999999743 3333322101121111 234567777778888888777654
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=86.11 E-value=2.8 Score=28.66 Aligned_cols=59 Identities=25% Similarity=0.371 Sum_probs=36.5
Q ss_pred CHHHHhhCC---CeEEEE-EcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhh
Q 026978 1 MVKASVSSG---HKTFVY-ARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLD 73 (230)
Q Consensus 1 lv~~Ll~~g---~~V~~l-~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~ 73 (230)
|++.|++.| ++|.+. .|+ |+|.+.+.. .-++.+...| ..++++.+|+||.++.+..+..
T Consensus 14 l~~~l~~~g~~~~~v~~~~~r~------~~~~~~~~~--~~~~~~~~~~------~~~~~~~advvilav~p~~~~~ 76 (96)
T PF03807_consen 14 LARGLLASGIKPHEVIIVSSRS------PEKAAELAK--EYGVQATADD------NEEAAQEADVVILAVKPQQLPE 76 (96)
T ss_dssp HHHHHHHTTS-GGEEEEEEESS------HHHHHHHHH--HCTTEEESEE------HHHHHHHTSEEEE-S-GGGHHH
T ss_pred HHHHHHHCCCCceeEEeeccCc------HHHHHHHHH--hhccccccCC------hHHhhccCCEEEEEECHHHHHH
Confidence 467889999 999966 776 445444332 2344444322 3556678999999998765443
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=85.75 E-value=10 Score=32.85 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=53.5
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCC----------------CCcchHh----hhhhhcCCCe--EEEEecCCCHHHHHHHhc
Q 026978 1 MVKASVSSGH-KTFVYARPVTQN----------------SRPSKLE----IHKEFQGIGV--TIIEGELDEHKKIVSILK 57 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~----------------~~p~k~~----~l~~l~~~gv--~vv~gD~~d~~~L~~al~ 57 (230)
+++.|...|+ .+++++++.-.. ..| |++ .++.+ .+++ +.+..|++ .+.+.+.++
T Consensus 39 va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~-Ka~aa~~~l~~i-np~v~i~~~~~~~~-~~~~~~~~~ 115 (338)
T PRK12475 39 NAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKP-KAIAAKEHLRKI-NSEVEIVPVVTDVT-VEELEELVK 115 (338)
T ss_pred HHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCcc-HHHHHHHHHHHH-CCCcEEEEEeccCC-HHHHHHHhc
Confidence 3677888997 788888874100 001 332 22233 2344 44556764 467888899
Q ss_pred CCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEe
Q 026978 58 EVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 58 g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
++|+||.+... ......+-++|++.| ++.+.
T Consensus 116 ~~DlVid~~D~--~~~r~~in~~~~~~~-ip~i~ 146 (338)
T PRK12475 116 EVDLIIDATDN--FDTRLLINDLSQKYN-IPWIY 146 (338)
T ss_pred CCCEEEEcCCC--HHHHHHHHHHHHHcC-CCEEE
Confidence 99999999743 444455667889988 66543
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=85.48 E-value=1.2 Score=37.51 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=35.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|++.||+|++.+|+.. +.+ .+...|+.. .+++.++++++|+||.++..
T Consensus 11 mA~~L~~~G~~V~v~dr~~~------~~~---~l~~~g~~~-------~~s~~~~~~~advVil~vp~ 62 (288)
T TIGR01692 11 MAANLLKAGHPVRVFDLFPD------AVE---EAVAAGAQA-------AASPAEAAEGADRVITMLPA 62 (288)
T ss_pred HHHHHHhCCCeEEEEeCCHH------HHH---HHHHcCCee-------cCCHHHHHhcCCEEEEeCCC
Confidence 46789999999999998743 322 233345432 12356778899999999876
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
Probab=85.12 E-value=8.7 Score=34.82 Aligned_cols=77 Identities=13% Similarity=0.209 Sum_probs=43.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEe------cCCCHHHHHHHhc--CCCEEEEcCCCCChh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEG------ELDEHKKIVSILK--EVDVVISTVAYPQFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~g------D~~d~~~L~~al~--g~D~Vi~~~~~~~~~ 72 (230)
|++++.+.|++++++..+..... +. . .+ ..-.+..+ |+.|.+.+.++++ ++|+|+-..+...-
T Consensus 20 ii~aa~~lG~~~v~~~s~~d~~~-~~----~-~~--aD~~~~i~p~~~~~~y~d~~~i~~~a~~~~~daI~pg~g~lsE- 90 (467)
T PRK12833 20 IIRAARELGMRTVAACSDADRDS-LA----A-RM--ADEAVHIGPSHAAKSYLNPAAILAAARQCGADAIHPGYGFLSE- 90 (467)
T ss_pred HHHHHHHcCCeEEEEECCCCCCC-hh----H-Hh--CCEEEecCCCCccccccCHHHHHHHHHHhCCCEEEECCCcccc-
Confidence 46778888999988864332211 10 0 11 11112223 7888888888887 66888865442211
Q ss_pred hHHHHHHHHHHhCCcc
Q 026978 73 DQLEIVHAIKVAGNIK 88 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vk 88 (230)
...+.+++.+.| +.
T Consensus 91 -~~~~~~~~e~~g-i~ 104 (467)
T PRK12833 91 -NAAFAEAVEAAG-LI 104 (467)
T ss_pred -CHHHHHHHHHcC-CC
Confidence 124456677777 55
|
|
| >PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function | Back alignment and domain information |
|---|
Probab=84.20 E-value=0.66 Score=35.22 Aligned_cols=66 Identities=20% Similarity=0.128 Sum_probs=43.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++++|.+.+++|+++.|++.... +..+ |+ ....-..++..||+|+.+.+..-.....+|++.
T Consensus 23 ~~~~l~~~~~~v~v~d~~~~~~~-----------~~~~------~~-~~~~~~~~l~~aD~viiTGsTlvN~Ti~~iL~~ 84 (147)
T PF04016_consen 23 LVEKLKERGAEVRVFDLNPDNIG-----------EEPG------DV-PDEDAEEILPWADVVIITGSTLVNGTIDDILEL 84 (147)
T ss_dssp CHHHHCCCCSEEEEEESSGGG-------------SSCT-------E-EGGGHHHHGGG-SEEEEECHHCCTTTHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCC-----------CCCC------cC-CHHHHHHHHccCCEEEEEeeeeecCCHHHHHHh
Confidence 46778888899999999853211 0111 11 344567889999999988765444567789999
Q ss_pred HHHh
Q 026978 81 IKVA 84 (230)
Q Consensus 81 a~~a 84 (230)
|+++
T Consensus 85 ~~~~ 88 (147)
T PF04016_consen 85 ARNA 88 (147)
T ss_dssp TTTS
T ss_pred CccC
Confidence 8843
|
; PDB: 3L5O_B 3NPG_A. |
| >PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.18 E-value=8.1 Score=35.41 Aligned_cols=87 Identities=13% Similarity=0.187 Sum_probs=55.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCC---------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-EVDVVISTVAYP--------- 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~--------- 69 (230)
+++|++.|.++.+++-..... +...+.++.++. +++.++.|++.+.+....+.+ |+|.|....+..
T Consensus 246 ~~~l~~ag~d~i~id~a~G~s--~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aGad~I~vg~g~Gs~~~t~~~~ 323 (495)
T PTZ00314 246 AAALIEAGVDVLVVDSSQGNS--IYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRIGMGSGSICITQEVC 323 (495)
T ss_pred HHHHHHCCCCEEEEecCCCCc--hHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcCCCEEEECCcCCcccccchhc
Confidence 578999999999987532211 111223444432 468999999999888888777 999997543321
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP 92 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~ 92 (230)
.+.....+.++|++.| +. +|+
T Consensus 324 ~~g~p~~~ai~~~~~~~~~~~-v~-vIa 349 (495)
T PTZ00314 324 AVGRPQASAVYHVARYARERG-VP-CIA 349 (495)
T ss_pred cCCCChHHHHHHHHHHHhhcC-Ce-EEe
Confidence 1233345666677667 54 443
|
|
| >KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=83.64 E-value=2.6 Score=33.49 Aligned_cols=49 Identities=29% Similarity=0.413 Sum_probs=36.9
Q ss_pred CCCeEEEEe-cCCCHHHHHHHhc-----CCCEEEEcCCCC----ChhhHHHHHHHHHHh
Q 026978 36 GIGVTIIEG-ELDEHKKIVSILK-----EVDVVISTVAYP----QFLDQLEIVHAIKVA 84 (230)
Q Consensus 36 ~~gv~vv~g-D~~d~~~L~~al~-----g~D~Vi~~~~~~----~~~~~~~ll~Aa~~a 84 (230)
..|+.++.+ |++|++...++++ .+|+|++-++.. .+..+..+++.|..+
T Consensus 108 ~~Ga~~i~~~dvtdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s~ 166 (232)
T KOG4589|consen 108 PEGATIIQGNDVTDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDSA 166 (232)
T ss_pred CCCcccccccccCCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHHH
Confidence 468999999 9999988777665 579999887654 245667777777553
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.50 E-value=2 Score=37.78 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=51.7
Q ss_pred HHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHH-HHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 4 ASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHK-KIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 4 ~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~-~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
.|.+++ .+|++-+|.-+ ++|.+. +..+++-|..|+.|.+ .|.+.++..|+|+++.+.. ....+..+|
T Consensus 20 ~ls~~~dv~vtva~~~~~------~~~~~~--~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~t---~h~lVaK~~ 88 (445)
T KOG0172|consen 20 FLSRKKDVNVTVASRTLK------DAEALV--KGINIKAVSLDVADEELALRKEVKPLDLVISLLPYT---FHPLVAKGC 88 (445)
T ss_pred HHhhcCCceEEEehhhHH------HHHHHh--cCCCccceEEEccchHHHHHhhhcccceeeeeccch---hhHHHHHHH
Confidence 344443 67888887643 233322 2345888999999988 9999999999999998764 233444455
Q ss_pred HHhCCcceEecccc
Q 026978 82 KVAGNIKRFLPSEF 95 (230)
Q Consensus 82 ~~ag~Vkr~v~S~~ 95 (230)
.... ++.+.|+|
T Consensus 89 i~~~--~~~vtsSy 100 (445)
T KOG0172|consen 89 IITK--EDSVTSSY 100 (445)
T ss_pred HHhh--cccccccc
Confidence 5543 55555444
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=82.68 E-value=1.4 Score=37.12 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=33.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|++.||+|++++|+.. +.+. +...|+.. ..+..++++++|+||.+++.
T Consensus 14 iA~~l~~~G~~V~~~dr~~~------~~~~---~~~~g~~~-------~~~~~~~~~~aDivi~~vp~ 65 (291)
T TIGR01505 14 MSINLAKAGYQLHVTTIGPE------VADE---LLAAGAVT-------AETARQVTEQADVIFTMVPD 65 (291)
T ss_pred HHHHHHHCCCeEEEEcCCHH------HHHH---HHHCCCcc-------cCCHHHHHhcCCEEEEecCC
Confidence 35678899999999998742 3332 22334321 12355677888999988765
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=82.58 E-value=13 Score=33.27 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=44.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEE-e------cCCCHHHHHHHhc--CCCEEEEcCCCCCh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE-G------ELDEHKKIVSILK--EVDVVISTVAYPQF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~-g------D~~d~~~L~~al~--g~D~Vi~~~~~~~~ 71 (230)
|++++.+.|++|.++.-+..... +. . .+ .. +.+. + ++.|.+.+.++++ ++|+|+-..+...-
T Consensus 17 i~~aa~~~G~~vv~~~~~~d~~a-~~----~-~~--ad-~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~p~~~~~~e 87 (451)
T PRK08591 17 IIRACKELGIKTVAVHSTADRDA-LH----V-QL--AD-EAVCIGPAPSKKSYLNIPAIISAAEITGADAIHPGYGFLSE 87 (451)
T ss_pred HHHHHHHcCCeEEEEcChhhccC-CC----H-hH--CC-EEEEeCCCCcccccCCHHHHHHHHHHhCCCEEEECCCcccc
Confidence 46788899999999855432211 10 0 11 11 2222 1 4667777777744 79999876643221
Q ss_pred hhHHHHHHHHHHhCCcceE
Q 026978 72 LDQLEIVHAIKVAGNIKRF 90 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~ 90 (230)
. ..+...+.+.| ++-+
T Consensus 88 ~--~~~~~~~e~~g-i~~~ 103 (451)
T PRK08591 88 N--ADFAEICEDSG-FTFI 103 (451)
T ss_pred C--HHHHHHHHHCC-CceE
Confidence 1 14566777888 5533
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=81.97 E-value=31 Score=29.30 Aligned_cols=29 Identities=14% Similarity=0.033 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHH--------cCCCEEEEeccccc
Q 026978 110 AYLEKKRIVRRAIEA--------AQIPYTFVSANLCG 138 (230)
Q Consensus 110 ~~~~~K~~~e~~l~~--------~gl~~tilr~g~~~ 138 (230)
.|..+|..++.+.+. .|+....|.||+..
T Consensus 191 ~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~ 227 (299)
T PRK06300 191 GMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLA 227 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCcc
Confidence 577899888765542 37889999998864
|
|
| >PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria | Back alignment and domain information |
|---|
Probab=81.90 E-value=15 Score=30.80 Aligned_cols=91 Identities=22% Similarity=0.316 Sum_probs=53.7
Q ss_pred CCCeEEEEecCC-CHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEecccccccCCCCCCCCchhHHHHH
Q 026978 36 GIGVTIIEGELD-EHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEK 114 (230)
Q Consensus 36 ~~gv~vv~gD~~-d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~ 114 (230)
++.+-++.|+.. |+..+.+ .+|++++. ........++.+|++-| .+.||+-+|--.-. ......-
T Consensus 86 RpDIl~ia~~~~EDp~~i~~---~aDi~~~~---D~~~~G~~i~~~Ak~mG-AktFVh~sfprhms-------~~~l~~R 151 (275)
T PF12683_consen 86 RPDILLIAGEPHEDPEVISS---AADIVVNP---DEISRGYTIVWAAKKMG-AKTFVHYSFPRHMS-------YELLARR 151 (275)
T ss_dssp -TTSEEEESS--S-HHHHHH---HSSEEEE-----HHHHHHHHHHHHHHTT--S-EEEEEETTGGG-------SHHHHHH
T ss_pred CCCeEEEcCCCcCCHHHHhh---ccCeEecc---chhhccHHHHHHHHHcC-CceEEEEechhhcc-------hHHHHHH
Confidence 467788888864 5555554 47888883 23566789999999999 99999744422110 1123455
Q ss_pred HHHHHHHHHHcCCCEEEEe-ccccchh
Q 026978 115 KRIVRRAIEAAQIPYTFVS-ANLCGAY 140 (230)
Q Consensus 115 K~~~e~~l~~~gl~~tilr-~g~~~~~ 140 (230)
+..+++.+++.|++|+.+. |.+-.+.
T Consensus 152 r~~M~~~C~~lGi~fv~~taPDP~sd~ 178 (275)
T PF12683_consen 152 RDIMEEACKDLGIKFVEVTAPDPTSDV 178 (275)
T ss_dssp HHHHHHHHHHCT--EEEEEE---SSTC
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCCCCC
Confidence 5668888999999999984 5555443
|
They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A. |
| >PLN02274 inosine-5'-monophosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=81.83 E-value=9.7 Score=34.99 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=44.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-CCCEEEEcC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-EVDVVISTV 66 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~ 66 (230)
+++|++.|.+|.+++-...... .-.+.++.++. +++.++.||+.+.+....+.+ |+|+|....
T Consensus 253 ~~~l~~ag~d~i~iD~~~g~~~--~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aGaD~i~vg~ 318 (505)
T PLN02274 253 LEHLVKAGVDVVVLDSSQGDSI--YQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAGVDGLRVGM 318 (505)
T ss_pred HHHHHHcCCCEEEEeCCCCCcH--HHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcCcCEEEECC
Confidence 5789999999999987543221 11123444433 478999999999888888777 999997643
|
|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=81.68 E-value=8.4 Score=34.21 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=45.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|+.++.+.|+.+.++.-+.+.. + .. .....++.+|..|.+.|.+.++ ++|.||... +......+.
T Consensus 15 l~~~~~~~~~~~~~~~~~~~~~--~-------~~-~~~~~~~~~~~~d~~~l~~~~~~~~id~vi~~~---e~~l~~~~~ 81 (423)
T TIGR00877 15 LAWKLAQSPLVKYVYVAPGNAG--T-------AR-LAKNKNVAISITDIEALVEFAKKKKIDLAVIGP---EAPLVLGLV 81 (423)
T ss_pred HHHHHHhCCCccEEEEECCCHH--H-------hh-hcccccccCCCCCHHHHHHHHHHhCCCEEEECC---chHHHHHHH
Confidence 4567777787777775543321 1 00 1123456679999999988877 678887432 111223456
Q ss_pred HHHHHhCCcceE
Q 026978 79 HAIKVAGNIKRF 90 (230)
Q Consensus 79 ~Aa~~ag~Vkr~ 90 (230)
+.+.+.| ++-+
T Consensus 82 ~~l~~~g-i~~~ 92 (423)
T TIGR00877 82 DALEEAG-IPVF 92 (423)
T ss_pred HHHHHCC-CeEE
Confidence 6777778 6533
|
This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=81.62 E-value=5.2 Score=34.73 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=43.3
Q ss_pred HHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEE-EecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 2 VKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTII-EGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv-~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++.|.+. +++++++.+..+..+ + +... ..++..+ ..++.+.+.. +++++|+||.|++. .....++.
T Consensus 19 ~~~L~~~p~~elv~v~~~~~~g~---~---l~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~---~~~~~~v~ 86 (343)
T PRK00436 19 LRLLLNHPEVEIVAVTSRSSAGK---P---LSDV-HPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH---GVSMDLAP 86 (343)
T ss_pred HHHHHcCCCceEEEEECccccCc---c---hHHh-CcccccccCceeecCCHH--HhcCCCEEEECCCc---HHHHHHHH
Confidence 4556654 678888877433211 1 1111 1112211 2244444332 56789999999866 45677788
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
++.++| +++|
T Consensus 87 ~a~~aG--~~VI 96 (343)
T PRK00436 87 QLLEAG--VKVI 96 (343)
T ss_pred HHHhCC--CEEE
Confidence 888888 5676
|
|
| >PRK07807 inosine 5-monophosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=81.57 E-value=9.8 Score=34.72 Aligned_cols=84 Identities=21% Similarity=0.285 Sum_probs=53.8
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCC---------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK-EVDVVISTVAYP--------- 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~--------- 69 (230)
++.|+++|.++.+++=...... .-.+.++.++. +++.++.||+...+....+++ |+|+|-.-.|+.
T Consensus 232 a~~Lv~aGvd~i~~D~a~~~~~--~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aGad~v~vgig~gsictt~~~~ 309 (479)
T PRK07807 232 ARALLEAGVDVLVVDTAHGHQE--KMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAGADIVKVGVGPGAMCTTRMMT 309 (479)
T ss_pred HHHHHHhCCCEEEEeccCCccH--HHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcCCCEEEECccCCccccccccc
Confidence 6788999999988864332211 11223334432 479999999999888887777 999997555542
Q ss_pred -----ChhhHHHHHHHHHHhCCcc
Q 026978 70 -----QFLDQLEIVHAIKVAGNIK 88 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vk 88 (230)
++....++.++|++.| ++
T Consensus 310 ~~~~p~~~av~~~~~~~~~~~-~~ 332 (479)
T PRK07807 310 GVGRPQFSAVLECAAAARELG-AH 332 (479)
T ss_pred CCchhHHHHHHHHHHHHHhcC-Cc
Confidence 1334455556666666 54
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=81.49 E-value=6.2 Score=35.59 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=48.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|++.|++|++.+++..... +. ....++..|+.++.++-. .+ .+.++|.||...+... ....+.+|
T Consensus 30 a~~L~~~G~~V~~~D~~~~~~~-~~---~~~~l~~~gi~~~~~~~~-~~----~~~~~dlVV~Spgi~~---~~p~~~~a 97 (458)
T PRK01710 30 IKFLVKLGAKVTAFDKKSEEEL-GE---VSNELKELGVKLVLGENY-LD----KLDGFDVIFKTPSMRI---DSPELVKA 97 (458)
T ss_pred HHHHHHCCCEEEEECCCCCccc-hH---HHHHHHhCCCEEEeCCCC-hH----HhccCCEEEECCCCCC---CchHHHHH
Confidence 5678899999999997653221 10 112344568888877543 22 2467899998865542 23567788
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
++.| ++
T Consensus 98 ~~~~-i~ 103 (458)
T PRK01710 98 KEEG-AY 103 (458)
T ss_pred HHcC-Cc
Confidence 8888 66
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=81.39 E-value=2.3 Score=31.84 Aligned_cols=58 Identities=22% Similarity=0.198 Sum_probs=33.5
Q ss_pred HHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
++.|++.| ++|+++.|+.. +.+.+.. ..+...+..+..|. .++++++|+||++++...
T Consensus 35 a~~l~~~g~~~v~v~~r~~~------~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 35 AYALAELGAAKIVIVNRTLE------KAKALAE--RFGELGIAIAYLDL---EELLAEADLIINTTPVGM 93 (155)
T ss_pred HHHHHHCCCCEEEEEcCCHH------HHHHHHH--HHhhcccceeecch---hhccccCCEEEeCcCCCC
Confidence 56777775 88999998743 2222111 11221122234443 344789999999987653
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=81.32 E-value=3.5 Score=36.26 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=39.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
++.|...|.+|++++|+.. +.+.+.. .-+. .+..+..+.+.+.++++++|+||.++..
T Consensus 183 a~~a~~lGa~V~v~d~~~~------~~~~l~~--~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 183 AKMANGLGATVTILDINID------RLRQLDA--EFGG-RIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred HHHHHHCCCeEEEEECCHH------HHHHHHH--hcCc-eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 4566778999999998632 3322211 1122 2345667788899999999999999743
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic | Back alignment and domain information |
|---|
Probab=80.86 E-value=14 Score=32.02 Aligned_cols=65 Identities=12% Similarity=0.067 Sum_probs=43.5
Q ss_pred HHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCC
Q 026978 2 VKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-EVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~ 68 (230)
+++|++.| .++.+++-....+. .-.+.++.++ .++..++.|++.+++....+++ |+|+|....|+
T Consensus 112 ~~~L~~a~~~~d~iviD~AhGhs~--~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aGAD~ikVgiGp 181 (343)
T TIGR01305 112 MTSILEAVPQLKFICLDVANGYSE--HFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADIVKVGIGP 181 (343)
T ss_pred HHHHHhcCCCCCEEEEECCCCcHH--HHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcCCCEEEEcccC
Confidence 56788875 78888865433221 1122233332 3679999999999888888777 99999766554
|
A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. |
| >PRK07178 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
Probab=80.70 E-value=17 Score=33.00 Aligned_cols=78 Identities=12% Similarity=0.123 Sum_probs=47.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEE-----EecCCCHHHHHHHhc--CCCEEEEcCCCCChhh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTII-----EGELDEHKKIVSILK--EVDVVISTVAYPQFLD 73 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv-----~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~ 73 (230)
+++++.+.|+++.++..+..... + .++...-.+. ..++.|.+.+.++++ ++|+|+-..+...-.
T Consensus 17 ii~a~~~~Gi~~v~v~~~~d~~a-~-------~~~~aD~~~~i~~~~~~~y~d~~~i~~~a~~~~~D~I~pg~g~lse~- 87 (472)
T PRK07178 17 IVRACAEMGIRSVAIYSEADRHA-L-------HVKRADEAYSIGADPLAGYLNPRRLVNLAVETGCDALHPGYGFLSEN- 87 (472)
T ss_pred HHHHHHHcCCeEEEEeCCCccCC-c-------cHhhCCEEEEcCCCchhhhcCHHHHHHHHHHHCCCEEEeCCCCcccC-
Confidence 46788889999999987654321 1 0100111111 145778888888885 899999765432211
Q ss_pred HHHHHHHHHHhCCcce
Q 026978 74 QLEIVHAIKVAGNIKR 89 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr 89 (230)
..+.+.+.+.| ++-
T Consensus 88 -~~~a~~~e~~G-i~~ 101 (472)
T PRK07178 88 -AELAEICAERG-IKF 101 (472)
T ss_pred -HHHHHHHHHcC-CCc
Confidence 23567777888 653
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=80.31 E-value=2.6 Score=35.92 Aligned_cols=79 Identities=5% Similarity=0.110 Sum_probs=40.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-----hhhhhcCCCe------EEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-----IHKEFQGIGV------TIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-----~l~~l~~~gv------~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++..|+++||+|++++|+.... +++. .+..+...|. +-....+.-..++.++++++|+|+.++..
T Consensus 17 iA~~la~~G~~V~v~d~~~~~~---~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ad~Vi~avpe- 92 (308)
T PRK06129 17 WAIVFARAGHEVRLWDADPAAA---AAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVADADYVQESAPE- 92 (308)
T ss_pred HHHHHHHCCCeeEEEeCCHHHH---HHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCCCCEEEECCcC-
Confidence 3567889999999999975321 0100 0111212221 00000111123466788999999999854
Q ss_pred ChhhHHHHHHHHHH
Q 026978 70 QFLDQLEIVHAIKV 83 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ 83 (230)
.......+++.+.+
T Consensus 93 ~~~~k~~~~~~l~~ 106 (308)
T PRK06129 93 NLELKRALFAELDA 106 (308)
T ss_pred CHHHHHHHHHHHHH
Confidence 23334445554444
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=80.17 E-value=15 Score=34.45 Aligned_cols=71 Identities=17% Similarity=0.280 Sum_probs=45.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
+.++.+.|++|.+++.+... |.. .+ --+.+.+++.|.+.|.++.+.+|+|.......+. ..++.+
T Consensus 38 a~aA~~lG~~Vi~ld~~~~a---pa~-----~~---AD~~~v~~~~D~~~l~~~a~~~dvIt~e~e~v~~----~~l~~l 102 (577)
T PLN02948 38 CQAASQMGIKVKVLDPLEDC---PAS-----SV---AARHVVGSFDDRAAVREFAKRCDVLTVEIEHVDV----DTLEAL 102 (577)
T ss_pred HHHHHHCCCEEEEEeCCCCC---chh-----hh---CceeeeCCCCCHHHHHHHHHHCCEEEEecCCCCH----HHHHHH
Confidence 55677889999999876542 210 11 1235668999999999999999988554332222 123556
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
.+.| ++
T Consensus 103 e~~g-i~ 108 (577)
T PLN02948 103 EKQG-VD 108 (577)
T ss_pred HhcC-Cc
Confidence 6667 54
|
|
| >COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=80.10 E-value=8.4 Score=29.06 Aligned_cols=57 Identities=23% Similarity=0.306 Sum_probs=41.8
Q ss_pred hcCCCeEEEEecCC-CHHHHHH-Hhc-CCCEEE-EcCCCCChhhHHHHHHHHHHhCCcceEe
Q 026978 34 FQGIGVTIIEGELD-EHKKIVS-ILK-EVDVVI-STVAYPQFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 34 l~~~gv~vv~gD~~-d~~~L~~-al~-g~D~Vi-~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
|+..|++++..-+. .+++... |++ ++|+|. |.....+......++++++++| +.++.
T Consensus 36 l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve~lre~G-~~~i~ 96 (143)
T COG2185 36 LADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVEALREAG-VEDIL 96 (143)
T ss_pred HHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEeccchHHHHHHHHHHHHHHhC-CcceE
Confidence 56789998877654 4555544 444 788765 5555567778899999999999 99876
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 230 | ||||
| 3c1o_A | 321 | The Multiple Phenylpropene Synthases In Both Clarki | 3e-59 | ||
| 3c1o_A | 321 | The Multiple Phenylpropene Synthases In Both Clarki | 1e-14 | ||
| 2qw8_A | 314 | Structure Of Eugenol Synthase From Ocimum Basilicum | 4e-54 | ||
| 2qw8_A | 314 | Structure Of Eugenol Synthase From Ocimum Basilicum | 5e-18 | ||
| 2qx7_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 6e-54 | ||
| 2qx7_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 5e-18 | ||
| 3c3x_A | 318 | The Multiple Phenylpropene Synthases In Both Clarki | 6e-54 | ||
| 3c3x_A | 318 | The Multiple Phenylpropene Synthases In Both Clarki | 5e-18 | ||
| 2r2g_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-53 | ||
| 2r2g_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 5e-18 | ||
| 1qyd_A | 313 | Crystal Structures Of Pinoresinol-Lariciresinol And | 7e-32 | ||
| 1qyd_A | 313 | Crystal Structures Of Pinoresinol-Lariciresinol And | 1e-04 | ||
| 1qyc_A | 308 | Crystal Structures Of Pinoresinol-Lariciresinol And | 5e-31 | ||
| 1qyc_A | 308 | Crystal Structures Of Pinoresinol-Lariciresinol And | 1e-10 | ||
| 2gas_A | 307 | Crystal Structure Of Isoflavone Reductase Length = | 3e-25 | ||
| 3i52_A | 346 | Ternary Complex Structure Of Leucoanthocyanidin Red | 1e-21 |
| >pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321 | Back alignment and structure |
|
| >pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321 | Back alignment and structure |
|
| >pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314 | Back alignment and structure |
|
| >pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314 | Back alignment and structure |
|
| >pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318 | Back alignment and structure |
|
| >pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318 | Back alignment and structure |
|
| >pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318 | Back alignment and structure |
|
| >pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318 | Back alignment and structure |
|
| >pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318 | Back alignment and structure |
|
| >pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318 | Back alignment and structure |
|
| >pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313 | Back alignment and structure |
|
| >pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313 | Back alignment and structure |
|
| >pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308 | Back alignment and structure |
|
| >pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308 | Back alignment and structure |
|
| >pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307 | Back alignment and structure |
|
| >pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 189 bits (481), Expect = 2e-59
Identities = 125/302 (41%), Positives = 175/302 (57%), Gaps = 72/302 (23%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MV+AS+S H TF+YARP+T +S PS +++ +EF+ +GVTIIEGE++EH+K+VS+LK+VD
Sbjct: 20 MVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
+VIS + +P Q+ I++AIK AGNIKRFLPS+FGCEED+++PLPPFE+ LEKKRI+RR
Sbjct: 80 IVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRR 139
Query: 121 AIEAAQIPYTFVSANL---------------------------------------CGAYF 141
AIEAA +PYT+VSAN Y
Sbjct: 140 AIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYT 199
Query: 142 VNVLLRPFESHDDVVVYGSGE--------------------------------AKALPPP 169
+ V P + V+ ++ LP P
Sbjct: 200 IKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQP 259
Query: 170 EDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLID-PPKPARTA 228
++IP+SI+HS+ KGD M++E+ +DDIEAS LYP+ +FT+ID LLD+F+ P P
Sbjct: 260 QNIPVSILHSIFVKGDLMSYEMRKDDIEASNLYPELEFTSIDGLLDLFISGRAPPPTLAE 319
Query: 229 FE 230
FE
Sbjct: 320 FE 321
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 8e-58
Identities = 126/297 (42%), Positives = 165/297 (55%), Gaps = 73/297 (24%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
MVK S+ GH T+V+ RP SK + EFQ +G I++GELDEH+K+V ++K+VD
Sbjct: 27 MVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVD 81
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVIS +A+PQ LDQ +I+ AIKVAGNIKRFLPS+FG EED++ LPPFEA +E+KR++RR
Sbjct: 82 VVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRR 141
Query: 121 AIEAAQIPYTFVSANL------------------------------------CGAYFVNV 144
AIE A IPYT+VSAN G Y + V
Sbjct: 142 AIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV 201
Query: 145 LLRPFESHDDVVVYGSGE--------------------------------AKALPPPEDI 172
P + V+ S K LP PE+I
Sbjct: 202 ATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENI 261
Query: 173 PISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAF 229
PI+I+H L G +M+++ E+D+EAS LYP+ KFTTID+LLDIF+ DPP PA AF
Sbjct: 262 PIAILHCLFIDGATMSYDFKENDVEASTLYPELKFTTIDELLDIFVHDPPPPASAAF 318
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 4e-51
Identities = 90/289 (31%), Positives = 128/289 (44%), Gaps = 71/289 (24%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+ KAS+ GH TF+ R T +S K ++ + F+ G I+ G +D+H +V +K VD
Sbjct: 20 VAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVD 79
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRR 120
VVISTV Q Q+ I+ AIK G +KRF PSEFG + D V + P ++ E K VRR
Sbjct: 80 VVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRR 139
Query: 121 AIEAAQIPYTFVSANL---------------------------------------CGAYF 141
AIEA IPYT+VS+N G +
Sbjct: 140 AIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFT 199
Query: 142 VNVLLRPFESHDDVVVYGSGEA--------------------------------KALPPP 169
+ + P + + + P P
Sbjct: 200 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFP 259
Query: 170 EDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218
+I I+I HS+ KGD NFE+G +EAS+LYPD K+TT+D+ L F+
Sbjct: 260 ANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 308
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-46
Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 72/290 (24%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPS-KLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV 59
+V AS+ +G+ T+ R + P K E+ +Q +GV ++EG++++H+ +V +K+V
Sbjct: 18 IVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQV 77
Query: 60 DVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVR 119
D+VI DQ++I+ AIK AGN+K+F PSEFG + D+ + P E+K +R
Sbjct: 78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIR 137
Query: 120 RAIEAAQIPYTFVSANL---------------------------------------CGAY 140
R IEA +PYT++ + G +
Sbjct: 138 RVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197
Query: 141 FVNVLLRPFESHDDVVVYGSG--------------------------------EAKALPP 168
+ P + V + + +
Sbjct: 198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSF 257
Query: 169 PEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218
P + +++ HS KGD++ DIEAS+ YPD +TT D+ L+ F+
Sbjct: 258 PHNYLLALYHSQQIKGDAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 307
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 157 bits (397), Expect = 1e-46
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 76/302 (25%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--E 58
+ AS+ + T++ ARP ++ PSK +I K + G I+ G ++E + + ILK E
Sbjct: 26 VATASLDAHRPTYILARPGPRS--PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHE 83
Query: 59 VDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIV 118
+D+V+STV LDQ+ +V A+K G IKRFLPSEFG + ++ P+ P +KR V
Sbjct: 84 IDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRV 143
Query: 119 RRAIEAAQIPYTFVSANL---------------------------------------CGA 139
R+ +E + IP+T++ N G
Sbjct: 144 RQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGK 203
Query: 140 YFVNVLLRPFESHDDVVVYGSGE--------------------------------AKALP 167
+ + + + V S A
Sbjct: 204 FTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENI 263
Query: 168 PPEDIPISIMHSLLAKGDSMNFEL-GEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPAR 226
P+ + + H + KG +NF + G +D+E + LYP+ F T+++ +++ +
Sbjct: 264 IPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEKQP 323
Query: 227 TA 228
TA
Sbjct: 324 TA 325
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-46
Identities = 92/295 (31%), Positives = 134/295 (45%), Gaps = 78/295 (26%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V AS+S GH T+V RP S K+++ F+ +G +IE LD+H+++V LK+VD
Sbjct: 20 IVNASISLGHPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 78
Query: 61 VVISTVA----YPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKV-RPLPPFEAYLEKK 115
VVIS +A L+QL++V AIK AGNIKRFLPSEFG + D + L P K
Sbjct: 79 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDK 138
Query: 116 RIVRRAIEAAQIPYTFVSANL--------------------------------------- 136
R VRRAIEAA IPYT+VS+N+
Sbjct: 139 RKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED 198
Query: 137 -CGAYFVNVLLRPFESHDDVVVYGSG--------------------------------EA 163
G Y + + P + + + +
Sbjct: 199 DVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADM 258
Query: 164 KALPPPEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218
K E I ++ + +GD NFE+G + IEA+KLYP+ K+ T+D L+ ++
Sbjct: 259 KDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 313
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 7e-10
Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 19/141 (13%)
Query: 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDV 61
+ +V +G++ V R S+L ++ G++ + + + D
Sbjct: 20 LAQAVQAGYEVTVLVR------DSSRL---PSEGPRPAHVVVGDVLQAADVDKTVAGQDA 70
Query: 62 VISTVAYPQFLDQLE--------IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYL 112
VI + L IV A+K G + + + + D + P +A
Sbjct: 71 VIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVT 129
Query: 113 EKKRIVRRAIEAAQIPYTFVS 133
+ + + + + + Y V
Sbjct: 130 DDHIRMHKVLRESGLKYVAVM 150
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 4e-07
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 13/132 (9%)
Query: 8 SGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVA 67
+ +Y R + + VT+IEG + + +VV
Sbjct: 29 TDMHITLYGR------QLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82
Query: 68 YPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEED------KVRPLPPFEAYLEKKRIVRRA 121
D IV A+ + S G + K +Y++ +R R
Sbjct: 83 -ESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNV 141
Query: 122 IEAAQIPYTFVS 133
+ + + YT +
Sbjct: 142 LRESNLNYTILR 153
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 7e-07
Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 17/131 (12%)
Query: 9 GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68
K ++AR +P+K+ + II G++ H + ++ D+V + +
Sbjct: 48 TIKQTLFAR------QPAKI---HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98
Query: 69 PQFLDQLE-IVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPP-----FEAYLEKKRIVRRA 121
Q ++ A+K +KR + G ++ L+ R A
Sbjct: 99 EDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADA 157
Query: 122 IEAAQIPYTFV 132
IEA+ + YT +
Sbjct: 158 IEASGLEYTIL 168
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 7e-04
Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 31/152 (20%)
Query: 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDV 61
+ +++ G + R P K++I E + + + ++ ++ + K D
Sbjct: 21 LNEALNRGFEVTAVVR------HPEKIKIENE----HLKVKKADVSSLDEVCEVCKGADA 70
Query: 62 VISTVAY----PQFLDQ-----LEIVHAIKVAGNIKRFL-----------PSEFGCEEDK 101
VIS P D+ L I+ +K AG + RFL P + +
Sbjct: 71 VISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGE 129
Query: 102 VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVS 133
V + + ++ +I + F S
Sbjct: 130 VPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 9e-04
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 24/143 (16%)
Query: 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDV 61
+ + GH+ R + +E I+ L+E +D
Sbjct: 38 LSELKNKGHEPVAMVR------NEEQGPELRE--RGASDIVVANLEE--DFSHAFASIDA 87
Query: 62 VISTV--------AYPQFLD---QLEIVHAIKVAGNIKRF-LPSEFGCEEDKVRPLPPFE 109
V+ +D ++ + + G IKRF + S G + P+
Sbjct: 88 VVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQGPMN-MR 145
Query: 110 AYLEKKRIVRRAIEAAQIPYTFV 132
YL KR+ ++ + + YT V
Sbjct: 146 HYLVAKRLADDELKRSSLDYTIV 168
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 230 | |||
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.97 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.96 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.96 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.96 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.95 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.78 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.77 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.77 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.76 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.76 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.75 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.75 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.74 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.72 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.72 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.7 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.7 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.69 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.69 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.68 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.68 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.67 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.67 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.67 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.66 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.66 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.65 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.64 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.64 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.63 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.63 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.62 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.58 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.58 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.58 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.58 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.57 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.57 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.56 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.56 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.56 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.56 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.55 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.55 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.55 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.55 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.55 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.54 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.54 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.53 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.53 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.51 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.51 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.5 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.5 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.5 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.5 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.5 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.5 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.5 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.5 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.49 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.49 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.49 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.48 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.47 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.47 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.46 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.46 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.46 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.44 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.43 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.42 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.42 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.41 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.4 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.38 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.37 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.36 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.35 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.35 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.34 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.32 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.32 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.25 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.24 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.2 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.15 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.09 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.08 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.07 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.05 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.05 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.04 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.02 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.02 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.02 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.01 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.99 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.99 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.98 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.97 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.97 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.97 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.97 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.96 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.96 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.95 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.95 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 98.95 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.95 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.95 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.94 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.94 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.94 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.92 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.92 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.92 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.91 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.9 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.9 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.9 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.89 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.89 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.89 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.89 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.88 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.88 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.88 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.88 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.88 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.87 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.87 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.86 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.86 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.86 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.86 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.86 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.85 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.85 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.85 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.85 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.84 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.84 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.84 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.84 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.83 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.83 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.83 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.83 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.82 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.82 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.82 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.82 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.82 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.81 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.81 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.81 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.81 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.81 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.8 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.8 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.8 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.8 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.8 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.8 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.78 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.77 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.77 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.76 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.76 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.76 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.76 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.76 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.75 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.75 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.74 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.74 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.73 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.73 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.73 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.73 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.72 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.72 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.72 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.72 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.72 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.72 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.71 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.71 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.71 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.7 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.7 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.69 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.69 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.69 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.69 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.69 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.69 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.68 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.68 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 98.68 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.68 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.68 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.68 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.68 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.67 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.67 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.67 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.66 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.66 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.66 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.65 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.65 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.64 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.64 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.64 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.64 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.64 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.64 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.64 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.63 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.63 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.63 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.62 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.61 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.61 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.61 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.61 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.6 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.6 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.59 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.58 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.58 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.58 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.58 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.57 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.57 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.57 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.56 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.56 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.56 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.55 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.55 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.54 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.53 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.53 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.53 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.52 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.52 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.51 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.51 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.51 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.5 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.5 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.5 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.49 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.48 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.48 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.48 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.47 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.47 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.46 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.45 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.43 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.42 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.41 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.41 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.4 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.39 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.37 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.37 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.36 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.35 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.34 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.33 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.28 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.26 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.25 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.2 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.17 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.16 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.15 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.11 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.11 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.11 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.08 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.03 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.02 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.98 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 97.98 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.97 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.96 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.92 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.9 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.88 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.84 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.83 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.8 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.69 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.66 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.63 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.63 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.63 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.52 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.5 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.48 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.48 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.35 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.2 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.01 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.91 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 96.78 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.76 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 96.65 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.55 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 96.41 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 96.3 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 96.27 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.12 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 95.99 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 95.91 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.88 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.86 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 95.84 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 95.8 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 95.74 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.55 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 95.17 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 95.1 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 94.67 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 94.48 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 94.43 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.27 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 94.27 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 93.43 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 93.3 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 92.49 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 92.28 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 92.26 | |
| 2l82_A | 162 | Designed protein OR32; structural genomics, northe | 91.69 | |
| 3eag_A | 326 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME | 91.32 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 90.94 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 90.42 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 90.22 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 90.1 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 89.91 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 89.61 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 89.29 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 88.91 | |
| 2vpq_A | 451 | Acetyl-COA carboxylase; bacteria, ATP-grAsp domain | 88.73 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 88.58 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 88.53 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 88.34 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 88.05 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 87.91 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 87.69 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 87.46 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 87.43 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 87.43 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 87.3 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 87.14 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 87.07 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 86.86 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 86.75 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 86.71 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 86.23 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 86.21 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 86.2 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 86.07 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 85.63 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 85.34 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 85.29 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 85.24 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 85.19 | |
| 3hn7_A | 524 | UDP-N-acetylmuramate-L-alanine ligase; ATP-binding | 85.08 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 84.79 | |
| 3m6y_A | 275 | 4-hydroxy-2-oxoglutarate aldolase; structural geno | 84.68 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 84.56 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 84.55 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 84.48 | |
| 4hv4_A | 494 | UDP-N-acetylmuramate--L-alanine ligase; MURC, yers | 84.35 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 83.56 | |
| 1ulz_A | 451 | Pyruvate carboxylase N-terminal domain; biotin car | 83.25 | |
| 1pjq_A | 457 | CYSG, siroheme synthase; rossman fold, nucleotide | 83.16 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 82.0 | |
| 3m0z_A | 249 | Putative aldolase; MCSG, PSI-2, structural genomic | 81.96 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 81.82 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 81.76 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 81.71 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 81.14 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 81.09 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 81.04 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 80.88 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 80.79 | |
| 2k4m_A | 153 | TR8_protein, UPF0146 protein MTH_1000; alpha+beta, | 80.54 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 80.09 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 80.07 |
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=223.14 Aligned_cols=215 Identities=33% Similarity=0.606 Sum_probs=176.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|+++|+++||+|++++|+.+.. ++|.+.++.+...+++++.+|++|.++|.++++ ++|+|||+++..++.++.+|+
T Consensus 26 l~~~L~~~g~~V~~l~R~~~~~--~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~ 103 (346)
T 3i6i_A 26 VATASLDAHRPTYILARPGPRS--PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALV 103 (346)
T ss_dssp HHHHHHHTTCCEEEEECSSCCC--HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCC--hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHH
Confidence 5789999999999999987443 456655556666899999999999999999999 999999999999999999999
Q ss_pred HHHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhccccc-----CCCCCCC
Q 026978 79 HAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLL-----RPFESHD 153 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~-----~~~~~~~ 153 (230)
+||+++|+++|||+|+||.+.++..+..|..+|+.+|..+|++++++|++||++|||+|++++.+.+. .... +
T Consensus 104 ~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~--~ 181 (346)
T 3i6i_A 104 KAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPT--D 181 (346)
T ss_dssp HHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCS--S
T ss_pred HHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCC--c
Confidence 99999987899999999987665555567778899999999999999999999999999998755431 1233 6
Q ss_pred cEEEecCCCccc--------------------------------------------------------------------
Q 026978 154 DVVVYGSGEAKA-------------------------------------------------------------------- 165 (230)
Q Consensus 154 ~~~i~g~G~~~~-------------------------------------------------------------------- 165 (230)
.+.++|+|+.++
T Consensus 182 ~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 261 (346)
T 3i6i_A 182 FFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGE 261 (346)
T ss_dssp CEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHT
T ss_pred eEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhc
Confidence 788899988765
Q ss_pred CCCCCChhhhhhhheeecCCcccccCC-CCcchhcccCCCCccccHHHHHHHhhC
Q 026978 166 LPPPEDIPISIMHSLLAKGDSMNFELG-EDDIEASKLYPDFKFTTIDQLLDIFLI 219 (230)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~l~p~~~~~t~~e~l~~~~~ 219 (230)
.+.+.+.+.++.++++.+|+++.+++. ....+++++|||++++|++||++.++.
T Consensus 262 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~~~ 316 (346)
T 3i6i_A 262 NIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYIV 316 (346)
T ss_dssp CCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCCCHHHHHHHHHC
T ss_pred CCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcCcHHHHHHHHHH
Confidence 112222345566777788887778875 336788999999999999999999873
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=209.77 Aligned_cols=222 Identities=59% Similarity=1.047 Sum_probs=162.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
|+++|+++||+|++++|+.+. +.+.+..+...|++++.+|++|.++|.++++|+|+|||+++...+..+++++++
T Consensus 27 l~~~L~~~g~~V~~l~R~~~~-----~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~a 101 (318)
T 2r6j_A 27 MVKGSLKLGHPTYVFTRPNSS-----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEA 101 (318)
T ss_dssp HHHHHHHTTCCEEEEECTTCS-----CHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHH
T ss_pred HHHHHHHCCCcEEEEECCCCc-----hhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHH
Confidence 478999999999999998642 222333344578999999999999999999999999999987777889999999
Q ss_pred HHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC--CCCCCCcEEEe
Q 026978 81 IKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR--PFESHDDVVVY 158 (230)
Q Consensus 81 a~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~--~~~~~~~~~i~ 158 (230)
|+++|+|+|||+|.||.+.++..+..|...+|.+|..+|+++++.+++||++|||+|++++.+.+.. ... +.+.++
T Consensus 102 a~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~--~~~~~~ 179 (318)
T 2r6j_A 102 IKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPK--DEITVY 179 (318)
T ss_dssp HHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCC--SEEEEE
T ss_pred HHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCC--CceEEe
Confidence 9999768999999999654443333343344599999999999999999999999999876543321 223 566777
Q ss_pred cCCCccc--------------------------------------------------------------------CCCCC
Q 026978 159 GSGEAKA--------------------------------------------------------------------LPPPE 170 (230)
Q Consensus 159 g~G~~~~--------------------------------------------------------------------~~~~~ 170 (230)
|+|+.++ ..++.
T Consensus 180 ~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 259 (318)
T 2r6j_A 180 GTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPE 259 (318)
T ss_dssp TTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHHHHHHHHSCTTT
T ss_pred cCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHHHHHHhcCCCcc
Confidence 7776554 00111
Q ss_pred ChhhhhhhheeecCCcccccCCCCcchhcccCCCCccccHHHHHHHhhCCCCCCccccC
Q 026978 171 DIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLIDPPKPARTAF 229 (230)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~p~~~~~t~~e~l~~~~~~~~~~~~~~~ 229 (230)
......++.++..|....+++...+.+.+++||+++++|++|||+..+.+||+|..++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 318 (318)
T 2r6j_A 260 NIPIAILHCLFIDGATMSYDFKENDVEASTLYPELKFTTIDELLDIFVHDPPPPASAAF 318 (318)
T ss_dssp HHHHHHHHHHHTSCTTTSSCCCTTCEEGGGTCTTCCCCCHHHHHHHHHHSCCCCCCCCC
T ss_pred hhhhheeeeEEecCCCCCCCcccccchHHHhCCCCccccHHHHHHHHhcCCCCcccccC
Confidence 11111222333333322233322234667999999999999999999999999999987
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=206.29 Aligned_cols=162 Identities=43% Similarity=0.707 Sum_probs=128.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCC-CCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQN-SRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~-~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|+++|+++||+|++++|+.+.. . |+|.+.++.+...|++++.+|++|.++|.++++|+|+|||+++...+.++.++++
T Consensus 20 l~~~L~~~g~~V~~l~R~~~~~~~-~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~ 98 (308)
T 1qyc_A 20 VAKASLDLGHPTFLLVRESTASSN-SEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIK 98 (308)
T ss_dssp HHHHHHHTTCCEEEECCCCCTTTT-HHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHH
T ss_pred HHHHHHhCCCCEEEEECCcccccC-HHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHH
Confidence 4789999999999999986543 1 3454444455567999999999999999999999999999999877788999999
Q ss_pred HHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC-----CCCCCCc
Q 026978 80 AIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR-----PFESHDD 154 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~-----~~~~~~~ 154 (230)
||+++|+|+|||+|+||.+.++..+..|...+|.+|..+|+++++.+++||++|||+|++++.+.+.. ... +.
T Consensus 99 aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~ 176 (308)
T 1qyc_A 99 AIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPR--DK 176 (308)
T ss_dssp HHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCS--SE
T ss_pred HHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCC--Cc
Confidence 99999768999999999765443333454445599999999999999999999999999876543311 122 56
Q ss_pred EEEecCCCccc
Q 026978 155 VVVYGSGEAKA 165 (230)
Q Consensus 155 ~~i~g~G~~~~ 165 (230)
+.++|+|+.++
T Consensus 177 ~~~~~~~~~~~ 187 (308)
T 1qyc_A 177 VVILGDGNARV 187 (308)
T ss_dssp EEEETTSCCEE
T ss_pred eEEecCCCceE
Confidence 77788877654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=205.53 Aligned_cols=227 Identities=59% Similarity=1.070 Sum_probs=161.4
Q ss_pred CHHHHhhCCCeEEEEEcCC-CCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPV-TQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~-~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|+++|+++||+|++++|+. +... +++.+.+..+...+++++.+|++|.++|.++++|+|+|||+++...+..+.++++
T Consensus 20 l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~ 98 (321)
T 3c1o_A 20 MVRASLSFSHPTFIYARPLTPDST-PSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIIN 98 (321)
T ss_dssp HHHHHHHTTCCEEEEECCCCTTCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHH
T ss_pred HHHHHHhCCCcEEEEECCcccccC-hHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHH
Confidence 4789999999999999986 3322 3344444444457899999999999999999999999999999777788999999
Q ss_pred HHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC-----CCCCCCc
Q 026978 80 AIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR-----PFESHDD 154 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~-----~~~~~~~ 154 (230)
+|+++|+|+|||+|.||.+.++..+..|....|.+|..+|+++++.+++||+||||+|++++.+.+.. ... +.
T Consensus 99 aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~--~~ 176 (321)
T 3c1o_A 99 AIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRN--DD 176 (321)
T ss_dssp HHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTT--SC
T ss_pred HHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEeceecccccccccccccccccc--Cc
Confidence 99999768999999998654432332342333499999999999999999999999999876543211 222 56
Q ss_pred EEEecCCCccc-------------------------------------------------C-------------------
Q 026978 155 VVVYGSGEAKA-------------------------------------------------L------------------- 166 (230)
Q Consensus 155 ~~i~g~G~~~~-------------------------------------------------~------------------- 166 (230)
+.++++|+.++ .
T Consensus 177 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 256 (321)
T 3c1o_A 177 IVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQEL 256 (321)
T ss_dssp EEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHHS
T ss_pred eEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHHHHHHHhcC
Confidence 67777777654 0
Q ss_pred CCCCChhhhhhhheeecCCcccccCCCCcchhcccCCCCccccHHHHHHHhhCC-CCCCccccCC
Q 026978 167 PPPEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFLID-PPKPARTAFE 230 (230)
Q Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~p~~~~~t~~e~l~~~~~~-~~~~~~~~~~ 230 (230)
..+.......++.++..|....+.......+.+++||+++++|++||++..+.+ |++|-.+.|.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~ 321 (321)
T 3c1o_A 257 PQPQNIPVSILHSIFVKGDLMSYEMRKDDIEASNLYPELEFTSIDGLLDLFISGRAPPPTLAEFE 321 (321)
T ss_dssp CTTTHHHHHHHHHHHTTCTTTSSCCCSSCEEGGGTCTTCCCCCHHHHHHHHHTTCSCCCCC----
T ss_pred CCchhhhHhhhheeeeccccCCCCCCcccchHhhhCCCCccccHHHHHHHHhcCCCCCCcccccC
Confidence 011111112223333333322233332234567999999999999999999988 9999888774
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-28 Score=203.05 Aligned_cols=162 Identities=37% Similarity=0.694 Sum_probs=127.7
Q ss_pred CHHHHhhCCCeEEEEEcCC-CCCCCc-chHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPV-TQNSRP-SKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~-~~~~~p-~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
|+++|+++||+|++++|+. +... | +|.+.++.+...|++++.+|++|.++|.++++++|+|||+++...+.++.+++
T Consensus 18 l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~ 96 (307)
T 2gas_A 18 IVWASIKAGNPTYALVRKTITAAN-PETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKII 96 (307)
T ss_dssp HHHHHHHHTCCEEEEECCSCCSSC-HHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHH
T ss_pred HHHHHHhCCCcEEEEECCCcccCC-hHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEEECCcccccccHHHHH
Confidence 4789999999999999986 2222 3 45444444545789999999999999999999999999999988888999999
Q ss_pred HHHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC-----CCCCCC
Q 026978 79 HAIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR-----PFESHD 153 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~-----~~~~~~ 153 (230)
+||+++|+|+|||+|.||.+.++..+..|....|.+|..+|+++++.+++||++|||+|++++.+.+.. ... +
T Consensus 97 ~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~--~ 174 (307)
T 2gas_A 97 KAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPR--D 174 (307)
T ss_dssp HHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCS--S
T ss_pred HHHHhcCCceEEeecccccCcccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCC--C
Confidence 999999768999999999755443333453344499999999999999999999999999876543311 122 5
Q ss_pred cEEEecCCCccc
Q 026978 154 DVVVYGSGEAKA 165 (230)
Q Consensus 154 ~~~i~g~G~~~~ 165 (230)
.+.++|+|+.++
T Consensus 175 ~~~~~~~~~~~~ 186 (307)
T 2gas_A 175 KVVILGDGNVKG 186 (307)
T ss_dssp EEEEETTSCSEE
T ss_pred eEEEecCCCcce
Confidence 677788887654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=199.49 Aligned_cols=162 Identities=48% Similarity=0.757 Sum_probs=125.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----ChhhHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----QFLDQLE 76 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----~~~~~~~ 76 (230)
|+++|+++|++|++++|+.+... |++.+.++.+...+++++.+|++|+++|.++++|+|+|||+++.. ++.++.+
T Consensus 20 l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 98 (313)
T 1qyd_A 20 IVNASISLGHPTYVLFRPEVVSN-IDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLK 98 (313)
T ss_dssp HHHHHHHTTCCEEEECCSCCSSC-HHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHH
T ss_pred HHHHHHhCCCcEEEEECCCcccc-hhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECCccccchhhHHHHHH
Confidence 47899999999999999875432 344444444556799999999999999999999999999999876 6788999
Q ss_pred HHHHHHHhCCcceEecccccccCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC------CC
Q 026978 77 IVHAIKVAGNIKRFLPSEFGCEEDK-VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR------PF 149 (230)
Q Consensus 77 ll~Aa~~ag~Vkr~v~S~~g~~~~~-~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~------~~ 149 (230)
+++||+++|+|+|||+|.||.+... ..+..|..++|.+|..+|+++++.|++||++|||+|++++.+.+.. ..
T Consensus 99 l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~ 178 (313)
T 1qyd_A 99 LVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP 178 (313)
T ss_dssp HHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCC
T ss_pred HHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCC
Confidence 9999999976899999999865432 1222343344599999999999999999999999999876543321 12
Q ss_pred CCCCcEEEecCCCccc
Q 026978 150 ESHDDVVVYGSGEAKA 165 (230)
Q Consensus 150 ~~~~~~~i~g~G~~~~ 165 (230)
. +.+.++|+|+.++
T Consensus 179 ~--~~~~~~~~g~~~~ 192 (313)
T 1qyd_A 179 R--DKVLIYGDGNVKG 192 (313)
T ss_dssp S--SEECCBTTSCSEE
T ss_pred C--CeEEEeCCCCceE
Confidence 2 4566677776554
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=143.60 Aligned_cols=152 Identities=18% Similarity=0.246 Sum_probs=113.4
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----Chhh
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP-----QFLD 73 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-----~~~~ 73 (230)
|+++|+++ ||+|++++|+.... + .+...+++++.+|++|.+++.++++++|+|||+++.. ++.+
T Consensus 16 l~~~L~~~~~g~~V~~~~r~~~~~------~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~ 86 (287)
T 2jl1_A 16 VIQHLLKKVPASQIIAIVRNVEKA------S---TLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQ 86 (287)
T ss_dssp HHHHHTTTSCGGGEEEEESCTTTT------H---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEEcCHHHH------h---HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHH
Confidence 47889998 99999999975421 1 2334689999999999999999999999999999863 4678
Q ss_pred HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhccccc-C-CCC
Q 026978 74 QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLL-R-PFE 150 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~-~-~~~ 150 (230)
+.+++++|+++| ++|||+ |+.+... .| .+|..+|..+|+++++.|++++++|||.|++.+...++ . +..
T Consensus 87 ~~~l~~a~~~~~-~~~~v~~Ss~~~~~------~~-~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~ 158 (287)
T 2jl1_A 87 HANVVKAARDAG-VKHIAYTGYAFAEE------SI-IPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTES 158 (287)
T ss_dssp HHHHHHHHHHTT-CSEEEEEEETTGGG------CC-STHHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHH
T ss_pred HHHHHHHHHHcC-CCEEEEECCCCCCC------CC-CchHHHHHHHHHHHHHcCCCeEEEECCEeccccchhhHHHHhhC
Confidence 999999999999 999986 4433321 12 26789999999999999999999999999886522221 1 112
Q ss_pred CCCcEEEecCCCcccCCCCCCh
Q 026978 151 SHDDVVVYGSGEAKALPPPEDI 172 (230)
Q Consensus 151 ~~~~~~i~g~G~~~~~~~~~~~ 172 (230)
+. ..++.|+.++..+..+.
T Consensus 159 --~~-~~~~~~~~~~~~i~~~D 177 (287)
T 2jl1_A 159 --GA-IVTNAGSGIVNSVTRNE 177 (287)
T ss_dssp --TE-EEESCTTCCBCCBCHHH
T ss_pred --Cc-eeccCCCCccCccCHHH
Confidence 22 33566666665554433
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=146.05 Aligned_cols=169 Identities=17% Similarity=0.114 Sum_probs=122.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------- 69 (230)
|+++|+++||+|++++|+.... ....+.+.... ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 41 l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~ 118 (351)
T 3ruf_A 41 LLEKLLKLNQVVIGLDNFSTGH--QYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIV 118 (351)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--HHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCCCc--hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhh
Confidence 5789999999999999986543 11111111110 0689999999999999999999999999999864
Q ss_pred --------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+|+++|+++| ++|||. | .||... ++..+..|...|..+|..+|++++. .|+++
T Consensus 119 ~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~ 197 (351)
T 3ruf_A 119 DPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKT 197 (351)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCE
Confidence 2467899999999999 999985 3 355322 2334445666888999999998864 59999
Q ss_pred EEEeccccchhhcc----------ccc-CCCCCCCcEEEecCCCcccCCCCCChh
Q 026978 130 TFVSANLCGAYFVN----------VLL-RPFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 130 tilr~g~~~~~~~~----------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
+++||+.+++.... .++ .+.. +..+.++|+|+..+..++.+.+
T Consensus 198 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 198 IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLK-GDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp EEEEECSEESTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEHHHH
T ss_pred EEEeeCceeCcCCCCCcchhhHHHHHHHHHHc-CCCcEEeCCCCeEEeeEEHHHH
Confidence 99999988875321 111 1111 2667889999988766655443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=145.39 Aligned_cols=153 Identities=12% Similarity=0.150 Sum_probs=111.4
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-----hhhH
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-----FLDQ 74 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-----~~~~ 74 (230)
|+++|+++ |++|++++|+.+... .+...+++++.+|++|++++.++++++|+|||+++... +.++
T Consensus 16 l~~~L~~~~g~~V~~~~R~~~~~~---------~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~ 86 (289)
T 3e48_A 16 ITNQAIANHIDHFHIGVRNVEKVP---------DDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEV 86 (289)
T ss_dssp HHHHHHHTTCTTEEEEESSGGGSC---------GGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHH
T ss_pred HHHHHhhCCCCcEEEEECCHHHHH---------HhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchhhHHHH
Confidence 46788887 999999999864321 33457999999999999999999999999999998753 5788
Q ss_pred HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccCCCCCCC
Q 026978 75 LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRPFESHD 153 (230)
Q Consensus 75 ~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~~~~~~~ 153 (230)
++++++|+++| ++|||+ |++|...... . .....+..+++.++++|++||++|||+|++.+...+..... .
T Consensus 87 ~~l~~aa~~~g-v~~iv~~Ss~~~~~~~~--~----~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~--~ 157 (289)
T 3e48_A 87 ENLVYAAKQSG-VAHIIFIGYYADQHNNP--F----HMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMN--M 157 (289)
T ss_dssp HHHHHHHHHTT-CCEEEEEEESCCSTTCC--S----TTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHH--H
T ss_pred HHHHHHHHHcC-CCEEEEEcccCCCCCCC--C----ccchhHHHHHHHHHHcCCCEEEEeccccccccHHHHHHHHH--C
Confidence 99999999999 999996 6676432221 1 11223446788888899999999999999865432211111 2
Q ss_pred cEEEecCCCcccCCCCCC
Q 026978 154 DVVVYGSGEAKALPPPED 171 (230)
Q Consensus 154 ~~~i~g~G~~~~~~~~~~ 171 (230)
...+++.|+.++..+..+
T Consensus 158 ~~~~~~~g~~~~~~i~~~ 175 (289)
T 3e48_A 158 HKLIYPAGDGRINYITRN 175 (289)
T ss_dssp TEECCCCTTCEEEEECHH
T ss_pred CCEecCCCCceeeeEEHH
Confidence 334566677665444443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-18 Score=141.78 Aligned_cols=151 Identities=12% Similarity=0.219 Sum_probs=110.5
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---ChhhHH
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---QFLDQL 75 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---~~~~~~ 75 (230)
|+++|+++ ||+|++++|+.... + .+...+++++.+|++|.+++.++++++|+|||+++.. ++.++.
T Consensus 15 l~~~L~~~~~g~~V~~~~r~~~~~------~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 85 (286)
T 2zcu_A 15 VIESLMKTVPASQIVAIVRNPAKA------Q---ALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHR 85 (286)
T ss_dssp HHHHHTTTSCGGGEEEEESCTTTC------H---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--------CHHH
T ss_pred HHHHHHhhCCCceEEEEEcChHhh------h---hhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHHHHHHH
Confidence 47889998 99999999975432 1 2234689999999999999999999999999999853 467899
Q ss_pred HHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC-CCCCCC
Q 026978 76 EIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR-PFESHD 153 (230)
Q Consensus 76 ~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~-~~~~~~ 153 (230)
+++++|+++| ++|||+ |+.+... .| .+|..+|..+|+++++++++++++|||+|++.....+.. ... +
T Consensus 86 ~l~~a~~~~~-~~~~v~~Ss~~~~~------~~-~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~--~ 155 (286)
T 2zcu_A 86 NVINAAKAAG-VKFIAYTSLLHADT------SP-LGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEH--G 155 (286)
T ss_dssp HHHHHHHHHT-CCEEEEEEETTTTT------CC-STTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHHHHH--T
T ss_pred HHHHHHHHcC-CCEEEEECCCCCCC------Cc-chhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHhhcC--C
Confidence 9999999999 999986 4433321 12 257789999999999999999999999988754322111 112 3
Q ss_pred cEEEecCCCcccCCCCCC
Q 026978 154 DVVVYGSGEAKALPPPED 171 (230)
Q Consensus 154 ~~~i~g~G~~~~~~~~~~ 171 (230)
.+ .+++|+.++..+..+
T Consensus 156 ~~-~~~~~~~~~~~i~~~ 172 (286)
T 2zcu_A 156 VF-IGAAGDGKIASATRA 172 (286)
T ss_dssp EE-EESCTTCCBCCBCHH
T ss_pred ce-eccCCCCccccccHH
Confidence 33 367777766555443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=142.33 Aligned_cols=159 Identities=12% Similarity=0.084 Sum_probs=118.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++|++|++++|+.. . . .+ .+++++.+|++ .+++.++++++|+|||+++..
T Consensus 18 l~~~L~~~g~~V~~~~r~~~-~--~-------~~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 84 (311)
T 3m2p_A 18 VVESIKNDGNTPIILTRSIG-N--K-------AI--NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQGKISEFHD 84 (311)
T ss_dssp HHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSSCGGGTHH
T ss_pred HHHHHHhCCCEEEEEeCCCC-c--c-------cC--CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCChHHHHHH
Confidence 47899999999999999832 1 1 12 38999999999 999999999999999999864
Q ss_pred ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEecccc
Q 026978 70 QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANLC 137 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~~ 137 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..|...|..+|..+|+++++ .|++++++||+.+
T Consensus 85 n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v 163 (311)
T 3m2p_A 85 NEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHL 163 (311)
T ss_dssp HHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEE
T ss_pred HHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCce
Confidence 2568899999999999 999985 3 365322 3334455667888999999999876 7999999999998
Q ss_pred chhhcc------ccc-CCCCCCCcEEEecCCCcccCCCCCChhh
Q 026978 138 GAYFVN------VLL-RPFESHDDVVVYGSGEAKALPPPEDIPI 174 (230)
Q Consensus 138 ~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~~ 174 (230)
++.... .++ .... +..+.++|+|+..+..++.+.++
T Consensus 164 ~G~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~v~v~Dva 206 (311)
T 3m2p_A 164 YGFNEKNNYMINRFFRQAFH-GEQLTLHANSVAKREFLYAKDAA 206 (311)
T ss_dssp ECSCC--CCHHHHHHHHHHT-CCCEEESSBCCCCEEEEEHHHHH
T ss_pred eCcCCCCCCHHHHHHHHHHc-CCCeEEecCCCeEEceEEHHHHH
Confidence 874322 111 1111 36788889999877666554433
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-18 Score=138.80 Aligned_cols=148 Identities=18% Similarity=0.271 Sum_probs=113.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCe-EEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGV-TIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv-~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
|+++|+++|++|++++|+.. +.+ .+...++ +++.+|++ +++.+++.++|+|||+++..
T Consensus 37 l~~~L~~~G~~V~~~~R~~~------~~~---~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~ 105 (236)
T 3e8x_A 37 LLSELKNKGHEPVAMVRNEE------QGP---ELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPHTGADKTIL 105 (236)
T ss_dssp HHHHHHHTTCEEEEEESSGG------GHH---HHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTTSCHHHHHH
T ss_pred HHHHHHhCCCeEEEEECChH------HHH---HHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCCCCccccch
Confidence 47899999999999999743 222 3334689 99999998 78999999999999999975
Q ss_pred -ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccC
Q 026978 70 -QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLR 147 (230)
Q Consensus 70 -~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~ 147 (230)
++.++.+++++|+++| ++|||. |++|....+..+ .+...|..+|..+|++++..|+++++||||++++...
T Consensus 106 ~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~----- 178 (236)
T 3e8x_A 106 IDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQGP-MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEES----- 178 (236)
T ss_dssp TTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGSC-GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCC-----
T ss_pred hhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCCh-hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCC-----
Confidence 4678999999999999 999986 777764332111 2455788999999999999999999999999986421
Q ss_pred CCCCCCcEEEecCCCcccCCCCC
Q 026978 148 PFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 148 ~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
. ..+...++++.....+..
T Consensus 179 --~--~~~~~~~~~~~~~~~i~~ 197 (236)
T 3e8x_A 179 --T--GKVTVSPHFSEITRSITR 197 (236)
T ss_dssp --C--SEEEEESSCSCCCCCEEH
T ss_pred --C--CeEEeccCCCcccCcEeH
Confidence 2 445555666554444433
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5e-18 Score=142.19 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=103.8
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-------Chh
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP-------QFL 72 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-------~~~ 72 (230)
|+++|+++| ++|++++|+.... +.+ .+...+++++.+|++|++++.++++++|+|||+++.. ++.
T Consensus 21 l~~~L~~~g~~~V~~~~R~~~~~----~~~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~ 93 (299)
T 2wm3_A 21 VARTLLEDGTFKVRVVTRNPRKK----AAK---ELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVK 93 (299)
T ss_dssp HHHHHHHHCSSEEEEEESCTTSH----HHH---HHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHH
T ss_pred HHHHHHhcCCceEEEEEcCCCCH----HHH---HHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCccccchHHHH
Confidence 478899998 9999999985421 111 2334689999999999999999999999999998742 245
Q ss_pred hHHHHHHHHHHhCCcceEeccc-ccccC-CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcc
Q 026978 73 DQLEIVHAIKVAGNIKRFLPSE-FGCEE-DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVN 143 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vkr~v~S~-~g~~~-~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~ 143 (230)
.+.+++++|+++| ++|||+++ .+... .+. .+..+|+.+|..+|++++++|++|++||||+|++.+..
T Consensus 94 ~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~---~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~ 162 (299)
T 2wm3_A 94 QGKLLADLARRLG-LHYVVYSGLENIKKLTAG---RLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLS 162 (299)
T ss_dssp HHHHHHHHHHHHT-CSEEEECCCCCHHHHTTT---SCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGT
T ss_pred HHHHHHHHHHHcC-CCEEEEEcCccccccCCC---cccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchh
Confidence 7899999999999 99999743 33211 111 12246889999999999999999999999999987554
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=141.40 Aligned_cols=122 Identities=17% Similarity=0.227 Sum_probs=100.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ---------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~---------- 70 (230)
|+++|+++||+|++++|+.. ..+++++.+|++|.+++.++++++|+|||+++...
T Consensus 35 l~~~L~~~G~~V~~~~r~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~ 99 (347)
T 4id9_A 35 VVAALRTQGRTVRGFDLRPS---------------GTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMF 99 (347)
T ss_dssp HHHHHHHTTCCEEEEESSCC---------------SSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCCC---------------CCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcchhhHHHHH
Confidence 57899999999999999743 14688999999999999999999999999998642
Q ss_pred ---hhhHHHHHHHHHHhCCcceEec-c---ccccc------CCCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEe
Q 026978 71 ---FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE------EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVS 133 (230)
Q Consensus 71 ---~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~------~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr 133 (230)
+.++.+++++|+++| ++|||. | .||.. .++..+..|...|..+|..+|++++. .+++++++|
T Consensus 100 ~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 178 (347)
T 4id9_A 100 AVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILR 178 (347)
T ss_dssp HHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEc
Confidence 457899999999999 999985 3 36541 12333445666788999999998864 689999999
Q ss_pred ccccc
Q 026978 134 ANLCG 138 (230)
Q Consensus 134 ~g~~~ 138 (230)
|+.++
T Consensus 179 p~~v~ 183 (347)
T 4id9_A 179 FSHTQ 183 (347)
T ss_dssp ECEEE
T ss_pred cceEe
Confidence 99888
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=131.51 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=102.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC-HHHHHHHhcCCCEEEEcCCCC-------Chh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE-HKKIVSILKEVDVVISTVAYP-------QFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d-~~~L~~al~g~D~Vi~~~~~~-------~~~ 72 (230)
|+++|+++|++|++++|+..... . ..+++++.+|++| .+++.++++++|+|||+++.. ++.
T Consensus 16 l~~~L~~~g~~V~~~~R~~~~~~---------~--~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~ 84 (219)
T 3dqp_A 16 LLKSLSTTDYQIYAGARKVEQVP---------Q--YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLY 84 (219)
T ss_dssp HHHHHTTSSCEEEEEESSGGGSC---------C--CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCH
T ss_pred HHHHHHHCCCEEEEEECCccchh---------h--cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHH
Confidence 47899999999999999864321 1 2689999999999 999999999999999999865 467
Q ss_pred hHHHHHHHHHHhCCcceEec-ccccccCCCC---CCCCchhHHHHHHHHHHHHH-HHcCCCEEEEeccccchh
Q 026978 73 DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKV---RPLPPFEAYLEKKRIVRRAI-EAAQIPYTFVSANLCGAY 140 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~---~~~~p~~~~~~~K~~~e~~l-~~~gl~~tilr~g~~~~~ 140 (230)
++.+++++|+++| ++|||. |+.+...... .+..|...|..+|..+|+++ +..+++|++||||++++.
T Consensus 85 ~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~ 156 (219)
T 3dqp_A 85 GAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEE 156 (219)
T ss_dssp HHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECS
T ss_pred HHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecC
Confidence 8999999999999 999985 4432211110 11123456789999999999 678999999999999864
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-16 Score=125.03 Aligned_cols=129 Identities=15% Similarity=0.178 Sum_probs=101.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------hh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------FL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------~~ 72 (230)
|+++|+++|++|++++|+..... .+...+++++.+|++|.+++.++++++|+|||+++... +.
T Consensus 19 l~~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~n~~ 89 (206)
T 1hdo_A 19 TLAQAVQAGYEVTVLVRDSSRLP---------SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSE 89 (206)
T ss_dssp HHHHHHHTTCEEEEEESCGGGSC---------SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHH
T ss_pred HHHHHHHCCCeEEEEEeChhhcc---------cccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCccchHHH
Confidence 47889999999999999754321 12246899999999999999999999999999998642 46
Q ss_pred hHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccch
Q 026978 73 DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGA 139 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~ 139 (230)
+..+++++|++++ ++|||. |+.+..........+..+|..+|..+|+++++.+++|+++||+.+++
T Consensus 90 ~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~ 156 (206)
T 1hdo_A 90 GARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD 156 (206)
T ss_dssp HHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEEC
T ss_pred HHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCcccC
Confidence 7899999999999 999985 54443211111111345788999999999999999999999999743
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=137.38 Aligned_cols=162 Identities=15% Similarity=0.105 Sum_probs=116.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ---------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~---------- 70 (230)
|+++|+++||+|++++|+..... .+...+++++.+|++|.+++.++++++|+|||+++...
T Consensus 45 l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 115 (379)
T 2c5a_A 45 IARRLKHEGHYVIASDWKKNEHM---------TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHS 115 (379)
T ss_dssp HHHHHHHTTCEEEEEESSCCSSS---------CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHH
T ss_pred HHHHHHHCCCeEEEEECCCccch---------hhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcccccccCHH
Confidence 47889999999999999865321 11235799999999999999999999999999998531
Q ss_pred ------hhhHHHHHHHHHHhCCcceEec-c---cccccC---------CCCC--CCCchhHHHHHHHHHHHHHHH----c
Q 026978 71 ------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE---------DKVR--PLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~---------~~~~--~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
+.++.+++++|+++| ++|||. | .||... ++.. +..|...|..+|..+|++++. .
T Consensus 116 ~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 194 (379)
T 2c5a_A 116 VIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF 194 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence 346789999999999 999985 3 255321 1111 233556788999999998864 5
Q ss_pred CCCEEEEeccccchhhcc----------ccc-CCCCCCCc-EEEecCCCcccCCCCCChh
Q 026978 126 QIPYTFVSANLCGAYFVN----------VLL-RPFESHDD-VVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~----------~~~-~~~~~~~~-~~i~g~G~~~~~~~~~~~~ 173 (230)
|+++++|||+.+++.... .++ .+.. +.. +.++|+|++.+..++.+.+
T Consensus 195 gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~~~~i~v~Dv 253 (379)
T 2c5a_A 195 GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT-STDRFEMWGDGLQTRSFTFIDEC 253 (379)
T ss_dssp CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH-CSSCEEEESCSCCEECCEEHHHH
T ss_pred CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh-CCCceEEeCCCCeeEEEEEHHHH
Confidence 999999999988875321 111 1111 133 7889999887765554433
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=128.22 Aligned_cols=130 Identities=16% Similarity=0.147 Sum_probs=101.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------Ch
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------QF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------~~ 71 (230)
|+++|+++|++|++++|+.+... .+ ..+++++.+|++|.+++.++++++|+|||+++.. ++
T Consensus 20 l~~~L~~~g~~V~~~~r~~~~~~---------~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~ 89 (227)
T 3dhn_A 20 LLNEALNRGFEVTAVVRHPEKIK---------IE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETI 89 (227)
T ss_dssp HHHHHHTTTCEEEEECSCGGGCC---------CC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC------CCSHHH
T ss_pred HHHHHHHCCCEEEEEEcCcccch---------hc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHH
Confidence 47899999999999999864321 22 3689999999999999999999999999999875 46
Q ss_pred hhHHHHHHHHHHhCCcceEec-cccc---ccC---CCCCCCCchhHHHHHHHHHHHHHH----HcCCCEEEEeccccchh
Q 026978 72 LDQLEIVHAIKVAGNIKRFLP-SEFG---CEE---DKVRPLPPFEAYLEKKRIVRRAIE----AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~v~-S~~g---~~~---~~~~~~~p~~~~~~~K~~~e~~l~----~~gl~~tilr~g~~~~~ 140 (230)
.++.+++++|+++| ++|||. |+.+ ... .+..+..|...|..+|...|.+++ +.+++|+++||+.+++.
T Consensus 90 ~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~ 168 (227)
T 3dhn_A 90 KVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRP 168 (227)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEES
T ss_pred HHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCC
Confidence 78999999999999 999986 4322 111 112233455678899999996554 36899999999998764
Q ss_pred h
Q 026978 141 F 141 (230)
Q Consensus 141 ~ 141 (230)
.
T Consensus 169 ~ 169 (227)
T 3dhn_A 169 G 169 (227)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-16 Score=131.81 Aligned_cols=153 Identities=14% Similarity=0.054 Sum_probs=110.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--hhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--FLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--~~~~~~ll 78 (230)
|+++|+++||+|++++|+.. +.+ .+...+++++.+|++|.+ ++++|+|||+++... .....+++
T Consensus 20 l~~~L~~~g~~V~~~~r~~~------~~~---~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~~~~~l~ 85 (286)
T 3ius_A 20 LSRALAPQGWRIIGTSRNPD------QME---AIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDPVLAALG 85 (286)
T ss_dssp HHHHHGGGTCEEEEEESCGG------GHH---HHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEcChh------hhh---hHhhCCCeEEEecccccc-----cCCCCEEEECCCccccccHHHHHHH
Confidence 47899999999999999743 222 233478999999999944 889999999998764 34578999
Q ss_pred HHHHH--hCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHHc-CCCEEEEeccccchhhcccccC
Q 026978 79 HAIKV--AGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEAA-QIPYTFVSANLCGAYFVNVLLR 147 (230)
Q Consensus 79 ~Aa~~--ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~~-gl~~tilr~g~~~~~~~~~~~~ 147 (230)
++|++ .+ ++|||+ | .||... ++..+..|...|..+|..+|+++++. +++++++||+.+++.....+..
T Consensus 86 ~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~ 164 (286)
T 3ius_A 86 DQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSK 164 (286)
T ss_dssp HHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTT
T ss_pred HHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHH
Confidence 99999 78 999985 3 355422 23344556667889999999999997 9999999999998765332222
Q ss_pred CCCCCCcEEEecCCCcccCCCCC
Q 026978 148 PFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 148 ~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
+.. +....+.+++ +.+..++.
T Consensus 165 ~~~-~~~~~~~~~~-~~~~~i~v 185 (286)
T 3ius_A 165 LGK-GGIRRIIKPG-QVFSRIHV 185 (286)
T ss_dssp SSS-SCCCEEECTT-CCBCEEEH
T ss_pred Hhc-CCccccCCCC-cccceEEH
Confidence 222 2456666654 44444433
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=134.67 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=118.8
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~------ 69 (230)
|+++|+++| +.|++++|...... . +.+..+ ...+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 40 l~~~L~~~g~~~~v~~~~~~~~~~~-~---~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~ 115 (346)
T 4egb_A 40 FVHYMLQSYETYKIINFDALTYSGN-L---NNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSI 115 (346)
T ss_dssp HHHHHHHHCTTEEEEEEECCCTTCC-G---GGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEECCCCC------
T ss_pred HHHHHHhhCCCcEEEEEeccccccc-h---hhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhh
Confidence 578999999 66777777653321 1 122222 235899999999999999999998 99999999864
Q ss_pred ---------ChhhHHHHHHHHHHhCCcceEec-c---ccccc-----CCCCCCCCchhHHHHHHHHHHHHHHH----cCC
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCE-----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQI 127 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~-----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl 127 (230)
++.++.+++++|+++| ++|||. | .||.. .++..+..|...|..+|..+|++++. .|+
T Consensus 116 ~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~ 194 (346)
T 4egb_A 116 ENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQL 194 (346)
T ss_dssp ---CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Confidence 2457899999999999 999985 3 35542 12334445667888999999998876 699
Q ss_pred CEEEEeccccchhhcc------ccc-CCCCCCCcEEEecCCCcccCCCCCCh
Q 026978 128 PYTFVSANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKALPPPEDI 172 (230)
Q Consensus 128 ~~tilr~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~ 172 (230)
+++++||+.+++.... .++ .... ++.+.++|+|+..+..++.+.
T Consensus 195 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D 245 (346)
T 4egb_A 195 PVIVTRCSNNYGPYQYPEKLIPLMVTNALE-GKKLPLYGDGLNVRDWLHVTD 245 (346)
T ss_dssp CEEEEEECEEESTTCCTTSHHHHHHHHHHT-TCCCEEETTSCCEECEEEHHH
T ss_pred CEEEEeecceeCcCCCccchHHHHHHHHHc-CCCceeeCCCCeEEeeEEHHH
Confidence 9999999988875321 111 1111 266888999988776555433
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-16 Score=125.68 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=101.5
Q ss_pred CHHHHh-hCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASV-SSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll-~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|+++|+ ++|++|++++|+... +.+.+.. ...+++++.+|++|.+++.++++++|+|||+++..++. .+++++
T Consensus 21 ~~~~l~~~~g~~V~~~~r~~~~-----~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~ 93 (221)
T 3r6d_A 21 LTATLLTYTDMHITLYGRQLKT-----RIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVK 93 (221)
T ss_dssp HHHHHHHHCCCEEEEEESSHHH-----HSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHH
T ss_pred HHHHHHhcCCceEEEEecCccc-----cchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHH
Confidence 478899 899999999997430 2111111 35689999999999999999999999999999987777 999999
Q ss_pred HHHHhCCcceEec-ccccccCCCCCCC------CchhHHHHHHHHHHHHHHHcCCCEEEEeccccchh
Q 026978 80 AIKVAGNIKRFLP-SEFGCEEDKVRPL------PPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAY 140 (230)
Q Consensus 80 Aa~~ag~Vkr~v~-S~~g~~~~~~~~~------~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~ 140 (230)
++++.| ++|||. |+.+......... .....|..+|..+|+++++.+++|++||||++++.
T Consensus 94 ~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 94 ALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECC
T ss_pred HHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCC
Confidence 999999 999985 4433221110000 00016778999999999999999999999999764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-16 Score=133.63 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=111.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEec-CCCHHHHHHHhcCCCEEEEcCCCCC---hhhHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGE-LDEHKKIVSILKEVDVVISTVAYPQ---FLDQLE 76 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD-~~d~~~L~~al~g~D~Vi~~~~~~~---~~~~~~ 76 (230)
|+++|+++||+|++++|+.+.. +.+.+.. ..+++++.+| ++|.+++.++++++|+|||+++... ....++
T Consensus 21 l~~~L~~~g~~V~~~~R~~~~~----~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~~~ 94 (352)
T 1xgk_A 21 LIRVAAAVGHHVRAQVHSLKGL----IAEELQA--IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKD 94 (352)
T ss_dssp HHHHHHHTTCCEEEEESCSCSH----HHHHHHT--STTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHH
T ss_pred HHHHHHhCCCEEEEEECCCChh----hHHHHhh--cCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCCcHHHHHHHH
Confidence 4788999999999999986431 1122211 2489999999 9999999999999999999987541 234499
Q ss_pred HHHHHHHhCCcceEec-cccc-ccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhccc---ccC---C
Q 026978 77 IVHAIKVAGNIKRFLP-SEFG-CEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNV---LLR---P 148 (230)
Q Consensus 77 ll~Aa~~ag~Vkr~v~-S~~g-~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~---~~~---~ 148 (230)
++++|+++|+++|||+ |+.+ ...... +..+|+.+|..+|+++++.++++++||||+|....... ++. .
T Consensus 95 l~~aa~~~g~v~~~V~~SS~~~~~~~~~----~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~ 170 (352)
T 1xgk_A 95 LADAAKRAGTIQHYIYSSMPDHSLYGPW----PAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELM 170 (352)
T ss_dssp HHHHHHHHSCCSEEEEEECCCGGGTSSC----CCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEEC
T ss_pred HHHHHHHcCCccEEEEeCCccccccCCC----CCccHHHHHHHHHHHHHHcCCCEEEEecceecCCchhccccccccccc
Confidence 9999999875799986 3332 111111 22467799999999999999999999999887654321 111 1
Q ss_pred CCCCCcE--EEecCCCcccCCCCC
Q 026978 149 FESHDDV--VVYGSGEAKALPPPE 170 (230)
Q Consensus 149 ~~~~~~~--~i~g~G~~~~~~~~~ 170 (230)
.. +.. .++++|+.++..+..
T Consensus 171 ~~--g~~~~~~~~~~~~~~~~i~v 192 (352)
T 1xgk_A 171 PD--GTFEWHAPFDPDIPLPWLDA 192 (352)
T ss_dssp TT--SCEEEEESSCTTSCEEEECH
T ss_pred CC--CceEEeeccCCCCceeeEec
Confidence 22 333 457778877766653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=132.93 Aligned_cols=159 Identities=15% Similarity=0.157 Sum_probs=113.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++||+|++++|+..... .+...+++++.+|+.|.+ +.+++++ |+|||+++..
T Consensus 16 l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~ 84 (312)
T 3ko8_A 16 LVDKLVELGYEVVVVDNLSSGRR---------EFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPIV 84 (312)
T ss_dssp HHHHHHHTTCEEEEECCCSSCCG---------GGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHHH
T ss_pred HHHHHHhCCCEEEEEeCCCCCch---------hhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhhhhCHHH
Confidence 57899999999999999865431 122568999999999998 9999999 9999999853
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEe
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVS 133 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr 133 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..|...|..+|..+|++++. .|++++++|
T Consensus 85 ~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lr 163 (312)
T 3ko8_A 85 HFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVR 163 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 2567899999999999 999985 3 365322 2334445666888999999998865 599999999
Q ss_pred ccccchhhccc-----cc-CCCCCCCcEEEecCCCcccCCCCCC
Q 026978 134 ANLCGAYFVNV-----LL-RPFESHDDVVVYGSGEAKALPPPED 171 (230)
Q Consensus 134 ~g~~~~~~~~~-----~~-~~~~~~~~~~i~g~G~~~~~~~~~~ 171 (230)
|+.+++..... ++ .+......+.++|+|++.+..++.+
T Consensus 164 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 207 (312)
T 3ko8_A 164 YANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVR 207 (312)
T ss_dssp ECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHH
T ss_pred eccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHH
Confidence 99888653211 11 1111115677899998877655543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-17 Score=135.93 Aligned_cols=151 Identities=14% Similarity=0.069 Sum_probs=112.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-CCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-VDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-~D~Vi~~~~~~---------- 69 (230)
|+++|+++||+|++++|+.+.. ..+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 18 l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~ 84 (286)
T 3gpi_A 18 LARRLTAQGHEVTGLRRSAQPM-------------PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLS 84 (286)
T ss_dssp HHHHHHHTTCCEEEEECTTSCC-------------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC-----CC
T ss_pred HHHHHHHCCCEEEEEeCCcccc-------------ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHH
Confidence 5789999999999999985421 36899999999999999999998 99999999753
Q ss_pred ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhh
Q 026978 70 QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~ 141 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..|...|..+|..+|++ ++. ++++++||+.+++..
T Consensus 85 n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~~v~G~~ 161 (286)
T 3gpi_A 85 YVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRFSGIYGPG 161 (286)
T ss_dssp SHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEECEEEBTT
T ss_pred HHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEecccccCCC
Confidence 4778999999999999 999985 3 365432 3334455666888999999999 777 999999999988754
Q ss_pred cccccCCCCCCCcEEEecCCCcccCCCCC
Q 026978 142 VNVLLRPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 142 ~~~~~~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
...++.... . ...+++|+..+..+..
T Consensus 162 ~~~~~~~~~--~-~~~~~~~~~~~~~i~v 187 (286)
T 3gpi_A 162 RLRMIRQAQ--T-PEQWPARNAWTNRIHR 187 (286)
T ss_dssp BCHHHHHTT--C-GGGSCSSBCEECEEEH
T ss_pred chhHHHHHH--h-cccCCCcCceeEEEEH
Confidence 332211001 1 1123667666554444
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=129.87 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=100.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++||+|++++|+.... + .+...+++++.+|++|.+++.++++++|+|||+++..
T Consensus 29 l~~~L~~~g~~V~~~~r~~~~~------~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~ 99 (342)
T 2x4g_A 29 AARAIRAAGHDLVLIHRPSSQI------Q---RLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEV 99 (342)
T ss_dssp HHHHHHHTTCEEEEEECTTSCG------G---GGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC------------CHH
T ss_pred HHHHHHHCCCEEEEEecChHhh------h---hhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHH
Confidence 4789999999999999975432 1 2333489999999999999999999999999999853
Q ss_pred --ChhhHHHHHHHHHHhCCcceEec-cc---ccccC-----CCCCCCCc----hhHHHHHHHHHHHHHHH---cCCCEEE
Q 026978 70 --QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE-----DKVRPLPP----FEAYLEKKRIVRRAIEA---AQIPYTF 131 (230)
Q Consensus 70 --~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~-----~~~~~~~p----~~~~~~~K~~~e~~l~~---~gl~~ti 131 (230)
++.++.+++++|+++| ++|||. |+ ||... ++..+..| ...|..+|..+|+++++ .|+++++
T Consensus 100 ~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~i 178 (342)
T 2x4g_A 100 ASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVI 178 (342)
T ss_dssp HHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 2567899999999999 999985 32 44321 23334445 56788999999998876 3899999
Q ss_pred Eeccccchhh
Q 026978 132 VSANLCGAYF 141 (230)
Q Consensus 132 lr~g~~~~~~ 141 (230)
+||+.+++..
T Consensus 179 lrp~~v~g~~ 188 (342)
T 2x4g_A 179 GIPGMVLGEL 188 (342)
T ss_dssp EEECEEECSC
T ss_pred EeCCceECCC
Confidence 9999987643
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=137.31 Aligned_cols=161 Identities=17% Similarity=0.180 Sum_probs=117.5
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC-CHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD-EHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~-d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++ ||+|++++|+..... .+ ....+++++.+|++ |.+++.++++++|+|||+++...
T Consensus 40 l~~~L~~~~g~~V~~~~r~~~~~~------~~--~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 111 (372)
T 3slg_A 40 LSKRILETTDWEVFGMDMQTDRLG------DL--VKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQP 111 (372)
T ss_dssp HHHHHHHHSSCEEEEEESCCTTTG------GG--GGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCH
T ss_pred HHHHHHhCCCCEEEEEeCChhhhh------hh--ccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCH
Confidence 57889998 999999999865321 11 12478999999999 99999999999999999998653
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-c---cccccCC----CCCCC-------CchhHHHHHHHHHHHHHHHc---
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEED----KVRPL-------PPFEAYLEKKRIVRRAIEAA--- 125 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~~----~~~~~-------~p~~~~~~~K~~~e~~l~~~--- 125 (230)
+.++.+|+++|+++| +|||+ | .||.... +.... .|...|..+|..+|+++++.
T Consensus 112 ~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~ 189 (372)
T 3slg_A 112 LRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME 189 (372)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC
Confidence 356789999999998 78885 3 3664221 11111 35557889999999999875
Q ss_pred CCCEEEEeccccchhhcc--------------ccc-CCCCCCCcEEEecCCCcccCCCCCCh
Q 026978 126 QIPYTFVSANLCGAYFVN--------------VLL-RPFESHDDVVVYGSGEAKALPPPEDI 172 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~--------------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~ 172 (230)
|++++++||+.+++.... .++ .+.. ++.+.++|+|+..+..+..+.
T Consensus 190 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~D 250 (372)
T 3slg_A 190 GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GENISLVDGGSQKRAFTYVDD 250 (372)
T ss_dssp TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH-TCCEEEGGGGCCEEECEEHHH
T ss_pred CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc-CCCcEEeCCCceEEEEEEHHH
Confidence 999999999988765421 111 1111 267888999988776665543
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.1e-16 Score=134.81 Aligned_cols=164 Identities=13% Similarity=0.068 Sum_probs=116.0
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++| ++|++++|+..... + .+. ..+++++.+|++|.+++.++++++|+|||+++...
T Consensus 48 l~~~L~~~g~~~V~~~~r~~~~~~-----~---~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~ 119 (377)
T 2q1s_A 48 LVKRLLELGVNQVHVVDNLLSAEK-----I---NVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDP 119 (377)
T ss_dssp HHHHHHHTTCSEEEEECCCTTCCG-----G---GSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCH
T ss_pred HHHHHHHcCCceEEEEECCCCCch-----h---hccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCH
Confidence 478999999 99999999764321 1 122 46899999999999999999999999999998652
Q ss_pred -------hhhHHHHHHHHHHh-CCcceEec-c---cccccC----C--CCC---CC-CchhHHHHHHHHHHHHHHH----
Q 026978 71 -------FLDQLEIVHAIKVA-GNIKRFLP-S---EFGCEE----D--KVR---PL-PPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~a-g~Vkr~v~-S---~~g~~~----~--~~~---~~-~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.++.+|+++|+++ + ++|||. | .||... + +.. +. .|..+|..+|..+|++++.
T Consensus 120 ~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 198 (377)
T 2q1s_A 120 LADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQ 198 (377)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 35789999999999 8 999985 3 355321 1 222 33 4556788999999998875
Q ss_pred cCCCEEEEeccccchhhc---------c------c----cc-CCCCCCCcEEEecCCCcccCCCCCChhh
Q 026978 125 AQIPYTFVSANLCGAYFV---------N------V----LL-RPFESHDDVVVYGSGEAKALPPPEDIPI 174 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~---------~------~----~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~~ 174 (230)
.|++++++||+.+++... . . ++ .... +..+.++|+|+..+..+..+.++
T Consensus 199 ~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v~Dva 267 (377)
T 2q1s_A 199 HQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK-GMPLPLENGGVATRDFIFVEDVA 267 (377)
T ss_dssp HCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT-TCCCCCSGGGCCEECCEEHHHHH
T ss_pred hCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc-CCCeEEeCCCCeEEeeEEHHHHH
Confidence 499999999998886433 1 1 11 1111 24566788888777665554433
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=128.96 Aligned_cols=137 Identities=13% Similarity=0.195 Sum_probs=104.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++|++|++++|+..... +..+.+......+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 98 (341)
T 3enk_A 21 TAVELLAHGYDVVIADNLVNSKR--EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKP 98 (341)
T ss_dssp HHHHHHHTTCEEEEECCCSSSCT--HHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCH
T ss_pred HHHHHHHCCCcEEEEecCCcchH--HHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECccccccCccccCh
Confidence 47899999999999999865432 11122222224589999999999999999999 899999999875
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----c-CCCEE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----A-QIPYT 130 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~-gl~~t 130 (230)
++.++.+++++|++.| ++|||. | .||... ++..+..|...|..+|..+|++++. . +++++
T Consensus 99 ~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 177 (341)
T 3enk_A 99 IEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVA 177 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEE
Confidence 2457899999999999 999985 3 365422 2233444556788999999998875 2 59999
Q ss_pred EEeccccchh
Q 026978 131 FVSANLCGAY 140 (230)
Q Consensus 131 ilr~g~~~~~ 140 (230)
++||+..++.
T Consensus 178 ~lRp~~v~G~ 187 (341)
T 3enk_A 178 TLRYFNPVGA 187 (341)
T ss_dssp EEEECEEECC
T ss_pred EEeeccccCC
Confidence 9999877764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.7e-16 Score=125.48 Aligned_cols=148 Identities=13% Similarity=0.179 Sum_probs=92.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------ChhhH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------QFLDQ 74 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------~~~~~ 74 (230)
|+++|+++|++|++++|+.. +.+ .+. .+++++.+|++|.++ +++.++|+|||+++.. ++.++
T Consensus 16 l~~~L~~~g~~V~~~~R~~~------~~~---~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~~~~ 83 (221)
T 3ew7_A 16 ILEEAKNRGHEVTAIVRNAG------KIT---QTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAEKHVTSL 83 (221)
T ss_dssp HHHHHHHTTCEEEEEESCSH------HHH---HHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTTSHHHHH
T ss_pred HHHHHHhCCCEEEEEEcCch------hhh---hcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccchHHHHH
Confidence 47899999999999999742 322 232 689999999999887 8899999999999875 35788
Q ss_pred HHHHHHHHHhCCcceEec-ccccc----cC----CCCCCCCchhHHHHHHHHHHHH--HH--HcCCCEEEEeccccchhh
Q 026978 75 LEIVHAIKVAGNIKRFLP-SEFGC----EE----DKVRPLPPFEAYLEKKRIVRRA--IE--AAQIPYTFVSANLCGAYF 141 (230)
Q Consensus 75 ~~ll~Aa~~ag~Vkr~v~-S~~g~----~~----~~~~~~~p~~~~~~~K~~~e~~--l~--~~gl~~tilr~g~~~~~~ 141 (230)
++++++|+++| ++|+|. |+.+. .. .+..+..|...|..+|...|.+ ++ .++++||+|||+.+++..
T Consensus 84 ~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~ 162 (221)
T 3ew7_A 84 DHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG 162 (221)
T ss_dssp HHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC
T ss_pred HHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCC
Confidence 99999999998 899874 44321 11 0111111222244667766654 66 689999999999998752
Q ss_pred cccc-cCCCCCCCcEEEecCCCc
Q 026978 142 VNVL-LRPFESHDDVVVYGSGEA 163 (230)
Q Consensus 142 ~~~~-~~~~~~~~~~~i~g~G~~ 163 (230)
.... +.... +.+.+.++|..
T Consensus 163 ~~~~~~~~~~--~~~~~~~~~~~ 183 (221)
T 3ew7_A 163 ERTGDYQIGK--DHLLFGSDGNS 183 (221)
T ss_dssp -----------------------
T ss_pred CccCceEecc--ccceecCCCCc
Confidence 1111 22222 44556666653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-16 Score=130.86 Aligned_cols=157 Identities=11% Similarity=0.022 Sum_probs=114.3
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC-------
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~------- 69 (230)
|+++|+++ ||+|++++|+.... .+ ..+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 l~~~L~~~~~g~~V~~~~r~~~~~----------~~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 86 (312)
T 2yy7_A 18 LTQKLRKLYGTENVIASDIRKLNT----------DV-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKN 86 (312)
T ss_dssp HHHHHHHHHCGGGEEEEESCCCSC----------HH-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEEcCCCccc----------cc-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCCchhhC
Confidence 47889998 89999999975431 11 1368899999999999999999 999999999864
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---cccccC-----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE-----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~-----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..|..+|..+|..+|++++. .|+++
T Consensus 87 ~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 165 (312)
T 2yy7_A 87 PAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDV 165 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhcCCcE
Confidence 2457889999999999 999985 3 355321 1223334566788999999998864 48999
Q ss_pred EEEeccccchhhc-c----------ccc-CCCCCCCcEEEecCCCcccCCCCCC
Q 026978 130 TFVSANLCGAYFV-N----------VLL-RPFESHDDVVVYGSGEAKALPPPED 171 (230)
Q Consensus 130 tilr~g~~~~~~~-~----------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~ 171 (230)
+++||+.+++... + .+. .+.. +.+.++++|++.+..++.+
T Consensus 166 ~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~ 217 (312)
T 2yy7_A 166 RSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD--KKYECFLSSETKMPMMYMD 217 (312)
T ss_dssp ECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT--SEEEESSCTTCCEEEEEHH
T ss_pred EEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC--CCeEEecCCCceeeeeeHH
Confidence 9999988876321 1 011 1223 5677888888766544443
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.6e-15 Score=125.72 Aligned_cols=167 Identities=14% Similarity=0.051 Sum_probs=115.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~------- 70 (230)
|+++|+++|++|++++|+..... ..+ +..+ ...+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 30 l~~~L~~~g~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~ 105 (335)
T 1rpn_A 30 LAKLLLEKGYRVHGLVARRSSDT-RWR---LRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQ 105 (335)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CHH---HHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTS
T ss_pred HHHHHHHCCCeEEEEeCCCcccc-ccc---hhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhC
Confidence 47889999999999999865421 111 2222 235789999999999999999996 599999998642
Q ss_pred --------hhhHHHHHHHHHHhCCc-ceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 71 --------FLDQLEIVHAIKVAGNI-KRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~V-kr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
+.++.+++++|+++| + +|||. | .||... ++..+..|...|..+|..+|.+++. .++++
T Consensus 106 ~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 184 (335)
T 1rpn_A 106 PVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHA 184 (335)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHcCCcE
Confidence 346889999999998 8 89885 3 355321 2333445566788999999998875 49999
Q ss_pred EEEeccccchhhcc---------ccc-CCCCCCCcEEEecCCCcccCCCCCCh
Q 026978 130 TFVSANLCGAYFVN---------VLL-RPFESHDDVVVYGSGEAKALPPPEDI 172 (230)
Q Consensus 130 tilr~g~~~~~~~~---------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~ 172 (230)
+++|++..++.... .++ ...........+|+|++.+..++.+.
T Consensus 185 ~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~D 237 (335)
T 1rpn_A 185 SSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD 237 (335)
T ss_dssp EEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred EEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHH
Confidence 99998766553211 111 11110123456799988776555433
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.1e-15 Score=125.81 Aligned_cols=182 Identities=18% Similarity=0.230 Sum_probs=122.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++| .|++++|..... . .....+++++.+|++| +++.++++++|+|||+++..
T Consensus 17 l~~~L~~~g-~~v~~~~~~~~~--~-------~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~ 85 (313)
T 3ehe_A 17 VVDKLSESN-EIVVIDNLSSGN--E-------EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRIGAENPDE 85 (313)
T ss_dssp HHHHHTTTS-CEEEECCCSSCC--G-------GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHH
T ss_pred HHHHHHhCC-CEEEEEcCCCCC--h-------hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhhhhhCHHH
Confidence 478899999 555666543321 1 1124689999999999 99999999999999999853
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEe
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVS 133 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr 133 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..|...|..+|..+|.+++. .|++++++|
T Consensus 86 ~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilR 164 (313)
T 3ehe_A 86 IYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYR 164 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 2468899999999999 999885 3 365321 2233445666788999999998865 699999999
Q ss_pred ccccchhhccc-----cc-CCCCCCCcEEEecCCCcccCCCCC-ChhhhhhhheeecCCcccccCCCC
Q 026978 134 ANLCGAYFVNV-----LL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLAKGDSMNFELGED 194 (230)
Q Consensus 134 ~g~~~~~~~~~-----~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 194 (230)
|+.+++..... ++ .....+..+.++|+|++.+..++. |++..+...+........|+++++
T Consensus 165 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~ 232 (313)
T 3ehe_A 165 FANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSE 232 (313)
T ss_dssp CSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCS
T ss_pred eccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECCC
Confidence 99988753221 11 111111567789999887766655 444444333321112234666543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-15 Score=128.20 Aligned_cols=174 Identities=13% Similarity=0.066 Sum_probs=119.9
Q ss_pred CHHHHhh--CCCeEEEEEcCCCCCC----CcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCC----
Q 026978 1 MVKASVS--SGHKTFVYARPVTQNS----RPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~--~g~~V~~l~R~~~~~~----~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~---- 69 (230)
|+++|++ +|++|++++|+..... ..++......+...+++++.+|++|.+++.++ ..++|+|||+++..
T Consensus 26 l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~ 105 (362)
T 3sxp_A 26 LAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTM 105 (362)
T ss_dssp HHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGC
T ss_pred HHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCCCEEEECCccCCccc
Confidence 4788999 9999999999765100 00000011123345789999999999999999 88999999999854
Q ss_pred ---------ChhhHHHHHHHHHHhCCcceEec-c---cccccC---CCCCCCCchhHHHHHHHHHHHHHHHcC--CCEEE
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE---DKVRPLPPFEAYLEKKRIVRRAIEAAQ--IPYTF 131 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~---~~~~~~~p~~~~~~~K~~~e~~l~~~g--l~~ti 131 (230)
++.++.+++++|++.| ++ ||. | .||... ++..+..|..+|..+|..+|++++... +++++
T Consensus 106 ~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~ 183 (362)
T 3sxp_A 106 LNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVG 183 (362)
T ss_dssp CCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEE
Confidence 2468899999999999 88 874 3 365422 233444566778899999999999854 89999
Q ss_pred Eeccccchhhcc------c----cc-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 132 VSANLCGAYFVN------V----LL-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 132 lr~g~~~~~~~~------~----~~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
|||+..++.... . ++ .... +..+.++|+|++.+..+.. |++.++.
T Consensus 184 lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva~ai~ 240 (362)
T 3sxp_A 184 LRYFNVYGPREFYKEKTASMVLQLALGAMA-FKEVKLFEFGEQLRDFVYIEDVIQANV 240 (362)
T ss_dssp EEECSEESTTCGGGGGGSCHHHHHHHHHHT-TSEEECSGGGCCEEECEEHHHHHHHHH
T ss_pred EEeCceeCcCCCCCCcchhHHHHHHHHHHh-CCCeEEECCCCeEEccEEHHHHHHHHH
Confidence 999877754321 1 11 1111 2667778998877655554 4444333
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=6.5e-14 Score=118.78 Aligned_cols=160 Identities=13% Similarity=0.204 Sum_probs=114.7
Q ss_pred CHHHHhhC---C---CeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---
Q 026978 1 MVKASVSS---G---HKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~---g---~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--- 70 (230)
|+++|+++ | ++|++++|+..... +++ +..+. ..+++++.+|++|.+++.+++.++|+|||+++...
T Consensus 16 l~~~L~~~~~~g~~~~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~ 91 (337)
T 1r6d_A 16 FVRQLLAGAYPDVPADEVIVLDSLTYAGN-RAN---LAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDR 91 (337)
T ss_dssp HHHHHHHTSCTTSCCSEEEEEECCCTTCC-GGG---GGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHH
T ss_pred HHHHHHhhhcCCCCceEEEEEECCCccCc-hhh---hhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEEEECCCccCchh
Confidence 47889996 8 99999999753221 212 22221 35799999999999999999999999999998642
Q ss_pred ------------hhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 71 ------------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
+.++.+++++|++.+ ++|||. | .||.. .++..+..|...|..+|..+|++++. .+
T Consensus 92 ~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g 170 (337)
T 1r6d_A 92 SIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG 170 (337)
T ss_dssp HHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHC
Confidence 457899999999999 999985 3 36542 12233444556788999999998764 59
Q ss_pred CCEEEEeccccchhhcc------ccc-CCCCCCCcEEEecCCCcccC
Q 026978 127 IPYTFVSANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKAL 166 (230)
Q Consensus 127 l~~tilr~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~ 166 (230)
++++++||+.+++.... .++ .... +..+.++|+|++.+.
T Consensus 171 ~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 216 (337)
T 1r6d_A 171 LDVRITRCCNNYGPYQHPEKLIPLFVTNLLD-GGTLPLYGDGANVRE 216 (337)
T ss_dssp CCEEEEEECEEECTTCCTTSHHHHHHHHHHT-TCCEEEETTSCCEEE
T ss_pred CCEEEEEeeeeECCCCCCCChHHHHHHHHhc-CCCcEEeCCCCeeEe
Confidence 99999999988764321 111 1111 256778898887653
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-14 Score=118.25 Aligned_cols=126 Identities=14% Similarity=0.100 Sum_probs=99.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++|++|++++|+.... + ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 18 l~~~L~~~g~~V~~~~r~~~~~-----------~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~ 85 (267)
T 3ay3_A 18 IRPHLGTLAHEVRLSDIVDLGA-----------A-EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQA 85 (267)
T ss_dssp HGGGGGGTEEEEEECCSSCCCC-----------C-CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCCccc-----------c-CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCCHHHHHHH
Confidence 4678999999999999986421 1 2578999999999999999999999999999863
Q ss_pred ChhhHHHHHHHHHHhCCcceEec-cc---cccc-----CCCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEeccc
Q 026978 70 QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE-----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANL 136 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~-----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~ 136 (230)
++.++.+++++|+++| ++|||. |+ ||.. .++..+..|...|..+|..+|.+++. .+++++++||+.
T Consensus 86 n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~ 164 (267)
T 3ay3_A 86 NIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGS 164 (267)
T ss_dssp THHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECB
T ss_pred HHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEecee
Confidence 3567899999999999 999885 32 4431 12233444556788999999998764 689999999998
Q ss_pred cch
Q 026978 137 CGA 139 (230)
Q Consensus 137 ~~~ 139 (230)
+++
T Consensus 165 v~~ 167 (267)
T 3ay3_A 165 CFP 167 (267)
T ss_dssp CSS
T ss_pred ecC
Confidence 763
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.1e-14 Score=120.29 Aligned_cols=166 Identities=14% Similarity=0.084 Sum_probs=117.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-h---cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l---~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~------ 70 (230)
|+++|+++|++|++++|+.... .++.+.+.. + ...+++++.+|++|.+++.++++++|+|||+++...
T Consensus 43 l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~ 120 (352)
T 1sb8_A 43 LLETLLKLDQKVVGLDNFATGH--QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSIN 120 (352)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCccc--hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhh
Confidence 4788999999999999976432 111111110 1 025899999999999999999999999999998642
Q ss_pred ---------hhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 71 ---------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 71 ---------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
+.++.+++++|+++| ++|||. | .||... ++..+..|...|..+|..+|++++. .|+++
T Consensus 121 ~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~ 199 (352)
T 1sb8_A 121 DPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFST 199 (352)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 457899999999999 999985 3 354321 2333334556788999999998864 59999
Q ss_pred EEEeccccchhhcc-c---------cc-CCCCCCCcEEEecCCCcccCCCCC
Q 026978 130 TFVSANLCGAYFVN-V---------LL-RPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 130 tilr~g~~~~~~~~-~---------~~-~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
+++||+.+++.... . ++ .+.. +..+.++|+|++.+..+..
T Consensus 200 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v 250 (352)
T 1sb8_A 200 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFCYI 250 (352)
T ss_dssp EEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEH
T ss_pred EEEEECceeCcCCCCCcchhhHHHHHHHHHHC-CCCcEEeCCCCceEeeEEH
Confidence 99999988864321 0 11 1111 2556788999877655544
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=117.75 Aligned_cols=130 Identities=17% Similarity=0.222 Sum_probs=94.8
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCCh-hhHHHHH
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQF-LDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~-~~~~~ll 78 (230)
|+++|+++| ++|++++|+..... .+...+++++.+|++|.+++.++++++|+|||+++.... ...++++
T Consensus 39 l~~~L~~~G~~~V~~~~R~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~ 109 (236)
T 3qvo_A 39 VINQLADKQTIKQTLFARQPAKIH---------KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVI 109 (236)
T ss_dssp HHHHHTTCTTEEEEEEESSGGGSC---------SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEEEcChhhhc---------ccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHH
Confidence 478899999 99999999854321 233468999999999999999999999999999987664 3578899
Q ss_pred HHHHHhCCcceEec-cc---ccccCCCCCCC-Cc-hhHHHHHHHHHHHHHHHcCCCEEEEeccccchh
Q 026978 79 HAIKVAGNIKRFLP-SE---FGCEEDKVRPL-PP-FEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAY 140 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v~-S~---~g~~~~~~~~~-~p-~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~ 140 (230)
++|+++| ++|||. |+ |+......... .. ...+...+..+++.++..|++|++||||++++.
T Consensus 110 ~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~ 176 (236)
T 3qvo_A 110 AAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDE 176 (236)
T ss_dssp HHHHHTT-CCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECC
T ss_pred HHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCC
Confidence 9999999 999985 43 32211100000 00 012234566778888889999999999998764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.9e-14 Score=120.54 Aligned_cols=162 Identities=14% Similarity=0.146 Sum_probs=114.7
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++ ||+|++++|+..... .+ .+..+...+++++.+|++|.+++.++++++|+|||+++...
T Consensus 20 l~~~L~~~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 95 (348)
T 1oc2_A 20 FVHYVYNNHPDVHVTVLDKLTYAGN-KA---NLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDP 95 (348)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCC-GG---GTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCC
T ss_pred HHHHHHHhCCCCEEEEEeCCCCCCC-hh---HHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCcccCccchhhCH
Confidence 47889998 899999999753221 11 22233346899999999999999999999999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-c---ccccc----------------CCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----------------EDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----------------~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.++.+++++|++.| + |||. | .||.. .++..+..|...|..+|..+|++++
T Consensus 96 ~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 173 (348)
T 1oc2_A 96 SPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVK 173 (348)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHH
Confidence 356899999999999 8 8874 3 35532 1122233455678899999999886
Q ss_pred H----cCCCEEEEeccccchhhcc------ccc-CCCCCCCcEEEecCCCcccCCCC
Q 026978 124 A----AQIPYTFVSANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKALPPP 169 (230)
Q Consensus 124 ~----~gl~~tilr~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~~~~ 169 (230)
. .|++++++||+.+++.... .++ .... +..+.++|+|+..+..+.
T Consensus 174 ~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ 229 (348)
T 1oc2_A 174 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILA-GIKPKLYGEGKNVRDWIH 229 (348)
T ss_dssp HHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHH-TCCCEEETTSCCEEECEE
T ss_pred HHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHc-CCCceEecCCCceEeeEE
Confidence 5 4899999999988764321 111 1111 255677888877654443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.6e-14 Score=119.97 Aligned_cols=130 Identities=15% Similarity=0.222 Sum_probs=101.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|+.... . ..+ ..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 17 l~~~L~~~g~~V~~~~r~~~~~--~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~ 87 (330)
T 2c20_A 17 AVKKLVDEGLSVVVVDNLQTGH--E------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKP 87 (330)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--G------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSH
T ss_pred HHHHHHhCCCEEEEEeCCCcCc--h------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCH
Confidence 4788999999999999975432 1 123 2379999999999999999999 9999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEE
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTF 131 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ti 131 (230)
+.++.+++++|+++| ++|||. |+ ||.. .++..+..|...|..+|..+|++++. .++++++
T Consensus 88 ~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i 166 (330)
T 2c20_A 88 LQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKI 166 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 457899999999999 999985 32 5532 12333444556788999999998875 4899999
Q ss_pred Eeccccchh
Q 026978 132 VSANLCGAY 140 (230)
Q Consensus 132 lr~g~~~~~ 140 (230)
+||+.+++.
T Consensus 167 lrp~~v~G~ 175 (330)
T 2c20_A 167 FRYFNVAGA 175 (330)
T ss_dssp EECSEEECC
T ss_pred EecCcccCC
Confidence 999887764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=116.74 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=99.6
Q ss_pred CHHHHhhCCC--eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGH--KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~--~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++|+ +|++++|+..... .+...+++++.+|++|.+++.++++++|+|||+++..
T Consensus 34 l~~~L~~~G~~~~V~~~~r~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~ 104 (242)
T 2bka_A 34 LLKEILEQGLFSKVTLIGRRKLTFD---------EEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF 104 (242)
T ss_dssp HHHHHHHHTCCSEEEEEESSCCCCC---------SGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCEEEEEEcCCCCcc---------ccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcccccCCcccc
Confidence 4788999999 9999999865431 1113478999999999999999999999999999874
Q ss_pred ---ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-EEEEeccccchh
Q 026978 70 ---QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP-YTFVSANLCGAY 140 (230)
Q Consensus 70 ---~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~-~tilr~g~~~~~ 140 (230)
++.+..+++++|++.| ++|||. |+.+.... +...|..+|..+|.+++..+++ +++||||++++.
T Consensus 105 ~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~------~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~ 173 (242)
T 2bka_A 105 VRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCD 173 (242)
T ss_dssp HHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECT
T ss_pred eeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC------CcchHHHHHHHHHHHHHhcCCCCeEEEcCceecCC
Confidence 2457889999999999 999885 44433211 2246889999999999999995 999999998764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=119.60 Aligned_cols=164 Identities=10% Similarity=0.090 Sum_probs=114.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC-CCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~-~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~------- 70 (230)
|+++|+++|++|++++|...... . +.+..+.. .+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 17 l~~~L~~~g~~V~~~~r~~~~~~-~---~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~ 92 (347)
T 1orr_A 17 LASFALSQGIDLIVFDNLSRKGA-T---DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDN 92 (347)
T ss_dssp HHHHHHHTTCEEEEEECCCSTTH-H---HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHC
T ss_pred HHHHHHhCCCEEEEEeCCCccCc-h---hhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhC
Confidence 47899999999999998642210 1 11122322 3589999999999999999998 999999998642
Q ss_pred --------hhhHHHHHHHHHHhCCcc-eEec-c---ccccc--------------------CCCCCCCCchhHHHHHHHH
Q 026978 71 --------FLDQLEIVHAIKVAGNIK-RFLP-S---EFGCE--------------------EDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~Vk-r~v~-S---~~g~~--------------------~~~~~~~~p~~~~~~~K~~ 117 (230)
+.++.+++++|++.+ ++ |||. | .||.. .++..+..|...|..+|..
T Consensus 93 ~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~ 171 (347)
T 1orr_A 93 PCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGA 171 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHH
Confidence 457899999999999 86 8885 3 35531 1122233455678899999
Q ss_pred HHHHHHH----cCCCEEEEeccccchhhcc---------ccc-CCCCCCC-----cEEEecCCCcccCCCCC
Q 026978 118 VRRAIEA----AQIPYTFVSANLCGAYFVN---------VLL-RPFESHD-----DVVVYGSGEAKALPPPE 170 (230)
Q Consensus 118 ~e~~l~~----~gl~~tilr~g~~~~~~~~---------~~~-~~~~~~~-----~~~i~g~G~~~~~~~~~ 170 (230)
+|++++. .|+++++|||+.+++.... .++ .... +. .+.++|+|++.+..+..
T Consensus 172 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~i~v 242 (347)
T 1orr_A 172 ADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVE-IKNGINKPFTISGNGKQVRDVLHA 242 (347)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHH-HHTTCCCCEEEESSSCCEEECEEH
T ss_pred HHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHh-CcccCCCCeEEecCCcceEeeEEH
Confidence 9998876 4899999999988864321 111 1111 12 57788999877654443
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=7.6e-15 Score=122.83 Aligned_cols=159 Identities=16% Similarity=0.123 Sum_probs=102.8
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-----CCEEEEcCCCC-----
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-----VDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-----~D~Vi~~~~~~----- 69 (230)
|+++|+++| ++|++++|+.... +.+ .+ .+++ +.+|++|.+.+.+++++ +|+|||+++..
T Consensus 15 l~~~L~~~g~~~V~~~~r~~~~~----~~~---~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 84 (310)
T 1eq2_A 15 IVKALNDKGITDILVVDNLKDGT----KFV---NL--VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEW 84 (310)
T ss_dssp HHHHHHTTTCCCEEEEECCSSGG----GGH---HH--HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCC
T ss_pred HHHHHHHCCCcEEEEEccCCCCc----hhh---hc--Ccce-eccccccHHHHHHHHhccccCCCcEEEECcccccCccc
Confidence 478899999 9999999975421 111 22 1344 78999999999999986 99999999864
Q ss_pred --------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+++++|+++| + |||. | .||... ++..+..|..+|..+|..+|+++++ .|+++
T Consensus 85 ~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~ 162 (310)
T 1eq2_A 85 DGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQI 162 (310)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 2457899999999999 8 8874 3 255322 2222334556788999999999875 48999
Q ss_pred EEEeccccchhhcc------c----cc-CCCCCCCcEEEecCCCc-ccCCCCCCh
Q 026978 130 TFVSANLCGAYFVN------V----LL-RPFESHDDVVVYGSGEA-KALPPPEDI 172 (230)
Q Consensus 130 tilr~g~~~~~~~~------~----~~-~~~~~~~~~~i~g~G~~-~~~~~~~~~ 172 (230)
+++||+.+++.... . ++ .+.. ++.+.++|+|+. .+..++.+.
T Consensus 163 ~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~v~D 216 (310)
T 1eq2_A 163 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYVGD 216 (310)
T ss_dssp EEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------------CBCEEEHHH
T ss_pred EEEeCCcEECcCCCCCCccchHHHHHHHHHHc-CCCcEEecCCCcceEccEEHHH
Confidence 99999988864321 1 11 1111 255667888887 665554433
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.8e-14 Score=118.73 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=110.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|++|++++|+... . .+ +++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 28 l~~~L~~~G~~V~~~~r~~~~-~---------~l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 94 (321)
T 2pk3_A 28 LANHLTEQNVEVFGTSRNNEA-K---------LP---NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNK 94 (321)
T ss_dssp HHHHHHHTTCEEEEEESCTTC-C---------CT---TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCH
T ss_pred HHHHHHHCCCEEEEEecCCcc-c---------cc---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcH
Confidence 478899999999999997542 1 12 789999999999999999987 899999998642
Q ss_pred -------hhhHHHHHHHHHHh-CCcceEec-c---ccccc------CCCCCCCCchhHHHHHHHHHHHHHHH----cCCC
Q 026978 71 -------FLDQLEIVHAIKVA-GNIKRFLP-S---EFGCE------EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIP 128 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~a-g~Vkr~v~-S---~~g~~------~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~ 128 (230)
+.++.+++++|++. + ++|||. | .||.. .++..+..|...|..+|..+|++++. .|++
T Consensus 95 ~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~ 173 (321)
T 2pk3_A 95 KGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMD 173 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCC
Confidence 45689999999886 6 899885 3 25532 12233344556788999999998876 3999
Q ss_pred EEEEeccccchhhcc------cccC-CCC--CC--CcEEEecCCCcccC
Q 026978 129 YTFVSANLCGAYFVN------VLLR-PFE--SH--DDVVVYGSGEAKAL 166 (230)
Q Consensus 129 ~tilr~g~~~~~~~~------~~~~-~~~--~~--~~~~i~g~G~~~~~ 166 (230)
++++||+.+++.... .++. +.. .+ ..+.++|+|+..+.
T Consensus 174 ~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 222 (321)
T 2pk3_A 174 IIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD 222 (321)
T ss_dssp EEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEE
T ss_pred EEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEe
Confidence 999999988764321 1111 000 01 24677888876553
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.9e-14 Score=113.85 Aligned_cols=128 Identities=19% Similarity=0.252 Sum_probs=97.8
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++ |++|++++|+.. +.+ .+ ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 20 l~~~l~~~~~g~~V~~~~r~~~------~~~---~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 89 (253)
T 1xq6_A 20 VYKKLKEGSDKFVAKGLVRSAQ------GKE---KI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDP 89 (253)
T ss_dssp HHHHHHHTTTTCEEEEEESCHH------HHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCT
T ss_pred HHHHHHhcCCCcEEEEEEcCCC------chh---hc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccccccccccc
Confidence 47889999 899999999732 222 23 3578899999999999999999999999999742
Q ss_pred -------------------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCch--hHHHHHHHHHHHHHHHcCC
Q 026978 70 -------------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPF--EAYLEKKRIVRRAIEAAQI 127 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~--~~~~~~K~~~e~~l~~~gl 127 (230)
++.++.+++++|++.+ ++|||. |+.+... +..+..+. ..|..+|..+|.++++.|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~-~~~~~~~~~~~~y~~sK~~~e~~~~~~~i 167 (253)
T 1xq6_A 90 TKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTN-PDHPLNKLGNGNILVWKRKAEQYLADSGT 167 (253)
T ss_dssp TSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTC-TTCGGGGGGGCCHHHHHHHHHHHHHTSSS
T ss_pred cccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCC-CCCccccccchhHHHHHHHHHHHHHhCCC
Confidence 2356899999999999 999985 4433211 11111121 1355789999999999999
Q ss_pred CEEEEeccccchh
Q 026978 128 PYTFVSANLCGAY 140 (230)
Q Consensus 128 ~~tilr~g~~~~~ 140 (230)
+++++|||.+++.
T Consensus 168 ~~~~vrpg~v~~~ 180 (253)
T 1xq6_A 168 PYTIIRAGGLLDK 180 (253)
T ss_dssp CEEEEEECEEECS
T ss_pred ceEEEecceeecC
Confidence 9999999998864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.3e-14 Score=119.26 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=101.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCC-----CCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQ-----NSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~-----~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~--- 70 (230)
|+++|+++||+|++++|.... .. ++..+.+..+...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 18 l~~~L~~~g~~V~~~~r~~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~ 96 (348)
T 1ek6_A 18 TVLELLEAGYLPVVIDNFHNAFRGGGSL-PESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGE 96 (348)
T ss_dssp HHHHHHHTTCCEEEEECSSSSCBCSSSS-BHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHH
T ss_pred HHHHHHHCCCEEEEEecCCccccccccc-HHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccc
Confidence 478899999999999987543 01 222222222223578999999999999999999 8999999998642
Q ss_pred ------------hhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCc-hhHHHHHHHHHHHHHHH---cC
Q 026978 71 ------------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPP-FEAYLEKKRIVRRAIEA---AQ 126 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p-~~~~~~~K~~~e~~l~~---~g 126 (230)
+.++.+++++|++.| ++|||. | .||.. .++..+..| ...|..+|..+|++++. .+
T Consensus 97 ~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~ 175 (348)
T 1ek6_A 97 SVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD 175 (348)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcC
Confidence 457899999999999 999985 3 35532 122233334 55788999999998875 24
Q ss_pred --CCEEEEeccccchh
Q 026978 127 --IPYTFVSANLCGAY 140 (230)
Q Consensus 127 --l~~tilr~g~~~~~ 140 (230)
++++++||+.+++.
T Consensus 176 ~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 176 KTWNAVLLRYFNPTGA 191 (348)
T ss_dssp TTCEEEEEEECEEECC
T ss_pred CCcceEEEeeccccCC
Confidence 99999999877654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=7.6e-14 Score=115.14 Aligned_cols=126 Identities=12% Similarity=0.106 Sum_probs=100.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++|++|++++|+.... ...+++++.+|++|.+++.++++++|+|||+++..
T Consensus 19 la~~L~~~G~~V~~~~r~~~~~------------~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~ 86 (267)
T 3rft_A 19 MRERLAPMAEILRLADLSPLDP------------AGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQG 86 (267)
T ss_dssp HHHHTGGGEEEEEEEESSCCCC------------CCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHH
T ss_pred HHHHHHhcCCEEEEEecCCccc------------cCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHH
Confidence 4788999999999999986432 14679999999999999999999999999999864
Q ss_pred ChhhHHHHHHHHHHhCCcceEec-c---cccccC-----CCCCCCCchhHHHHHHHHHHHHHH----HcCCCEEEEeccc
Q 026978 70 QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE-----DKVRPLPPFEAYLEKKRIVRRAIE----AAQIPYTFVSANL 136 (230)
Q Consensus 70 ~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~-----~~~~~~~p~~~~~~~K~~~e~~l~----~~gl~~tilr~g~ 136 (230)
|+.++.+++++|++.+ ++|||. | .||... ++..+..|...|..+|..+|.+++ +.|+++++||||.
T Consensus 87 N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~ 165 (267)
T 3rft_A 87 NIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGS 165 (267)
T ss_dssp HTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECB
T ss_pred HHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeec
Confidence 3568899999999999 999885 3 254221 122334455678899999998875 4699999999988
Q ss_pred cch
Q 026978 137 CGA 139 (230)
Q Consensus 137 ~~~ 139 (230)
+++
T Consensus 166 v~~ 168 (267)
T 3rft_A 166 CTP 168 (267)
T ss_dssp CSS
T ss_pred ccC
Confidence 765
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.2e-14 Score=119.90 Aligned_cols=137 Identities=15% Similarity=0.207 Sum_probs=101.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+..... ...+.+. ...+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 25 l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 100 (357)
T 1rkx_A 25 LSLWLQTMGATVKGYSLTAPTVP--SLFETAR--VADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP 100 (357)
T ss_dssp HHHHHHHTTCEEEEEESSCSSSS--CHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHhCCCeEEEEeCCCcccc--hhhHhhc--cCCceEEEEccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCH
Confidence 47889999999999999865421 1111010 135799999999999999999997 89999999853
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC-----CCCCCCCchhHHHHHHHHHHHHHHHc---------
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE-----DKVRPLPPFEAYLEKKRIVRRAIEAA--------- 125 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~-----~~~~~~~p~~~~~~~K~~~e~~l~~~--------- 125 (230)
++.++.+++++|++.+.++|||. |+ ||... .+..+..|...|..+|..+|++++..
T Consensus 101 ~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 180 (357)
T 1rkx_A 101 VETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPAN 180 (357)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhc
Confidence 24578999999999854789885 32 55321 22223345567889999999988652
Q ss_pred ----CCCEEEEeccccchhh
Q 026978 126 ----QIPYTFVSANLCGAYF 141 (230)
Q Consensus 126 ----gl~~tilr~g~~~~~~ 141 (230)
|++++++||+.+++..
T Consensus 181 ~~~~gi~~~~lrp~~v~G~~ 200 (357)
T 1rkx_A 181 YGQHGTAVATVRAGNVIGGG 200 (357)
T ss_dssp HHHHCCEEEEEECCCEECTT
T ss_pred cccCCceEEEEeeceeeCCC
Confidence 9999999999988643
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.9e-14 Score=120.09 Aligned_cols=171 Identities=13% Similarity=0.089 Sum_probs=112.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-h---cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l---~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~---- 70 (230)
|+++|+++|++|++++|+..... .++.+.+.. . ...+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 40 l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~ 118 (375)
T 1t2a_A 40 LAEFLLEKGYEVHGIVRRSSSFN-TGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKIS 118 (375)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHH
T ss_pred HHHHHHHCCCEEEEEECCccccc-hhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEECCCccccccc
Confidence 47889999999999999865321 111111100 0 135789999999999999999996 599999998642
Q ss_pred -----------hhhHHHHHHHHHHhCCc---ceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------FLDQLEIVHAIKVAGNI---KRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~V---kr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.++.+++++|++.+ + +|||. | .||.. .++..+..|...|..+|..+|.+++.
T Consensus 119 ~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 197 (375)
T 1t2a_A 119 FDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 197 (375)
T ss_dssp HHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 346789999999999 8 78885 3 35532 12333444556788999999998865
Q ss_pred cCCCEEEEeccccchhhc---------cccc-CCCCCCCcEEEecCCCcccCCCCCChh
Q 026978 125 AQIPYTFVSANLCGAYFV---------NVLL-RPFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~---------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
.+++++++|+...++... ..++ .+........++|+|++.+..++.+.+
T Consensus 198 ~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dv 256 (375)
T 1t2a_A 198 YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 256 (375)
T ss_dssp HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred hCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHH
Confidence 489999999765443211 0011 111101234567998887765555433
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=5.9e-14 Score=117.82 Aligned_cols=130 Identities=15% Similarity=0.233 Sum_probs=99.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|..... . + .+ ..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 l~~~L~~~G~~V~~~~r~~~~~--~---~---~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 86 (311)
T 2p5y_A 16 IVEDLLARGLEVAVLDNLATGK--R---E---NV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDP 86 (311)
T ss_dssp HHHHHHTTTCEEEEECCCSSCC--G---G---GS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHHCCCEEEEEECCCcCc--h---h---hc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCH
Confidence 4788999999999999854321 1 1 22 2578899999999999999998 8999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc----ccc-----cCCCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE----FGC-----EEDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~----~g~-----~~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
+.++.+++++|+++| ++|||. |+ ||. ..++..+..|...|..+|..+|++++. .|+++
T Consensus 87 ~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 165 (311)
T 2p5y_A 87 VLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKW 165 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCE
Confidence 356889999999999 999885 32 443 112223334556788999999998864 58999
Q ss_pred EEEeccccchh
Q 026978 130 TFVSANLCGAY 140 (230)
Q Consensus 130 tilr~g~~~~~ 140 (230)
+++||+.+++.
T Consensus 166 ~~lrp~~v~Gp 176 (311)
T 2p5y_A 166 VSLRYGNVYGP 176 (311)
T ss_dssp EEEEECEEECT
T ss_pred EEEeeccccCc
Confidence 99999987764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.9e-14 Score=118.32 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=96.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.... .+.+.+..+. ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~ 97 (337)
T 2c29_D 21 LVMRLLERGYTVRATVRDPTNV---KKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPEN 97 (337)
T ss_dssp HHHHHHHTTCEEEEEESCTTCH---HHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEECCCCCCSSCSSHHH
T ss_pred HHHHHHHCCCEEEEEECCcchh---HHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEeccccCCCCCChHH
Confidence 4789999999999999975421 1222211221 1258899999999999999999999999999753
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-cc----ccccC-----CCCCCC---------CchhHHHHHHHHHHHHHHH-
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-SE----FGCEE-----DKVRPL---------PPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S~----~g~~~-----~~~~~~---------~p~~~~~~~K~~~e~~l~~- 124 (230)
++.++.+++++|++++.++|||. |+ ||... ++.... .|.++|..+|..+|.++..
T Consensus 98 ~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 98 EVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp HTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHH
Confidence 14568999999999865799885 33 22111 111110 1334678999999987643
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|++++++||+..++.
T Consensus 178 ~~~~gi~~~~lrp~~v~Gp 196 (337)
T 2c29_D 178 AKENNIDFITIIPTLVVGP 196 (337)
T ss_dssp HHHHTCCEEEEEECEEESC
T ss_pred HHHcCCcEEEEeCCceECC
Confidence 6999999999887654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.8e-15 Score=124.05 Aligned_cols=159 Identities=16% Similarity=0.096 Sum_probs=109.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
|+++|+++||+|++++|+.+... .+.+.+.. +...+++++.+|++ ++|+|||+++...
T Consensus 23 l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~~a~~~~~~~~~~~~~ 90 (321)
T 3vps_A 23 LARALVASGEEVTVLDDLRVPPM--IPPEGTGKFLEKPVLELEERDLS----------DVRLVYHLASHKSVPRSFKQPL 90 (321)
T ss_dssp HHHHHHHTTCCEEEECCCSSCCS--SCCTTSSEEECSCGGGCCHHHHT----------TEEEEEECCCCCCHHHHTTSTT
T ss_pred HHHHHHHCCCEEEEEecCCcccc--cchhhhhhhccCCCeeEEeCccc----------cCCEEEECCccCChHHHHhCHH
Confidence 57899999999999999876210 00001111 12346777777765 8999999998652
Q ss_pred -----hhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cCC-CEEEE
Q 026978 71 -----FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQI-PYTFV 132 (230)
Q Consensus 71 -----~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl-~~til 132 (230)
+.++.+++++|+++| ++|||. | .||.. .++..+..|...|..+|..+|++++. .++ +++++
T Consensus 91 ~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~il 169 (321)
T 3vps_A 91 DYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIV 169 (321)
T ss_dssp TTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 457899999999999 999985 3 35532 22334445666888999999998876 689 99999
Q ss_pred eccccchhhcc------ccc-CCCCCCCcEEEecCCCcccCCCCCChh
Q 026978 133 SANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 133 r~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
||+.+++.... .++ .... ++.+.++|+|+..+..++.+.+
T Consensus 170 Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dv 216 (321)
T 3vps_A 170 RFFNVYGPGERPDALVPRLCANLLT-RNELPVEGDGEQRRDFTYITDV 216 (321)
T ss_dssp EECEEECTTCCTTSHHHHHHHHHHH-HSEEEEETTSCCEECEEEHHHH
T ss_pred EeccccCcCCCCCChHHHHHHHHHc-CCCeEEeCCCCceEceEEHHHH
Confidence 99988875422 111 1111 2678889999887766555433
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=115.92 Aligned_cols=127 Identities=13% Similarity=0.063 Sum_probs=93.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC--------Chh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------QFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------~~~ 72 (230)
|+++|+++|++|++++|+.. +.+ .+...+++++.+|++|.++ +++.++|+|||+++.. ++.
T Consensus 16 l~~~L~~~g~~V~~~~R~~~------~~~---~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~ 84 (224)
T 3h2s_A 16 IVAEARRRGHEVLAVVRDPQ------KAA---DRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGRGYLHLD 84 (224)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHH---HHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSCTHHHHH
T ss_pred HHHHHHHCCCEEEEEEeccc------ccc---cccCCCceEEecccccccH--hhcccCCEEEECCccCCCcchhhHHHH
Confidence 47899999999999999742 222 3335789999999999887 8899999999999874 467
Q ss_pred hHHHHHHHHHHhCCcceEec-ccccc---cCC-------CCCCCCchhHHHHHHHHHHHH--H-HHcCCCEEEEeccccc
Q 026978 73 DQLEIVHAIKVAGNIKRFLP-SEFGC---EED-------KVRPLPPFEAYLEKKRIVRRA--I-EAAQIPYTFVSANLCG 138 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vkr~v~-S~~g~---~~~-------~~~~~~p~~~~~~~K~~~e~~--l-~~~gl~~tilr~g~~~ 138 (230)
++++++++|+++| +|||. |+.+. ... +.....|...|..+|...|.+ + ++.+++|++|||++++
T Consensus 85 ~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~ 162 (224)
T 3h2s_A 85 FATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAF 162 (224)
T ss_dssp HHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBC
T ss_pred HHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEcCcccc
Confidence 8999999999998 66663 43321 111 111111244577899888854 2 2479999999999998
Q ss_pred hh
Q 026978 139 AY 140 (230)
Q Consensus 139 ~~ 140 (230)
+.
T Consensus 163 g~ 164 (224)
T 3h2s_A 163 PS 164 (224)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.4e-13 Score=115.25 Aligned_cols=160 Identities=13% Similarity=0.194 Sum_probs=113.4
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~------ 70 (230)
|+++|+++ |++|++++|+..... . +.+..+. ..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 16 l~~~L~~~~g~~V~~~~r~~~~~~-~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~ 91 (361)
T 1kew_A 16 VVRHIIKNTQDTVVNIDKLTYAGN-L---ESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSIT 91 (361)
T ss_dssp HHHHHHHHCSCEEEEEECCCTTCC-G---GGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHH
T ss_pred HHHHHHhcCCCeEEEEecCCCCCc-h---hhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhh
Confidence 47888987 799999999753211 1 1122221 3479999999999999999998 9999999998642
Q ss_pred ---------hhhHHHHHHHHHHh--CCcc-------eEec-c---ccccc--------------CCCCCCCCchhHHHHH
Q 026978 71 ---------FLDQLEIVHAIKVA--GNIK-------RFLP-S---EFGCE--------------EDKVRPLPPFEAYLEK 114 (230)
Q Consensus 71 ---------~~~~~~ll~Aa~~a--g~Vk-------r~v~-S---~~g~~--------------~~~~~~~~p~~~~~~~ 114 (230)
+.++.+++++|++. + ++ |||. | .||.. .++..+..|...|..+
T Consensus 92 ~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~s 170 (361)
T 1kew_A 92 GPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS 170 (361)
T ss_dssp CTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHH
Confidence 45789999999998 8 88 9885 3 35532 1222334455678899
Q ss_pred HHHHHHHHHH----cCCCEEEEeccccchhhcc------ccc-CCCCCCCcEEEecCCCcccC
Q 026978 115 KRIVRRAIEA----AQIPYTFVSANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKAL 166 (230)
Q Consensus 115 K~~~e~~l~~----~gl~~tilr~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~~ 166 (230)
|..+|.+++. .|++++++||+.+++.... .++ .... ++.+.++|+|+....
T Consensus 171 K~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (361)
T 1kew_A 171 KASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYGKGDQIRD 232 (361)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHH-TCCEEEETTSCCEEE
T ss_pred HHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHc-CCCceEcCCCceeEe
Confidence 9999998875 4999999999988764321 111 1111 256778888876553
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-13 Score=114.50 Aligned_cols=130 Identities=18% Similarity=0.299 Sum_probs=99.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.... . +.+..+ .+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 36 l~~~L~~~g~~V~~~~r~~~~~--~---~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~ 108 (330)
T 2pzm_A 36 LIEHWLPQGHEILVIDNFATGK--R---EVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED 108 (330)
T ss_dssp HHHHHGGGTCEEEEEECCSSSC--G---GGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH
T ss_pred HHHHHHHCCCEEEEEECCCccc--h---hhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCccccChh
Confidence 4788999999999999975432 1 011122 579999999999999999999 999999999864
Q ss_pred ---ChhhHHHHHHHHHHhCCcceEec-cc---ccccC------CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 70 ---QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE------DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 70 ---~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~------~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
++.++.+++++|+++| ++|||. |+ ||... ++.. .|...|..+|..+|++++..++++++|||+.
T Consensus 109 ~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~ 185 (330)
T 2pzm_A 109 AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMSDVPVVSLRLAN 185 (330)
T ss_dssp HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTCSSCEEEEEECE
T ss_pred HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHcCCCEEEEeeee
Confidence 2457899999999999 999885 32 44321 1111 2445788999999999998899999999876
Q ss_pred cchh
Q 026978 137 CGAY 140 (230)
Q Consensus 137 ~~~~ 140 (230)
.++.
T Consensus 186 v~gp 189 (330)
T 2pzm_A 186 VTGP 189 (330)
T ss_dssp EECT
T ss_pred eECc
Confidence 6653
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.4e-13 Score=114.20 Aligned_cols=159 Identities=13% Similarity=0.192 Sum_probs=110.5
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~------- 70 (230)
|+++|+++| ++|++++|...... .+ .+..+. ..+++++.+|++|.+++.+++.++|+|||+++...
T Consensus 19 l~~~L~~~g~~~~V~~~~r~~~~~~-~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~ 94 (336)
T 2hun_A 19 FIRYILEKHPDWEVINIDKLGYGSN-PA---NLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISS 94 (336)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCC-GG---GGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEEecCcccCc-hh---HHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhC
Confidence 478899986 99999999753221 11 122221 35799999999999999999999999999998642
Q ss_pred --------hhhHHHHHHHHHHhCCc-ceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 71 --------FLDQLEIVHAIKVAGNI-KRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~V-kr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
+.++.+++++|++.+ + +|||. | .||.. .++..+..|...|..+|..+|++++. .++++
T Consensus 95 ~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 173 (336)
T 2hun_A 95 PEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNA 173 (336)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCE
Confidence 457899999999987 5 78885 3 35542 12223344556788999999998875 68999
Q ss_pred EEEeccccchhhcc------ccc-CCCCCCCcEEEecCCCccc
Q 026978 130 TFVSANLCGAYFVN------VLL-RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 130 tilr~g~~~~~~~~------~~~-~~~~~~~~~~i~g~G~~~~ 165 (230)
+++||+.+++.... .++ .... ++.+.++|+|++..
T Consensus 174 ~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 215 (336)
T 2hun_A 174 SITRCTNNYGPYQFPEKLIPKTIIRASL-GLKIPIYGTGKNVR 215 (336)
T ss_dssp EEEEECEEESTTCCTTSHHHHHHHHHHT-TCCEEEETC---CE
T ss_pred EEEeeeeeeCcCCCcCchHHHHHHHHHc-CCCceEeCCCCcee
Confidence 99999988764321 111 1111 25677888887655
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=114.37 Aligned_cols=164 Identities=12% Similarity=0.206 Sum_probs=111.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|. .+|++|.+++.++++ ++|+|||+++...
T Consensus 21 l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 76 (287)
T 3sc6_A 21 LQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKER 76 (287)
T ss_dssp HHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCH
T ss_pred HHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCH
Confidence 467889999999999983 158899999999999 7999999998753
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSAN 135 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g 135 (230)
+.++.+++++|+++| + |||. | .||.. .++..+..|...|..+|..+|++++..+.+++++||+
T Consensus 77 ~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~ 154 (287)
T 3sc6_A 77 DLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTS 154 (287)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEeee
Confidence 356899999999999 7 5774 3 35532 1233444566788999999999999988899999999
Q ss_pred ccchhhcccc----cC-CCCCCCcEEEecCCCcccCCCCC-ChhhhhhhheeecCCcccccCCCC
Q 026978 136 LCGAYFVNVL----LR-PFESHDDVVVYGSGEAKALPPPE-DIPISIMHSLLAKGDSMNFELGED 194 (230)
Q Consensus 136 ~~~~~~~~~~----~~-~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 194 (230)
.+++.....+ +. ... +..+.++|+ +.+..++. |+...+...+ ..+....++++++
T Consensus 155 ~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~i~v~Dva~~~~~~~-~~~~~~~~~i~~~ 215 (287)
T 3sc6_A 155 WLYGKYGNNFVKTMIRLGKE-REEISVVAD--QIGSPTYVADLNVMINKLI-HTSLYGTYHVSNT 215 (287)
T ss_dssp SEECSSSCCHHHHHHHHHTT-CSEEEEECS--CEECCEEHHHHHHHHHHHH-TSCCCEEEECCCB
T ss_pred eecCCCCCcHHHHHHHHHHc-CCCeEeecC--cccCceEHHHHHHHHHHHH-hCCCCCeEEEcCC
Confidence 9877432211 11 111 266777765 44444444 3333333222 2222234666543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=117.12 Aligned_cols=126 Identities=17% Similarity=0.255 Sum_probs=99.0
Q ss_pred CHHHHhhC-CC-eEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-------
Q 026978 1 MVKASVSS-GH-KTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~-g~-~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~------- 70 (230)
|+++|+++ |+ +|++++|+.. +.+.+ +.+...+++++.+|++|.+++.++++++|+|||+++...
T Consensus 37 l~~~L~~~~g~~~V~~~~r~~~------~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~ 110 (344)
T 2gn4_A 37 FVRKVLDTTNAKKIIVYSRDEL------KQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYN 110 (344)
T ss_dssp HHHHHHHHCCCSEEEEEESCHH------HHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHS
T ss_pred HHHHHHhhCCCCEEEEEECChh------hHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcC
Confidence 47889999 97 9999999742 22211 123346899999999999999999999999999998652
Q ss_pred --------hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCCEEEEec
Q 026978 71 --------FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIPYTFVSA 134 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~ 134 (230)
+.++.+++++|+++| ++|||. |+-... .|...|..+|..+|.+++. .|++++++||
T Consensus 111 ~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRp 182 (344)
T 2gn4_A 111 PLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-------NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRY 182 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-------SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-------CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 456799999999999 999985 432211 2445788999999999875 4699999999
Q ss_pred cccchh
Q 026978 135 NLCGAY 140 (230)
Q Consensus 135 g~~~~~ 140 (230)
|.+++.
T Consensus 183 g~v~g~ 188 (344)
T 2gn4_A 183 GNVVGS 188 (344)
T ss_dssp CEETTC
T ss_pred ccEECC
Confidence 988863
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-13 Score=116.99 Aligned_cols=168 Identities=14% Similarity=0.109 Sum_probs=108.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc------CCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ------GIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~------~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~--- 69 (230)
|+++|+++|++|++++|+..... .++ +..+. ..+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 17 l~~~L~~~g~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~ 92 (372)
T 1db3_A 17 LAEFLLEKGYEVHGIKRRASSFN-TER---VDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVA 92 (372)
T ss_dssp HHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTT
T ss_pred HHHHHHHCCCEEEEEECCCcccc-hHH---HHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCcc
Confidence 47889999999999999764310 011 11221 24789999999999999999986 69999999853
Q ss_pred ------------ChhhHHHHHHHHHHhCCc---ceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------QFLDQLEIVHAIKVAGNI---KRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~ag~V---kr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.++.+++++|++.+ + +|||. | .||.. .++..+..|...|..+|..+|.+++.
T Consensus 93 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~ 171 (372)
T 1db3_A 93 VSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR 171 (372)
T ss_dssp TTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHH
Confidence 1347899999999999 8 78885 3 35532 12333444566788999999998865
Q ss_pred --cCCCEEEEeccccchhhc---------cccc-CCCCCCCcEEEecCCCcccCCCCCChh
Q 026978 125 --AQIPYTFVSANLCGAYFV---------NVLL-RPFESHDDVVVYGSGEAKALPPPEDIP 173 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~~~---------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~~~~ 173 (230)
.+++++++|+...++... ..++ .+........++|+|++.+..++.+.+
T Consensus 172 ~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dv 232 (372)
T 1db3_A 172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232 (372)
T ss_dssp HHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHH
T ss_pred HHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHH
Confidence 589999999754443211 1111 111100235567999887766555433
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.7e-13 Score=117.49 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=100.5
Q ss_pred CHHHHh-hCCCeEEEEEcCCCCCC---CcchHhhh----hhhc----CCC---eEEEEecCCCHHHHHHHhc--C-CCEE
Q 026978 1 MVKASV-SSGHKTFVYARPVTQNS---RPSKLEIH----KEFQ----GIG---VTIIEGELDEHKKIVSILK--E-VDVV 62 (230)
Q Consensus 1 lv~~Ll-~~g~~V~~l~R~~~~~~---~p~k~~~l----~~l~----~~g---v~vv~gD~~d~~~L~~al~--g-~D~V 62 (230)
|+++|+ ++|++|++++|+..... .....+.+ +.+. ..+ ++++.+|++|.+++.++++ + +|+|
T Consensus 18 l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~v 97 (397)
T 1gy8_A 18 FVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAV 97 (397)
T ss_dssp HHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHHHHhcCCCCEE
Confidence 478899 99999999999754310 00001111 1111 125 8999999999999999998 7 9999
Q ss_pred EEcCCCCC---------------hhhHHHHHHHHHHhCCcceEec-c---cccccC-----------CCCCCCCchhHHH
Q 026978 63 ISTVAYPQ---------------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE-----------DKVRPLPPFEAYL 112 (230)
Q Consensus 63 i~~~~~~~---------------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~-----------~~~~~~~p~~~~~ 112 (230)
||+++... +.++.+|+++|+++| ++|||. | .||... ++..+..|...|.
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~ 176 (397)
T 1gy8_A 98 VHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYG 176 (397)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHH
T ss_pred EECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchH
Confidence 99998652 457899999999999 999985 3 254322 1223334556788
Q ss_pred HHHHHHHHHHHH----cCCCEEEEeccccchh
Q 026978 113 EKKRIVRRAIEA----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 113 ~~K~~~e~~l~~----~gl~~tilr~g~~~~~ 140 (230)
.+|..+|.+++. .+++++++||+.+++.
T Consensus 177 ~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~ 208 (397)
T 1gy8_A 177 ESKLIAERMIRDCAEAYGIKGICLRYFNACGA 208 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECC
T ss_pred HHHHHHHHHHHHHHHHHCCcEEEEeccceeCC
Confidence 999999998875 4999999999888754
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=113.73 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=97.1
Q ss_pred CHHHHhhCCC--eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGH--KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~--~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|+ +|++++|+... ...+++++.+|++|.+++.+++ +|+|||+++...
T Consensus 21 l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~ 85 (215)
T 2a35_A 21 LLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIKEAGSEEA 85 (215)
T ss_dssp HHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHHHHSSHHH
T ss_pred HHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccccCCCHHH
Confidence 4788999998 99999997542 1357889999999999998888 999999998642
Q ss_pred -----hhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-EEEEeccccchhh
Q 026978 71 -----FLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP-YTFVSANLCGAYF 141 (230)
Q Consensus 71 -----~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~-~tilr~g~~~~~~ 141 (230)
+.+..+++++|++.| ++|||. |+.+.... |...|..+|..+|+++++.+++ ++++||+.+++..
T Consensus 86 ~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~------~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~ 156 (215)
T 2a35_A 86 FRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK------SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR 156 (215)
T ss_dssp HHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred HHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC------CccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCC
Confidence 457899999999999 999885 44433211 2347889999999999999999 9999999998753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=116.54 Aligned_cols=158 Identities=18% Similarity=0.227 Sum_probs=107.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
|+++|+++|++|++++|+.... ... +..+ ...+++++.+|+.|. ++.++|+|||+++...
T Consensus 43 l~~~L~~~g~~V~~~~r~~~~~--~~~---~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~A~~~~~~~~~~~~~ 112 (343)
T 2b69_A 43 LTDKLMMDGHEVTVVDNFFTGR--KRN---VEHWIGHENFELINHDVVEP-----LYIEVDQIYHLASPASPPNYMYNPI 112 (343)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--GGG---TGGGTTCTTEEEEECCTTSC-----CCCCCSEEEECCSCCSHHHHTTCHH
T ss_pred HHHHHHHCCCEEEEEeCCCccc--hhh---hhhhccCCceEEEeCccCCh-----hhcCCCEEEECccccCchhhhhCHH
Confidence 4788999999999999975432 111 1122 235799999999875 4689999999998642
Q ss_pred ------hhhHHHHHHHHHHhCCcceEec-c---cccccC----CCC-----CCCCchhHHHHHHHHHHHHHHH----cCC
Q 026978 71 ------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKV-----RPLPPFEAYLEKKRIVRRAIEA----AQI 127 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~-----~~~~p~~~~~~~K~~~e~~l~~----~gl 127 (230)
+.++.+++++|++.| + |||. | .||... ++. .+..|...|..+|..+|++++. .++
T Consensus 113 ~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 190 (343)
T 2b69_A 113 KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 190 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 456899999999999 7 7764 3 255321 111 2334555688999999998754 599
Q ss_pred CEEEEeccccchhhcc--------ccc-CCCCCCCcEEEecCCCcccCCCCCC
Q 026978 128 PYTFVSANLCGAYFVN--------VLL-RPFESHDDVVVYGSGEAKALPPPED 171 (230)
Q Consensus 128 ~~tilr~g~~~~~~~~--------~~~-~~~~~~~~~~i~g~G~~~~~~~~~~ 171 (230)
+++++||+.+++.... .++ .... ++.+.++|+|+..+..+..+
T Consensus 191 ~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~ 242 (343)
T 2b69_A 191 EVRVARIFNTFGPRMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVS 242 (343)
T ss_dssp CEEEEEECCEECTTCCTTCCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEHH
T ss_pred cEEEEEEcceeCcCCCCCcccHHHHHHHHHHc-CCCceEcCCCCeEEeeEeHH
Confidence 9999999888764321 111 1111 25677899998776555443
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=114.70 Aligned_cols=152 Identities=11% Similarity=0.047 Sum_probs=109.2
Q ss_pred CHHHHhhC--CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC-------
Q 026978 1 MVKASVSS--GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~--g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~------- 69 (230)
|+++|+++ |++|++++|+... ..+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 15 l~~~L~~~~~g~~V~~~~r~~~~--------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~ 80 (317)
T 3ajr_A 15 LVPYLAEKYGKKNVIASDIVQRD--------------TGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKD 80 (317)
T ss_dssp HHHHHHHHHCGGGEEEEESSCCC--------------CTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEecCCCcc--------------ccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccC
Confidence 47889988 8999999997431 1267899999999999999998 999999999864
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---cccccC-----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE-----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~-----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+++++|+++| ++|||. | .||... .+..+..|...|..+|..+|.+++. .|+++
T Consensus 81 ~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 159 (317)
T 3ajr_A 81 PALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDV 159 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred hHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhcCCeE
Confidence 2457899999999999 999985 3 255321 1223334566788999999988764 59999
Q ss_pred EEEeccccchhhc-c----------ccc-CCCCCCCcEEEecCCCcccCCCC
Q 026978 130 TFVSANLCGAYFV-N----------VLL-RPFESHDDVVVYGSGEAKALPPP 169 (230)
Q Consensus 130 tilr~g~~~~~~~-~----------~~~-~~~~~~~~~~i~g~G~~~~~~~~ 169 (230)
+++|++.+++... + .+. .+.. +.+.++++|+..+..+.
T Consensus 160 ~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~ 209 (317)
T 3ajr_A 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKR--EKYKCYLAPNRALPMMY 209 (317)
T ss_dssp EEEEECEEECSSSCCCSCSSTHHHHHHHHHHTT--CCEEECSCTTCCEEEEE
T ss_pred EEEecCcEeccCCCCCCcchhHHHHHHHHHHhC--CCceeecCccceeeeeE
Confidence 9999766665321 1 011 1223 55677787777654333
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-13 Score=113.09 Aligned_cols=132 Identities=19% Similarity=0.146 Sum_probs=97.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~------- 70 (230)
|+++|+++||+|++++|+..... . +.+..+ ...+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 19 l~~~L~~~G~~V~~~~r~~~~~~-~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~ 94 (345)
T 2z1m_A 19 LAKLLLEKGYEVYGADRRSGEFA-S---WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQ 94 (345)
T ss_dssp HHHHHHHTTCEEEEECSCCSTTT-T---HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTS
T ss_pred HHHHHHHCCCEEEEEECCCcccc-c---ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhC
Confidence 47889999999999999865321 1 112222 124799999999999999999996 599999998642
Q ss_pred --------hhhHHHHHHHHHHhCCc-ceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 71 --------FLDQLEIVHAIKVAGNI-KRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~V-kr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
+.++.+++++|++.| + +|||. | .||... ++..+..|...|..+|..+|.+++. .++++
T Consensus 95 ~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 173 (345)
T 2z1m_A 95 PILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFA 173 (345)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCce
Confidence 356899999999998 8 89885 3 255422 2223344556788999999998865 48999
Q ss_pred EEEecccc
Q 026978 130 TFVSANLC 137 (230)
Q Consensus 130 tilr~g~~ 137 (230)
+++|+...
T Consensus 174 ~~~r~~~~ 181 (345)
T 2z1m_A 174 CSGILFNH 181 (345)
T ss_dssp EEEEECCE
T ss_pred Eeeeeeee
Confidence 98885443
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=125.50 Aligned_cols=136 Identities=14% Similarity=0.186 Sum_probs=102.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|++|++++|...... +..+.+..+...+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 27 l~~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~ 104 (699)
T 1z45_A 27 TVVELIENGYDCVVADNLSNSTY--DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIP 104 (699)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCT--HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSH
T ss_pred HHHHHHHCcCEEEEEECCCcchH--HHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCH
Confidence 47899999999999999764321 11122222334679999999999999999999 8999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-c---ccccc--------CCCCCCCCchhHHHHHHHHHHHHHHH------c
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE--------EDKVRPLPPFEAYLEKKRIVRRAIEA------A 125 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~--------~~~~~~~~p~~~~~~~K~~~e~~l~~------~ 125 (230)
+.++.+++++|+++| ++|||. | .||.. ..+..+..|...|..+|..+|++++. .
T Consensus 105 ~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ 183 (699)
T 1z45_A 105 LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 183 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccC
Confidence 457889999999999 999885 3 25431 12223334556788999999998875 5
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
+++++++||+.+++
T Consensus 184 g~~~~ilR~~~vyG 197 (699)
T 1z45_A 184 SWKFAILRYFNPIG 197 (699)
T ss_dssp SCEEEEEEECEEEC
T ss_pred CCcEEEEEeccccC
Confidence 89999999877665
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=8.1e-14 Score=119.27 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=109.8
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-----CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-----EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-----g~D~Vi~~~~~~----- 69 (230)
|+++|+++| ++|++++|+.... +. ..+ .+++ +.+|++|.+++.++++ ++|+|||+++..
T Consensus 62 l~~~L~~~g~~~V~~~~r~~~~~----~~---~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~ 131 (357)
T 2x6t_A 62 IVKALNDKGITDILVVDNLKDGT----KF---VNL--VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEW 131 (357)
T ss_dssp HHHHHHHTTCCCEEEEECCSSGG----GG---GGT--TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCC
T ss_pred HHHHHHHCCCcEEEEEecCCCcc----hh---hcc--cCce-EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCCccC
Confidence 478999999 9999999975421 11 122 2344 7899999999999998 599999999854
Q ss_pred --------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+++++|+++| + |||. | .||... ++..+..|...|..+|..+|++++. .|+++
T Consensus 132 ~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~ 209 (357)
T 2x6t_A 132 DGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQI 209 (357)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCE
Confidence 3467899999999999 8 8874 3 255321 2222334556788999999999875 48999
Q ss_pred EEEeccccchhhcc------c----cc-CCCCCCCcEEEecCCCc-ccCCCCC
Q 026978 130 TFVSANLCGAYFVN------V----LL-RPFESHDDVVVYGSGEA-KALPPPE 170 (230)
Q Consensus 130 tilr~g~~~~~~~~------~----~~-~~~~~~~~~~i~g~G~~-~~~~~~~ 170 (230)
++|||+.+++.... . ++ .+.. +..+.++|+|+. .+..+..
T Consensus 210 ~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v 261 (357)
T 2x6t_A 210 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYV 261 (357)
T ss_dssp EEEEECEEESSSCTTCGGGSCHHHHHHHHHHT-TCCCEEETTGGGCEECEEEH
T ss_pred EEEecCeEECCCCCCCcccchHHHHHHHHHHc-CCCcEEeCCCCcceEccEEH
Confidence 99999988864321 1 11 1111 256678888877 5544443
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.2e-13 Score=112.44 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=98.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|++|++++|+..... +.+..+ .+++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 37 l~~~L~~~g~~V~~~~r~~~~~~-----~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~ 109 (333)
T 2q1w_A 37 IAELLLERGDKVVGIDNFATGRR-----EHLKDH--PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYND 109 (333)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCG-----GGSCCC--TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH
T ss_pred HHHHHHHCCCEEEEEECCCccch-----hhHhhc--CCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCCccCChH
Confidence 47889999999999999754321 111111 5799999999999999999998 999999998642
Q ss_pred ----hhhHHHHHHHHHHhCCcceEec-c---ccc----ccC---CCCCCCCch-hHHHHHHHHHHHHHHH-cCCCEEEEe
Q 026978 71 ----FLDQLEIVHAIKVAGNIKRFLP-S---EFG----CEE---DKVRPLPPF-EAYLEKKRIVRRAIEA-AQIPYTFVS 133 (230)
Q Consensus 71 ----~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g----~~~---~~~~~~~p~-~~~~~~K~~~e~~l~~-~gl~~tilr 133 (230)
+.++.+++++|+++| ++|||. | .|| ... ++.. .|. ..|..+|..+|++++. .. +++++|
T Consensus 110 ~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR 185 (333)
T 2q1w_A 110 TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR--NPANSSYAISKSANEDYLEYSGL-DFVTFR 185 (333)
T ss_dssp HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC--CCTTCHHHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC--CCCCCchHHHHHHHHHHHHhhhC-CeEEEe
Confidence 457899999999999 999985 3 355 211 1111 354 5788999999999988 66 999999
Q ss_pred ccccchh
Q 026978 134 ANLCGAY 140 (230)
Q Consensus 134 ~g~~~~~ 140 (230)
|+..++.
T Consensus 186 ~~~v~gp 192 (333)
T 2q1w_A 186 LANVVGP 192 (333)
T ss_dssp ESEEEST
T ss_pred eceEECc
Confidence 9877654
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.47 E-value=9e-14 Score=117.94 Aligned_cols=137 Identities=18% Similarity=0.134 Sum_probs=95.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---------- 69 (230)
|+++|+++||+|++++|+..... +...+..+. ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 25 l~~~Ll~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~ 101 (338)
T 2rh8_A 25 LVKLLLQKGYAVNTTVRDPDNQK---KVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPEND 101 (338)
T ss_dssp HHHHHHHTTCEEEEEESCTTCTT---TTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEESSCCCC--------
T ss_pred HHHHHHHCCCEEEEEEcCcchhh---hHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHH
Confidence 57899999999999999764321 111111221 2478999999999999999999999999998742
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEec-ccc----cc-------cCCCCCC--------CCc-hhHHHHHHHHHHHHHHH
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLP-SEF----GC-------EEDKVRP--------LPP-FEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~-S~~----g~-------~~~~~~~--------~~p-~~~~~~~K~~~e~~l~~ 124 (230)
++.++.++++||++++.++|||. |+. +. ..++... ..| ...|..+|..+|++++.
T Consensus 102 ~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 181 (338)
T 2rh8_A 102 MIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWK 181 (338)
T ss_dssp -CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHH
Confidence 14578999999999833899985 332 11 1112111 011 11366889888887643
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+++++|||+..++.
T Consensus 182 ~~~~~gi~~~~lrp~~v~Gp 201 (338)
T 2rh8_A 182 FAEENNIDLITVIPTLMAGS 201 (338)
T ss_dssp HHHHHTCCEEEEEECEEESC
T ss_pred HHHHcCCcEEEEeCCceECC
Confidence 5999999999888764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=8.4e-13 Score=111.93 Aligned_cols=135 Identities=18% Similarity=0.268 Sum_probs=97.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|..... ++..+.+..+...+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 16 l~~~L~~~G~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~ 93 (338)
T 1udb_A 16 TCVQLLQNGHDVIILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKP 93 (338)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHHCCCEEEEEecCCCcc--hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcH
Confidence 4789999999999998864332 112222222223468899999999999999997 599999999864
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCCCCCCc-hhHHHHHHHHHHHHHHH----c-CCCE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKVRPLPP-FEAYLEKKRIVRRAIEA----A-QIPY 129 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~~~~~p-~~~~~~~K~~~e~~l~~----~-gl~~ 129 (230)
++.++.+++++|+++| ++|||. | .||... ++..+..| ...|..+|..+|++++. . ++++
T Consensus 94 ~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 172 (338)
T 1udb_A 94 LEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCce
Confidence 2457889999999999 999985 3 255321 12222223 45788999999998865 3 7999
Q ss_pred EEEeccccc
Q 026978 130 TFVSANLCG 138 (230)
Q Consensus 130 tilr~g~~~ 138 (230)
+++|++..+
T Consensus 173 ~ilR~~~v~ 181 (338)
T 1udb_A 173 ALLRYFNPV 181 (338)
T ss_dssp EEEEECEEE
T ss_pred EEEeeceec
Confidence 999985544
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.7e-14 Score=115.94 Aligned_cols=134 Identities=16% Similarity=0.148 Sum_probs=96.4
Q ss_pred CCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC----------------ChhhHHHHHHHHHHhCCcceEec-cc---
Q 026978 37 IGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP----------------QFLDQLEIVHAIKVAGNIKRFLP-SE--- 94 (230)
Q Consensus 37 ~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~----------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~--- 94 (230)
.+++++.+|++|.+++.+++++ +|+|||+++.. ++.++.+|+++|+++| ++|||+ |+
T Consensus 38 ~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~v 116 (319)
T 4b8w_A 38 VFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCI 116 (319)
T ss_dssp EECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGG
T ss_pred cccCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhh
Confidence 3566778999999999999997 99999999864 2457899999999999 999985 43
Q ss_pred ccccC----CCCC----CCCchh-HHHHHHHHHHHHHHH----cCCCEEEEeccccchhhcc----------ccc-C---
Q 026978 95 FGCEE----DKVR----PLPPFE-AYLEKKRIVRRAIEA----AQIPYTFVSANLCGAYFVN----------VLL-R--- 147 (230)
Q Consensus 95 ~g~~~----~~~~----~~~p~~-~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~~~~----------~~~-~--- 147 (230)
||... ++.. +..|.. +|..+|..+|++++. .+++++++||+.+++.... .++ .
T Consensus 117 yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~ 196 (319)
T 4b8w_A 117 FPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHL 196 (319)
T ss_dssp SCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHH
T ss_pred cCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHH
Confidence 55321 1111 233433 578999999998865 7999999999988865421 111 1
Q ss_pred -CCCCCCcEEEecCCCcccCCCCCCh
Q 026978 148 -PFESHDDVVVYGSGEAKALPPPEDI 172 (230)
Q Consensus 148 -~~~~~~~~~i~g~G~~~~~~~~~~~ 172 (230)
... +..+.++|+|++.+..++.+.
T Consensus 197 ~~~~-~~~~~~~~~g~~~~~~i~v~D 221 (319)
T 4b8w_A 197 AKSS-GSALTVWGTGNPRRQFIYSLD 221 (319)
T ss_dssp HHHH-TCCEEEESCSCCEECEEEHHH
T ss_pred Hhcc-CCceEEeCCCCeeEEEEeHHH
Confidence 112 367889999988776555433
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-12 Score=111.37 Aligned_cols=159 Identities=18% Similarity=0.187 Sum_probs=110.0
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC-HHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE-HKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d-~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++ ||+|++++|+.... +.+ +...+++++.+|++| .+.+.++++++|+|||+++...
T Consensus 16 l~~~L~~~~g~~V~~~~r~~~~~------~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 87 (345)
T 2bll_A 16 LTERLLREDHYEVYGLDIGSDAI------SRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP 87 (345)
T ss_dssp HHHHHHHSTTCEEEEEESCCGGG------GGG--TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSH
T ss_pred HHHHHHHhCCCEEEEEeCCcchH------HHh--hcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCccchhcCH
Confidence 47889998 89999999975321 111 124589999999998 4678899999999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCC------C-CchhHHHHHHHHHHHHHHH----
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRP------L-PPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~------~-~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.++.+++++|+++| +|||. |+ ||... ++..+ . .|...|..+|..+|++++.
T Consensus 88 ~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 165 (345)
T 2bll_A 88 LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 165 (345)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHh
Confidence 346789999999988 78874 33 55321 11111 1 2444788999999998854
Q ss_pred cCCCEEEEeccccchhhcc--------------ccc-CCCCCCCcEEEecCCCcccCCCCC
Q 026978 125 AQIPYTFVSANLCGAYFVN--------------VLL-RPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~~--------------~~~-~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
.|++++++||+.+++.... .++ .... +..+.++|+|++.+..+..
T Consensus 166 ~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v 225 (345)
T 2bll_A 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDI 225 (345)
T ss_dssp HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEEH
T ss_pred cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHc-CCCcEEECCCCEEEEEEEH
Confidence 5999999999988764321 111 1111 2567788888876644443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.3e-13 Score=114.46 Aligned_cols=136 Identities=14% Similarity=0.137 Sum_probs=93.9
Q ss_pred CHHHHhhCCCeEEEEEc-CCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYAR-PVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R-~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~-------- 69 (230)
|+++|+++||+|++++| +..... +.+.+..+. ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 17 l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~ 93 (322)
T 2p4h_X 17 IIKSLLENGYSVNTTIRADPERKR---DVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPE 93 (322)
T ss_dssp HHHHHHHTTCEEEEECCCC----C---CCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEECCCCC--------
T ss_pred HHHHHHHCCCEEEEEEeCCccchh---HHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChH
Confidence 47899999999999999 542210 111111221 1257899999999999999999999999999642
Q ss_pred ------ChhhHHHHHHHHHHh-CCcceEec-ccc----cccC-----CCCCCC--------Cch-hHHHHHHHHHHHHHH
Q 026978 70 ------QFLDQLEIVHAIKVA-GNIKRFLP-SEF----GCEE-----DKVRPL--------PPF-EAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~a-g~Vkr~v~-S~~----g~~~-----~~~~~~--------~p~-~~~~~~K~~~e~~l~ 123 (230)
++.++.+++++|+++ | ++|||. |+. +... ++.... .|. ..|..+|..+|++++
T Consensus 94 ~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~ 172 (322)
T 2p4h_X 94 EIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVL 172 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHH
Confidence 145789999999998 8 999985 322 2111 111110 111 257799999988765
Q ss_pred H----cCCCEEEEeccccchh
Q 026978 124 A----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ~----~gl~~tilr~g~~~~~ 140 (230)
+ .|++++++||+..++.
T Consensus 173 ~~~~~~gi~~~~lrp~~v~g~ 193 (322)
T 2p4h_X 173 EFGEQNGIDVVTLILPFIVGR 193 (322)
T ss_dssp HHHHHTTCCEEEEEECEEESC
T ss_pred HHHHhcCCcEEEEcCCceECC
Confidence 3 6899999999988764
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=7.9e-13 Score=114.66 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=98.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC--------C------cchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS--------R------PSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~--------~------p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~ 64 (230)
|+++|+++||+|++++|...... . .++.+.+..+...+++++.+|++|.+++.+++++ +|+|||
T Consensus 27 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih 106 (404)
T 1i24_A 27 TALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVH 106 (404)
T ss_dssp HHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHHhccCCCEEEE
Confidence 47899999999999998632100 0 0001111112245799999999999999999998 999999
Q ss_pred cCCCC------------------ChhhHHHHHHHHHHhCCc-ceEec-cc---ccccC---CCC--------------CC
Q 026978 65 TVAYP------------------QFLDQLEIVHAIKVAGNI-KRFLP-SE---FGCEE---DKV--------------RP 104 (230)
Q Consensus 65 ~~~~~------------------~~~~~~~ll~Aa~~ag~V-kr~v~-S~---~g~~~---~~~--------------~~ 104 (230)
+++.. ++.++.+++++|++.| + +|||. |+ ||... ++. .+
T Consensus 107 ~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~ 185 (404)
T 1i24_A 107 FGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYP 185 (404)
T ss_dssp CCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECC
T ss_pred CCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCC
Confidence 99863 2346889999999999 7 59885 32 55321 111 13
Q ss_pred CCchhHHHHHHHHHHHHHHH----cCCCEEEEeccccchh
Q 026978 105 LPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 105 ~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~ 140 (230)
..|...|..+|..+|++++. .|++++++||+..++.
T Consensus 186 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp 225 (404)
T 1i24_A 186 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 225 (404)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECS
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCC
Confidence 34556788999999998765 4999999999988764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=8.9e-13 Score=112.72 Aligned_cols=130 Identities=11% Similarity=0.107 Sum_probs=93.1
Q ss_pred CHHHHhhCC-----CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC---CCEEEEcCCCC---
Q 026978 1 MVKASVSSG-----HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE---VDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g-----~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g---~D~Vi~~~~~~--- 69 (230)
|+++|+++| |+|++++|+..... +...+++++.+|++|.+++.+++++ +|+|||+++..
T Consensus 17 l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~~~ 86 (364)
T 2v6g_A 17 LAEILPLADTPGGPWKVYGVARRTRPAW----------HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRST 86 (364)
T ss_dssp HHHHTTSTTCTTCSEEEEEEESSCCCSC----------CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCCCCCSS
T ss_pred HHHHHHhCCCCCCceEEEEEeCCCCccc----------cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCCCCcch
Confidence 478899999 99999999865321 1245799999999999999999999 99999999864
Q ss_pred -------ChhhHHHHHHHHHHh--CCcceEe--------ccc---ccccC------CCCCCCCc-hhHHHHHHHHHHHHH
Q 026978 70 -------QFLDQLEIVHAIKVA--GNIKRFL--------PSE---FGCEE------DKVRPLPP-FEAYLEKKRIVRRAI 122 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~a--g~Vkr~v--------~S~---~g~~~------~~~~~~~p-~~~~~~~K~~~e~~l 122 (230)
++.++.+++++|+++ + ++||| .|+ ||... ++..+..| ...|+.....++++.
T Consensus 87 ~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~ 165 (364)
T 2v6g_A 87 EQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEV 165 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhHHHHHHHHHHh
Confidence 356899999999998 8 99986 233 55421 12222222 335544333333333
Q ss_pred HHcC-CCEEEEeccccchhh
Q 026978 123 EAAQ-IPYTFVSANLCGAYF 141 (230)
Q Consensus 123 ~~~g-l~~tilr~g~~~~~~ 141 (230)
+..+ ++++++||+.+++..
T Consensus 166 ~~~~~~~~~ilRp~~v~G~~ 185 (364)
T 2v6g_A 166 EKKEGLTWSVHRPGNIFGFS 185 (364)
T ss_dssp TTSTTCEEEEEEESSEECCC
T ss_pred hcCCCceEEEECCCceeCCC
Confidence 3356 999999999988743
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=112.30 Aligned_cols=121 Identities=10% Similarity=0.037 Sum_probs=80.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|+.. ..+ ++.+|++|.+++.+++++ +|+|||+++..
T Consensus 18 l~~~L~~~g~~V~~~~r~~~---------------~~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 80 (315)
T 2ydy_A 18 VHKEFQQNNWHAVGCGFRRA---------------RPK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQP 80 (315)
T ss_dssp HHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEEEECC------------
T ss_pred HHHHHHhCCCeEEEEccCCC---------------CCC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCH
Confidence 47889999999999998632 013 788999999999999986 89999999853
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cc---cccc---CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCE---EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~---~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
++.++.+++++|+++| + |||. |+ ||.. .++..+..|...|..+|..+|++++..++++++|||+.
T Consensus 81 ~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~ 158 (315)
T 2ydy_A 81 DAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPI 158 (315)
T ss_dssp -------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeee
Confidence 2567899999999999 7 7774 32 4431 12233344556788999999999999899999999998
Q ss_pred cchh
Q 026978 137 CGAY 140 (230)
Q Consensus 137 ~~~~ 140 (230)
+++.
T Consensus 159 v~G~ 162 (315)
T 2ydy_A 159 LYGE 162 (315)
T ss_dssp EECS
T ss_pred eeCC
Confidence 8764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.9e-13 Score=117.33 Aligned_cols=134 Identities=11% Similarity=0.129 Sum_probs=95.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh------------hhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK------------EFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~------------~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+.... +..+.+. .....+++++.+|++|.+++. ++.++|+|||+++.
T Consensus 85 l~~~L~~~g~~V~~~~R~~~~~---~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 85 LIEALQGYSHRIYCFIRADNEE---IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPENMDTIIHAGAR 160 (427)
T ss_dssp HHHHHTTTEEEEEEEEECSSHH---HHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSSCCSEEEECCCC
T ss_pred HHHHHHcCCCEEEEEECCCChH---HHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcCCCCEEEECCcc
Confidence 4788989999999999986421 0101110 111368999999999988888 88899999999986
Q ss_pred C------------ChhhHHHHHHHHHHhCCcceEec-ccccc--c---------CCCCCC---CCchhHHHHHHHHHHHH
Q 026978 69 P------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGC--E---------EDKVRP---LPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 69 ~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~--~---------~~~~~~---~~p~~~~~~~K~~~e~~ 121 (230)
. ++.++.+++++|++ + +++||. |+.+. . ..+..+ ..|...|..+|..+|++
T Consensus 161 ~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~ 238 (427)
T 4f6c_A 161 TDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELK 238 (427)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHH
Confidence 4 35688999999999 7 899885 33222 1 011111 22456788999999999
Q ss_pred HHH---cCCCEEEEeccccchh
Q 026978 122 IEA---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 122 l~~---~gl~~tilr~g~~~~~ 140 (230)
+++ .|++++++|||.+++.
T Consensus 239 ~~~~~~~g~~~~ivRpg~v~G~ 260 (427)
T 4f6c_A 239 VLEAVNNGLDGRIVRVGNLTSP 260 (427)
T ss_dssp HHHHHHTTCCEEEEEECCEESC
T ss_pred HHHHHHcCCCEEEEeCCeeecC
Confidence 887 7999999999988764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.41 E-value=9.7e-13 Score=111.33 Aligned_cols=133 Identities=17% Similarity=0.088 Sum_probs=96.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh----cCCCeEEE-EecCCCHHHHHHHhcCCCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF----QGIGVTII-EGELDEHKKIVSILKEVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l----~~~gv~vv-~gD~~d~~~L~~al~g~D~Vi~~~~~~------ 69 (230)
|+++|+++||+|++++|+.. +.+.+... ...+++++ .+|++|.+++.++++++|+|||+++..
T Consensus 27 l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~ 100 (342)
T 1y1p_A 27 VVEQLLEHGYKVRGTARSAS------KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY 100 (342)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCH
T ss_pred HHHHHHHCCCEEEEEeCCcc------cHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCH
Confidence 47889999999999999743 22222111 12578888 899999999999999999999999864
Q ss_pred ------ChhhHHHHHHHHHH-hCCcceEec-cc---ccccC--------CCCC----------------CCCchhHHHHH
Q 026978 70 ------QFLDQLEIVHAIKV-AGNIKRFLP-SE---FGCEE--------DKVR----------------PLPPFEAYLEK 114 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~-ag~Vkr~v~-S~---~g~~~--------~~~~----------------~~~p~~~~~~~ 114 (230)
++.++.+++++|++ .+ ++|||. |+ ||... ++.. +..|...|..+
T Consensus 101 ~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 179 (342)
T 1y1p_A 101 DEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHH
Confidence 25678999999985 67 899885 33 43211 1111 12244567899
Q ss_pred HHHHHHHHHH------cCCCEEEEeccccchh
Q 026978 115 KRIVRRAIEA------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 115 K~~~e~~l~~------~gl~~tilr~g~~~~~ 140 (230)
|..+|.+++. .+++++++||+..++.
T Consensus 180 K~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~ 211 (342)
T 1y1p_A 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGT 211 (342)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEEEEESEEECC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEcCCceECC
Confidence 9999998865 2788999999887764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=8.1e-13 Score=110.08 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=92.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~-------- 70 (230)
|+++|+ +||+|++++|+.. ++.+|++|.+++.+++++ +|+|||+++...
T Consensus 16 l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~ 74 (299)
T 1n2s_A 16 LQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEP 74 (299)
T ss_dssp HHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCH
T ss_pred HHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCH
Confidence 467888 8999999998631 246899999999999997 999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSAN 135 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g 135 (230)
+.++.+++++|+++| + |||. | .||.. .++..+..|...|..+|..+|+++++...+++++||+
T Consensus 75 ~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~ 152 (299)
T 1n2s_A 75 ELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTS 152 (299)
T ss_dssp HHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeEEEeee
Confidence 456899999999999 7 6774 3 35532 1233344566678899999999999877899999999
Q ss_pred ccchh
Q 026978 136 LCGAY 140 (230)
Q Consensus 136 ~~~~~ 140 (230)
.+++.
T Consensus 153 ~v~G~ 157 (299)
T 1n2s_A 153 WVYAG 157 (299)
T ss_dssp SEECS
T ss_pred eecCC
Confidence 98764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.38 E-value=7.7e-13 Score=118.00 Aligned_cols=136 Identities=12% Similarity=0.153 Sum_probs=98.9
Q ss_pred CHHHHhhC---CCeEEEEEcCCCCCCCcchHhhhh-hh--------------cCCCeEEEEecCC------CHHHHHHHh
Q 026978 1 MVKASVSS---GHKTFVYARPVTQNSRPSKLEIHK-EF--------------QGIGVTIIEGELD------EHKKIVSIL 56 (230)
Q Consensus 1 lv~~Ll~~---g~~V~~l~R~~~~~~~p~k~~~l~-~l--------------~~~gv~vv~gD~~------d~~~L~~al 56 (230)
|+++|+++ |++|++++|+.+... ..+.+. .+ ...+++++.+|++ |.+.+.+++
T Consensus 89 l~~~Ll~~~~~g~~V~~l~R~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~ 165 (478)
T 4dqv_A 89 LVLELLRRLDVDGRLICLVRAESDED---ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLA 165 (478)
T ss_dssp HHHHHHHHSCTTCEEEEEECSSSHHH---HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEEECCCCcHH---HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHHHHHHHH
Confidence 47889998 999999999864210 011111 11 1258999999998 778999999
Q ss_pred cCCCEEEEcCCCC-----------ChhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCCCCch---------
Q 026978 57 KEVDVVISTVAYP-----------QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRPLPPF--------- 108 (230)
Q Consensus 57 ~g~D~Vi~~~~~~-----------~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~~~p~--------- 108 (230)
+++|+|||+++.. ++.++.+++++|++.| ++|||. |+ |+... .+..+..|.
T Consensus 166 ~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~ 244 (478)
T 4dqv_A 166 ETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGG 244 (478)
T ss_dssp HHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTT
T ss_pred cCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccc
Confidence 9999999999874 3578999999999999 999885 33 44311 111111111
Q ss_pred --hHHHHHHHHHHHHHHH----cCCCEEEEeccccchh
Q 026978 109 --EAYLEKKRIVRRAIEA----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 109 --~~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~ 140 (230)
..|..+|..+|.++++ .|++++++|||.+++.
T Consensus 245 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 245 WAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282 (478)
T ss_dssp SEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECC
T ss_pred cccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCC
Confidence 1288999999999876 4999999999998863
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-12 Score=106.12 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=90.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|+ .+|++|.+++.++++ ++|+|||+++...
T Consensus 28 l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~ 83 (292)
T 1vl0_A 28 IQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQY 83 (292)
T ss_dssp HHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCH
T ss_pred HHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCH
Confidence 467889999999999873 158899999999999 8999999998643
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSAN 135 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g 135 (230)
+.++.+++++|+++| + |||. |+ ||... ++..+..|...|..+|..+|++++..+.+++++||+
T Consensus 84 ~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~ 161 (292)
T 1vl0_A 84 DLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTA 161 (292)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCCeEEEeee
Confidence 346899999999999 8 8874 32 54321 233334455678899999999999988899999999
Q ss_pred ccchh
Q 026978 136 LCGAY 140 (230)
Q Consensus 136 ~~~~~ 140 (230)
.+++.
T Consensus 162 ~v~G~ 166 (292)
T 1vl0_A 162 WLYGD 166 (292)
T ss_dssp SEESS
T ss_pred eeeCC
Confidence 88854
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.4e-13 Score=118.81 Aligned_cols=134 Identities=11% Similarity=0.128 Sum_probs=97.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh------------hhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH------------KEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l------------~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+..... ..+.+ ......+++++.+|++|.++|. ++.++|+|||+++.
T Consensus 166 l~~~L~~~g~~V~~l~R~~~~~~---~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~ 241 (508)
T 4f6l_B 166 LIEALQGYSHRIYCFIRADNEEI---AWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPENMDTIIHAGAR 241 (508)
T ss_dssp HHHHTBTTEEEEEEEEESSSHHH---HHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC
T ss_pred HHHHHHhcCCEEEEEECCCChHH---HHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-CccCCCEEEECCce
Confidence 46788889999999999864210 00000 0112468999999999988887 88899999999986
Q ss_pred C------------ChhhHHHHHHHHHHhCCcceEec-ccccc--c---------CCCCCC---CCchhHHHHHHHHHHHH
Q 026978 69 P------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGC--E---------EDKVRP---LPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 69 ~------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~--~---------~~~~~~---~~p~~~~~~~K~~~e~~ 121 (230)
. ++.++.+++++|++ + ++|||+ |+.+. . ..+..+ ..|...|..+|..+|++
T Consensus 242 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~ 319 (508)
T 4f6l_B 242 TDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELK 319 (508)
T ss_dssp --------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHH
T ss_pred ecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHH
Confidence 4 35689999999998 6 789885 43222 1 011111 12456788999999999
Q ss_pred HHH---cCCCEEEEeccccchh
Q 026978 122 IEA---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 122 l~~---~gl~~tilr~g~~~~~ 140 (230)
+++ .|++++++|||.+++.
T Consensus 320 ~~~~~~~gi~~~ilRp~~v~G~ 341 (508)
T 4f6l_B 320 VLEAVNNGLDGRIVRVGNLTSP 341 (508)
T ss_dssp HHHHHHTTCEEEEEEECCEESC
T ss_pred HHHHHHcCCCEEEEecceeccC
Confidence 886 7999999999988764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.8e-12 Score=108.17 Aligned_cols=133 Identities=11% Similarity=0.113 Sum_probs=96.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc------CC-CeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ------GI-GVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~------~~-gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~- 70 (230)
|+++|+++|++|++++|+..... ..+ +..+. .. +++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 44 l~~~L~~~g~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~ 119 (381)
T 1n7h_A 44 LTEFLLGKGYEVHGLIRRSSNFN-TQR---INHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHV 119 (381)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CTT---TTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred HHHHHHHCCCEEEEEecCCcccc-chh---hhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCc
Confidence 47889999999999999865311 001 11111 12 789999999999999999996 599999998642
Q ss_pred --------------hhhHHHHHHHHHHhCCcc-----eEec-c---ccccc---CCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------FLDQLEIVHAIKVAGNIK-----RFLP-S---EFGCE---EDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------~~~~~~ll~Aa~~ag~Vk-----r~v~-S---~~g~~---~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.++.+|+++|++.+ ++ |||. | .||.. .++..+..|...|..+|..+|.+++.
T Consensus 120 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 198 (381)
T 1n7h_A 120 AVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVN 198 (381)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence 346899999999998 87 8885 3 35532 12333344556788999999998875
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.+++++++|+...+
T Consensus 199 ~~~~~~~~~~~~r~~~~~ 216 (381)
T 1n7h_A 199 YREAYGLFACNGILFNHE 216 (381)
T ss_dssp HHHHHCCEEEEEEECCEE
T ss_pred HHHHhCCcEEEEEeCcee
Confidence 48999998865443
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=8.3e-12 Score=104.92 Aligned_cols=147 Identities=22% Similarity=0.194 Sum_probs=105.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|+. .+|++|.+++.++++ ++|+|||+++...
T Consensus 19 l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~ 75 (321)
T 1e6u_A 19 IRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTY 75 (321)
T ss_dssp HHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred HHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhC
Confidence 4788999999999987641 158999999999999 9999999998642
Q ss_pred --------hhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCC----CCCch-hHHHHHHHHHHHHHHH----c
Q 026978 71 --------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVR----PLPPF-EAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~----~~~p~-~~~~~~K~~~e~~l~~----~ 125 (230)
+.++.+++++|+++| ++|||. |+ ||... ++.. +..|. ..|..+|..+|+++++ .
T Consensus 76 ~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 154 (321)
T 1e6u_A 76 PADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 357889999999999 999985 33 55321 1211 33453 4778999999998876 5
Q ss_pred CCCEEEEeccccchhhcc------c----ccC-CCC---CC-CcEEEecCCCcccCCCCCC
Q 026978 126 QIPYTFVSANLCGAYFVN------V----LLR-PFE---SH-DDVVVYGSGEAKALPPPED 171 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~------~----~~~-~~~---~~-~~~~i~g~G~~~~~~~~~~ 171 (230)
+++++++||+.+++.... . ++. +.. .+ ..+.++|+|+..+..++.+
T Consensus 155 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~ 215 (321)
T 1e6u_A 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD 215 (321)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHH
Confidence 999999999988875432 1 111 100 01 3677889998776555443
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-11 Score=104.02 Aligned_cols=129 Identities=15% Similarity=0.095 Sum_probs=96.1
Q ss_pred CHHHHhhCC-------CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCC---
Q 026978 1 MVKASVSSG-------HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g-------~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~--- 69 (230)
|+++|+++| ++|++++|+..... .....+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 30 l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~ 100 (342)
T 2hrz_A 30 LTQRLVKDGSLGGKPVEKFTLIDVFQPEAP---------AGFSGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGE 100 (342)
T ss_dssp HHHHHHHHCEETTEEEEEEEEEESSCCCCC---------TTCCSEEEEEECCTTSTTHHHHHHHTCCSEEEECCCCCHHH
T ss_pred HHHHHHhcCCcccCCCceEEEEEccCCccc---------cccCCceeEEEcCCCCHHHHHHHHhcCCCEEEECCccCccc
Confidence 478899999 89999999864321 1113568999999999999999995 999999999864
Q ss_pred -----------ChhhHHHHHHHHHHhC----CcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------QFLDQLEIVHAIKVAG----NIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~ag----~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.++.+++++|++.+ .++|||. | .||.. .++..+..|...|..+|..+|.++++
T Consensus 101 ~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~ 180 (342)
T 2hrz_A 101 AELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYS 180 (342)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 2457899999998874 3789885 3 25532 12333344566788999999998875
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.+++++++|++..+
T Consensus 181 ~~~~~~~~~ir~~~v~ 196 (342)
T 2hrz_A 181 RRGFFDGIGIRLPTIC 196 (342)
T ss_dssp HTTSCEEEEEEECEET
T ss_pred HhcCCCceeEEeeeEE
Confidence 37899999976554
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-11 Score=112.62 Aligned_cols=159 Identities=19% Similarity=0.211 Sum_probs=110.3
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHH-HHHHhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKK-IVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~-L~~al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++ ||+|++++|+..... .+ +...+++++.+|++|.++ +.++++++|+|||+++...
T Consensus 331 l~~~Ll~~~g~~V~~~~r~~~~~~------~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~ 402 (660)
T 1z7e_A 331 LTERLLREDHYEVYGLDIGSDAIS------RF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP 402 (660)
T ss_dssp HHHHHHHSSSEEEEEEESCCTTTG------GG--TTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSH
T ss_pred HHHHHHhcCCCEEEEEEcCchhhh------hh--ccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCccccccCH
Confidence 47889998 899999999864321 11 124689999999999765 7889999999999998642
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---ccccC----CCCCC------C-CchhHHHHHHHHHHHHHHH----
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE----DKVRP------L-PPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~----~~~~~------~-~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.++.+++++|+++| +|||. |+ ||... ++..+ . .|...|..+|..+|++++.
T Consensus 403 ~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~ 480 (660)
T 1z7e_A 403 LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 480 (660)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 357899999999988 78875 33 55321 12111 1 2445688999999998854
Q ss_pred cCCCEEEEeccccchhhcc--------------ccc-CCCCCCCcEEEecCCCcccCCCCC
Q 026978 125 AQIPYTFVSANLCGAYFVN--------------VLL-RPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~~--------------~~~-~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
.|++++++||+.+++.... .++ .... +..+.++|+|++.+..+..
T Consensus 481 ~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v 540 (660)
T 1z7e_A 481 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDI 540 (660)
T ss_dssp HCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHH-TCCEEEEGGGCCEEECEEH
T ss_pred cCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHc-CCCcEEeCCCCeEEEEEEH
Confidence 5999999999988764321 111 1111 2567788888876644443
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.7e-12 Score=113.94 Aligned_cols=147 Identities=12% Similarity=0.005 Sum_probs=97.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++||+|++++|+.... +.+.+|+.| .+.++++++|+|||+++..
T Consensus 163 l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~ 223 (516)
T 3oh8_A 163 LTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGRFNDSHKE 223 (516)
T ss_dssp HHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTS--CCTTTTTTCSEEEECCCC-----CCGGGHH
T ss_pred HHHHHHHCCCEEEEEECCCCCc-----------------cceeecccc--hhHHhcCCCCEEEECCCCccccccchhHHH
Confidence 5789999999999999985421 125678765 3577889999999999863
Q ss_pred -----ChhhHHHHHHH-HHHhCCcceEec-c---ccc-cc----CCCCCCCCchhHHHHHHHHHHHHH---HHcCCCEEE
Q 026978 70 -----QFLDQLEIVHA-IKVAGNIKRFLP-S---EFG-CE----EDKVRPLPPFEAYLEKKRIVRRAI---EAAQIPYTF 131 (230)
Q Consensus 70 -----~~~~~~~ll~A-a~~ag~Vkr~v~-S---~~g-~~----~~~~~~~~p~~~~~~~K~~~e~~l---~~~gl~~ti 131 (230)
++.++.+|+++ |++.| ++|||. | .|| .. .++..+. |...|...|...|..+ +..|+++++
T Consensus 224 ~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~~~gi~~~i 301 (516)
T 3oh8_A 224 AIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATAPASDAGKRVAF 301 (516)
T ss_dssp HHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 35679999999 66677 999985 3 366 21 1222222 3345666777776544 457999999
Q ss_pred Eeccccchhhc---cccc-CCCCCCCcEEEecCCCcccCCCCC
Q 026978 132 VSANLCGAYFV---NVLL-RPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 132 lr~g~~~~~~~---~~~~-~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
+||+.+++... +.++ .... +...++|+|++.+..++.
T Consensus 302 lRp~~v~Gp~~~~~~~~~~~~~~--g~~~~~g~g~~~~~~i~v 342 (516)
T 3oh8_A 302 IRTGVALSGRGGMLPLLKTLFST--GLGGKFGDGTSWFSWIAI 342 (516)
T ss_dssp EEECEEEBTTBSHHHHHHHTTC-----CCCCTTSCCEECEEEH
T ss_pred EEeeEEECCCCChHHHHHHHHHh--CCCcccCCCCceEceEeH
Confidence 99999987432 1111 1222 223467888877644443
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.24 E-value=7.1e-11 Score=96.87 Aligned_cols=117 Identities=16% Similarity=0.091 Sum_probs=89.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~-------- 70 (230)
|+++|+ +|++|++++|+... . .+ +.+|++|.+++.+++++ +|+|||+++...
T Consensus 16 l~~~L~-~g~~V~~~~r~~~~-------------~-~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 77 (273)
T 2ggs_A 16 LSRLLS-ERHEVIKVYNSSEI-------------Q-GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEK 77 (273)
T ss_dssp HHHHHT-TTSCEEEEESSSCC-------------T-TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCH
T ss_pred HHHHHh-cCCeEEEecCCCcC-------------C-CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCH
Confidence 467788 58999999997521 1 23 78999999999999997 999999998653
Q ss_pred -------hhhHHHHHHHHHHhCCcceEec-cc---ccccC---CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLP-SE---FGCEE---DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~---~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
+.+..+++++|++.| + |||. |+ |+... ++..+..|...|..+|..+|.+++. +++++||++.
T Consensus 78 ~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~ 153 (273)
T 2ggs_A 78 EKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSG 153 (273)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECC
T ss_pred HHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEeccc
Confidence 346899999999998 7 7774 32 43221 2223334556788999999999986 8999999998
Q ss_pred cch
Q 026978 137 CGA 139 (230)
Q Consensus 137 ~~~ 139 (230)
+++
T Consensus 154 v~G 156 (273)
T 2ggs_A 154 IFR 156 (273)
T ss_dssp CBS
T ss_pred ccc
Confidence 874
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=3e-11 Score=100.76 Aligned_cols=169 Identities=12% Similarity=-0.019 Sum_probs=99.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++||+|++++|++... .+ .. .+...++++++|+|||+++..
T Consensus 16 L~~~L~~~G~~V~~l~R~~~~~---------------~~---~~----~~~~~~~l~~~d~vihla~~~i~~~~~~~~~~ 73 (298)
T 4b4o_A 16 LTQLLNARGHEVTLVSRKPGPG---------------RI---TW----DELAASGLPSCDAAVNLAGENILNPLRRWNET 73 (298)
T ss_dssp HHHHHHHTTCEEEEEESSCCTT---------------EE---EH----HHHHHHCCCSCSEEEECCCCCSSCTTSCCCHH
T ss_pred HHHHHHHCCCEEEEEECCCCcC---------------ee---ec----chhhHhhccCCCEEEEeccCcccchhhhhhhh
Confidence 5789999999999999974321 11 11 233456789999999998742
Q ss_pred --------ChhhHHHHHHHHHHhCCcce--Eec-c---cccccC----CCCCCCCchhHHHHHHHHHHHHH--HHcCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKR--FLP-S---EFGCEE----DKVRPLPPFEAYLEKKRIVRRAI--EAAQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr--~v~-S---~~g~~~----~~~~~~~p~~~~~~~K~~~e~~l--~~~gl~~ 129 (230)
++.++.+|++++++++ +++ ||. | .||... ++..+..|...+...+...|... ...++++
T Consensus 74 ~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~~~~~~ 152 (298)
T 4b4o_A 74 FQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQ 152 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSSSSSEE
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhccCCce
Confidence 1457889999999987 655 664 3 365432 22233333333334444444432 3468999
Q ss_pred EEEeccccchhhcc---ccc-CCCCCCCcEEEecCCCcccCCCCCC-hhhhhhhheeecCCcccccCCCC
Q 026978 130 TFVSANLCGAYFVN---VLL-RPFESHDDVVVYGSGEAKALPPPED-IPISIMHSLLAKGDSMNFELGED 194 (230)
Q Consensus 130 tilr~g~~~~~~~~---~~~-~~~~~~~~~~i~g~G~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 194 (230)
+++|++..++.... .+. .... .....+|+|++.+..++.+ ++.++...+.-....-.|+++++
T Consensus 153 ~~~r~~~v~g~~~~~~~~~~~~~~~--~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~ 220 (298)
T 4b4o_A 153 VVVRSGVVLGRGGGAMGHMLLPFRL--GLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAP 220 (298)
T ss_dssp EEEEECEEECTTSHHHHHHHHHHHT--TCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCS
T ss_pred eeeeeeeEEcCCCCchhHHHHHHhc--CCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECC
Confidence 99999888764321 111 1111 2334579999988776654 44444433322212224666543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.7e-10 Score=91.50 Aligned_cols=128 Identities=17% Similarity=0.227 Sum_probs=91.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+... .+.+..-....++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 ~a~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 94 (281)
T 3m1a_A 21 IAEAAVAAGDTVIGTARRTEA------LDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA 94 (281)
T ss_dssp HHHHHHHTTCEEEEEESSGGG------GHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECC
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence 478999999999999997532 222211113578999999999999998887 789999999863
Q ss_pred ---------------Chhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+ .+.++..+++.+ .+++|. |+..... +..+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~ 169 (281)
T 3m1a_A 95 FEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL----SFAGFSAYSATKAALEQLSEGLADEV 169 (281)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC----CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC----CCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 1233 566677778888 788885 4332211 112345788999998877653
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||++..
T Consensus 170 ~~~gi~v~~v~Pg~v~t 186 (281)
T 3m1a_A 170 APFGIKVLIVEPGAFRT 186 (281)
T ss_dssp GGGTEEEEEEEECCBCC
T ss_pred hccCcEEEEEecCcccc
Confidence 589999999998754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-10 Score=98.54 Aligned_cols=96 Identities=11% Similarity=-0.006 Sum_probs=78.2
Q ss_pred CCCe-EEEEecC-CCHHHHHHHhcCCCEEEEcCCCC-----------ChhhHHHHHHHHHHhCCcc-eEec-ccccccCC
Q 026978 36 GIGV-TIIEGEL-DEHKKIVSILKEVDVVISTVAYP-----------QFLDQLEIVHAIKVAGNIK-RFLP-SEFGCEED 100 (230)
Q Consensus 36 ~~gv-~vv~gD~-~d~~~L~~al~g~D~Vi~~~~~~-----------~~~~~~~ll~Aa~~ag~Vk-r~v~-S~~g~~~~ 100 (230)
..|. +++.+|. .|.+++.++++++|+|||+++.. ++.++.+|+++|+++| ++ |||. |+.+...
T Consensus 22 ~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~- 99 (369)
T 3st7_A 22 STTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ- 99 (369)
T ss_dssp HHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS-
T ss_pred hCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC-
Confidence 3455 7888888 89999999999999999999864 4578999999999999 88 8885 4333221
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEeccccchh
Q 026978 101 KVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 101 ~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~g~~~~~ 140 (230)
..+|..+|..+|+++++ .|++++++||+.+++.
T Consensus 100 -------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~ 136 (369)
T 3st7_A 100 -------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136 (369)
T ss_dssp -------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECT
T ss_pred -------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCC
Confidence 24788999999999876 7999999999988874
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.2e-09 Score=88.03 Aligned_cols=127 Identities=15% Similarity=0.141 Sum_probs=89.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. +.+.+ +.+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 95 (260)
T 1nff_A 23 HVRAMVAEGAKVVFGDILDE------EGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG 95 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999742 22221 123 2348899999999999999888 8999999998531
Q ss_pred -----------------hhhH----HHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQ----LEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+. +.++..+++.+ ..|+|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~ 169 (260)
T 1nff_A 96 TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG-----TVACHGYTATKFAVRGLTKSTAL 169 (260)
T ss_dssp CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCC-----CCCchhHHHHHHHHHHHHHHHHH
Confidence 1223 45566677777 788874 33 22211 11234677899998876653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 170 e~~~~gi~v~~v~Pg~v~t~ 189 (260)
T 1nff_A 170 ELGPSGIRVNSIHPGLVKTP 189 (260)
T ss_dssp HHGGGTEEEEEEEECCBCSG
T ss_pred HhCccCcEEEEEEeCCCCCC
Confidence 5899999999988654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-09 Score=88.74 Aligned_cols=129 Identities=10% Similarity=0.130 Sum_probs=90.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 27 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 27 IAITFATAGASVVVSDINAD------AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHHHTTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 47889999999999999743 2111 11221 2468889999999999998887 8999999998531
Q ss_pred ------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++ ++.+ .+++|. |+..... +..+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~~~~~~~~~~ 175 (255)
T 1fmc_A 101 PKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN----KNINMTSYASSKAAASHLVRNMAF 175 (255)
T ss_dssp CCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC----CCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC----CCCCCcccHHHHHHHHHHHHHHHH
Confidence 23556666666 4567 788875 4332211 111345678999998877654
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.++.+++++||++...
T Consensus 176 ~~~~~~i~v~~v~Pg~v~t~ 195 (255)
T 1fmc_A 176 DLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp HHHTTTEEEEEEEECSBCSH
T ss_pred HhhhcCcEEEEEecccCcch
Confidence 4899999999988754
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.8e-09 Score=89.56 Aligned_cols=133 Identities=14% Similarity=0.202 Sum_probs=92.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++.+|+..... .++.+.+... ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 ia~~L~~~G~~V~~~~r~~~~r~-~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~ 99 (324)
T 3u9l_A 21 TAEALAGAGHRVYASMRDIVGRN-ASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV 99 (324)
T ss_dssp HHHHHHHTTCEEEEEESCTTTTT-HHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCB
T ss_pred HHHHHHHCCCEEEEecCcccccC-HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 47899999999999999854432 3333332221 12468999999999999999887 899999999953
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
|+.+..++++++ ++.+ ..++|. |+.+..... ......|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~~la 175 (324)
T 3u9l_A 100 FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT---PPYLAPYFAAKAAMDAIAVQYA 175 (324)
T ss_dssp CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---CSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC---CCcchhHHHHHHHHHHHHHHHH
Confidence 234667777777 6777 788874 432221100 01124678999998876653
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+.++.|+||++.
T Consensus 176 ~el~~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 176 RELSRWGIETSIIVPGAFT 194 (324)
T ss_dssp HHHHTTTEEEEEEEECCC-
T ss_pred HHhhhhCcEEEEEECCccc
Confidence 58999999999884
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.4e-09 Score=85.08 Aligned_cols=121 Identities=10% Similarity=0.102 Sum_probs=86.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.... ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 89 (250)
T 2fwm_X 23 TALAFVEAGAKVTGFDQAFTQE-------------QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA 89 (250)
T ss_dssp HHHHHHHTTCEEEEEESCCCSS-------------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCchhhh-------------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 4788999999999999975321 2358899999999999998887 7899999998531
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e 163 (250)
T 2fwm_X 90 TDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTP-----RIGMSAYGASKAALKSLALSVGLE 163 (250)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC-----CCCCchHHHHHHHHHHHHHHHHHH
Confidence 23455666665 5667 688874 33 33211 11234677899998877653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 164 ~~~~gi~v~~v~Pg~v~t~ 182 (250)
T 2fwm_X 164 LAGSGVRCNVVSPGSTDTD 182 (250)
T ss_dssp HGGGTCEEEEEEECCC---
T ss_pred hCccCCEEEEEECCcccCc
Confidence 4899999999988653
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.04 E-value=5.1e-09 Score=84.08 Aligned_cols=127 Identities=14% Similarity=0.104 Sum_probs=84.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +.+.+..- ..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~ 93 (234)
T 2ehd_A 21 TARLLHAKGYRVGLMARDEK------RLQALAAE-LEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP 93 (234)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHH-STTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHH-hhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 47889999999999999742 22222111 1378999999999999888776 7899999998531
Q ss_pred ----------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+. +.+++++++.+ .+|+|. |+.+... +..+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~ 168 (234)
T 2ehd_A 94 VHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN----PFKGGAAYNASKFGLLGLAGAAMLDL 168 (234)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC----CCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 1222 45666677777 789875 4332211 111334677899887766542
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 169 ~~~gi~v~~v~Pg~v~t 185 (234)
T 2ehd_A 169 REANVRVVNVLPGSVDT 185 (234)
T ss_dssp GGGTEEEEEEECC----
T ss_pred hhcCcEEEEEEeCCCcC
Confidence 589999999997653
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.4e-09 Score=85.29 Aligned_cols=124 Identities=10% Similarity=0.111 Sum_probs=89.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+.... ....++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 44 ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 111 (260)
T 3un1_A 44 LVRAYRDRNYRVVATSRSIKPS------------ADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP 111 (260)
T ss_dssp HHHHHHHTTCEEEEEESSCCCC------------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCChhhc------------ccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence 4789999999999999986432 13478999999999999988887 899999999863
Q ss_pred ---------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+.... +..+...|..+|..++.+.+.
T Consensus 112 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~---~~~~~~~Y~~sKaa~~~l~~~la~e 187 (260)
T 3un1_A 112 FVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPM---VGMPSALASLTKGGLNAVTRSLAME 187 (260)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCB---TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCC---CCCccHHHHHHHHHHHHHHHHHHHH
Confidence 133556667666 5677 678774 33 221111 112345677899998877653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||+....
T Consensus 188 ~~~~gI~vn~v~PG~v~t~ 206 (260)
T 3un1_A 188 FSRSGVRVNAVSPGVIKTP 206 (260)
T ss_dssp TTTTTEEEEEEEECCBCCT
T ss_pred hCcCCeEEEEEeecCCCCC
Confidence 4899999999987643
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=86.36 Aligned_cols=128 Identities=11% Similarity=0.134 Sum_probs=88.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hh---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+.+. .+ ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 23 IAEKLASAGSTVIITGTSGE------RAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT 96 (248)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCChH------HHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 47889999999999999742 222111 11 13468899999999999999887 899999999853
Q ss_pred C-------------------hhhH----HHHHHHHHHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQ----LEIVHAIKVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+. +.+++.+++.+ .+|||. |+. +.... .+...|..+|...+.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 170 (248)
T 2pnf_A 97 RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGN-----VGQVNYSTTKAGLIGFTKS 170 (248)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCC-----CCCchHHHHHHHHHHHHHH
Confidence 1 2234 34455566677 789885 432 22111 1234677899988876653
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||++...
T Consensus 171 la~e~~~~~i~v~~v~Pg~v~t~ 193 (248)
T 2pnf_A 171 LAKELAPRNVLVNAVAPGFIETD 193 (248)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCG
T ss_pred HHHHhcccCeEEEEEEeceecCc
Confidence 4899999999987654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.2e-09 Score=87.91 Aligned_cols=129 Identities=14% Similarity=0.120 Sum_probs=86.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHh--------cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSIL--------KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al--------~g~D~Vi~~~~~~ 69 (230)
|+++|+++|++|++++|+.. +.+. ...+. ...++++.+|++|.+++.+++ .++|+|||+++..
T Consensus 30 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 30 IVEEFAGFGAVIHTCARNEY------ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCC
Confidence 47889999999999999742 2111 11221 235889999999999988887 5789999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ .+|+|. |+...... ..+...|..+|..++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~l 178 (266)
T 1xq1_A 104 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS----ASVGSIYSATKGALNQLARNL 178 (266)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC--------------CCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccC----CCCCchHHHHHHHHHHHHHHH
Confidence 133556777777 5677 789874 33221110 01234678899998877654
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 179 a~e~~~~gi~v~~v~Pg~v~t~ 200 (266)
T 1xq1_A 179 ACEWASDGIRANAVAPAVIATP 200 (266)
T ss_dssp HHHHGGGTCEEEEEECCSCC--
T ss_pred HHHHhHhCcEEEEEeeCCCccc
Confidence 4899999999988754
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=88.82 Aligned_cols=124 Identities=9% Similarity=0.097 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc----CCCEEEEcCCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK----EVDVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~----g~D~Vi~~~~~~~------ 70 (230)
|+++|+++|++|++++|+... +.. .+.+|++|.+++.++++ ++|+|||+++...
T Consensus 17 l~~~L~~~g~~V~~~~r~~~~------------~~~----~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~ 80 (255)
T 2dkn_A 17 LKELLARAGHTVIGIDRGQAD------------IEA----DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSG 80 (255)
T ss_dssp HHHHHHHTTCEEEEEESSSSS------------EEC----CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHH
T ss_pred HHHHHHhCCCEEEEEeCChhH------------ccc----cccCCcccHHHHHHHHHHcCCCccEEEECCCCCCcchhHH
Confidence 478899999999999997532 111 16789999999999887 8999999998642
Q ss_pred ------hhhHHHHHHHHHHh----CCcceEec-ccc-cccCCCCC---------------------CCCchhHHHHHHHH
Q 026978 71 ------FLDQLEIVHAIKVA----GNIKRFLP-SEF-GCEEDKVR---------------------PLPPFEAYLEKKRI 117 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~a----g~Vkr~v~-S~~-g~~~~~~~---------------------~~~p~~~~~~~K~~ 117 (230)
+.+..++++++.+. + .+|+|. |+. +....... ...+...|..+|..
T Consensus 81 ~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 159 (255)
T 2dkn_A 81 LVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYA 159 (255)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHH
Confidence 35677888877664 6 688874 332 21111000 00134467789999
Q ss_pred HHHHHHH-------cCCCEEEEeccccchhh
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~~~~ 141 (230)
++.+++. .|+++++++||++...+
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~ 190 (255)
T 2dkn_A 160 VTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190 (255)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence 8887754 58999999999887643
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.4e-09 Score=86.36 Aligned_cols=130 Identities=13% Similarity=0.124 Sum_probs=89.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|++++|+.. +.+. .+.++ ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 29 la~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 29 CVTALAEAGARVIIADLDEA------MATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICI 102 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 1111 11221 2458899999999999988876 7899999998421
Q ss_pred --------------------hhhHHHHHHHHH----HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FLDQLEIVHAIK----VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~----~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++. +.+ ..++|. |..+.... +..|...|..+|..++.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~ 178 (260)
T 3awd_A 103 SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN---RPQQQAAYNASKAGVHQYIRS 178 (260)
T ss_dssp CSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---SSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC---CCCCccccHHHHHHHHHHHHH
Confidence 234556666654 356 678774 33443211 111235688999998887654
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|++++.|+||++...
T Consensus 179 l~~e~~~~gi~v~~v~pg~v~t~ 201 (260)
T 3awd_A 179 LAAEWAPHGIRANAVAPTYIETT 201 (260)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCT
T ss_pred HHHHhhhcCeEEEEEEeeeeccc
Confidence 5899999999988653
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-08 Score=82.71 Aligned_cols=129 Identities=17% Similarity=0.189 Sum_probs=88.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~-------- 69 (230)
++++|+++|++|++++|+.. +.+.+.. ...+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~ 95 (244)
T 1cyd_A 23 TVKALHASGAKVVAVTRTNS------DLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEV 95 (244)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHH-hccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccC
Confidence 47889999999999999742 2222211 12478899999999999999987 479999999853
Q ss_pred -----------ChhhHHHHHHHHHHh----CCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cC
Q 026978 70 -----------QFLDQLEIVHAIKVA----GNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQ 126 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~g 126 (230)
++.+..++++++... +..+|||. |+...... ..+...|..+|...+.+.+. .+
T Consensus 96 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~g 171 (244)
T 1cyd_A 96 TKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT----FPNLITYSSTKGAMTMLTKAMAMELGPHK 171 (244)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC----CCCcchhHHHHHHHHHHHHHHHHHhhhcC
Confidence 134556666666543 31367774 43221111 11234677999998887754 58
Q ss_pred CCEEEEeccccchh
Q 026978 127 IPYTFVSANLCGAY 140 (230)
Q Consensus 127 l~~tilr~g~~~~~ 140 (230)
+.++.++||+....
T Consensus 172 i~v~~v~pg~v~t~ 185 (244)
T 1cyd_A 172 IRVNSVNPTVVLTD 185 (244)
T ss_dssp EEEEEEEECCBTTH
T ss_pred eEEEEEecCcccCc
Confidence 99999999988654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=8.2e-09 Score=83.75 Aligned_cols=129 Identities=13% Similarity=0.207 Sum_probs=87.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCe-EEEEecCCCHHHHHHHh------cCCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGV-TIIEGELDEHKKIVSIL------KEVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv-~vv~gD~~d~~~L~~al------~g~D~Vi~~~~~~~-- 70 (230)
|+++|+++|++|++++|+.. +.+.+ +.+ ...+ .++.+|++|.+++.+++ .++|+|||+++...
T Consensus 27 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~ 99 (254)
T 2wsb_A 27 ICRAFAASGARLILIDREAA------ALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLH 99 (254)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCC
Confidence 47889999999999999742 22211 122 2345 88999999999998887 47899999998531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ .+|||. |+ .+.... +..|...|..+|...+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~~~~ 175 (254)
T 2wsb_A 100 DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN---RPQFASSYMASKGAVHQLTRALAA 175 (254)
T ss_dssp CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---SSSCBHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC---CCCcchHHHHHHHHHHHHHHHHHH
Confidence 123 334445556677 788875 33 222111 112335788999998877653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+++++|+||++...
T Consensus 176 ~~~~~gi~v~~v~Pg~v~t~ 195 (254)
T 2wsb_A 176 EWAGRGVRVNALAPGYVATE 195 (254)
T ss_dssp HHGGGTEEEEEEEECCBCSH
T ss_pred HHhhcCeEEEEEEecccCch
Confidence 4899999999988654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=8.2e-09 Score=84.50 Aligned_cols=128 Identities=10% Similarity=0.167 Sum_probs=87.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 23 IAEGFAKEGAHIVLVARQVD------RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTG 96 (263)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 47889999999999999742 22211 1221 2458899999999999988887 899999999853
Q ss_pred C-------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++ ++.+ .+++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 170 (263)
T 3ai3_A 97 SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPL-----WYEPIYNVTKAALMMFSKT 170 (263)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC-----CCcchHHHHHHHHHHHHHH
Confidence 1 22344455544 4567 788874 33 222111 1234677899988876653
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 171 la~e~~~~gi~v~~v~Pg~v~t~ 193 (263)
T 3ai3_A 171 LATEVIKDNIRVNCINPGLILTP 193 (263)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHhhhcCcEEEEEecCcccCc
Confidence 5899999999988653
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-08 Score=83.01 Aligned_cols=127 Identities=14% Similarity=0.107 Sum_probs=89.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~ 93 (254)
T 1hdc_A 21 AARQAVAAGARVVLADVLDE------EGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93 (254)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999742 22221 122 2357889999999999988887 8999999998531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~la~ 167 (254)
T 1hdc_A 94 FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL-----ALTSSYGASKWGVRGLSKLAAV 167 (254)
T ss_dssp CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-----CCchhHHHHHHHHHHHHHHHHH
Confidence 112 246677777887 788874 43 332111 1234677899988876653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 168 e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 168 ELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHGGGTEEEEEEEECSBCCH
T ss_pred HhhhcCeEEEEEecccCcCc
Confidence 5899999999988654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-08 Score=82.98 Aligned_cols=129 Identities=10% Similarity=0.073 Sum_probs=87.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. +.+.+ ..+ ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 28 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 100 (263)
T 3ak4_A 28 IARALDKAGATVAIADLDVM------AAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100 (263)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 47889999999999999742 22221 122 2368899999999999998887 8999999998531
Q ss_pred -----------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++.. .+...++|. |+...... ..+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e 176 (263)
T 3ak4_A 101 PAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG----APLLAHYSASKFAVFGWTQALARE 176 (263)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC----CCCchhHHHHHHHHHHHHHHHHHH
Confidence 2344556666543 231357764 33222111 11234677899988876653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 177 ~~~~gi~v~~v~Pg~v~t~ 195 (263)
T 3ak4_A 177 MAPKNIRVNCVCPGFVKTA 195 (263)
T ss_dssp HGGGTCEEEEEEECSBTTH
T ss_pred HhHcCeEEEEEecccccCh
Confidence 4899999999988653
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-08 Score=82.22 Aligned_cols=129 Identities=11% Similarity=0.168 Sum_probs=87.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhh-c--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEF-Q--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l-~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+.+ ..+ . ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 91 (250)
T 2cfc_A 18 IATRFLARGDRVAALDLSAE------TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGIT 91 (250)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 47889999999999999742 22111 112 1 2358899999999999998887 899999999752
Q ss_pred C----------------------hhhH----HHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 70 Q----------------------FLDQ----LEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 70 ~----------------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
. +.+. +.++..+++.+ .+++|. |+...... ..+...|..+|..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~ 166 (250)
T 2cfc_A 92 GNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVA----FPGRSAYTTSKGAVLQLT 166 (250)
T ss_dssp CCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHH
T ss_pred CCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC----CCCchhHHHHHHHHHHHH
Confidence 1 1122 34455566677 788874 43222111 112346779999988776
Q ss_pred HH-------cCCCEEEEeccccchh
Q 026978 123 EA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~~ 140 (230)
+. .|+.++.++||++...
T Consensus 167 ~~l~~e~~~~gi~v~~v~Pg~v~t~ 191 (250)
T 2cfc_A 167 KSVAVDYAGSGIRCNAVCPGMIETP 191 (250)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCST
T ss_pred HHHHHHhcccCeEEEEEEeCcCccC
Confidence 54 4899999999987653
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.8e-09 Score=83.74 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=87.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ..+++++.+|++|.+++.++++ .+|+|||+++...
T Consensus 22 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~ 95 (251)
T 1zk4_A 22 IATKFVEEGAKVMITGRHSD------VGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN 95 (251)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 47889999999999999742 21111 1221 1478999999999999988877 4899999998531
Q ss_pred ------------------hh----hHHHHHHHHHHhCCc-ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH---
Q 026978 71 ------------------FL----DQLEIVHAIKVAGNI-KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE--- 123 (230)
Q Consensus 71 ------------------~~----~~~~ll~Aa~~ag~V-kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~--- 123 (230)
+. ..+.+++++++.+ . ++||. |+...... ..+...|..+|..++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~~a 170 (251)
T 1zk4_A 96 KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVG----DPSLGAYNASKGAVRIMSKSAA 170 (251)
T ss_dssp CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccC----CCCCccchHHHHHHHHHHHHHH
Confidence 11 2344566666677 7 78874 43221111 1123467789988886654
Q ss_pred ------HcCCCEEEEeccccchh
Q 026978 124 ------AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ------~~gl~~tilr~g~~~~~ 140 (230)
..++.++.|+||++...
T Consensus 171 ~e~~~~~~~i~v~~v~Pg~v~t~ 193 (251)
T 1zk4_A 171 LDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp HHHHHTTCSEEEEEEEECCBCCH
T ss_pred HHhcccCCCeEEEEEeeCcCcch
Confidence 35899999999988654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-08 Score=82.52 Aligned_cols=129 Identities=10% Similarity=0.142 Sum_probs=89.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. . ...+.+... ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 20 ia~~l~~~G~~V~~~~r~~~-~---~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 94 (255)
T 2q2v_A 20 IAQVLARAGANIVLNGFGDP-A---PALAEIARH-GVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP 94 (255)
T ss_dssp HHHHHHHTTCEEEEECSSCC-H---HHHHHHHTT-SCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCCch-H---HHHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999753 1 111112111 2357889999999999999888 8999999998531
Q ss_pred ----------------hh----hHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FL----DQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+. ..+.++..+++.+ .+++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e 168 (255)
T 2q2v_A 95 VEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGS-----TGKAAYVAAKHGVVGLTKVVGLE 168 (255)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCC-----CCchhHHHHHHHHHHHHHHHHHH
Confidence 11 3445566667788 788874 33 232111 1234677899988876653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 169 ~~~~gi~v~~v~Pg~v~t~ 187 (255)
T 2q2v_A 169 TATSNVTCNAICPGWVLTP 187 (255)
T ss_dssp TTTSSEEEEEEEESSBCCH
T ss_pred hcccCcEEEEEeeCCCcCc
Confidence 4899999999988653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.96 E-value=9.4e-10 Score=86.55 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=88.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~------- 69 (230)
|+++|+++ +|++++|+.. +.+.+. .+ .+ +++.+|++|.+++.++++ ++|+|||+++..
T Consensus 16 la~~l~~~--~V~~~~r~~~------~~~~~~~~~--~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 84 (207)
T 2yut_A 16 FARALKGH--DLLLSGRRAG------ALAELAREV--GA-RALPADLADELEAKALLEEAGPLDLLVHAVGKAGRASVRE 84 (207)
T ss_dssp HHHHTTTS--EEEEECSCHH------HHHHHHHHH--TC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC
T ss_pred HHHHHHhC--CEEEEECCHH------HHHHHHHhc--cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhh
Confidence 36777777 9999999642 222221 12 12 889999999999999998 899999999853
Q ss_pred ------------ChhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCC
Q 026978 70 ------------QFLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIP 128 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~ 128 (230)
++.+..++++++++.+ +++||. |+ .+... ..+...|..+|...+.+++. .|++
T Consensus 85 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~ 158 (207)
T 2yut_A 85 AGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQ-----VPGFAAYAAAKGALEAYLEAARKELLREGVH 158 (207)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHS-----STTBHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccC-----CCCcchHHHHHHHHHHHHHHHHHHHhhhCCE
Confidence 1346778889887777 788885 33 22211 11345677899988887654 5899
Q ss_pred EEEEeccccchh
Q 026978 129 YTFVSANLCGAY 140 (230)
Q Consensus 129 ~tilr~g~~~~~ 140 (230)
+++++||++...
T Consensus 159 v~~v~pg~v~t~ 170 (207)
T 2yut_A 159 LVLVRLPAVATG 170 (207)
T ss_dssp EEEECCCCBCSG
T ss_pred EEEEecCcccCC
Confidence 999999987653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-08 Score=83.32 Aligned_cols=128 Identities=14% Similarity=0.151 Sum_probs=88.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ..++.++.+|++|.+++.++++ |+|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 23 SALELARNGARLLLFSRNRE------KLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGP 96 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 47889999999999999742 22111 1221 1268899999999999999887 799999999853
Q ss_pred -------------------ChhhH----HHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQ----LEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~----~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+. +.++..+++.+ .+|+|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~ 170 (260)
T 2z1n_A 97 RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRP-----WQDLALSNIMRLPVIGVVRT 170 (260)
T ss_dssp CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTBHHHHHHTHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCC-----CCCCchhHHHHHHHHHHHHH
Confidence 12233 45566666777 788874 43 22211 11234677899888776553
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 171 la~e~~~~gi~v~~v~Pg~v~t~ 193 (260)
T 2z1n_A 171 LALELAPHGVTVNAVLPSLILTD 193 (260)
T ss_dssp HHHHHGGGTEEEEEEEECHHHHC
T ss_pred HHHHHhhhCeEEEEEEECCcccc
Confidence 4899999999987643
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.8e-09 Score=83.82 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=89.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+.... + +..+.+ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 28 ~a~~l~~~G~~V~~~~r~~~~~---~--~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~ 101 (265)
T 2o23_A 28 TAERLVGQGASAVLLDLPNSGG---E--AQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASK 101 (265)
T ss_dssp HHHHHHHTTCEEEEEECTTSSH---H--HHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcHhH---H--HHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCc
Confidence 4788999999999999985421 1 111223 3468999999999999999887 899999999852
Q ss_pred ---------------------ChhhHHHHHHHHHHh----------CCcceEec-cc-ccccCCCCCCCCchhHHHHHHH
Q 026978 70 ---------------------QFLDQLEIVHAIKVA----------GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKR 116 (230)
Q Consensus 70 ---------------------~~~~~~~ll~Aa~~a----------g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~ 116 (230)
++.+..++++++... + ..++|. |+ .+.... .+...|..+|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~sK~ 175 (265)
T 2o23_A 102 TYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEGQ-----VGQAAYSASKG 175 (265)
T ss_dssp SEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC-----TTCHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCCC-----CCCchhHHHHH
Confidence 123556777777664 5 677774 33 332111 12346778999
Q ss_pred HHHHHHHH-------cCCCEEEEeccccch
Q 026978 117 IVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 117 ~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.++.+.+. .|+.++.|+||++..
T Consensus 176 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 205 (265)
T 2o23_A 176 GIVGMTLPIARDLAPIGIRVMTIAPGLFGT 205 (265)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeccccC
Confidence 88776543 589999999998754
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-08 Score=83.82 Aligned_cols=128 Identities=12% Similarity=0.226 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhh---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEF---QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+.+ ..+ ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 37 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 37 IAQGLAEAGCSVVVASRNLE------EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 47889999999999999742 22111 112 12457889999999999888876 789999999863
Q ss_pred C-------------------hhhHHHHHHHH----HHhCCcceEec-cccc-ccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFG-CEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g-~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++ ++.+ .+++|. |+.+ ... +..+...|..+|..++.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~----~~~~~~~Y~asK~a~~~~~~~ 185 (267)
T 1vl8_A 111 RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV----TMPNISAYAASKGGVASLTKA 185 (267)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC----CSSSCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc----CCCCChhHHHHHHHHHHHHHH
Confidence 1 23445555555 4456 678874 4432 111 111234677999998877653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 186 la~e~~~~gi~v~~v~PG~v~T 207 (267)
T 1vl8_A 186 LAKEWGRYGIRVNVIAPGWYRT 207 (267)
T ss_dssp HHHHHGGGTCEEEEEEECCBCS
T ss_pred HHHHhcccCeEEEEEEeccCcc
Confidence 589999999998754
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-08 Score=83.22 Aligned_cols=130 Identities=10% Similarity=0.083 Sum_probs=89.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
|+++|+++|++|++++|+.. +.+.+ ..+.. .+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 32 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~ 105 (278)
T 2bgk_A 32 TAKLFVRYGAKVVIADIADD------HGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST 105 (278)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCS
T ss_pred HHHHHHHCCCEEEEEcCChh------HHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCC
Confidence 47889999999999999642 21111 12211 268999999999999998887 799999999853
Q ss_pred -------------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -------------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++.. .+ .+++|. |+....... + .+...|..+|..++.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--~-~~~~~Y~~sK~a~~~~~~~l 181 (278)
T 2bgk_A 106 TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG--E-GVSHVYTATKHAVLGLTTSL 181 (278)
T ss_dssp SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC--T-TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCC--C-CCCcchHHHHHHHHHHHHHH
Confidence 12355677777665 46 678874 332211110 0 0234678999998877654
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 182 a~e~~~~gi~v~~v~Pg~v~t~ 203 (278)
T 2bgk_A 182 CTELGEYGIRVNCVSPYIVASP 203 (278)
T ss_dssp HHHHGGGTEEEEEEEESCCSCC
T ss_pred HHHHhhcCcEEEEEEeceecch
Confidence 5899999999988654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-08 Score=81.92 Aligned_cols=128 Identities=9% Similarity=0.048 Sum_probs=87.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 29 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 29 TAVRLAAEGAKLSLVDVSSE------GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 47889999999999999742 21111 1121 3458889999999999988876 78999999985
Q ss_pred CC--------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 69 PQ--------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 69 ~~--------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
.. +.+ .+.++..+++.+ ..++|. |+ .+.... .+...|..+|..++.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~ 176 (267)
T 1iy8_A 103 EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI-----GNQSGYAAAKHGVVGLT 176 (267)
T ss_dssp CCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC-----SSBHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCC-----CCCccHHHHHHHHHHHH
Confidence 31 111 235566677777 788874 43 332111 12346779999888766
Q ss_pred HH-------cCCCEEEEeccccchh
Q 026978 123 EA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~~~ 140 (230)
+. .|+.++.|+||++...
T Consensus 177 ~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 177 RNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred HHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 53 5899999999987643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-08 Score=81.67 Aligned_cols=128 Identities=12% Similarity=0.138 Sum_probs=85.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. ++.+ .+... ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 96 (249)
T 2ew8_A 23 IAERFAVEGADIAIADLVPA-----PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 96 (249)
T ss_dssp HHHHHHHTTCEEEEEESSCC-----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCch-----hHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999752 1221 12222 2458889999999999888754 7999999998531
Q ss_pred -----------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..+++++ +++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~la~ 170 (249)
T 2ew8_A 97 PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI-----EAYTHYISTKAANIGFTRALAS 170 (249)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-----SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-----CCchhHHHHHHHHHHHHHHHHH
Confidence 2233344444 67777 788874 43 232111 1234677899998876654
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 171 e~~~~gi~v~~v~Pg~v~t~ 190 (249)
T 2ew8_A 171 DLGKDGITVNAIAPSLVRTA 190 (249)
T ss_dssp HHGGGTEEEEEEEECCC---
T ss_pred HHHhcCcEEEEEecCcCcCc
Confidence 5899999999987643
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=7.4e-09 Score=84.69 Aligned_cols=128 Identities=13% Similarity=0.182 Sum_probs=88.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHh--------cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSIL--------KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al--------~g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+. ...+. ..++.++.+|++|.+++.+++ .++|+|||+++..
T Consensus 25 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 25 IVEELASLGASVYTCSRNQK------ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCC
Confidence 47889999999999999743 2111 11222 235788999999999998887 4689999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ .+++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~ 172 (260)
T 2ae2_A 99 IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA-----VPYEAVYGATKGAMDQLTRC 172 (260)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC-----CCCcchHHHHHHHHHHHHHH
Confidence 123455666666 4567 788874 43 22211 11234677999998887654
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 173 la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 173 LAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp HHHHTGGGTEEEEEEEECSBCSH
T ss_pred HHHHHhhcCcEEEEEecCCCCCc
Confidence 4899999999987643
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-08 Score=80.56 Aligned_cols=127 Identities=13% Similarity=0.175 Sum_probs=87.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
++++|+++|++|++++|+.. +.+.+.. +..+++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~ 95 (244)
T 3d3w_A 23 TVQALHATGARVVAVSRTQA------DLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEV 95 (244)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHH-HcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhC
Confidence 47889999999999999742 2222211 12478889999999999999987 5799999998531
Q ss_pred ------------hhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------c
Q 026978 71 ------------FLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------A 125 (230)
Q Consensus 71 ------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~ 125 (230)
+.+..++++++.. .+..+++|. |+ .+... ..+...|..+|..++.+.+. .
T Consensus 96 ~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~ 170 (244)
T 3d3w_A 96 TKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----VTNHSVYCSTKGALDMLTKVMALELGPH 170 (244)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----CCCCchHHHHHHHHHHHHHHHHHHhccc
Confidence 2345555666544 331367774 33 22211 11345678999999887653 4
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
++.++.++||+...
T Consensus 171 ~i~v~~v~Pg~v~t 184 (244)
T 3d3w_A 171 KIRVNAVNPTVVMT 184 (244)
T ss_dssp TEEEEEEEECCBTT
T ss_pred CeEEEEEEeccccc
Confidence 89999999998764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.94 E-value=1e-08 Score=82.86 Aligned_cols=128 Identities=13% Similarity=0.223 Sum_probs=82.7
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++ .|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 ~a~~l~~~G~~V~~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 21 IAWKLGNMGANIVLNGSPAST------SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHHHTTCEEEEEECTTCS------HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---
T ss_pred HHHHHHHCCCEEEEEcCcCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 478899999999999 45432 1111 11221 2458899999999999988877 899999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ .+|+|. |+. +.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 168 (247)
T 2hq1_A 95 RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGN-----AGQANYAASKAGLIGFTKS 168 (247)
T ss_dssp ------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------CHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----CCCcHhHHHHHHHHHHHHH
Confidence 123444555544 4567 788875 432 22111 1234677999988877654
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||++...
T Consensus 169 la~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 169 IAKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHcCcEEEEEEEEEEecc
Confidence 4899999999987643
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-08 Score=84.92 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=92.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~------- 69 (230)
++++|+++|++|++++|+.. +.+.+ ..+ ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 32 ~a~~L~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~ 104 (291)
T 3rd5_A 32 TARELARRGATVIMAVRDTR------KGEAAARTM-AGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALT 104 (291)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCC
Confidence 47899999999999999743 22222 122 3468999999999999999988 569999999863
Q ss_pred ----------ChhhHHHHHHHHHHhCCcceEec-cc-cccc--C--C----CCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ----------QFLDQLEIVHAIKVAGNIKRFLP-SE-FGCE--E--D----KVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ----------~~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~--~--~----~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++.... .+|+|. |+ .+.. . . +..+..+...|..+|...+.+.+.
T Consensus 105 ~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~ 183 (291)
T 3rd5_A 105 VDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRL 183 (291)
T ss_dssp TTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 2457888999999888 788874 33 2211 0 0 011223445677999988766543
Q ss_pred --cC--CCEEEEeccccch
Q 026978 125 --AQ--IPYTFVSANLCGA 139 (230)
Q Consensus 125 --~g--l~~tilr~g~~~~ 139 (230)
.| +....|+||+...
T Consensus 184 ~~~g~~i~v~~v~PG~v~T 202 (291)
T 3rd5_A 184 TAAGSPLRALAAHPGYSHT 202 (291)
T ss_dssp HHTTCCCEEEEECCSGGGS
T ss_pred hhCCCCEEEEEeeCCCCcc
Confidence 45 8888999998753
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.5e-08 Score=80.82 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh---cCCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL---KEVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al---~g~D~Vi~~~~~~~------- 70 (230)
++++|+++|++|++++|+.. +.+.+..+ .++.++.+|++|.+++.+++ .++|+|||+++...
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 93 (246)
T 2ag5_A 22 AALAFAREGAKVIATDINES------KLQELEKY--PGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDC 93 (246)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHGGGGGS--TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHhc--cCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCCCCCcccC
Confidence 47889999999999999742 32222222 37899999999999988765 47899999998531
Q ss_pred ------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------c
Q 026978 71 ------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------A 125 (230)
Q Consensus 71 ------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~ 125 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... + .+...|..+|..++.+.+. .
T Consensus 94 ~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~-~~~~~Y~~sK~a~~~~~~~la~e~~~~ 168 (246)
T 2ag5_A 94 EEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG---V-VNRCVYSTTKAAVIGLTKSVAADFIQQ 168 (246)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---C-TTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCC---C-CCCccHHHHHHHHHHHHHHHHHHhhhc
Confidence 22344555554 3566 688874 33 222111 0 0234677999998877654 4
Q ss_pred CCCEEEEeccccchh
Q 026978 126 QIPYTFVSANLCGAY 140 (230)
Q Consensus 126 gl~~tilr~g~~~~~ 140 (230)
|+.++.|+||++...
T Consensus 169 gi~v~~v~Pg~v~t~ 183 (246)
T 2ag5_A 169 GIRCNCVCPGTVDTP 183 (246)
T ss_dssp TEEEEEEEESCEECH
T ss_pred CcEEEEEeeCcCcCc
Confidence 899999999988653
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.1e-08 Score=80.58 Aligned_cols=125 Identities=16% Similarity=0.228 Sum_probs=86.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|.+++|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 16 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 88 (248)
T 3asu_A 16 ITRRFIQQGHKVIATGRRQE------RLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGM 88 (248)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCC
Confidence 47889999999999999742 22222 123 2468899999999999998876 689999999853
Q ss_pred -----------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
|+.+..++++++. +.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la 162 (248)
T 3asu_A 89 EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP-----YAGGNVYGATKAFVRQFSLNLR 162 (248)
T ss_dssp SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccC-----CCCCchHHHHHHHHHHHHHHHH
Confidence 1223444555543 566 678874 33 33211 11234677999998877653
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+..+.|+||+..
T Consensus 163 ~e~~~~gi~v~~v~PG~v~ 181 (248)
T 3asu_A 163 TDLHGTAVRVTDIEPGLVG 181 (248)
T ss_dssp HHTTTSCCEEEEEEECSBC
T ss_pred HHhhhcCcEEEEEeccccc
Confidence 48999999999886
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.8e-08 Score=81.23 Aligned_cols=128 Identities=11% Similarity=0.112 Sum_probs=87.7
Q ss_pred CHHHHhhCCC-------eEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEE
Q 026978 1 MVKASVSSGH-------KTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVI 63 (230)
Q Consensus 1 lv~~Ll~~g~-------~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi 63 (230)
|+++|+++|+ +|++++|+.. +.+.+ ..+. ...++++.+|++|.+++.++++ ++|+||
T Consensus 18 la~~l~~~G~~~~~~~~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li 91 (244)
T 2bd0_A 18 IALEFARAARHHPDFEPVLVLSSRTAA------DLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLV 91 (244)
T ss_dssp HHHHHHHHTTTCTTCCEEEEEEESCHH------HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHhcCcccccceEEEEEeCCHH------HHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4788999999 9999999742 22211 1222 2357889999999999988876 799999
Q ss_pred EcCCCC-------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHH
Q 026978 64 STVAYP-------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 64 ~~~~~~-------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
|+++.. ++.+..++++++ ++.+ .+|+|. |+ .+... ..+...|..+|..+
T Consensus 92 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~Y~~sK~a~ 165 (244)
T 2bd0_A 92 NNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA-----FRHSSIYCMSKFGQ 165 (244)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTCHHHHHHHHHH
T ss_pred EcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCC-----CCCCchhHHHHHHH
Confidence 999853 123556666665 4456 688874 33 22211 11334677999988
Q ss_pred HHHHHH-------cCCCEEEEeccccchh
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~~ 140 (230)
+.+.+. .|+.++.|+||++...
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 194 (244)
T 2bd0_A 166 RGLVETMRLYARKCNVRITDVQPGAVYTP 194 (244)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred HHHHHHHHHHhhccCcEEEEEECCCccch
Confidence 876642 5899999999987653
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.4e-08 Score=81.79 Aligned_cols=128 Identities=15% Similarity=0.169 Sum_probs=86.8
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhhh-hhhc--CCCeEE-EEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEIH-KEFQ--GIGVTI-IEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~l-~~l~--~~gv~v-v~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|+++ .|+.. +.+.+ +.+. ...+.. +.+|++|.+++.++++ ++|+|||+++.
T Consensus 17 ~a~~l~~~G~~v~~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~ 90 (245)
T 2ph3_A 17 IALRLAEDGFALAIHYGQNRE------KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90 (245)
T ss_dssp HHHHHHTTTCEEEEEESSCHH------HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 478899999999998 67632 22211 1121 234566 8999999999888865 89999999985
Q ss_pred CC-------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 69 ~~-------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
.. +.+ .+.+++++++.+ ++|||. |+ .+.... .+...|..+|..++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~ 164 (245)
T 2ph3_A 91 TRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGN-----PGQANYVASKAGLIGFTR 164 (245)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----SSBHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCC-----CCCcchHHHHHHHHHHHH
Confidence 31 123 455666777788 889885 43 222111 123467789998877665
Q ss_pred H-------cCCCEEEEeccccchh
Q 026978 124 A-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~~ 140 (230)
. .|+.++.|+||++...
T Consensus 165 ~la~e~~~~gi~v~~v~Pg~v~t~ 188 (245)
T 2ph3_A 165 AVAKEYAQRGITVNAVAPGFIETE 188 (245)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHcCeEEEEEEEEeecCc
Confidence 3 4899999999988643
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.9e-08 Score=83.16 Aligned_cols=128 Identities=18% Similarity=0.242 Sum_probs=87.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 38 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~ 111 (277)
T 2rhc_B 38 IARRLGKEGLRVFVCARGEE------GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG 111 (277)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47889999999999999743 2111 11222 2357889999999999888876 789999999853
Q ss_pred ------------------ChhhHHHHHHHHH------HhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIK------VAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~------~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+..++++++. +.+ ..++|. |+. +... ..+...|..+|..++.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~ 185 (277)
T 2rhc_B 112 GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG-----VVHAAPYSASKHGVVGFTK 185 (277)
T ss_dssp CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccC-----CCCCccHHHHHHHHHHHHH
Confidence 1235566666654 346 678874 432 3211 1123467789998887665
Q ss_pred H-------cCCCEEEEeccccchh
Q 026978 124 A-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~~ 140 (230)
. .|+.++.|+||++...
T Consensus 186 ~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 186 ALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp HHHHHHTTTEEEEEEEEECSBCSH
T ss_pred HHHHHHHHhCcEEEEEecCcCcCc
Confidence 3 4799999999987643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-08 Score=82.33 Aligned_cols=131 Identities=21% Similarity=0.254 Sum_probs=88.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC----CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG----IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~----~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+.. +.+.+ ..+.. ..+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 48 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 48 VARALVQQGLKVVGCARTVG------NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECChH------HHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 47889999999999999742 22211 11211 247889999999999888876 79999999985
Q ss_pred CC-------------------hhh----HHHHHHHHHHhCCc--ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLD----QLEIVHAIKVAGNI--KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 69 ~~-------------------~~~----~~~ll~Aa~~ag~V--kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
.. +.+ .+++++++++.+ + +++|. |+.+.... .+..+...|..+|..++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~--~~~~~~~~Y~~sK~a~~~~~ 198 (279)
T 1xg5_A 122 ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRV--LPLSVTHFYSATKYAVTALT 198 (279)
T ss_dssp CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSC--CSCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhccc--CCCCCCchhHHHHHHHHHHH
Confidence 31 122 577888888887 6 68774 43222110 11123346778998877654
Q ss_pred H---------HcCCCEEEEeccccchh
Q 026978 123 E---------AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 123 ~---------~~gl~~tilr~g~~~~~ 140 (230)
+ ..++.++.|+||++...
T Consensus 199 ~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 199 EGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred HHHHHHHhhcCCCeEEEEEecCcccch
Confidence 3 35799999999987543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=83.03 Aligned_cols=138 Identities=10% Similarity=0.095 Sum_probs=88.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+..... +..+.+..-....++++.+|++|.+++.++++. +|+|||+++...
T Consensus 30 ~a~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~ 107 (265)
T 1h5q_A 30 FTRAVAAAGANVAVIYRSAADAV--EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP 107 (265)
T ss_dssp HHHHHHHTTEEEEEEESSCTTHH--HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSC
T ss_pred HHHHHHHCCCeEEEEeCcchhhH--HHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCc
Confidence 47889999999999999754211 111111111134688999999999998887763 899999998631
Q ss_pred ----------------hhhHHHHHHHHHH----hCCcceEec-cc-ccccCCC--CCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ----------------FLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDK--VRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~--~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++.. .+..+|||. |+ .+..... ..+..|...|..+|..++.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la 187 (265)
T 1h5q_A 108 ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187 (265)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence 2345666776644 331367774 33 2211110 11112345678999998877654
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 188 ~e~~~~gi~v~~v~Pg~v~t~ 208 (265)
T 1h5q_A 188 AEWASAGIRVNALSPGYVNTD 208 (265)
T ss_dssp HHHGGGTEEEEEEEECSBCCG
T ss_pred HHHHhcCcEEEEEecCccccc
Confidence 4899999999988654
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.8e-08 Score=82.17 Aligned_cols=131 Identities=14% Similarity=0.162 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|++++|+.. ++.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 23 MAIRFATEKAKVVVNYRSKE-----DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCh-----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999321 122111 1221 2357889999999999988877 8999999998531
Q ss_pred -------------------hhhHHHHHHHHH----HhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLEIVHAIK----VAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++. +.+...|+|. |+..... +..+...|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~la 173 (261)
T 1gee_A 98 PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----PWPLFVHYAASKGGMKLMTETLA 173 (261)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----CCCCccHHHHHHHHHHHHHHHHH
Confidence 223455555544 3331357774 4432211 112345677999888776543
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 174 ~e~~~~gi~v~~v~Pg~v~t~ 194 (261)
T 1gee_A 174 LEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp HHHGGGTCEEEEEEECSBCSG
T ss_pred HHhcccCeEEEEEeeCCcCCc
Confidence 4899999999987653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.2e-08 Score=81.85 Aligned_cols=127 Identities=13% Similarity=0.174 Sum_probs=87.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|.+++|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 24 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~ 96 (259)
T 4e6p_A 24 FAEAYVREGATVAIADIDIE------RARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLA 96 (259)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 47899999999999999743 22221 223 3568899999999999998887 899999999863
Q ss_pred ----------------ChhhHHHHHHHHHHh----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ----------------QFLDQLEIVHAIKVA----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++... +.-.++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~ 171 (259)
T 4e6p_A 97 PIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----EALVAIYCATKAAVISLTQSAGL 171 (259)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----CCCChHHHHHHHHHHHHHHHHHH
Confidence 133556677766543 21136663 33 33211 11234677999998877654
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 172 e~~~~gi~vn~v~PG~v~t 190 (259)
T 4e6p_A 172 DLIKHRINVNAIAPGVVDG 190 (259)
T ss_dssp HHGGGTEEEEEEEECCBCS
T ss_pred HhhhcCCEEEEEEECCCcc
Confidence 489999999998764
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-08 Score=82.48 Aligned_cols=131 Identities=12% Similarity=0.142 Sum_probs=86.1
Q ss_pred CHHHHhhCCCeEEEEEcC-CCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC-C
Q 026978 1 MVKASVSSGHKTFVYARP-VTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY-P 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~-~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~-~ 69 (230)
|+++|+++|++|++++|+ .... ++ ....+. ..+++++.+|++|.+++.++++ ++|+|||+++. .
T Consensus 23 ~a~~l~~~G~~V~~~~r~~~~~~---~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~ 97 (258)
T 3afn_B 23 TARLFARAGAKVGLHGRKAPANI---DE--TIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLV 97 (258)
T ss_dssp HHHHHHHTTCEEEEEESSCCTTH---HH--HHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEECCCchhhH---HH--HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence 478899999999999998 3321 11 111221 2358899999999999999888 89999999985 2
Q ss_pred -------------------ChhhHHHHHHHHH----H----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIK----V----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~----~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
++.+..++++++. + .+...++|. |.++.... ..+...|..+|..++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~~Y~~sK~a~~~ 173 (258)
T 3afn_B 98 GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG----GPGAGLYGAAKAFLHN 173 (258)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC----CTTCHHHHHHHHHHHH
T ss_pred CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC----CCCchHHHHHHHHHHH
Confidence 1224444555442 2 211256664 33432201 1134567899999887
Q ss_pred HHHH-------cCCCEEEEeccccchh
Q 026978 121 AIEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~~ 140 (230)
+.+. .|+.+++++||++...
T Consensus 174 ~~~~~~~e~~~~gi~v~~v~Pg~v~t~ 200 (258)
T 3afn_B 174 VHKNWVDFHTKDGVRFNIVSPGTVDTA 200 (258)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSG
T ss_pred HHHHHHHhhcccCeEEEEEeCCCcccc
Confidence 7653 4899999999988654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.89 E-value=6.8e-08 Score=77.76 Aligned_cols=132 Identities=13% Similarity=0.110 Sum_probs=86.8
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~ 69 (230)
|+++|+++| ++|++++|+... .+.+..+...+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 19 la~~l~~~g~~~~V~~~~r~~~~------~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~ 92 (250)
T 1yo6_A 19 LVQQLVKDKNIRHIIATARDVEK------ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL 92 (250)
T ss_dssp HHHHHHTCTTCCEEEEEESSGGG------CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCC
T ss_pred HHHHHHhcCCCcEEEEEecCHHH------HHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCccc
Confidence 478899999 999999997542 222223223478999999999999998887 899999999753
Q ss_pred C--------------------hhhHHHHHHHHHH----h------CC----cceEec-cc-ccccCC--CCCCCCchhHH
Q 026978 70 Q--------------------FLDQLEIVHAIKV----A------GN----IKRFLP-SE-FGCEED--KVRPLPPFEAY 111 (230)
Q Consensus 70 ~--------------------~~~~~~ll~Aa~~----a------g~----Vkr~v~-S~-~g~~~~--~~~~~~p~~~~ 111 (230)
. +.+..++++++.. . +. ..+||. |+ .+.... ...+..+...|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y 172 (250)
T 1yo6_A 93 LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY 172 (250)
T ss_dssp CCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHH
T ss_pred CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHH
Confidence 2 2244555555543 2 21 357764 33 332111 00111234567
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 112 LEKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 112 ~~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
..+|...+.+.+. .|+..+.|+||++.
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 206 (250)
T 1yo6_A 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEcCCcee
Confidence 7999998877653 38999999998864
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-08 Score=82.29 Aligned_cols=129 Identities=13% Similarity=0.115 Sum_probs=88.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC---CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG---IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~---~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+. ...+.. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 26 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 99 (262)
T 3pk0_A 26 IATVFARAGANVAVAGRSTA------DIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF 99 (262)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 47889999999999999743 2111 112222 468899999999999988876 899999999864
Q ss_pred C-------------------hhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++.. .+ ..++|. |+ .+... +..+...|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~----~~~~~~~Y~asK~a~~~l~~~ 174 (262)
T 3pk0_A 100 PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPIT----GYPGWSHYGATKAAQLGFMRT 174 (262)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTB----CCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC----CCCCChhhHHHHHHHHHHHHH
Confidence 1 2345555555544 47 678774 33 33211 111234677999998877654
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 175 la~e~~~~gi~vn~v~PG~v~t~ 197 (262)
T 3pk0_A 175 AAIELAPHKITVNAIMPGNIMTE 197 (262)
T ss_dssp HHHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHHHhhCcEEEEEEeCcCcCc
Confidence 5899999999987643
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=4.2e-08 Score=80.79 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=90.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.+++|+..... + ....+ ..++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 27 ia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 100 (271)
T 3tzq_B 27 TSRVLARAGARVVLADLPETDLA---G--AAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPAD 100 (271)
T ss_dssp HHHHHHHTTCEEEEEECTTSCHH---H--HHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTC
T ss_pred HHHHHHHCCCEEEEEcCCHHHHH---H--HHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47899999999999999864321 1 11223 4578899999999999998887 889999999854
Q ss_pred -----------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -----------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
|+.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la 174 (271)
T 3tzq_B 101 MLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAA-----YDMSTAYACTKAAIETLTRYVA 174 (271)
T ss_dssp CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSB-----CSSCHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCC-----CCCChHHHHHHHHHHHHHHHHH
Confidence 123556677776 6677 678874 33 22211 11335678999998876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 175 ~e~~~~gi~vn~v~PG~v~t 194 (271)
T 3tzq_B 175 TQYGRHGVRCNAIAPGLVRT 194 (271)
T ss_dssp HHHGGGTEEEEEEEECCBCC
T ss_pred HHHhhcCEEEEEEEeCCCcC
Confidence 689999999998764
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-08 Score=83.82 Aligned_cols=129 Identities=15% Similarity=0.175 Sum_probs=89.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
|+++|+++|++|++++|... ++.+.+ ..++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 37 la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 111 (274)
T 1ja9_A 37 IAIELGRRGASVVVNYGSSS-----KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV 111 (274)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCch-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999421 122111 1222 3457889999999999998887 899999999853
Q ss_pred ------------------ChhhHHHHHHHHHHh---CCcceEec-cccccc-CCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ------------------QFLDQLEIVHAIKVA---GNIKRFLP-SEFGCE-EDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a---g~Vkr~v~-S~~g~~-~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++.+. + +|||. |+.+.. .. ..+...|..+|..++.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~----~~~~~~Y~~sK~a~~~~~~~~~ 185 (274)
T 1ja9_A 112 WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTG----IPNHALYAGSKAAVEGFCRAFA 185 (274)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCS----CCSCHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CEEEEEcChHhccCC----CCCCchHHHHHHHHHHHHHHHH
Confidence 134667788888775 3 46764 432221 11 11234677999999887654
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.++.++.++||++...
T Consensus 186 ~e~~~~gi~v~~v~Pg~v~t~ 206 (274)
T 1ja9_A 186 VDCGAKGVTVNCIAPGGVKTD 206 (274)
T ss_dssp HHHGGGTCEEEEEEECCBSSH
T ss_pred HHhhhcCeEEEEEeeCccccc
Confidence 4899999999988654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=83.12 Aligned_cols=129 Identities=15% Similarity=0.121 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC---------CCeEEEEecCCCHHHHHHHhcCC--------CEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG---------IGVTIIEGELDEHKKIVSILKEV--------DVV 62 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~---------~gv~vv~gD~~d~~~L~~al~g~--------D~V 62 (230)
|+++|+++|++|++++|+.. +.+.+ ..+.. .++.++.+|++|.+++.++++.+ |+|
T Consensus 23 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~v 96 (264)
T 2pd6_A 23 VSVRLAGEGATVAACDLDRA------AAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVV 96 (264)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEE
T ss_pred HHHHHHHCCCEEEEEeCChH------HHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 47889999999999999743 21111 12211 35789999999999998888754 999
Q ss_pred EEcCCCCC-------------------hhhHHHHHHHHHHh----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHH
Q 026978 63 ISTVAYPQ-------------------FLDQLEIVHAIKVA----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 63 i~~~~~~~-------------------~~~~~~ll~Aa~~a----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
||+++... +.+..++++++... +...|||. |+ .+.... .+...|..+|..
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a 171 (264)
T 2pd6_A 97 VSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----VGQTNYAASKAG 171 (264)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----TTBHHHHHHHHH
T ss_pred EECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----CCChhhHHHHHH
Confidence 99998531 23566777776553 31257764 33 332211 133567799998
Q ss_pred HHHHHHH-------cCCCEEEEeccccchh
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~~~ 140 (230)
++.+.+. .|++++.++||++...
T Consensus 172 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 201 (264)
T 2pd6_A 172 VIGLTQTAARELGRHGIRCNSVLPGFIATP 201 (264)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeeccccc
Confidence 8776643 5899999999987653
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.9e-08 Score=82.18 Aligned_cols=128 Identities=17% Similarity=0.242 Sum_probs=87.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 30 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~ 103 (260)
T 2zat_A 30 IARRLAQDGAHVVVSSRKQE------NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNP 103 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 2111 11222 2357889999999999888776 899999999852
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ .+++|. |+.+... +..+...|..+|..++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 104 FFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYH----PFPNLGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS----CCTTBHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcC----CCCCchhHHHHHHHHHHHHHHH
Confidence 123444455554 4667 788874 4322211 111334677899998877654
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 179 a~e~~~~gi~v~~v~Pg~v~t 199 (260)
T 2zat_A 179 AVELAPRNIRVNCLAPGLIKT 199 (260)
T ss_dssp HHHHGGGTEEEEEEEECSBCS
T ss_pred HHHhcccCeEEEEEEECcccC
Confidence 489999999998764
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.9e-08 Score=81.64 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=88.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +. +.+...++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 32 ia~~l~~~G~~V~~~~r~~~------~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 102 (266)
T 3p19_A 32 IARRFSEEGHPLLLLARRVE------RL---KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ 102 (266)
T ss_dssp HHHHHHHTTCCEEEEESCHH------HH---HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HH---HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCC
Confidence 47889999999999999732 22 23334578999999999999988877 7899999998641
Q ss_pred ----------------hhhHHHH----HHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEI----VHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~l----l~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++ +..+++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e 176 (266)
T 3p19_A 103 IDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT-----FPDHAAYCGTKFAVHAISENVREE 176 (266)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC-----CCCCchHHHHHHHHHHHHHHHHHH
Confidence 2344444 44455677 688874 33 33211 11234677899988866543
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||+....
T Consensus 177 ~~~~gi~vn~v~PG~v~T~ 195 (266)
T 3p19_A 177 VAASNVRVMTIAPSAVKTE 195 (266)
T ss_dssp HGGGTCEEEEEEECSBSSS
T ss_pred hcccCcEEEEEeeCccccc
Confidence 5899999999987643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.87 E-value=8.7e-09 Score=83.09 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=86.4
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
|+++|+++|++|+++ .|+.. +.+.+ +.++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 17 la~~l~~~G~~v~~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 90 (244)
T 1edo_A 17 IALSLGKAGCKVLVNYARSAK------AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT 90 (244)
T ss_dssp HHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 478999999999995 67532 22111 1121 2457889999999999998887 789999999853
Q ss_pred C-------------------hhhHHHHHHHHHH----hCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAIKV----AGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++.+ .+ .+|||. |+. +.... .+...|..+|...+.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 164 (244)
T 1edo_A 91 RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN-----IGQANYAAAKAGVIGFSKT 164 (244)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCC-----CCCccchhhHHHHHHHHHH
Confidence 1 2355566666654 56 788874 432 22111 1234677899887766543
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.++||++...
T Consensus 165 la~e~~~~gi~v~~v~Pg~v~t~ 187 (244)
T 1edo_A 165 AAREGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp HHHHHHTTTEEEEEEEECSBCSH
T ss_pred HHHHhhhcCCEEEEEeeCccccc
Confidence 5899999999988653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.86 E-value=3e-08 Score=80.38 Aligned_cols=128 Identities=12% Similarity=0.205 Sum_probs=86.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|++++|.. +++.+.+ +.++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 20 ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~ 94 (246)
T 2uvd_A 20 IAIDLAKQGANVVVNYAGN-----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK 94 (246)
T ss_dssp HHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 4788999999999999932 1122211 1221 2358889999999999988877 7999999998531
Q ss_pred -------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+ .+.++..+++.+ .+|+|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~l 168 (246)
T 2uvd_A 95 DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGN-----PGQANYVAAKAGVIGLTKTS 168 (246)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTBHHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCC-----CCCchHHHHHHHHHHHHHHH
Confidence 123 334455556677 788874 43 232111 1234677899888766542
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 169 a~e~~~~gi~v~~v~Pg~v~t 189 (246)
T 2uvd_A 169 AKELASRNITVNAIAPGFIAT 189 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGG
T ss_pred HHHhhhcCeEEEEEEeccccC
Confidence 589999999998754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.5e-08 Score=82.16 Aligned_cols=128 Identities=13% Similarity=0.211 Sum_probs=87.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHh--------cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSIL--------KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al--------~g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.+++ .++|+|||+++..
T Consensus 37 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 37 IVEELAGLGARVYTCSRNEK------ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCC
Confidence 47889999999999999742 2211 11221 245888999999999988877 4689999999863
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~ 184 (273)
T 1ae1_A 111 IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA-----LPSVSLYSASKGAINQMTKS 184 (273)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCC-----CCCcchhHHHHHHHHHHHHH
Confidence 123455566665 4566 688874 33 33211 11234677999988876653
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 185 la~e~~~~gi~v~~v~Pg~v~t~ 207 (273)
T 1ae1_A 185 LACEWAKDNIRVNSVAPGVILTP 207 (273)
T ss_dssp HHHHHGGGTEEEEEEEECSBC--
T ss_pred HHHHHhhcCcEEEEEEeCCCcCc
Confidence 4899999999987643
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.5e-08 Score=82.38 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=89.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC---CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~---~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+..... + ....+.. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 57 ia~~la~~G~~V~~~~r~~~~~~---~--~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 57 IATVFARAGANVAVAARSPRELS---S--VTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP 131 (293)
T ss_dssp HHHHHHHTTCEEEEEESSGGGGH---H--HHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH---H--HHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47899999999999999854321 1 1122322 358899999999998877765 679999999864
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+.... ..+...|..+|..++.+.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~----~~~~~~Y~asKaa~~~l~~~l 206 (293)
T 3rih_A 132 EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG----YPGWSHYGASKAAQLGFMRTA 206 (293)
T ss_dssp CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBB----CTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCC----CCCCHHHHHHHHHHHHHHHHH
Confidence 133566677766 5667 678874 33 332111 11234677999988876653
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 207 a~e~~~~gI~vn~v~PG~v~t~ 228 (293)
T 3rih_A 207 AIELAPRGVTVNAILPGNILTE 228 (293)
T ss_dssp HHHHGGGTCEEEEEEECSBCCH
T ss_pred HHHHhhhCeEEEEEecCCCcCc
Confidence 5899999999988653
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.86 E-value=6.5e-08 Score=79.37 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=84.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+... ..++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 89 (264)
T 2dtx_A 24 IAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGK 89 (264)
T ss_dssp HHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478899999999999997431 2457899999999999988877 799999999853
Q ss_pred ---------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----c
Q 026978 70 ---------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
++.+..++++++.. .+ ..++|. |+..... +..+...|..+|..++.+.+. .
T Consensus 90 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~ 164 (264)
T 2dtx_A 90 IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASI----ITKNASAYVTSKHAVIGLTKSIALDY 164 (264)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTS----CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhcc----CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 12345555665543 45 678874 4322211 111335677999998877654 1
Q ss_pred C--CCEEEEeccccch
Q 026978 126 Q--IPYTFVSANLCGA 139 (230)
Q Consensus 126 g--l~~tilr~g~~~~ 139 (230)
+ +.++.|+||++..
T Consensus 165 ~~~i~vn~v~PG~v~t 180 (264)
T 2dtx_A 165 APLLRCNAVCPATIDT 180 (264)
T ss_dssp TTTSEEEEEEECSBCS
T ss_pred cCCcEEEEEEeCCCcC
Confidence 1 8899999998754
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=4.4e-08 Score=80.06 Aligned_cols=129 Identities=13% Similarity=0.179 Sum_probs=86.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+... +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 20 ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 20 IATALAAQGADIVLNGFGDAA-----EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ 94 (260)
T ss_dssp HHHHHHHTTCEEEEECCSCHH-----HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHcCCEEEEEeCCcch-----HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 478899999999999997431 02111 1221 2458889999999999988876 789999999853
Q ss_pred C-------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~ 168 (260)
T 1x1t_A 95 HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS-----ANKSAYVAAKHGVVGFTKV 168 (260)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCC-----CCCchHHHHHHHHHHHHHH
Confidence 1 22344455544 4567 688874 33 232111 1234677899988876653
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 169 la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T 1x1t_A 169 TALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp HHHHHTTTTEEEEEEEECCBCC-
T ss_pred HHHHhccCCEEEEEEeecCccCc
Confidence 4899999999987643
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=3.9e-08 Score=79.77 Aligned_cols=125 Identities=7% Similarity=0.016 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +.+.+. +..|+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~ 92 (245)
T 1uls_A 21 TLELFAKEGARLVACDIEEG------PLREAA--EAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF 92 (245)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHH--HTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHH--HHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999732 222221 12268899999999999888776 4899999998531
Q ss_pred ----------------hhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++.. .+ ..++|. |+.+. ... .....|..+|..++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~-~~~----~~~~~Y~asK~a~~~~~~~la~e~ 166 (245)
T 1uls_A 93 HWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVY-LGN----LGQANYAASMAGVVGLTRTLALEL 166 (245)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGG-GCC----TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccchh-cCC----CCchhHHHHHHHHHHHHHHHHHHH
Confidence 2345556665544 46 678874 44331 111 1234677899887766543
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 167 ~~~gi~v~~v~PG~v~t 183 (245)
T 1uls_A 167 GRWGIRVNTLAPGFIET 183 (245)
T ss_dssp GGGTEEEEEEEECSBCC
T ss_pred hHhCeEEEEEEeCcCcC
Confidence 589999999998754
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.5e-08 Score=82.18 Aligned_cols=129 Identities=14% Similarity=0.192 Sum_probs=89.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|... ++.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 20 ia~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 94 (246)
T 3osu_A 20 IALQLAEEGYNVAVNYAGSK-----EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITR 94 (246)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47899999999999988542 122211 1222 2457889999999999988877 789999999864
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
|+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 95 DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGN-----PGQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC-----CCChHHHHHHHHHHHHHHHH
Confidence 134567777777 6667 678774 33 332111 1234678999988876653
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 169 a~e~~~~gi~vn~v~PG~v~t~ 190 (246)
T 3osu_A 169 ARELASRGITVNAVAPGFIVSD 190 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGG
T ss_pred HHHhcccCeEEEEEEECCCcCC
Confidence 5899999999987643
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=6.6e-08 Score=78.84 Aligned_cols=125 Identities=14% Similarity=0.168 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... .+..+.+. . .++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 92 (256)
T 2d1y_A 22 IAQAFAREGALVALCDLRPEG------KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGS 92 (256)
T ss_dssp HHHHHHHTTCEEEEEESSTTH------HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCChhH------HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478899999999999997532 11122332 3 789999999998888776 6899999998531
Q ss_pred ----------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++. +.+ .+++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e 166 (256)
T 2d1y_A 93 ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE-----QENAAYNASKGGLVNLTRSLALD 166 (256)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC-----TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC-----CCChhHHHHHHHHHHHHHHHHHH
Confidence 234555666553 456 688874 43 332111 1234677999998877653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 167 ~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 167 LAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp HGGGTEEEEEEEECSBCCH
T ss_pred HhhcCeEEEEEeeCCccCc
Confidence 5899999999987643
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-08 Score=80.24 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=85.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhh---c--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEF---Q--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l---~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|++++|+.. +.+.+ +.+ . ...+.++.+|++|.+++.++++ ++|+|||+++
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 95 (278)
T 1spx_A 22 TAVLFAREGAKVTITGRHAE------RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 47889999999999999742 22211 112 1 1357889999999999999887 8999999998
Q ss_pred CC------------C-----------hhhHHHHHHHHHH----hCCcceEec-ccccc-cCCCCCCCCchhHHHHHHHHH
Q 026978 68 YP------------Q-----------FLDQLEIVHAIKV----AGNIKRFLP-SEFGC-EEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 68 ~~------------~-----------~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~-~~~~~~~~~p~~~~~~~K~~~ 118 (230)
.. . +.+..++++++.. .+ +++|. |+... .. +..+...|..+|..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~----~~~~~~~Y~~sK~a~ 169 (278)
T 1spx_A 96 AAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLH----ATPDFPYYSIAKAAI 169 (278)
T ss_dssp -------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSS----CCTTSHHHHHHHHHH
T ss_pred CCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEeccccccc----CCCCccHHHHHHHHH
Confidence 53 1 1234455555544 34 57764 43221 11 111234677899998
Q ss_pred HHHHHH-------cCCCEEEEeccccchh
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~~ 140 (230)
+.+.+. .|+.++.|+||++...
T Consensus 170 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 198 (278)
T 1spx_A 170 DQYTRNTAIDLIQHGIRVNSISPGLVATG 198 (278)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred HHHHHHHHHHHHhcCcEEEEEecCcccCc
Confidence 877653 5899999999988643
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.2e-08 Score=80.79 Aligned_cols=129 Identities=14% Similarity=0.201 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|++++|+.... +.+. .+.++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 18 ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 93 (258)
T 3a28_C 18 ISEKLAADGFDIAVADLPQQEE----QAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ 93 (258)
T ss_dssp HHHHHHHHTCEEEEEECGGGHH----HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcchH----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4788999999999999974320 0111 11222 2358889999999999888876 7999999998531
Q ss_pred -------------------hhhHHHHHHHHH----HhCCc-ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 -------------------FLDQLEIVHAIK----VAGNI-KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~----~ag~V-kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++. +.+ . .++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~ 167 (258)
T 3a28_C 94 IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQG-----FPILSAYSTTKFAVRGLTQA 167 (258)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccC-----CCCchhHHHHHHHHHHHHHH
Confidence 224445555554 456 6 78874 43 23211 11234677899988876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 168 la~e~~~~gi~vn~v~PG~v~t 189 (258)
T 3a28_C 168 AAQELAPKGHTVNAYAPGIVGT 189 (258)
T ss_dssp HHHHHGGGTCEEEEEEECCBCS
T ss_pred HHHHHHhhCeEEEEEECCccCC
Confidence 589999999998754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=8.2e-09 Score=86.04 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=87.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc---CCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ---GIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~---~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.++++. +|+|||+++..
T Consensus 42 la~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 42 MTTLLSSLGAQCVIASRKMD------VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN 115 (302)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 47889999999999999743 2111 11221 34689999999999999888774 49999999853
Q ss_pred -------------------ChhhHHHHHHHHHH-----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIKV-----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~-----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+..++++++.. .+ ..++|. |.++.... .+...|..+|..++.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~ 189 (302)
T 1w6u_A 116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-GAAFLSITTIYAETGS-----GFVVPSASAKAGVEAMSK 189 (302)
T ss_dssp CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCEEEEEcccccccCC-----CCcchhHHHHHHHHHHHH
Confidence 12345566666543 34 567774 33332211 133567899999887765
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+.++.|+||++..
T Consensus 190 ~la~~~~~~gi~v~~v~Pg~v~t 212 (302)
T 1w6u_A 190 SLAAEWGKYGMRFNVIQPGPIKT 212 (302)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHhhhcCcEEEEEeeccCCC
Confidence 3 589999999998864
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.8e-08 Score=81.01 Aligned_cols=121 Identities=14% Similarity=0.097 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~----- 69 (230)
|+++|+++|++|++++|+.. . ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 la~~l~~~G~~V~~~~r~~~-~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~ 82 (242)
T 1uay_A 18 AALALKARGYRVVVLDLRRE-G--------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 82 (242)
T ss_dssp HHHHHHHHTCEEEEEESSCC-S--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred HHHHHHHCCCEEEEEccCcc-c--------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccc
Confidence 47889999999999999753 1 245889999999999999987 889999999853
Q ss_pred ------------------ChhhHHHHHHHHHHhC---------CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIKVAG---------NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRR 120 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag---------~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~ 120 (230)
++.+..++++++.... ...+||. |+ .+.... .+...|..+|...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~~ 157 (242)
T 1uay_A 83 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-----IGQAAYAASKGGVVA 157 (242)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----CCCchhhHHHHHHHH
Confidence 1235677788776642 0127764 33 222111 123467789988877
Q ss_pred HHHH-------cCCCEEEEeccccchhh
Q 026978 121 AIEA-------AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 121 ~l~~-------~gl~~tilr~g~~~~~~ 141 (230)
+.+. .|+.+++|+||++....
T Consensus 158 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 158 LTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred HHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 6643 48999999999887543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.2e-08 Score=81.17 Aligned_cols=128 Identities=12% Similarity=0.114 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.+++|+.. +.+.+..-....+..+.+|++|.+++.++++ ++|+|||+++..
T Consensus 43 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 116 (277)
T 4dqx_A 43 TAELFAKNGAYVVVADVNED------AAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGN 116 (277)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 47899999999999999742 2222221113568899999999999888877 789999999853
Q ss_pred ---------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++ ++.+ ..++|. |+..... +..+...|..+|..++.+.+.
T Consensus 117 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----~~~~~~~Y~asKaa~~~l~~~la~e~ 191 (277)
T 4dqx_A 117 VVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATS----AIADRTAYVASKGAISSLTRAMAMDH 191 (277)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTS----CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCc----CCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 123445555555 4455 567774 3322111 111235677999988876653
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 192 ~~~gi~vn~v~PG~v~T 208 (277)
T 4dqx_A 192 AKEGIRVNAVAPGTIDS 208 (277)
T ss_dssp GGGTEEEEEEEECSBCC
T ss_pred hhcCeEEEEEeeCcCcC
Confidence 589999999998754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=3.1e-08 Score=80.93 Aligned_cols=133 Identities=11% Similarity=0.132 Sum_probs=90.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-c--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-Q--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY-- 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~-- 68 (230)
++++|+++|++|+++.|+... ..+.+... . ...+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 23 ~a~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~ 97 (264)
T 3i4f_A 23 VTEKLLAKGYSVTVTYHSDTT-----AMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYV 97 (264)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCChH-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccc
Confidence 478999999999999887532 11111111 1 2468999999999999998887 88999999993
Q ss_pred C-------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 69 P-------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 69 ~-------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. ++.+..++++++ ++.+ ..++|. |+.+..... +..+...|..+|...+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~--~~~~~~~Y~asKaa~~~~~~~ 174 (264)
T 3i4f_A 98 FERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAP--GWIYRSAFAAAKVGLVSLTKT 174 (264)
T ss_dssp CSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCC--CCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccC--CCCCCchhHHHHHHHHHHHHH
Confidence 1 123566677766 6777 678874 333221111 111334677999988876653
Q ss_pred -------cCCCEEEEeccccchhh
Q 026978 125 -------AQIPYTFVSANLCGAYF 141 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~~ 141 (230)
.|+..+.|+||+.....
T Consensus 175 la~e~~~~gi~v~~v~PG~v~t~~ 198 (264)
T 3i4f_A 175 VAYEEAEYGITANMVCPGDIIGEM 198 (264)
T ss_dssp HHHHHGGGTEEEEEEEECCCCGGG
T ss_pred HHHHhhhcCcEEEEEccCCccCcc
Confidence 58999999999886543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-08 Score=90.14 Aligned_cols=131 Identities=19% Similarity=0.273 Sum_probs=91.0
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-----
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ----- 70 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~----- 70 (230)
|++.|+++|+ .|.++.|+.... +.-.+..+.+...| ++++.+|++|.+++.+++++ +|+|||+++...
T Consensus 275 lA~~La~~G~~~vvl~~R~~~~~--~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~ 352 (511)
T 2z5l_A 275 LARRLAAEGAERLVLTSRRGPEA--PGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHTAGILDDAVID 352 (511)
T ss_dssp HHHHHHHTTCSEEEEEESSGGGS--TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGG
T ss_pred HHHHHHhCCCcEEEEEecCCccc--HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccCCcccc
Confidence 4688999999 588889975321 10111122343334 77899999999999999986 999999998641
Q ss_pred --------------hhhHHHHHHHHHHh-CCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHH---HcCCCEE
Q 026978 71 --------------FLDQLEIVHAIKVA-GNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIE---AAQIPYT 130 (230)
Q Consensus 71 --------------~~~~~~ll~Aa~~a-g~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~---~~gl~~t 130 (230)
+.+..+|.++++.. + .++||. |+. +.... .....|..+|...+.+.+ ..|++++
T Consensus 353 ~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~-----~g~~~YaaaKa~ld~la~~~~~~gi~v~ 426 (511)
T 2z5l_A 353 TLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGN-----AGQGAYAAANAALDALAERRRAAGLPAT 426 (511)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCC-----TTBHHHHHHHHHHHHHHHHHHTTTCCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 34667888888766 6 788874 432 22111 123467789988887665 4799999
Q ss_pred EEeccccch
Q 026978 131 FVSANLCGA 139 (230)
Q Consensus 131 ilr~g~~~~ 139 (230)
+|+||++.+
T Consensus 427 sv~pG~~~~ 435 (511)
T 2z5l_A 427 SVAWGLWGG 435 (511)
T ss_dssp EEEECCBCS
T ss_pred EEECCcccC
Confidence 999998843
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.83 E-value=6.5e-08 Score=78.32 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------ 70 (230)
++++|+++|++|++++|+.. +.+.+. .+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 30 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~ 102 (249)
T 3f9i_A 30 IARLLHKLGSKVIISGSNEE------KLKSLGNAL-KDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIR 102 (249)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC---------
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHh-ccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCcccc
Confidence 47889999999999999742 322222 23 3578999999999999998887 6899999998531
Q ss_pred -------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 71 -------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 71 -------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
+.+..++++++ ++.+ ..|+|. |+ .+.... .+...|..+|...+.+.+.
T Consensus 103 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~ 176 (249)
T 3f9i_A 103 MKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGN-----PGQANYCASKAGLIGMTKSLSYEVAT 176 (249)
T ss_dssp ----CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CC-----SCSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCC-----CCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 23455555554 4456 578774 33 332111 1234677999988876653
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.|+..+.++||+...
T Consensus 177 ~gi~v~~v~PG~v~t 191 (249)
T 3f9i_A 177 RGITVNAVAPGFIKS 191 (249)
T ss_dssp GTEEEEEEEECCBC-
T ss_pred cCcEEEEEecCcccc
Confidence 589999999998754
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-08 Score=78.62 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=82.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC---CCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE---VDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g---~D~Vi~~~~~~-------- 69 (230)
|+++|+ +|++|++++|+.. .+.+|++|.+++.+++++ +|+|||+++..
T Consensus 19 ~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~ 77 (202)
T 3d7l_A 19 VKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTEL 77 (202)
T ss_dssp HHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGC
T ss_pred HHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence 467888 9999999998621 467899999999998886 79999999853
Q ss_pred -----------ChhhHHHHHHHHHHh---CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------cCC
Q 026978 70 -----------QFLDQLEIVHAIKVA---GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------AQI 127 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~a---g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------~gl 127 (230)
++.+..++++++.+. + +++|. |+ .+.. +..+...|..+|..++.+.+. .|+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~-----~~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi 150 (202)
T 3d7l_A 78 TPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMED-----PIVQGASAAMANGAVTAFAKSAAIEMPRGI 150 (202)
T ss_dssp CHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTS-----CCTTCHHHHHHHHHHHHHHHHHTTSCSTTC
T ss_pred CHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcC-----CCCccHHHHHHHHHHHHHHHHHHHHccCCe
Confidence 234667888888776 3 46664 33 3321 111335677999999988875 389
Q ss_pred CEEEEeccccchh
Q 026978 128 PYTFVSANLCGAY 140 (230)
Q Consensus 128 ~~tilr~g~~~~~ 140 (230)
++++++||++...
T Consensus 151 ~v~~v~pg~v~~~ 163 (202)
T 3d7l_A 151 RINTVSPNVLEES 163 (202)
T ss_dssp EEEEEEECCBGGG
T ss_pred EEEEEecCccCCc
Confidence 9999999988754
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=3.7e-08 Score=80.13 Aligned_cols=131 Identities=14% Similarity=0.118 Sum_probs=87.4
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCH-HHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEH-KKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~-~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++ |++++|+... ++.+.+.... ..+++++.+|++|. +++.++++ ++|+|||+++...
T Consensus 21 ~a~~l~~~G~~~v~~~~r~~~~----~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 96 (254)
T 1sby_A 21 TSRELVKRNLKNFVILDRVENP----TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD 96 (254)
T ss_dssp HHHHHHHTCCSEEEEEESSCCH----HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCcEEEEEecCchH----HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 47889999997 9999997531 1222222221 23578899999998 88877766 7899999998642
Q ss_pred -----------hhhHHHHHHHHHHhCC------cceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 71 -----------FLDQLEIVHAIKVAGN------IKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~------Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
+.+..++++++...-. ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~~~~~ 171 (254)
T 1sby_A 97 DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----IHQVPVYSASKAAVVSFTNSLAKLAPI 171 (254)
T ss_dssp TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----CCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3466777887765320 135663 33 23211 11234677899988876653
Q ss_pred cCCCEEEEeccccchh
Q 026978 125 AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||+....
T Consensus 172 ~gi~v~~v~Pg~v~t~ 187 (254)
T 1sby_A 172 TGVTAYSINPGITRTP 187 (254)
T ss_dssp HSEEEEEEEECSEESH
T ss_pred CCeEEEEEecCCccCc
Confidence 5899999999987643
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.82 E-value=6.3e-08 Score=79.63 Aligned_cols=126 Identities=14% Similarity=0.229 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|+.|.++.|+.. +.+.+. .+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 43 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 115 (266)
T 3grp_A 43 IARCFHAQGAIVGLHGTRED------KLKEIAADL-GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDG 115 (266)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC---
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999642 222221 22 3568999999999999888876 7899999998641
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~ 189 (266)
T 3grp_A 116 LFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVG-----NPGQTNYCAAKAGLIGFSKALAQ 189 (266)
T ss_dssp --CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCC-----CCCchhHHHHHHHHHHHHHHHHH
Confidence 223 344455556667 678874 33 33211 11234677899988776553
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 190 e~~~~gI~vn~v~PG~v~t 208 (266)
T 3grp_A 190 EIASRNITVNCIAPGFIKS 208 (266)
T ss_dssp HHGGGTEEEEEEEECSBCS
T ss_pred HhhhhCcEEEEEeeCcCCC
Confidence 589999999998764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.82 E-value=5.4e-08 Score=80.14 Aligned_cols=130 Identities=13% Similarity=0.179 Sum_probs=88.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.... ++.. .+... ...+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 50 la~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 125 (279)
T 3ctm_A 50 VAEAYAQAGADVAIWYNSHPAD---EKAEHLQKTY-GVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ 125 (279)
T ss_dssp HHHHHHHHTCEEEEEESSSCCH---HHHHHHHHHH-CSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC
T ss_pred HHHHHHHCCCEEEEEeCCHHHH---HHHHHHHHhc-CCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccC
Confidence 4788999999999999985421 1111 11111 34688999999999999888764 899999987421
Q ss_pred -------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+ .+++++++++.+ .++||. |+ .+.... ...+...|..+|..++.+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~l 201 (279)
T 3ctm_A 126 GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN---IPQLQAPYNTAKAACTHLAKSL 201 (279)
T ss_dssp --CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC------CCHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC---CCCCcccHHHHHHHHHHHHHHH
Confidence 112 467888888888 889875 33 222110 012345677999999887764
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.+ ..+.|+||++..
T Consensus 202 a~e~~~~~-~v~~v~Pg~v~t 221 (279)
T 3ctm_A 202 AIEWAPFA-RVNTISPGYIDT 221 (279)
T ss_dssp HHHTTTTC-EEEEEEECSBSS
T ss_pred HHHhcccC-CEEEEeccCCcc
Confidence 36 788899998754
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.9e-08 Score=82.31 Aligned_cols=129 Identities=10% Similarity=0.179 Sum_probs=88.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhh---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEF---QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++.|+.. ++.+.+ ..+ ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 41 ia~~la~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 41 IARTLAKAGANIVLNGFGAP-----DEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQ 115 (281)
T ss_dssp HHHHHHHTTCEEEEECCCCH-----HHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 47899999999999998532 121111 112 13468899999999999988876 789999999864
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~ 189 (281)
T 3v2h_A 116 FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVAS-----PFKSAYVAAKHGIMGLTKT 189 (281)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCC-----CCchHHHHHHHHHHHHHHH
Confidence 123556666665 5666 678774 33 332111 1234677999988877653
Q ss_pred -------cCCCEEEEeccccchh
Q 026978 125 -------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 190 la~e~~~~gI~vn~v~PG~v~t~ 212 (281)
T 3v2h_A 190 VALEVAESGVTVNSICPGYVLTP 212 (281)
T ss_dssp HHHHHGGGTEEEEEEEECSBCC-
T ss_pred HHHHhhhcCcEEEEEECCCCcCc
Confidence 5899999999987643
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.82 E-value=3.9e-08 Score=79.97 Aligned_cols=127 Identities=13% Similarity=0.158 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.++.|+.. +.+.+...-...+..+.+|++|.+++.++++ ++|+|||+++...
T Consensus 25 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 98 (248)
T 3op4_A 25 IAELLAERGAKVIGTATSES------GAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL 98 (248)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999743 2222222113457889999999999988877 7899999998641
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~l~~~la~e 172 (248)
T 3op4_A 99 LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGN-----AGQANYAAAKAGVIGFTKSMARE 172 (248)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC-----CCChHHHHHHHHHHHHHHHHHHH
Confidence 23455566655 3456 578774 33 332211 1234677999988776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 173 ~~~~gi~vn~v~PG~v~T 190 (248)
T 3op4_A 173 VASRGVTVNTVAPGFIET 190 (248)
T ss_dssp HGGGTEEEEEEEECSBSS
T ss_pred HHHhCeEEEEEeeCCCCC
Confidence 589999999998753
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-07 Score=76.80 Aligned_cols=132 Identities=15% Similarity=0.148 Sum_probs=87.2
Q ss_pred CHHHHhhCC---CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCC
Q 026978 1 MVKASVSSG---HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g---~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~ 68 (230)
|+++|+++| ++|++++|+.... ++.+.+... ..+++++.+|++|.+++.++++ ++|+|||+++.
T Consensus 37 la~~L~~~G~~~~~V~~~~r~~~~~---~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 37 LVKALLNLPQPPQHLFTTCRNREQA---KELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHhcCCCCcEEEEEecChhhh---HHHHHhhcc-CCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCc
Confidence 478899999 9999999986532 122212111 3478999999999999988887 79999999985
Q ss_pred CC--------------------hhhHHHHHHHHHHh----------CC----cceEec-cc-ccccCCCCCCCCchhHHH
Q 026978 69 PQ--------------------FLDQLEIVHAIKVA----------GN----IKRFLP-SE-FGCEEDKVRPLPPFEAYL 112 (230)
Q Consensus 69 ~~--------------------~~~~~~ll~Aa~~a----------g~----Vkr~v~-S~-~g~~~~~~~~~~p~~~~~ 112 (230)
.. +.+..++++++... +. ..+||. |+ .+..... +..+...|.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--~~~~~~~Y~ 190 (267)
T 1sny_A 113 APKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN--TDGGMYAYR 190 (267)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC--CSCCCHHHH
T ss_pred CCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC--CCCCchHHH
Confidence 32 23455666666443 10 146764 33 2221111 011345678
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 113 EKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 113 ~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
.+|..++.+.+. .|+.++.|+||++.
T Consensus 191 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 223 (267)
T 1sny_A 191 TSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 223 (267)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHHHHhhcCCcEEEEeCCccee
Confidence 999998876653 58999999998864
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.81 E-value=6.5e-08 Score=78.04 Aligned_cols=124 Identities=16% Similarity=0.190 Sum_probs=83.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +. .+.+ ++.++.+|++| +++.++++ ++|+|||+++...
T Consensus 18 ~a~~l~~~G~~V~~~~r~~~------~~--~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 85 (239)
T 2ekp_A 18 IAEALVARGYRVAIASRNPE------EA--AQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKP 85 (239)
T ss_dssp HHHHHHHTTCEEEEEESSCH------HH--HHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HH--HHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999742 21 1123 58899999998 76665543 7999999998531
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ .+|+|. |+ .+..... ..+...|..+|..++.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e 161 (239)
T 2ekp_A 86 ALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG---PVPIPAYTTAKTALLGLTRALAKE 161 (239)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---TSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC---CCCCccHHHHHHHHHHHHHHHHHH
Confidence 22344444444 5677 788874 33 2221110 01334677999988876643
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 162 ~~~~gi~v~~v~Pg~v~t~ 180 (239)
T 2ekp_A 162 WARLGIRVNLLCPGYVETE 180 (239)
T ss_dssp HGGGTEEEEEEEECSBCSG
T ss_pred hhhcCcEEEEEEeCCccCc
Confidence 5899999999987643
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=5.3e-08 Score=80.61 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=89.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+... +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 45 ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~ 119 (283)
T 1g0o_A 45 MAMELGRRGCKVIVNYANSTE-----SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS 119 (283)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCchH-----HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 478899999999999997431 1111 11222 2358889999999998887765 689999999863
Q ss_pred ------------------ChhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++... + ..++|. |+ .|..... .+...|..+|..++.+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~----~~~~~Y~asK~a~~~~~~~la~ 194 (283)
T 1g0o_A 120 FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAV----PKHAVYSGSKGAIETFARCMAI 194 (283)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSC----SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCC----CCCcchHHHHHHHHHHHHHHHH
Confidence 134677788888876 5 578774 33 3321110 1134677899988876653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 195 e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 195 DMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp HHGGGTCEEEEEEECCBSSH
T ss_pred HhcccCeEEEEEecCcccch
Confidence 5899999999987643
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=8e-08 Score=77.99 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=84.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~ 96 (247)
T 2jah_A 23 TARALAAEGAAVAIAARRVE------KLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML 96 (247)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999742 22211 1221 2358889999999999888776 789999999853
Q ss_pred ------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++.. .+ .++|. |+ .|.... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~l 169 (247)
T 2jah_A 97 LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNV-----RNAAVYQATKFGVNAFSETL 169 (247)
T ss_dssp CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCC-----CCCcHHHHHHHHHHHHHHHH
Confidence 12345566666543 33 47764 33 332111 1234677899887765543
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 170 a~e~~~~gi~v~~v~PG~v~T 190 (247)
T 2jah_A 170 RQEVTERGVRVVVIEPGTTDT 190 (247)
T ss_dssp HHHHGGGTCEEEEEEECSBSS
T ss_pred HHHhcccCcEEEEEECCCCCC
Confidence 589999999998754
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.5e-08 Score=80.37 Aligned_cols=126 Identities=12% Similarity=0.105 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+.. +.+.+ +.+ ...+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~ 94 (253)
T 1hxh_A 22 VVKLLLGEGAKVAFSDINEA------AGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG 94 (253)
T ss_dssp HHHHHHHTTCEEEEECSCHH------HHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999742 22221 122 34688999999999998887764 699999998631
Q ss_pred -----------------hh----hHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FL----DQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+. ..+.++..+++.+ .++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~ 167 (253)
T 1hxh_A 95 DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLP-----IEQYAGYSASKAAVSALTRAAAL 167 (253)
T ss_dssp CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCC-----CCCCccHHHHHHHHHHHHHHHHH
Confidence 11 2234445555555 67774 33 33211 11234677899988876654
Q ss_pred ----c--CCCEEEEeccccchh
Q 026978 125 ----A--QIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~--gl~~tilr~g~~~~~ 140 (230)
. |+.++.|+||++...
T Consensus 168 e~~~~~~gi~v~~v~Pg~v~t~ 189 (253)
T 1hxh_A 168 SCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp HHHHHTCCEEEEEEEESEECCH
T ss_pred HhhhcCCCeEEEEEEeCCccCc
Confidence 3 899999999988654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.3e-08 Score=80.18 Aligned_cols=127 Identities=13% Similarity=0.161 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. +.+.+..- ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 25 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 97 (270)
T 1yde_A 25 IVRAFVNSGARVVICDKDES------GGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQ 97 (270)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHH-hcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999742 22222111 2358899999999999988876 7899999998531
Q ss_pred -----------------hhhHHHHHHHHHH---hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------------FLDQLEIVHAIKV---AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~---ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++.. .+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e 171 (270)
T 1yde_A 98 RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-----AQAVPYVATKGAVTAMTKALALD 171 (270)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC-----CCCcccHHHHHHHHHHHHHHHHH
Confidence 2345666666643 22 367764 43 222111 1234677999988876653
Q ss_pred ---cCCCEEEEeccccchh
Q 026978 125 ---AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 172 ~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 172 ESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HGGGTCEEEEEEECSBCCH
T ss_pred hhhhCcEEEEEEeCccccc
Confidence 5899999999988654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-07 Score=77.67 Aligned_cols=129 Identities=12% Similarity=0.162 Sum_probs=85.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 18 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 91 (256)
T 1geg_A 18 IALRLVKDGFAVAIADYNDA------TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP 91 (256)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47889999999999999742 22111 1221 2358889999999999998887 8999999998531
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++ ++.+...++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~l 166 (256)
T 1geg_A 92 STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PELAVYSSSKFAVRGLTQTA 166 (256)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----CCchhHHHHHHHHHHHHHHH
Confidence 12334444444 34331257764 33 332111 1234677899988876653
Q ss_pred ------cCCCEEEEeccccchh
Q 026978 125 ------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 167 a~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 167 ARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp HHHHGGGTEEEEEEEECSBSSH
T ss_pred HHHHHHcCeEEEEEEECCCccc
Confidence 5899999999988643
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-07 Score=78.89 Aligned_cols=127 Identities=10% Similarity=0.096 Sum_probs=87.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.++.|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 45 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 117 (277)
T 3gvc_A 45 VARRLADEGCHVLCADIDGD------AADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA 117 (277)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999743 22221 223 3568999999999999888776 7899999998641
Q ss_pred -----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~ 191 (277)
T 3gvc_A 118 SLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVA-----VGGTGAYGMSKAGIIQLSRITAA 191 (277)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC-----CCCchhHHHHHHHHHHHHHHHHH
Confidence 23445555554 4455 567774 33 33211 11234677999988877653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 192 e~~~~gI~vn~v~PG~v~t~ 211 (277)
T 3gvc_A 192 ELRSSGIRSNTLLPAFVDTP 211 (277)
T ss_dssp HHGGGTEEEEEEEECSBCCH
T ss_pred HhcccCeEEEEEeeCCccCc
Confidence 6899999999988643
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.8e-08 Score=79.97 Aligned_cols=131 Identities=8% Similarity=0.070 Sum_probs=87.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+..... +-.+.+.......+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 39 ~a~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~ 116 (266)
T 3o38_A 39 TARRALLEGADVVISDYHERRLG--ETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP 116 (266)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEecCCHHHHH--HHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCC
Confidence 47889999999999999753210 00111111112468999999999999888876 6799999998631
Q ss_pred ----------------hhhHHHHHHHHHHh-----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ----------------FLDQLEIVHAIKVA-----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~~a-----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++... + ..++|. |+ .+... ..+...|..+|...+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y~~sKaa~~~~~~~la~ 190 (266)
T 3o38_A 117 VVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-GGVIVNNASVLGWRA-----QHSQSHYAAAKAGVMALTRCSAI 190 (266)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-CEEEEEECCGGGTCC-----CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEeCCHHHcCC-----CCCCchHHHHHHHHHHHHHHHHH
Confidence 23556666766553 4 466764 33 33221 11335677999988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 191 e~~~~gi~v~~v~PG~v~t 209 (266)
T 3o38_A 191 EAVEFGVRINAVSPSIARH 209 (266)
T ss_dssp HHGGGTEEEEEEEECCCCC
T ss_pred HHHHcCcEEEEEeCCcccc
Confidence 589999999998754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.2e-08 Score=80.75 Aligned_cols=127 Identities=13% Similarity=0.208 Sum_probs=85.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|+++.|+.. +.+. .+.++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 60 la~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~ 133 (285)
T 2c07_A 60 IAKMLAKSVSHVICISRTQK------SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITR 133 (285)
T ss_dssp HHHHHTTTSSEEEEEESSHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCEEEEEcCCHH------HHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 47889999999999888632 2211 11222 2357889999999999988874 7899999998531
Q ss_pred -------------------hhhHHHHHHH----HHHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHA----IKVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..+++++ +++.+ .++||. |+. +.... .+...|..+|..++.+.+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~l 207 (285)
T 2c07_A 134 DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN-----VGQANYSSSKAGVIGFTKSL 207 (285)
T ss_dssp CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC-----CCCchHHHHHHHHHHHHHHH
Confidence 2344444444 44667 788874 432 22111 1234677899988776653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.+++|+||++..
T Consensus 208 a~e~~~~gi~v~~v~Pg~v~t 228 (285)
T 2c07_A 208 AKELASRNITVNAIAPGFISS 228 (285)
T ss_dssp HHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHhCcEEEEEEeCcEec
Confidence 489999999998764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.9e-07 Score=76.97 Aligned_cols=127 Identities=12% Similarity=0.149 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC-CCeEEEEecCCCHHHHHHHhcCC-------CEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG-IGVTIIEGELDEHKKIVSILKEV-------DVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~-~gv~vv~gD~~d~~~L~~al~g~-------D~Vi~~~~~~~- 70 (230)
++++|+++|++|++++|+.. +.+.+ ..+.. .++.++.+|++|.+++.++++.+ |+|||+++...
T Consensus 37 ia~~La~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~ 110 (272)
T 2nwq_A 37 CARRFAEAGWSLVLTGRREE------RLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALG 110 (272)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 47889999999999999742 22221 12211 36889999999999999988754 99999998531
Q ss_pred -------------------hhhH----HHHHHHHHHhCCcc-eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 -------------------FLDQ----LEIVHAIKVAGNIK-RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~~~----~~ll~Aa~~ag~Vk-r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+. +.++..+++.+ .. ++|. |+ .+... ......|..+|..++.+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~ 184 (272)
T 2nwq_A 111 TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWP-----YPGSHVYGGTKAFVEQFSLN 184 (272)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccC-----CCCCchHHHHHHHHHHHHHH
Confidence 1233 33455555667 67 8874 33 33211 11234677999998887764
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 185 la~el~~~gIrvn~v~PG~v~T 206 (272)
T 2nwq_A 185 LRCDLQGTGVRVTNLEPGLCES 206 (272)
T ss_dssp HHTTCTTSCCEEEEEEECSBC-
T ss_pred HHHHhCccCeEEEEEEcCCCcC
Confidence 479999999998764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.3e-08 Score=79.47 Aligned_cols=119 Identities=16% Similarity=0.215 Sum_probs=82.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-------CCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-------VDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-------~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... + ..+.++.+|++|.+++.++++. +|+|||+++...
T Consensus 37 ia~~l~~~G~~V~~~~r~~~~------------~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 102 (253)
T 2nm0_A 37 IARAFADAGDKVAITYRSGEP------------P--EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL 102 (253)
T ss_dssp HHHHHHHTTCEEEEEESSSCC------------C--TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC
T ss_pred HHHHHHHCCCEEEEEeCChHh------------h--ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478899999999999997432 1 2378899999999998887764 699999998531
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ ..++|. |+. +... ..+...|..+|..++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e 176 (253)
T 2nm0_A 103 LMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLG-----SAGQANYAASKAGLVGFARSLARE 176 (253)
T ss_dssp ---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC-----CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 23445555544 4457 678874 432 2211 01223577899988876653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 177 ~~~~gi~vn~v~PG~v~T 194 (253)
T 2nm0_A 177 LGSRNITFNVVAPGFVDT 194 (253)
T ss_dssp HCSSSEEEEEEEECSBCC
T ss_pred hhhcCeEEEEEEeCcCcC
Confidence 589999999997653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=1e-07 Score=78.04 Aligned_cols=127 Identities=13% Similarity=0.240 Sum_probs=84.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~ 96 (262)
T 1zem_A 23 TALRLAEEGTAIALLDMNRE------ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQG 96 (262)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47889999999999999742 22111 1222 2357889999999998887766 789999999853
Q ss_pred -------------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++. +.+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~ 170 (262)
T 1zem_A 97 AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-----PNMAAYGTSKGAIIALTET 170 (262)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC-----TTBHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----CCCchHHHHHHHHHHHHHH
Confidence 1224445555544 456 678774 43 222111 1234677899887766543
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 171 la~e~~~~gi~vn~v~PG~v~t 192 (262)
T 1zem_A 171 AALDLAPYNIRVNAISPGYMGP 192 (262)
T ss_dssp HHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHhhCeEEEEEecCCcCc
Confidence 589999999998753
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-07 Score=78.58 Aligned_cols=128 Identities=14% Similarity=0.190 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--C---CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--I---GVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~---gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|++++|+.. +.+.+ +.+.. . .+.++.+|++|.+++.++++ ++|+|||+++
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg 95 (280)
T 1xkq_A 22 TAILFAQEGANVTITGRSSE------RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG 95 (280)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 47889999999999999742 22211 12221 1 58899999999999888876 6899999998
Q ss_pred CC-----------------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHH
Q 026978 68 YP-----------------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 68 ~~-----------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
.. ++.+..++++++.. .+ .++|. |+....... ..+...|..+|..++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~---~~~~~~Y~asK~a~~ 170 (280)
T 1xkq_A 96 AAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQA---QPDFLYYAIAKAALD 170 (280)
T ss_dssp CCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSC---CCSSHHHHHHHHHHH
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCC---CCcccHHHHHHHHHH
Confidence 42 12345566666554 33 57764 432221111 012346778999888
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. .|+.++.|+||++..
T Consensus 171 ~~~~~la~e~~~~gi~v~~v~PG~v~t 197 (280)
T 1xkq_A 171 QYTRSTAIDLAKFGIRVNSVSPGMVET 197 (280)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCBCS
T ss_pred HHHHHHHHHhccCCeEEEEEeeCcCcC
Confidence 76653 589999999998764
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.76 E-value=8e-08 Score=78.35 Aligned_cols=127 Identities=9% Similarity=0.103 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+..... + ....+ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 96 (257)
T 3tpc_A 23 VTRMLAQEGATVLGLDLKPPAGE---E--PAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEK 96 (257)
T ss_dssp HHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCChHHHH---H--HHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 47889999999999999865431 1 11122 3468899999999999998887 899999999853
Q ss_pred -------------------ChhhHHHHHHHHHHh----------CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIKVA----------GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~a----------g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
++.+..++++++... + ..++|. |+ .+.... .+...|..+|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~ 170 (257)
T 3tpc_A 97 ILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE-RGVIVNTASIAAFDGQ-----IGQAAYAASKGGV 170 (257)
T ss_dssp SEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC-----TTCHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC-CeEEEEEechhhccCC-----CCCcchHHHHHHH
Confidence 123566677777653 3 456664 33 222111 1234677999888
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+.+. .|+....|+||+...
T Consensus 171 ~~~~~~la~e~~~~gi~vn~v~PG~v~t 198 (257)
T 3tpc_A 171 AALTLPAARELARFGIRVVTIAPGIFDT 198 (257)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBSC
T ss_pred HHHHHHHHHHHHHcCeEEEEEEeCCCCC
Confidence 776543 689999999998764
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.3e-07 Score=76.65 Aligned_cols=119 Identities=13% Similarity=0.151 Sum_probs=81.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+..... . +..+.+|++|.+++.++++ ++|+|||+++...
T Consensus 31 ia~~l~~~G~~V~~~~r~~~~~~---------~-----~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 96 (247)
T 1uzm_A 31 IAQRLAADGHKVAVTHRGSGAPK---------G-----LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF 96 (247)
T ss_dssp HHHHHHHTTCEEEEEESSSCCCT---------T-----SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC---
T ss_pred HHHHHHHCCCEEEEEeCChHHHH---------H-----hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999754321 1 1237899999999888776 5799999998631
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~la~e 170 (247)
T 1uzm_A 97 LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----GNQANYAASKAGVIGMARSIARE 170 (247)
T ss_dssp --CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-----CCChhHHHHHHHHHHHHHHHHHH
Confidence 23445555554 4566 788874 33 222111 1234677899988776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 171 ~~~~gi~v~~v~PG~v~t 188 (247)
T 1uzm_A 171 LSKANVTANVVAPGYIDT 188 (247)
T ss_dssp HGGGTEEEEEEEECSBCC
T ss_pred hhhcCcEEEEEEeCCCcc
Confidence 589999999998864
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=4.5e-08 Score=80.58 Aligned_cols=127 Identities=14% Similarity=0.141 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|++++|+.. +.+.+ +.++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 47 la~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 47 TAYEFAKLKSKLVLWDINKH------GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEEcCHH------HHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCC
Confidence 47889999999999999743 21111 1221 2468899999999999988876 7899999998631
Q ss_pred -------------------hhhHHH----HHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLE----IVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~----ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..+ ++..+++.+ .+++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 121 TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS-----VPFLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC-----CCCchhHHHHHHHHHHHHHHH
Confidence 123333 444455667 788874 33 22211 11234577899988876643
Q ss_pred ---------cCCCEEEEeccccch
Q 026978 125 ---------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 195 a~e~~~~~~~gi~v~~v~Pg~v~t 218 (272)
T 1yb1_A 195 TDELAALQITGVKTTCLCPNFVNT 218 (272)
T ss_dssp HHHHHHTTCTTEEEEEEEETHHHH
T ss_pred HHHHHHhCCCCeEEEEEeCCcccC
Confidence 279999999987643
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-08 Score=89.04 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=90.0
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhcCC------CEEEEcCCCC-
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILKEV------DVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~g~------D~Vi~~~~~~- 69 (230)
|++.|+++|+. |++++|+.... + +.+. ...++. ..++++.+|++|.+++.++++.+ |+|||+++..
T Consensus 242 la~~La~~G~~~vvl~~R~~~~~--~-~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~ 318 (486)
T 2fr1_A 242 IARWLARRGAPHLLLVSRSGPDA--D-GAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLD 318 (486)
T ss_dssp HHHHHHHHTCSEEEEEESSGGGS--T-THHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHHHcCCCEEEEEcCCCCCc--H-HHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCC
Confidence 46889999995 89999975321 1 1111 122322 34788999999999999999876 9999999863
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcceEec-ccc-cccCCCCCCCCchhHHHHHHHHHHHHH---HHcC
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIKRFLP-SEF-GCEEDKVRPLPPFEAYLEKKRIVRRAI---EAAQ 126 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~-g~~~~~~~~~~p~~~~~~~K~~~e~~l---~~~g 126 (230)
++.+..+|.+++++.+ .++||. |+. +..... ....|..+|...+.+. +..|
T Consensus 319 ~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~-----g~~~Yaaaka~l~~la~~~~~~g 392 (486)
T 2fr1_A 319 DGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP-----GLGGYAPGNAYLDGLAQQRRSDG 392 (486)
T ss_dssp CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT-----TCTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCC-----CCHHHHHHHHHHHHHHHHHHhcC
Confidence 1457888999999888 889884 432 211111 1234667777766544 4579
Q ss_pred CCEEEEeccccchh
Q 026978 127 IPYTFVSANLCGAY 140 (230)
Q Consensus 127 l~~tilr~g~~~~~ 140 (230)
++++.|+||++.+.
T Consensus 393 i~v~~i~pG~~~~~ 406 (486)
T 2fr1_A 393 LPATAVAWGTWAGS 406 (486)
T ss_dssp CCCEEEEECCBC--
T ss_pred CeEEEEECCeeCCC
Confidence 99999999998753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.76 E-value=7.6e-08 Score=79.62 Aligned_cols=127 Identities=11% Similarity=0.165 Sum_probs=87.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|+.. +.+. ...+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 40 ia~~la~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 40 VARTLAARGIAVYGCARDAK------NVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 47889999999999999743 2111 11222 2468899999999999888776 689999999864
Q ss_pred ------------------ChhhHHHHHHHHHH------hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIKV------AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~------ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+..++++++.. .+ ..++|. |+ .+... ..+...|..+|..++.+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~ 187 (279)
T 3sju_A 114 GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQG-----VMYAAPYTASKHGVVGFTK 187 (279)
T ss_dssp CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccC-----CCCChhHHHHHHHHHHHHH
Confidence 13456666776543 56 578774 33 33211 1123467799998887665
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+....|+||+...
T Consensus 188 ~la~e~~~~gi~vn~v~PG~v~T 210 (279)
T 3sju_A 188 SVGFELAKTGITVNAVCPGYVET 210 (279)
T ss_dssp HHHHHTGGGTEEEEEEEESSBCS
T ss_pred HHHHHHHhhCcEEEEEeeCcccc
Confidence 3 589999999998754
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.75 E-value=9.9e-08 Score=78.18 Aligned_cols=125 Identities=12% Similarity=0.148 Sum_probs=86.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.... .+ .+...++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 43 ia~~l~~~G~~V~~~~r~~~~~-----~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 114 (260)
T 3gem_A 43 CALRLLEHGHRVIISYRTEHAS-----VT---ELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET 114 (260)
T ss_dssp HHHHHHHTTCCEEEEESSCCHH-----HH---HHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCChHHH-----HH---HHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC
Confidence 4788999999999999975321 11 2333468999999999999888876 6899999998541
Q ss_pred ---------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ---------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ---------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++. +.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 115 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e~ 188 (260)
T 3gem_A 115 PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGS-----SKHIAYCATKAGLESLTLSFAARF 188 (260)
T ss_dssp TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCC-----SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC-----CCcHhHHHHHHHHHHHHHHHHHHH
Confidence 234555666553 445 567774 33 332111 1234677999988877653
Q ss_pred -cCCCEEEEeccccch
Q 026978 125 -AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -~gl~~tilr~g~~~~ 139 (230)
.++....|+||+...
T Consensus 189 ~~~Irvn~v~PG~v~t 204 (260)
T 3gem_A 189 APLVKVNGIAPALLMF 204 (260)
T ss_dssp TTTCEEEEEEECTTCC
T ss_pred CCCCEEEEEeeccccc
Confidence 358889999998753
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.4e-07 Score=75.58 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.+++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 95 (257)
T 3imf_A 22 MATRFAKEGARVVITGRTKE------KLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF 95 (257)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 22221 1222 2358889999999999888876 789999999853
Q ss_pred ------------------ChhhHHHHHHHH-----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI-----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE- 123 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa-----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~- 123 (230)
++.+..++++++ ++.+ ..++|. |..+.... .....|..+|..++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~ 169 (257)
T 3imf_A 96 ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAWDAG-----PGVIHSAAAKAGVLAMTKT 169 (257)
T ss_dssp CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGGSCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhccCC-----CCcHHHHHHHHHHHHHHHH
Confidence 133556666666 3444 567774 33332211 123467789988776543
Q ss_pred -------HcCCCEEEEeccccch
Q 026978 124 -------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 124 -------~~gl~~tilr~g~~~~ 139 (230)
..|+....|+||+...
T Consensus 170 la~e~~~~~gIrvn~v~PG~v~t 192 (257)
T 3imf_A 170 LAVEWGRKYGIRVNAIAPGPIER 192 (257)
T ss_dssp HHHHHHHHHCCEEEEEEECCBSS
T ss_pred HHHHhccccCeEEEEEEECCCcC
Confidence 2489999999998753
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-07 Score=79.20 Aligned_cols=128 Identities=11% Similarity=0.102 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhh-------cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEc
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEF-------QGIGVTIIEGELDEHKKIVSILK-------EVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l-------~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~ 65 (230)
|+++|+++|++|++++|+.. +.+. .+.+ ....+.++.+|++|.+++.++++ ++|+|||+
T Consensus 34 la~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~ 107 (303)
T 1yxm_A 34 IVKELLELGSNVVIASRKLE------RLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNN 107 (303)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 47889999999999999743 1111 1112 13468899999999999988876 48999999
Q ss_pred CCCC-------------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 66 VAYP-------------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 66 ~~~~-------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
++.. ++.+..++++++.. .+ ..++|. |+... ... .....|..+|...+.+
T Consensus 108 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~---~~~--~~~~~Y~~sK~a~~~~ 181 (303)
T 1yxm_A 108 GGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK---AGF--PLAVHSGAARAGVYNL 181 (303)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT---TCC--TTCHHHHHHHHHHHHH
T ss_pred CCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeecc---cCC--CcchhhHHHHHHHHHH
Confidence 9842 13466778887655 33 366764 33321 111 1224566888887765
Q ss_pred HHH-------cCCCEEEEeccccchh
Q 026978 122 IEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~~ 140 (230)
.+. .|+.++.|+||+....
T Consensus 182 ~~~la~e~~~~gi~v~~v~Pg~v~t~ 207 (303)
T 1yxm_A 182 TKSLALEWACSGIRINCVAPGVIYSQ 207 (303)
T ss_dssp HHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHhcccCeEEEEEecCCcccc
Confidence 543 4899999999988653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=8.2e-08 Score=77.94 Aligned_cols=127 Identities=14% Similarity=0.223 Sum_probs=86.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.++.|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 22 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 94 (247)
T 3rwb_A 22 IAARLAADGATVIVSDINAE------GAKAAAASI-GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFV 94 (247)
T ss_dssp HHHHHHHTTCEEEEECSCHH------HHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
Confidence 47889999999999998743 22221 223 4568899999999999988877 7899999998641
Q ss_pred -----------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..+++++ +++.+...++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~ 169 (247)
T 3rwb_A 95 AWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----PNMAAYVAAKGGVIGFTRALAT 169 (247)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----CCchhhHHHHHHHHHHHHHHHH
Confidence 2344555555 555552357764 33 222111 1234677899888776553
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 170 e~~~~gi~vn~v~PG~v~t 188 (247)
T 3rwb_A 170 ELGKYNITANAVTPGLIES 188 (247)
T ss_dssp HHGGGTEEEEEEEECSBCC
T ss_pred HhhhcCeEEEEEeeCcCcC
Confidence 589999999998754
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-07 Score=74.66 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhcCC----CEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILKEV----DVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~g~----D~Vi~~~~~~------ 69 (230)
++++|+++|++|.+++|+.. +.+.+. .+ ...+.++.+|++|.+++.++++.+ |+|||+++..
T Consensus 17 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~ 89 (230)
T 3guy_A 17 LAKLYDAEGKATYLTGRSES------KLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQ 89 (230)
T ss_dssp HHHHHHHTTCCEEEEESCHH------HHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCCCCCSCGG
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCCCccc
Confidence 47889999999999999743 222222 22 356889999999999999998866 8999999853
Q ss_pred -------------ChhhHHHHHHHHHHhCCc---ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 70 -------------QFLDQLEIVHAIKVAGNI---KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 70 -------------~~~~~~~ll~Aa~~ag~V---kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
++.+..++++++...- . .++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 90 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~ 163 (230)
T 3guy_A 90 EQDPEQIQTLIENNLSSAINVLRELVKRY-KDQPVNVVMIMSTAAQQP-----KAQESTYCAVKWAVKGLIESVRLELKG 163 (230)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHH-TTSCCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEeecccCCC-----CCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 1235566677665532 1 26663 33 33211 11234677999988877653
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 164 ~gi~v~~v~PG~v~t 178 (230)
T 3guy_A 164 KPMKIIAVYPGGMAT 178 (230)
T ss_dssp SSCEEEEEEECCC--
T ss_pred cCeEEEEEECCcccC
Confidence 489999999998754
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.4e-07 Score=76.76 Aligned_cols=131 Identities=15% Similarity=0.223 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+++|...... ....+.+... ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 29 ia~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 106 (256)
T 3ezl_A 29 ICQRLHKDGFRVVAGCGPNSPRR-VKWLEDQKAL-GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV 106 (256)
T ss_dssp HHHHHHHTTEEEEEEECTTCSSH-HHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCHHHH-HHHHHHHHhc-CCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence 47899999999999885433211 1111111111 2468899999999999888877 7899999998641
Q ss_pred ----------------hhhHHHH----HHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEI----VHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~l----l~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++ +..+++.+ ..|+|. |+ .+.... .+...|..+|...+.+.+.
T Consensus 107 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~la~e 180 (256)
T 3ezl_A 107 FRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ-----FGQTNYSTAKAGIHGFTMSLAQE 180 (256)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSC-----SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCC-----CCCcccHHHHHHHHHHHHHHHHH
Confidence 2344444 44456677 678774 33 232111 1234677899988776543
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 181 ~~~~gi~v~~v~PG~v~t 198 (256)
T 3ezl_A 181 VATKGVTVNTVSPGYIGT 198 (256)
T ss_dssp HGGGTEEEEEEEECSBCC
T ss_pred HHHhCCEEEEEEECcccC
Confidence 589999999998754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.73 E-value=8.8e-08 Score=78.36 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=85.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
|+++|+++|++|++++|+.. +.+.+ +.+. ...++++.+|++|.+++.++++ .+|+|||+++..
T Consensus 45 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~ 118 (262)
T 3rkr_A 45 IARKLGSLGARVVLTARDVE------KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGW 118 (262)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccC
Confidence 47889999999999999743 22211 1221 2457899999999999888776 489999999862
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ ..++|. |+ .|... ..+...|..+|..++.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~ 192 (262)
T 3rkr_A 119 FGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNP-----VADGAAYTASKWGLNGLMTS 192 (262)
T ss_dssp CSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCC-----CTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCC-----CCCCchHHHHHHHHHHHHHH
Confidence 123445555554 4566 678774 33 33211 11234677899888776543
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 193 la~e~~~~gi~v~~v~PG~v~t 214 (262)
T 3rkr_A 193 AAEELRQHQVRVSLVAPGSVRT 214 (262)
T ss_dssp HHHHHGGGTCEEEEEEECCC--
T ss_pred HHHHhhhcCcEEEEEecCCCcC
Confidence 589999999998754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.73 E-value=5.9e-08 Score=81.91 Aligned_cols=129 Identities=11% Similarity=0.085 Sum_probs=85.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CC--CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GI--GVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
|+++|+++|++|++++|+.. +.+.+ ..+. .. .+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 24 la~~l~~~G~~Vv~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 24 LVRQLLNQGCKVAIADIRQD------SIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 47899999999999999753 22111 1221 12 68899999999999988876 56999999985
Q ss_pred C-------------------ChhhHHHHHHHHHHhC---------CcceEec-ccccccCCCCCCCCchhHHHHHHHHHH
Q 026978 69 P-------------------QFLDQLEIVHAIKVAG---------NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 69 ~-------------------~~~~~~~ll~Aa~~ag---------~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
. ++.+..++++++.... .-.++|. |+....... .....|..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----~~~~~Y~aSKaal~ 173 (319)
T 3ioy_A 98 NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----GSPGIYNTTKFAVR 173 (319)
T ss_dssp CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC----SSSHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC----CCCHHHHHHHHHHH
Confidence 3 1345667777665543 0235764 443221111 12246778999766
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. .|+..+.|.||+...
T Consensus 174 ~~~~~la~e~~~~gi~v~~v~PG~v~T 200 (319)
T 3ioy_A 174 GLSESLHYSLLKYEIGVSVLCPGLVKS 200 (319)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCBC-
T ss_pred HHHHHHHHHhhhcCCEEEEEEcCeEcc
Confidence 55432 589999999998764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=7.8e-08 Score=79.16 Aligned_cols=128 Identities=12% Similarity=0.137 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.|.... +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 44 ia~~la~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 44 IALELAAAGAKVAVNYASSAG-----AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCChH-----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999999985321 11111 1121 2467889999999999988877 7899999998641
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~l~~~l 192 (269)
T 4dmm_A 119 DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGN-----PGQANYSAAKAGVIGLTKTV 192 (269)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC-----CCchhHHHHHHHHHHHHHHH
Confidence 23455566654 4556 578774 33 232111 1234677999988776543
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 193 a~e~~~~gi~vn~v~PG~v~T 213 (269)
T 4dmm_A 193 AKELASRGITVNAVAPGFIAT 213 (269)
T ss_dssp HHHHGGGTCEEEEEEECCBTT
T ss_pred HHHHhhhCcEEEEEEECCCcC
Confidence 589999999998754
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=2.9e-07 Score=75.87 Aligned_cols=127 Identities=12% Similarity=0.181 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.++.|+... .+....+.. ..++++.+|++|.+++.++.+ ++|+|||+++...
T Consensus 47 ia~~la~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~ 120 (273)
T 3uf0_A 47 IAHGYARAGAHVLAWGRTDGV------KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARA 120 (273)
T ss_dssp HHHHHHHTTCEEEEEESSTHH------HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEcCHHHH------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCC
Confidence 478999999999999976321 111222322 357889999999998877654 7899999998641
Q ss_pred -----------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~ 194 (273)
T 3uf0_A 121 PAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGG-----RNVAAYAASKHAVVGLTRALAS 194 (273)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCC-----CCChhHHHHHHHHHHHHHHHHH
Confidence 23455566655 5567 678774 33 332111 1234677999988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 195 e~~~~gI~vn~v~PG~v~T 213 (273)
T 3uf0_A 195 EWAGRGVGVNALAPGYVVT 213 (273)
T ss_dssp HHGGGTEEEEEEEECSBCS
T ss_pred HHhhcCcEEEEEEeCCCcC
Confidence 589999999998754
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.7e-07 Score=76.22 Aligned_cols=130 Identities=11% Similarity=0.171 Sum_probs=87.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~----- 69 (230)
++++|+++|++|++++|+..... +-.+.+.. ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 49 ia~~la~~G~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (275)
T 4imr_A 49 IAEGLAGAGAHVILHGVKPGSTA--AVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATL 125 (275)
T ss_dssp HHHHHHHTTCEEEEEESSTTTTH--HHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCG
T ss_pred HHHHHHHCCCEEEEEcCCHHHHH--HHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence 47889999999999999765421 11111111 13468899999999988888776 789999999863
Q ss_pred --------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 --------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 --------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
|+.+..++++++ ++.+ ..++|. |+ .+.. +..+...|..+|..++.+.+.
T Consensus 126 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~-----~~~~~~~Y~asKaa~~~l~~~la~e~ 199 (275)
T 4imr_A 126 SALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR-----PKSVVTAYAATKAAQHNLIQSQARDF 199 (275)
T ss_dssp GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-----CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC-----CCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 123455566655 5566 678774 33 3322 111234678999988876653
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 200 ~~~gI~vn~v~PG~v~T 216 (275)
T 4imr_A 200 AGDNVLLNTLAPGLVDT 216 (275)
T ss_dssp GGGTEEEEEEEESSBCS
T ss_pred cccCcEEEEEEeccccC
Confidence 489999999998754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2e-07 Score=76.67 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEEEc-CCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCH----HHHHHHhc-------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYAR-PVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEH----KKIVSILK-------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R-~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~----~~L~~al~-------g~D~Vi~ 64 (230)
++++|+++|++|++++| +.. +.+.+ +.+. ...+.++.+|++|. +++.++++ ++|+|||
T Consensus 27 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~ 100 (276)
T 1mxh_A 27 IAVRLHQQGFRVVVHYRHSEG------AAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVN 100 (276)
T ss_dssp HHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHCCCEEEEEeCCChH------HHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 47889999999999999 532 22211 1221 24588999999999 88888776 7899999
Q ss_pred cCCCCC------------------------------hhhHHHHHHHHHH---hCCc------ceEec-cc-ccccCCCCC
Q 026978 65 TVAYPQ------------------------------FLDQLEIVHAIKV---AGNI------KRFLP-SE-FGCEEDKVR 103 (230)
Q Consensus 65 ~~~~~~------------------------------~~~~~~ll~Aa~~---ag~V------kr~v~-S~-~g~~~~~~~ 103 (230)
+++... +.+..++++++.. .+ . .++|. |+ .+...
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~g~iv~isS~~~~~~---- 175 (276)
T 1mxh_A 101 NASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG-GAWRSRNLSVVNLCDAMTDLP---- 175 (276)
T ss_dssp CCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSC----
T ss_pred CCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCCCCCcEEEEECchhhcCC----
Confidence 998531 1244567777776 34 4 67774 33 33211
Q ss_pred CCCchhHHHHHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 104 PLPPFEAYLEKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 104 ~~~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
..+...|..+|..++.+.+. .|+.++.|+||++..
T Consensus 176 -~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t 217 (276)
T 1mxh_A 176 -LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 217 (276)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred -CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence 11234677899988876653 489999999998754
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.72 E-value=9.6e-08 Score=77.95 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=87.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 28 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 28 IAGTFAKAGASVVVTDLKSE------GAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHHHHHHTCEEEEEESSHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 21111 1221 2468889999999999888876 7899999998631
Q ss_pred ------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la 175 (256)
T 3gaf_A 102 PKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENT-----NVRMASYGSSKAAVNHLTRNIA 175 (256)
T ss_dssp CCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCC-----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCC-----CCCchHHHHHHHHHHHHHHHHH
Confidence 23455666665 4556 577774 33 33211 11235678999988877653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 176 ~e~~~~gi~vn~v~PG~v~T 195 (256)
T 3gaf_A 176 FDVGPMGIRVNAIAPGAIKT 195 (256)
T ss_dssp HHHGGGTEEEEEEEECCBCC
T ss_pred HHHhhhCcEEEEEEEccccC
Confidence 589999999998764
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-07 Score=78.63 Aligned_cols=129 Identities=16% Similarity=0.185 Sum_probs=88.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 44 ia~~la~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 117 (283)
T 3v8b_A 44 TALALAADGVTVGALGRTRT------EVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGING 117 (283)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47889999999999999743 21111 1222 2357889999999999888876 789999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++ ++.+ ..++|. |+ .|.... +..+...|..+|..++.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---~~~~~~~Y~asKaa~~~l~~~ 193 (283)
T 3v8b_A 118 VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTF---TTPGATAYTATKAAQVAIVQQ 193 (283)
T ss_dssp CBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---CSTTCHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCC---CCCCchHHHHHHHHHHHHHHH
Confidence 123556666666 6666 678774 33 332110 111234677999998877653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 194 la~e~~~~gI~vn~v~PG~v~T 215 (283)
T 3v8b_A 194 LALELGKHHIRVNAVCPGAIET 215 (283)
T ss_dssp HHHHTTTTTEEEEEEEECSBSS
T ss_pred HHHHhCccCcEEEEEEeCCCcC
Confidence 578999999998753
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-07 Score=75.27 Aligned_cols=131 Identities=16% Similarity=0.180 Sum_probs=85.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.+++|+..... +-.+.+..-....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~ 95 (235)
T 3l77_A 18 IARALARDGYALALGARSVDRLE--KIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR 95 (235)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccC
Confidence 47899999999999999743210 00111111113568899999999999999887 789999999864
Q ss_pred ---------------ChhhHHHHHHHHHH----hCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ---------------QFLDQLEIVHAIKV----AGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++.. .+ -+.++. |..+.... .....|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~-----~~~~~Y~~sKaa~~~~~~~l~~~~ 169 (235)
T 3l77_A 96 LEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTTSDVSARLI-----PYGGGYVSTKWAARALVRTFQIEN 169 (235)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSCC-----TTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEecchhcccC-----CCcchHHHHHHHHHHHHHHHhhcC
Confidence 12355666666543 33 233333 33332211 1124677899988877654
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.++..+.|+||+...
T Consensus 170 ~~i~v~~v~PG~v~T 184 (235)
T 3l77_A 170 PDVRFFELRPGAVDT 184 (235)
T ss_dssp TTSEEEEEEECSBSS
T ss_pred CCeEEEEEeCCcccc
Confidence 589999999998754
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.4e-07 Score=76.91 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=82.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|++++|+..... + ....++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~ 97 (252)
T 3h7a_A 23 IAKKFAAEGFTVFAGRRNGEKLA---P--LVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNF 97 (252)
T ss_dssp HHHHHHHTTCEEEEEESSGGGGH---H--HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH---H--HHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCC
Confidence 47889999999999999754221 1 111222 2457899999999999998887 6799999999631
Q ss_pred -----------------hhhHHHHHHH----HHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHA----IKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~A----a~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..+++++ +++.+ ..++|. |..|.... .....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~ 171 (252)
T 3h7a_A 98 PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGG-----SGFAAFASAKFGLRAVAQSMAR 171 (252)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCC-----CCCccHHHHHHHHHHHHHHHHH
Confidence 2234444444 45666 567774 33332111 1234677999888876553
Q ss_pred ----cCCCE-EEEeccccch
Q 026978 125 ----AQIPY-TFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~-tilr~g~~~~ 139 (230)
.|+.. ..+.||+...
T Consensus 172 e~~~~gi~v~n~v~PG~v~T 191 (252)
T 3h7a_A 172 ELMPKNIHVAHLIIDSGVDT 191 (252)
T ss_dssp HHGGGTEEEEEEEEC-----
T ss_pred HhhhcCCEEEEEecCCccCC
Confidence 57888 7899987753
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-07 Score=79.49 Aligned_cols=130 Identities=12% Similarity=0.163 Sum_probs=87.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc-----CCCeEEEEecCCCHHHHHHHhcC-----CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ-----GIGVTIIEGELDEHKKIVSILKE-----VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~-----~~gv~vv~gD~~d~~~L~~al~g-----~D~Vi~~~~~~ 69 (230)
|+++|+++|++|.++.|+.... ++.. .+..+. ...+.++.+|++|.+++.++++. +|+|||+++..
T Consensus 18 la~~L~~~G~~v~~v~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~ 94 (327)
T 1jtv_A 18 LAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG 94 (327)
T ss_dssp HHHHHHTCTTCCEEEEEEESCG---GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCC
T ss_pred HHHHHHHCCCceEEEEeecCcH---HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 4788999999999988865432 1111 111111 24688999999999999999875 89999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
|+.+..++++++ ++.+ ..|+|. |+ .+.... .....|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~aSK~a~~~~~~~ 168 (327)
T 1jtv_A 95 LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL-----PFNDVYCASKFALEGLCES 168 (327)
T ss_dssp CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCC-----CCChHHHHHHHHHHHHHHH
Confidence 123556666664 5567 788874 33 332111 1224677899988876643
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||++..
T Consensus 169 la~el~~~gI~v~~v~PG~v~T 190 (327)
T 1jtv_A 169 LAVLLLPFGVHLSLIECGPVHT 190 (327)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHhhhcCcEEEEEEeCcccC
Confidence 589999999998754
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-07 Score=76.95 Aligned_cols=129 Identities=7% Similarity=0.089 Sum_probs=84.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|++++|+.. +.+. ...+. ..++.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 23 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 23 FAEALLLKGAKVALVDWNLE------AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 47889999999999999742 2111 11221 2358899999999999988876 46999999986
Q ss_pred CC-----------hh----hHHHHHHHHHHhC--CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH------
Q 026978 69 PQ-----------FL----DQLEIVHAIKVAG--NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE------ 123 (230)
Q Consensus 69 ~~-----------~~----~~~~ll~Aa~~ag--~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~------ 123 (230)
.. +. ..+.++.++++.+ ...++|. |+ .+.... .+...|..+|..++.+.+
T Consensus 97 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~~ala~ 171 (267)
T 2gdz_A 97 NNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----AQQPVYCASKHGIVGFTRSAALAA 171 (267)
T ss_dssp CCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----CCCchHHHHHHHHHHHHHHHHHHH
Confidence 42 11 3455566665542 1367774 33 332211 123467789988776544
Q ss_pred ---HcCCCEEEEeccccchh
Q 026978 124 ---AAQIPYTFVSANLCGAY 140 (230)
Q Consensus 124 ---~~gl~~tilr~g~~~~~ 140 (230)
..|+.++.|+||++...
T Consensus 172 e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 172 NLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp HHHTCCEEEEEEEESCBSSH
T ss_pred HhccCCcEEEEEecCcCcch
Confidence 26899999999987643
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.70 E-value=2e-07 Score=76.97 Aligned_cols=127 Identities=10% Similarity=0.175 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC-CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~-~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|++++|+.. +.+. .+.+.. .++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 45 ia~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~ 118 (276)
T 2b4q_A 45 IAQGLLEAGARVFICARDAE------ACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG 118 (276)
T ss_dssp HHHHHHHTTCEEEEECSCHH------HHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 47889999999999999742 2211 112221 258889999999999888876 7899999998531
Q ss_pred ------------------hhhHHHHHH----HHHHhCCc----ceEec-cc-ccccCCCCCCCCchh-HHHHHHHHHHHH
Q 026978 71 ------------------FLDQLEIVH----AIKVAGNI----KRFLP-SE-FGCEEDKVRPLPPFE-AYLEKKRIVRRA 121 (230)
Q Consensus 71 ------------------~~~~~~ll~----Aa~~ag~V----kr~v~-S~-~g~~~~~~~~~~p~~-~~~~~K~~~e~~ 121 (230)
+.+..++++ .+++.+ . +++|. |+ .+..... ... .|..+|..++.+
T Consensus 119 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~-----~~~~~Y~asK~a~~~~ 192 (276)
T 2b4q_A 119 AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMG-----EQAYAYGPSKAALHQL 192 (276)
T ss_dssp CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCC-----CSCTTHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCC-----CCccccHHHHHHHHHH
Confidence 223444444 444555 4 78774 33 3321111 122 577899988876
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .|+.++.|+||++..
T Consensus 193 ~~~la~e~~~~gI~vn~v~PG~v~T 217 (276)
T 2b4q_A 193 SRMLAKELVGEHINVNVIAPGRFPS 217 (276)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred HHHHHHHhcccCeEEEEEEeccCcC
Confidence 653 589999999998764
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-07 Score=77.65 Aligned_cols=133 Identities=13% Similarity=0.152 Sum_probs=88.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC------CcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS------RPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~------~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~ 64 (230)
++++|+++|++|.+++|+..... ..++.+.. ..+. ...+.++.+|++|.+++.++++ ++|+|||
T Consensus 26 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 105 (281)
T 3s55_A 26 HAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAIT 105 (281)
T ss_dssp HHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899999999999999743210 01111111 1111 2467889999999999888877 7899999
Q ss_pred cCCCCC-------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHH
Q 026978 65 TVAYPQ-------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 65 ~~~~~~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
+++... +.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++
T Consensus 106 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~ 179 (281)
T 3s55_A 106 NAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSAN-----FAQASYVSSKWGVI 179 (281)
T ss_dssp CCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-----TTCHHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCC-----CCCchhHHHHHHHH
Confidence 998641 23556666664 5566 578774 33 332211 12346779999888
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. .|+....|+||+...
T Consensus 180 ~~~~~la~e~~~~gi~vn~v~PG~v~t 206 (281)
T 3s55_A 180 GLTKCAAHDLVGYGITVNAVAPGNIET 206 (281)
T ss_dssp HHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcccC
Confidence 76653 589999999998764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.2e-07 Score=76.88 Aligned_cols=130 Identities=11% Similarity=0.128 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... .+..+.+..- ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 39 ia~~l~~~G~~V~~~~r~~~~---~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 114 (285)
T 2p91_A 39 IAKSFHREGAQLAFTYATPKL---EKRVREIAKG-FGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEE 114 (285)
T ss_dssp HHHHHHHTTCEEEEEESSGGG---HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGG
T ss_pred HHHHHHHcCCEEEEEeCCHHH---HHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccc
Confidence 478899999999999997531 1122222111 1247899999999999888876 7899999998531
Q ss_pred --------------------hhhHHHHHHHHHHhCCc---ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 --------------------FLDQLEIVHAIKVAGNI---KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag~V---kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++...- . .|+|. |+.+.... ..+...|..+|..++.+.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la 189 (285)
T 2p91_A 115 FKGGVIDTSREGFKIAMDISVYSLIALTRELLPLM-EGRNGAIVTLSYYGAEKV----VPHYNVMGIAKAALESTVRYLA 189 (285)
T ss_dssp GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGG-TTSCCEEEEEECGGGTSB----CTTTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHcCCEEEEEccchhccC----CCCccHHHHHHHHHHHHHHHHH
Confidence 235667778776653 2 57774 43222111 11234677899988876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 190 ~e~~~~gi~v~~v~PG~v~t 209 (285)
T 2p91_A 190 YDIAKHGHRINAISAGPVKT 209 (285)
T ss_dssp HHHHTTTCEEEEEEECCCCC
T ss_pred HHhcccCcEEEEEEeCcccC
Confidence 589999999998754
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.69 E-value=3.6e-07 Score=75.14 Aligned_cols=120 Identities=11% Similarity=0.115 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+++|+.... ...++.+.+|++|.+++.++++ ++|+|||+++...
T Consensus 30 ia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 96 (269)
T 3vtz_A 30 VVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSP 96 (269)
T ss_dssp HHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 4788999999999999975421 1357789999999999888876 7899999998641
Q ss_pred ----------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..+++++ +++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e 170 (269)
T 3vtz_A 97 LHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAAT-----KNAAAYVTSKHALLGLTRSVAID 170 (269)
T ss_dssp GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC-----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-----CCChhHHHHHHHHHHHHHHHHHH
Confidence 2344555555 44466 678774 33 222111 1234677999998877653
Q ss_pred --cCCCEEEEeccccch
Q 026978 125 --AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --~gl~~tilr~g~~~~ 139 (230)
.++....|+||+...
T Consensus 171 ~~~~i~vn~v~PG~v~T 187 (269)
T 3vtz_A 171 YAPKIRCNAVCPGTIMT 187 (269)
T ss_dssp HTTTEEEEEEEECSBCC
T ss_pred hcCCCEEEEEEECCCcC
Confidence 378889999998764
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.69 E-value=9.7e-08 Score=67.95 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=65.6
Q ss_pred CHHHHhhCC-CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSG-HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g-~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|++.| ++|++++|+. ++.+ .+...+++++.+|+.|.+++.++++++|+||++++. ....++++
T Consensus 20 ~~~~l~~~g~~~v~~~~r~~------~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~---~~~~~~~~ 87 (118)
T 3ic5_A 20 IAALLKTSSNYSVTVADHDL------AALA---VLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF---FLTPIIAK 87 (118)
T ss_dssp HHHHHHHCSSEEEEEEESCH------HHHH---HHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG---GGHHHHHH
T ss_pred HHHHHHhCCCceEEEEeCCH------HHHH---HHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc---hhhHHHHH
Confidence 367888999 9999999963 3333 233568999999999999999999999999999954 45689999
Q ss_pred HHHHhCCcceEecc
Q 026978 80 AIKVAGNIKRFLPS 93 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S 93 (230)
+|.++| +++|..+
T Consensus 88 ~~~~~g-~~~~~~~ 100 (118)
T 3ic5_A 88 AAKAAG-AHYFDLT 100 (118)
T ss_dssp HHHHTT-CEEECCC
T ss_pred HHHHhC-CCEEEec
Confidence 999999 8888654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=2e-07 Score=75.12 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=83.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|.+++|+.. +.+.+. .+ ..++.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 19 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~ 91 (235)
T 3l6e_A 19 LTIGLVERGHQVSMMGRRYQ------RLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFG 91 (235)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC---
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCC
Confidence 47889999999999999743 222221 22 2368999999999999888776 679999999864
Q ss_pred ----------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ----------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
|+.+..++++++. +.+ .++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~la~ 164 (235)
T 3l6e_A 92 PVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGK-----ANESLYCASKWGMRGFLESLRA 164 (235)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSC-----SSHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCC-----CCCcHHHHHHHHHHHHHHHHHH
Confidence 1234555566553 334 26663 33 332211 1234677999998876653
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 165 e~~~~gi~v~~v~PG~v~ 182 (235)
T 3l6e_A 165 ELKDSPLRLVNLYPSGIR 182 (235)
T ss_dssp HTTTSSEEEEEEEEEEEC
T ss_pred HhhccCCEEEEEeCCCcc
Confidence 57889999998764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-07 Score=78.54 Aligned_cols=127 Identities=12% Similarity=0.167 Sum_probs=86.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCC-----CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGI-----GVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~-----gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|.+++|+... .+. .+.+... .+.++.+|++|.+++.++++ ++|+|||+++
T Consensus 27 ia~~l~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 27 VAAGLVAAGASVMIVGRNPDK------LAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHHHTTCEEEEEESCHHH------HHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 478899999999999997432 111 1122221 57889999999999888876 6799999998
Q ss_pred CC--------------------ChhhHHHHHHHHHHh----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 68 YP--------------------QFLDQLEIVHAIKVA----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 68 ~~--------------------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
.. ++.+..++++++... + -.++|. |+ .+.... .+...|..+|..++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~l 174 (281)
T 3svt_A 101 GSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTH-----RWFGAYGVTKSAVDHL 174 (281)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCC-----TTCTHHHHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCC-----CCChhHHHHHHHHHHH
Confidence 62 133556666666543 3 347774 33 222111 1234688999998877
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .|+....|+||+...
T Consensus 175 ~~~la~e~~~~gi~vn~v~PG~v~t 199 (281)
T 3svt_A 175 MQLAADELGASWVRVNSIRPGLIRT 199 (281)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHhhhcCeEEEEEEeCcCcC
Confidence 653 579999999998764
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.68 E-value=2e-07 Score=76.93 Aligned_cols=127 Identities=12% Similarity=0.133 Sum_probs=84.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+++|+.. +.+.+ ..+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 44 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~ 116 (272)
T 4dyv_A 44 VAVALAGAGYGVALAGRRLD------ALQETAAEI-GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPA 116 (272)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 47889999999999999742 22222 123 3578999999999999988887 8999999998631
Q ss_pred ------------------hhhHHHHHHHHH----HhCC-cceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 ------------------FLDQLEIVHAIK----VAGN-IKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~----~ag~-Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++. +.+. -.++|. |..+... ..+...|..+|..++.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~l 191 (272)
T 4dyv_A 117 IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----RPYSAPYTATKHAITGLTKST 191 (272)
T ss_dssp SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----CTTCHHHHHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----CCCchHHHHHHHHHHHHHHHH
Confidence 234445555543 3320 146664 3333211 11234677999988877653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 192 a~e~~~~gI~vn~v~PG~v~T 212 (272)
T 4dyv_A 192 SLDGRVHDIACGQIDIGNADT 212 (272)
T ss_dssp HHHHGGGTEEEEEEEEEECC-
T ss_pred HHHhCccCEEEEEEEECcccC
Confidence 589999999987754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-07 Score=76.12 Aligned_cols=128 Identities=16% Similarity=0.175 Sum_probs=81.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+++|+.. +.+.+. .+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 25 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 97 (261)
T 3n74_A 25 MAKRFAKGGAKVVIVDRDKA------GAERVAGEI-GDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP 97 (261)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCC
Confidence 47899999999999999743 222222 22 3568999999999999888877 7899999998531
Q ss_pred ------------------hhhHHHHHHHHHHhC-------CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 ------------------FLDQLEIVHAIKVAG-------NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~ag-------~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++...- ...++|. |+.+... +......|..+|...+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asKaa~~~~~~~ 173 (261)
T 3n74_A 98 QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----PRPNLAWYNATKGWVVSVTKA 173 (261)
T ss_dssp CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----CCCCccHHHHHHHHHHHHHHH
Confidence 224445555543321 0124653 3322111 111234577899988876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 174 la~e~~~~gi~v~~v~PG~v~t 195 (261)
T 3n74_A 174 LAIELAPAKIRVVALNPVAGET 195 (261)
T ss_dssp HHHHHGGGTEEEEEEEEC----
T ss_pred HHHHhhhcCcEEEEEecCcccC
Confidence 589999999988654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-07 Score=76.83 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|++++|+..... + ....+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 48 ia~~la~~G~~V~~~~r~~~~~~---~--~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~ 122 (276)
T 3r1i_A 48 VALAYAEAGAQVAVAARHSDALQ---V--VADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV 122 (276)
T ss_dssp HHHHHHHTTCEEEEEESSGGGGH---H--HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH---H--HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 47899999999999999753211 1 111221 2368899999999999998887 8899999998641
Q ss_pred ------------------hhhHHHHHHHHH----HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIVHAIK----VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~----~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++. +.+.-.++|. |..|...... .+...|..+|..++.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~---~~~~~Y~asKaa~~~l~~~la 199 (276)
T 3r1i_A 123 QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP---QQVSHYCTSKAAVVHLTKAMA 199 (276)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---SCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---CCcchHHHHHHHHHHHHHHHH
Confidence 234455555543 3431145663 3333211110 1234678999988876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 200 ~e~~~~gIrvn~v~PG~v~T 219 (276)
T 3r1i_A 200 VELAPHQIRVNSVSPGYIRT 219 (276)
T ss_dssp HHHGGGTEEEEEEEECCBCS
T ss_pred HHHhhcCcEEEEEeeCCCcC
Confidence 589999999998754
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.68 E-value=8.5e-08 Score=79.04 Aligned_cols=128 Identities=12% Similarity=0.192 Sum_probs=86.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 42 ia~~la~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 42 MAEGLAVAGARILINGTDPS------RVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQF 115 (271)
T ss_dssp HHHHHHHTTCEEEECCSCHH------HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
Confidence 47899999999999998743 2111 12222 2468899999999999988887 7899999998641
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++ ++.+ ..++|. |+...... ..+...|..+|..++.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~----~~~~~~Y~asKaa~~~l~~~la 190 (271)
T 4ibo_A 116 RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELA----RATVAPYTVAKGGIKMLTRAMA 190 (271)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCC----CCCchhHHHHHHHHHHHHHHHH
Confidence 23445554444 4456 567774 33221111 11235678999888876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 191 ~e~~~~gI~vn~v~PG~v~T 210 (271)
T 4ibo_A 191 AEWAQYGIQANAIGPGYMLT 210 (271)
T ss_dssp HHHGGGTEEEEEEEECSBCS
T ss_pred HHHhhhCeEEEEEEeccEeC
Confidence 589999999998764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.7e-07 Score=78.41 Aligned_cols=128 Identities=15% Similarity=0.120 Sum_probs=86.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 47 la~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 47 TATEFARRGARLVLSDVDQP------ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV 120 (301)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence 47899999999999999743 2211 11222 2468899999999999988876 789999999863
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+...++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~l 195 (301)
T 3tjr_A 121 AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----NAGLGTYGVAKYGVVGLAETL 195 (301)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----CCCchHHHHHHHHHHHHHHHH
Confidence 123556666665 33331246663 33 33211 11234677999988776543
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 196 a~e~~~~gi~v~~v~PG~v~T 216 (301)
T 3tjr_A 196 AREVKPNGIGVSVLCPMVVET 216 (301)
T ss_dssp HHHHGGGTEEEEEECCSCCCS
T ss_pred HHHhcccCcEEEEEECCcccc
Confidence 589999999998754
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=7e-08 Score=78.92 Aligned_cols=128 Identities=16% Similarity=0.172 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEE-EcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVY-ARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++ .|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 20 ia~~l~~~G~~vv~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 20 AAIRLAENGYNIVINYARSKK------AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASG 93 (258)
T ss_dssp HHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 478999999999987 66532 21111 1222 2468899999999999888776 569999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ ..++|. |+.+... +..+...|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~----~~~~~~~Y~asKaa~~~l~~~l 168 (258)
T 3oid_A 94 VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIR----YLENYTTVGVSKAALEALTRYL 168 (258)
T ss_dssp CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTS----BCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCC----CCCCcHHHHHHHHHHHHHHHHH
Confidence 123455566665 4555 568774 3322211 111235677999998877653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 169 a~e~~~~gi~vn~v~PG~v~T 189 (258)
T 3oid_A 169 AVELSPKQIIVNAVSGGAIDT 189 (258)
T ss_dssp HHHTGGGTEEEEEEEECCBCS
T ss_pred HHHHhhcCcEEEEEeeCCCcC
Confidence 489999999998754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-07 Score=77.89 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--C---CeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--I---GVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~---gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|++++|+.. +.+.+ ..+.. . .+.++.+|++|.+++.++++ ++|+|||+++
T Consensus 42 ia~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 42 AAVIFAKEGAQVTITGRNED------RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAG 115 (297)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 47889999999999999742 22211 12211 1 58899999999999988876 7899999998
Q ss_pred CCC---------------------hhhHHHHHHHHHHhCCc---ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 68 YPQ---------------------FLDQLEIVHAIKVAGNI---KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 68 ~~~---------------------~~~~~~ll~Aa~~ag~V---kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
... +.+..++++++...- . .++|. |+ .+..... .+...|..+|..++.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~~g~IV~isS~~~~~~~~----~~~~~Y~asKaa~~~l 190 (297)
T 1xhl_A 116 ANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVAGPQAH----SGYPYYACAKAALDQY 190 (297)
T ss_dssp CCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHTTCEEEEECCGGGSSSCC----TTSHHHHHHHHHHHHH
T ss_pred cCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHH-HhcCCEEEEEcCchhccCCC----CCcchHHHHHHHHHHH
Confidence 521 223456666655431 1 57764 43 2321110 1234677899988776
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .|+.++.|+||++..
T Consensus 191 ~~~la~el~~~gI~v~~v~PG~v~T 215 (297)
T 1xhl_A 191 TRCTAIDLIQHGVRVNSVSPGAVAT 215 (297)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred HHHHHHHhcccCeEEEEEeeCCCcC
Confidence 653 589999999998764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-07 Score=77.54 Aligned_cols=126 Identities=15% Similarity=0.215 Sum_probs=84.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.+++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 27 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 100 (264)
T 3ucx_A 27 LARRCAEQGADLVLAARTVE------RLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVP 100 (264)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCC
T ss_pred HHHHHHHCcCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 47889999999999999743 22211 1221 2468899999999999888876 789999999753
Q ss_pred -------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
++.+..++++++.. .+ .++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~ 173 (264)
T 3ucx_A 101 SMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQ-----AKYGAYKMAKSALLAMSQT 173 (264)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCC-----CccHHHHHHHHHHHHHHHH
Confidence 12345566665543 33 46663 33 332211 1234677899888876543
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 174 la~e~~~~gi~vn~v~PG~v~t 195 (264)
T 3ucx_A 174 LATELGEKGIRVNSVLPGYIWG 195 (264)
T ss_dssp HHHHHHTTTCEEEEEEESSCBS
T ss_pred HHHHhCccCeEEEEEecCcccc
Confidence 689999999998754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=8.9e-08 Score=79.07 Aligned_cols=131 Identities=8% Similarity=0.061 Sum_probs=86.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|+..... +..+.+.......+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 43 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 120 (277)
T 4fc7_A 43 IAEIFMRHGCHTVIASRSLPRVL--TAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP 120 (277)
T ss_dssp HHHHHHTTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCC
Confidence 47889999999999999743210 00111111113468899999999999888876 789999999853
Q ss_pred ---------------ChhhHHHHHHHH----HHhCCcceEec-c-cccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ---------------QFLDQLEIVHAI----KVAGNIKRFLP-S-EFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ---------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S-~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++ ++.+ ..++|. | ..+.... .....|..+|..++.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e 194 (277)
T 4fc7_A 121 AGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQ-----ALQVHAGSAKAAVDAMTRHLAVE 194 (277)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTC-----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC-----CCcHHHHHHHHHHHHHHHHHHHH
Confidence 134566666665 3344 467764 3 3332211 1234677899888876653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 195 ~~~~gi~vn~v~PG~v~t 212 (277)
T 4fc7_A 195 WGPQNIRVNSLAPGPISG 212 (277)
T ss_dssp HGGGTEEEEEEEECCBSS
T ss_pred hhhcCeEEEEEEECCEec
Confidence 589999999998763
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.6e-07 Score=75.08 Aligned_cols=133 Identities=13% Similarity=0.131 Sum_probs=87.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-CcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+++|+..... ..++.+. .+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 25 IAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 47889999999999999865321 0001111 11121 3458899999999999888877 889999999864
Q ss_pred C-------------------hhhHHHHHHHHHHh----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQLEIVHAIKVA----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa~~a----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+..++++++... + ..++|. |+ .+..... .+...|..+|..++.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----~~~~~Y~asKaal~~~~~~ 179 (285)
T 3sc4_A 105 NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKW----LRPTPYMMAKYGMTLCALG 179 (285)
T ss_dssp CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGG----SCSHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCC----CCCchHHHHHHHHHHHHHH
Confidence 1 23556666766543 4 467774 33 3321110 1224677999988876653
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 180 la~e~~~~gI~vn~v~PG~~v 200 (285)
T 3sc4_A 180 IAEELRDAGIASNTLWPRTTV 200 (285)
T ss_dssp HHHHTGGGTCEEEEEECSSCB
T ss_pred HHHHhcccCcEEEEEeCCCcc
Confidence 68999999999644
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.8e-07 Score=76.49 Aligned_cols=131 Identities=8% Similarity=0.137 Sum_probs=87.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+... .+..+.+..- ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~---~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 101 (261)
T 2wyu_A 26 IAAKLKEAGAEVALSYQAERL---RPEAEKLAEA-LGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREA 101 (261)
T ss_dssp HHHHHHHHTCEEEEEESCGGG---HHHHHHHHHH-TTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEcCCHHH---HHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccc
Confidence 478899999999999997531 1122222111 1247899999999999988877 7899999998531
Q ss_pred --------------------hhhHHHHHHHHHHhCC-cceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 --------------------FLDQLEIVHAIKVAGN-IKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag~-Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++...-. -.|+|. |+.+.... ..+...|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e 177 (261)
T 2wyu_A 102 MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV----VPKYNVMAIAKAALEASVRYLAYE 177 (261)
T ss_dssp HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC----CCCchHHHHHHHHHHHHHHHHHHH
Confidence 2356677787766410 136664 43222111 11234677899998877653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 178 ~~~~gi~v~~v~Pg~v~t 195 (261)
T 2wyu_A 178 LGPKGVRVNAISAGPVRT 195 (261)
T ss_dssp HGGGTCEEEEEEECCCCC
T ss_pred HhhhCcEEEEEeeCCCcC
Confidence 489999999998764
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.66 E-value=1.6e-07 Score=77.79 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=82.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hh---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEc-CCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIEGELDEHKKIVSILK-------EVDVVIST-VAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~-~~~ 68 (230)
++++|+++|++|++++|+.. +.+.+. .+ ....++++.+|++|.+++.++++ ++|+|||+ ++.
T Consensus 44 la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~ 117 (286)
T 1xu9_A 44 MAYHLAKMGAHVVVTARSKE------TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN 117 (286)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 47889999999999999743 222111 11 11258899999999998888776 79999999 453
Q ss_pred C------------------ChhhHHHHHHHHHHh---CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 69 P------------------QFLDQLEIVHAIKVA---GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 69 ~------------------~~~~~~~ll~Aa~~a---g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
. ++.+..++++++... + .+++|. |+ .|... ..+...|..+|...+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l 191 (286)
T 1xu9_A 118 TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVA-----YPMVAAYSASKFALDGFFSSI 191 (286)
T ss_dssp CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSC-----CTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccC-----CCCccHHHHHHHHHHHHHHHH
Confidence 2 123555666665432 2 257764 33 33211 11234677899887765532
Q ss_pred --------cCCCEEEEeccccch
Q 026978 125 --------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 --------~gl~~tilr~g~~~~ 139 (230)
.++.++.++||+...
T Consensus 192 ~~e~~~~~~~i~v~~v~Pg~v~t 214 (286)
T 1xu9_A 192 RKEYSVSRVNVSITLCVLGLIDT 214 (286)
T ss_dssp HHHHHHHTCCCEEEEEEECCBCC
T ss_pred HHHHhhcCCCeEEEEeecCccCC
Confidence 489999999998754
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.66 E-value=1e-07 Score=78.26 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|+++.|+..... +-.+.+.......+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 36 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 113 (266)
T 4egf_A 36 IARAFAAAGARLVLSGRDVSELD--AARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP 113 (266)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 47889999999999999743210 00111111113568899999999998887776 7899999998641
Q ss_pred ----------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++. +.+.-.++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 114 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~l~~~la~e 188 (266)
T 4egf_A 114 VVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----LPDHYAYCTSKAGLVMATKVLARE 188 (266)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----CCCChHHHHHHHHHHHHHHHHHHH
Confidence 234455555553 3331246664 33 33211 11234677999988876553
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 189 ~~~~gI~vn~v~PG~v~T 206 (266)
T 4egf_A 189 LGPHGIRANSVCPTVVLT 206 (266)
T ss_dssp HGGGTEEEEEEEESCBCS
T ss_pred HhhhCeEEEEEEeCCCcC
Confidence 589999999998754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-07 Score=77.82 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=87.6
Q ss_pred CHHHHhh-CCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVS-SGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~-~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|++ +|++|++++|+.. +.+. .+.+. ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 20 ~a~~L~~~~g~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 20 IVRDLCRLFSGDVVLTARDVT------RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHHHHSSSEEEEEESSHH------HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHhcCCeEEEEeCChH------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence 4788999 9999999999743 1111 11221 2458899999999999998887 899999999853
Q ss_pred -------------------ChhhHHHHHHHHHHhCCc--ceEec-cc-ccc---cC--------------C---------
Q 026978 70 -------------------QFLDQLEIVHAIKVAGNI--KRFLP-SE-FGC---EE--------------D--------- 100 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag~V--kr~v~-S~-~g~---~~--------------~--------- 100 (230)
++.+..++++++.... . .|+|. |+ .+. .. .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 172 (276)
T 1wma_A 94 FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI-KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMN 172 (276)
T ss_dssp CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHH
T ss_pred ccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhh-CCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhh
Confidence 1235677888887763 2 37764 33 111 00 0
Q ss_pred ----------CCCCCCchhHHHHHHHHHHHHHHH-----------cCCCEEEEeccccch
Q 026978 101 ----------KVRPLPPFEAYLEKKRIVRRAIEA-----------AQIPYTFVSANLCGA 139 (230)
Q Consensus 101 ----------~~~~~~p~~~~~~~K~~~e~~l~~-----------~gl~~tilr~g~~~~ 139 (230)
...+..|...|..+|...+.+.+. .|+..+.|+||+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t 232 (276)
T 1wma_A 173 KFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT 232 (276)
T ss_dssp HHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred hhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence 000011335688999888776542 489999999998653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.4e-07 Score=78.64 Aligned_cols=130 Identities=13% Similarity=0.123 Sum_probs=88.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-h--cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-F--QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l--~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|+... .+.+.+.. + ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 65 ia~~la~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 140 (294)
T 3r3s_A 65 AAIAYAREGADVAINYLPAEE----EDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQT 140 (294)
T ss_dssp HHHHHHHTTCEEEEECCGGGH----HHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcch----hHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence 478999999999999886321 11111111 1 13468889999999998887765 789999999853
Q ss_pred -------------------ChhhHHHHHHHHHHhCCcc--eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -------------------QFLDQLEIVHAIKVAGNIK--RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag~Vk--r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
|+.+..++++++...- .+ ++|. |+ .+... ......|..+|..++.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la 214 (294)
T 3r3s_A 141 AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQP-----SPHLLDYAATKAAILNYSRGLA 214 (294)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccC-----CCCchHHHHHHHHHHHHHHHHH
Confidence 1345677888887654 34 6764 33 22211 11234677999988876653
Q ss_pred -----cCCCEEEEeccccchh
Q 026978 125 -----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 215 ~e~~~~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 215 KQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_dssp HHHGGGTCEEEEEEECSBCSH
T ss_pred HHHhhcCeEEEEEecCcCccc
Confidence 5899999999988643
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=4.1e-07 Score=73.45 Aligned_cols=127 Identities=13% Similarity=0.183 Sum_probs=85.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.|+... .+.+ ..++ ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 21 ~a~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 21 VAHALASKGATVVGTATSQAS------AEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITR 94 (247)
T ss_dssp HHHHHHHTTCEEEEEESSHHH------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478999999999999997432 1111 1221 2468899999999999888776 5799999998641
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++ ++.+ ..++|. |..+.... .+...|..+|...+.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 168 (247)
T 3lyl_A 95 DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGN-----PGQTNYCAAKAGVIGFSKSL 168 (247)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-----CCcHHHHHHHHHHHHHHHHH
Confidence 23455555554 3455 567764 33332211 1234677999987776653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 169 a~e~~~~gi~v~~v~PG~v~t 189 (247)
T 3lyl_A 169 AYEVASRNITVNVVAPGFIAT 189 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHcCeEEEEEeeCcEec
Confidence 589999999998754
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.8e-07 Score=75.13 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=86.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+++|+.. +.+.+. .+ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 24 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 96 (255)
T 4eso_A 24 TVRRLVEGGAEVLLTGRNES------NIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE 96 (255)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 47889999999999999742 222222 22 3468899999999998887665 7899999998641
Q ss_pred -----------------hhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 71 -----------------FLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
+.+..++++++...- .-.++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~ 171 (255)
T 4eso_A 97 PFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----HPGMSVYSASKAALVSFASVLAAELL 171 (255)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----CTTBHHHHHHHHHHHHHHHHHHHHTG
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----CCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 235666777776531 0135653 33 22211 11234677999988876653
Q ss_pred -cCCCEEEEeccccch
Q 026978 125 -AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 172 ~~gi~vn~v~PG~v~T 187 (255)
T 4eso_A 172 PRGIRVNSVSPGFIDT 187 (255)
T ss_dssp GGTCEEEEEEECSBCC
T ss_pred hhCcEEEEEecCcccC
Confidence 489999999998753
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3e-07 Score=75.52 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=88.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|.... +.+.+ ..++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 34 ia~~l~~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 108 (270)
T 3is3_A 34 VAVHLGRLGAKVVVNYANSTK-----DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS 108 (270)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999998875421 11111 1221 3458899999999999888876 689999999864
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcc--eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIK--RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vk--r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
|+.+..++++++...- .+ ++|. |+ .+... +..+...|..+|..++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~----~~~~~~~Y~asKaa~~~~~~~la~ 183 (270)
T 3is3_A 109 FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSSNTSKDF----SVPKHSLYSGSKGAVDSFVRIFSK 183 (270)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECCTTTTTC----CCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeCchhccC----CCCCCchhHHHHHHHHHHHHHHHH
Confidence 1346677888887764 33 6664 33 21111 111334677999988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 184 e~~~~gi~vn~v~PG~v~T 202 (270)
T 3is3_A 184 DCGDKKITVNAVAPGGTVT 202 (270)
T ss_dssp HHGGGTCEEEEEEECSBCS
T ss_pred HhcccCeEEEEEEeCCccC
Confidence 589999999998754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.6e-07 Score=75.23 Aligned_cols=129 Identities=12% Similarity=0.172 Sum_probs=87.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|+.|.++.|.... +.+.+ ..++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 47 ia~~la~~G~~V~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 121 (271)
T 3v2g_A 47 IAKRLALEGAAVALTYVNAAE-----RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH 121 (271)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCHH-----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 478999999999999776421 21111 1222 2457889999999999988877 889999999863
Q ss_pred ------------------ChhhHHHHHHHHHHh--CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKVA--GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a--g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++... . -.++|. |..+... +..+...|..+|..++.+.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-~g~iv~isS~~~~~~----~~~~~~~Y~asKaa~~~l~~~la~ 196 (271)
T 3v2g_A 122 SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-GGRIITIGSNLAELV----PWPGISLYSASKAALAGLTKGLAR 196 (271)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEECCGGGTCC----CSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEeChhhccC----CCCCchHHHHHHHHHHHHHHHHHH
Confidence 134567778887764 2 356663 3333211 111234677999988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 197 e~~~~gIrvn~v~PG~v~T 215 (271)
T 3v2g_A 197 DLGPRGITVNIVHPGSTDT 215 (271)
T ss_dssp HHGGGTCEEEEEEECSBCS
T ss_pred HhhhhCeEEEEEecCCCcC
Confidence 589999999998754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=8.9e-07 Score=71.84 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC-CHHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD-EHKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~-d~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
++++|+++|++|++++|+.. + ++.+ ..+.++ +|+. +.+.+.+.+.++|+|||+++...
T Consensus 35 ~a~~l~~~G~~V~~~~r~~~------~---~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~ 102 (249)
T 1o5i_A 35 VADVLSQEGAEVTICARNEE------L---LKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTN 102 (249)
T ss_dssp HHHHHHHTTCEEEEEESCHH------H---HHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCH
T ss_pred HHHHHHHCCCEEEEEcCCHH------H---HHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCH
Confidence 47889999999999999731 1 1223 246677 9994 45666666669999999998531
Q ss_pred ----------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCC
Q 026978 71 ----------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIP 128 (230)
Q Consensus 71 ----------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~ 128 (230)
+.+ .+.++..+++.+ .+++|. |+...... ..+...|..+|..++.+.+. .|+.
T Consensus 103 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (249)
T 1o5i_A 103 EDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP----IENLYTSNSARMALTGFLKTLSFEVAPYGIT 177 (249)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCC----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 112 345677777888 789875 43222111 11234677899888776543 5899
Q ss_pred EEEEeccccchh
Q 026978 129 YTFVSANLCGAY 140 (230)
Q Consensus 129 ~tilr~g~~~~~ 140 (230)
++.|+||++...
T Consensus 178 v~~v~Pg~v~t~ 189 (249)
T 1o5i_A 178 VNCVAPGWTETE 189 (249)
T ss_dssp EEEEEECSBCCT
T ss_pred EEEEeeCCCccC
Confidence 999999987653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.2e-07 Score=77.35 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=88.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|+++.|+.... .+.+.. ++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 63 ia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 137 (291)
T 3ijr_A 63 VSIAFAKEGANIAIAYLDEEGD-----ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQY 137 (291)
T ss_dssp HHHHHHHTTCEEEEEESSCHHH-----HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCchHH-----HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence 4788999999999999975321 111111 11 2467889999999999888776 789999998853
Q ss_pred -------------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 -------------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++...- .-.++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~ 212 (291)
T 3ijr_A 138 PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----ETLIDYSATKGAIVAFTRSLSQ 212 (291)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----CCChhHHHHHHHHHHHHHHHHH
Confidence 1345677888887642 0246663 33 222111 1234677999988876653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+....|+||+....
T Consensus 213 e~~~~gi~vn~v~PG~v~T~ 232 (291)
T 3ijr_A 213 SLVQKGIRVNGVAPGPIWTP 232 (291)
T ss_dssp HHGGGTCEEEEEEECSBCST
T ss_pred HHhhcCEEEEEEeeCCCcCC
Confidence 4899999999987643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-07 Score=78.02 Aligned_cols=127 Identities=8% Similarity=0.024 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~--- 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+ ...+.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 22 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 94 (263)
T 2a4k_A 22 ALDLFAREGASLVAVDREER------LLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA 94 (263)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTT
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC
Confidence 47889999999999999742 22221 122 2468899999999999888776 469999999853
Q ss_pred ----------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 70 ----------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
++.+..++++++...- ...++|. |+ .+. . ..+...|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~-----~~~~~~Y~asK~a~~~~~~~la~e~~ 168 (263)
T 2a4k_A 95 LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-G-----AFGLAHYAAGKLGVVGLARTLALELA 168 (263)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-C-----HHHHHHHHHCSSHHHHHHHHHHHHHT
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-C-----CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 1335667777776642 0246764 33 222 1 01223566888877665543
Q ss_pred -cCCCEEEEeccccchh
Q 026978 125 -AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 -~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||++...
T Consensus 169 ~~gi~v~~v~PG~v~t~ 185 (263)
T 2a4k_A 169 RKGVRVNVLLPGLIQTP 185 (263)
T ss_dssp TTTCEEEEEEECSBCCG
T ss_pred hhCcEEEEEEeCcCcCc
Confidence 5899999999987643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-07 Score=77.18 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC------CcchHhhh-hhh--cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS------RPSKLEIH-KEF--QGIGVTIIEGELDEHKKIVSILK-------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~------~p~k~~~l-~~l--~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~ 64 (230)
++++|+++|++|+++.|+..... .+++.+.. ..+ ....+.++.+|++|.+++.++++ ++|+|||
T Consensus 29 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 108 (278)
T 3sx2_A 29 HAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVA 108 (278)
T ss_dssp HHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47889999999999998732100 01111111 111 13468899999999999988887 7899999
Q ss_pred cCCCCC---------------hhhHHHHHHHHH----HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 65 TVAYPQ---------------FLDQLEIVHAIK----VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 65 ~~~~~~---------------~~~~~~ll~Aa~----~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+++... +.+..++++++. +.+.-.++|. |..+.... ..+..+...|..+|..++.+.+
T Consensus 109 nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~~~~~Y~asKaa~~~~~~ 187 (278)
T 3sx2_A 109 NAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV-GSADPGSVGYVAAKHGVVGLMR 187 (278)
T ss_dssp CCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-CCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC-ccCCCCchHhHHHHHHHHHHHH
Confidence 998641 335566666653 3321246663 33332111 0111123457789998887665
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+....|+||+...
T Consensus 188 ~la~e~~~~gi~vn~v~PG~v~T 210 (278)
T 3sx2_A 188 VYANLLAGQMIRVNSIHPSGVET 210 (278)
T ss_dssp HHHHHHGGGTEEEEEEEESCBSS
T ss_pred HHHHHHhccCcEEEEEecCCccC
Confidence 3 579999999998754
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=2.8e-07 Score=75.43 Aligned_cols=129 Identities=10% Similarity=0.067 Sum_probs=86.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+. .. .+..+.+..- ..+..++.+|++|.+++.++++ ++|+|||+++...
T Consensus 27 ia~~l~~~G~~V~~~~r~~-~~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 102 (265)
T 1qsg_A 27 IAQAMHREGAELAFTYQND-KL--KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQ 102 (265)
T ss_dssp HHHHHHHTTCEEEEEESST-TT--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGG
T ss_pred HHHHHHHCCCEEEEEcCcH-HH--HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccc
Confidence 4788999999999999986 21 1122222111 1245789999999999988876 6899999998531
Q ss_pred ---------------------hhhHHHHHHHHHHhCCc--ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 ---------------------FLDQLEIVHAIKVAGNI--KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~ag~V--kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++...- . .|+|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 176 (265)
T 1qsg_A 103 LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML-NPGSALLTLSYLGAERAI-----PNYNVMGLAKASLEANVRYM 176 (265)
T ss_dssp GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEECGGGTSBC-----TTTTHHHHHHHHHHHHHHHH
T ss_pred cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-ccCCEEEEEcchhhccCC-----CCchHHHHHHHHHHHHHHHH
Confidence 234566777776642 2 36664 33 222111 1234677899998877653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 177 a~e~~~~gi~v~~v~PG~v~t 197 (265)
T 1qsg_A 177 ANAMGPEGVRVNAISAGPIRT 197 (265)
T ss_dssp HHHHTTTTEEEEEEEECCCCC
T ss_pred HHHhhhcCeEEEEEEeCCCcc
Confidence 489999999998754
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.6e-07 Score=77.40 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=86.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|+.. +.+.+ ..+. ...+..+.+|++|.+++.++++ ++|+|||+++..
T Consensus 44 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 44 IALELARRGAMVIGTATTEA------GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQ 117 (270)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 22211 1121 2457889999999999888877 789999999863
Q ss_pred ------------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++. +.+ -.++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~l 191 (270)
T 3ftp_A 118 DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGN-----PGQVNYAAAKAGVAGMTRAL 191 (270)
T ss_dssp CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTBHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC-----CCchhHHHHHHHHHHHHHHH
Confidence 1235566666653 445 467764 33 332111 1234677999988776553
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 192 a~e~~~~gI~vn~v~PG~v~T 212 (270)
T 3ftp_A 192 AREIGSRGITVNCVAPGFIDT 212 (270)
T ss_dssp HHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHhhhCeEEEEEEeCCCcC
Confidence 589999999998754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-07 Score=76.48 Aligned_cols=128 Identities=12% Similarity=0.102 Sum_probs=85.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++++... ++.+ ..+.+. ...++++.+|++|.+++.++++ ++|+|||+++...
T Consensus 42 la~~l~~~G~~v~i~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~ 116 (267)
T 4iiu_A 42 IARQLAADGFNIGVHYHRDA-----AGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIAR 116 (267)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCch-----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC
Confidence 47899999999988775432 1111 111221 3468999999999999988877 7899999998641
Q ss_pred -------------------hhhHHHHHHHHH-----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 -------------------FLDQLEIVHAIK-----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~-----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++. +.+ ..++|. |+ .+.... .+...|..+|...+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~ 190 (267)
T 4iiu_A 117 DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGN-----RGQVNYSAAKAGIIGATKA 190 (267)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCC-----CCCchhHHHHHHHHHHHHH
Confidence 235566777663 445 577774 33 222111 1234677899877765543
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 191 la~e~~~~gi~v~~v~PG~v~t 212 (267)
T 4iiu_A 191 LAIELAKRKITVNCIAPGLIDT 212 (267)
T ss_dssp HHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHhhcCeEEEEEEEeeecC
Confidence 589999999998754
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-07 Score=76.40 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=81.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC----CEEEEcCCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV----DVVISTVAYPQ------ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~----D~Vi~~~~~~~------ 70 (230)
++++|+++|++|++++|+... +.. . +.+|++|.+++.++++.+ |+|||+++...
T Consensus 17 ~a~~l~~~G~~V~~~~r~~~~------------~~~---~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~ 80 (257)
T 1fjh_A 17 TRKVLEAAGHQIVGIDIRDAE------------VIA---D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG 80 (257)
T ss_dssp HHHHHHHTTCEEEEEESSSSS------------EEC---C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHH
T ss_pred HHHHHHHCCCEEEEEeCCchh------------hcc---c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHH
Confidence 478899999999999997532 111 1 678999999999998654 99999998643
Q ss_pred ------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCC-----------------------CCCCCchhHHHHHH
Q 026978 71 ------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDK-----------------------VRPLPPFEAYLEKK 115 (230)
Q Consensus 71 ------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~-----------------------~~~~~p~~~~~~~K 115 (230)
+.+..++++++. +.+ ..|+|. |+ .+..... ..+..+...|..+|
T Consensus 81 ~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 159 (257)
T 1fjh_A 81 NVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK 159 (257)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHH
Confidence 345666666664 456 678874 33 2220000 01111234577899
Q ss_pred HHHHHHHHH-------cCCCEEEEeccccchh
Q 026978 116 RIVRRAIEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 116 ~~~e~~l~~-------~gl~~tilr~g~~~~~ 140 (230)
...+.+.+. .|+.++.|+||++...
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 191 (257)
T 1fjh_A 160 NALTVAVRKRAAAWGEAGVRLNTIAPGATETP 191 (257)
T ss_dssp HHHHHHHHHTHHHHHHTTCEEEEEEECC----
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCc
Confidence 998877653 5899999999987643
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.61 E-value=4.2e-07 Score=73.87 Aligned_cols=131 Identities=13% Similarity=0.084 Sum_probs=84.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh--cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l--~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|.+++|+..... +-.+.+... ....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~ 100 (250)
T 3nyw_A 23 IAAGLATDGYRVVLIARSKQNLE--KVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD 100 (250)
T ss_dssp HHHHHHHHTCEEEEEESCHHHHH--HHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 47889999999999999743210 001111111 11568899999999998888776 689999999863
Q ss_pred ----------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ----------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~ 174 (250)
T 3nyw_A 101 GSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF-----ADGGIYGSTKFALLGLAESLYR 174 (250)
T ss_dssp CCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC------------CCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC-----CCCcchHHHHHHHHHHHHHHHH
Confidence 123445555555 5566 567764 33 222111 1234678999988776653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 175 e~~~~gi~vn~v~PG~v~T 193 (250)
T 3nyw_A 175 ELAPLGIRVTTLCPGWVNT 193 (250)
T ss_dssp HHGGGTEEEEEEEESSBCS
T ss_pred HhhhcCcEEEEEecCcccC
Confidence 589999999998754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.61 E-value=4.2e-07 Score=74.67 Aligned_cols=119 Identities=18% Similarity=0.189 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+++|+.... .....+.+|++|.+++.++++ ++|+|||+++...
T Consensus 44 ia~~la~~G~~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 109 (266)
T 3uxy_A 44 VVTALRAAGARVAVADRAVAGI--------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGR 109 (266)
T ss_dssp HHHHHHHTTCEEEECSSCCTTS--------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCCHHHH--------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 4788999999999999975432 112345789999988877665 7899999998641
Q ss_pred ----------------hhhHHHHHHHH----HHhCCcceEec-c-cccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEIVHAI----KVAGNIKRFLP-S-EFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~Aa----~~ag~Vkr~v~-S-~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++ ++.+ ..++|. | ..+... ..+...|..+|..++.+.+.
T Consensus 110 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e 183 (266)
T 3uxy_A 110 ITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRP-----GPGHALYCLTKAALASLTQCMGMD 183 (266)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBC-----CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC-----CCCChHHHHHHHHHHHHHHHHHHH
Confidence 33556667766 6667 678874 3 333221 11234678999998876653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 184 ~~~~gI~vn~v~PG~v~T 201 (266)
T 3uxy_A 184 HAPQGIRINAVCPNEVNT 201 (266)
T ss_dssp HGGGTEEEEEEEESSBCC
T ss_pred hhhcCcEEEEEeeCCCcc
Confidence 589999999998754
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3e-07 Score=75.51 Aligned_cols=128 Identities=11% Similarity=0.176 Sum_probs=85.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.|+... +.+.+. .++ ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 45 la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 45 IAKTLASMGLKVWINYRSNAE-----VADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCHH-----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 478999999999999996421 111111 121 2468899999999999888876 7899999998641
Q ss_pred -------------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..+++++ +++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~l 193 (271)
T 4iin_A 120 DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGN-----MGQTNYSASKGGMIAMSKSF 193 (271)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCC-----CCchHhHHHHHHHHHHHHHH
Confidence 2234444444 45556 678774 33 332111 1234677999988876653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.++..+.|+||+...
T Consensus 194 a~e~~~~gi~v~~v~PG~v~T 214 (271)
T 4iin_A 194 AYEGALRNIRFNSVTPGFIET 214 (271)
T ss_dssp HHHHHTTTEEEEEEEECSBCC
T ss_pred HHHHHHhCcEEEEEEeCcccC
Confidence 589999999988754
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=4.8e-07 Score=74.45 Aligned_cols=131 Identities=13% Similarity=0.141 Sum_probs=86.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|++++|+.. . .+..+.+..- ..++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 24 ~a~~l~~~G~~V~~~~r~~~-~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 99 (275)
T 2pd4_A 24 IAQSCFNQGATLAFTYLNES-L--EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 99 (275)
T ss_dssp HHHHHHTTTCEEEEEESSTT-T--HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCHH-H--HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccc
Confidence 47889999999999999864 1 1122222211 1247899999999999888876 6799999998531
Q ss_pred --------------------hhhHHHHHHHHHHhCC-cceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 --------------------FLDQLEIVHAIKVAGN-IKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag~-Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++...-. -.++|. |+.+.... ..+...|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asK~a~~~~~~~la~e 175 (275)
T 2pd4_A 100 LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----MAHYNVMGLAKAALESAVRYLAVD 175 (275)
T ss_dssp GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC----CCCchhhHHHHHHHHHHHHHHHHH
Confidence 2356677777766510 136663 33222111 11234677899988876653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 176 ~~~~gi~v~~v~PG~v~T 193 (275)
T 2pd4_A 176 LGKHHIRVNALSAGPIRT 193 (275)
T ss_dssp HHTTTCEEEEEEECCCCC
T ss_pred hhhcCeEEEEEeeCcccc
Confidence 489999999998754
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=76.12 Aligned_cols=128 Identities=11% Similarity=0.099 Sum_probs=85.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|+.|.++.|.... +.+. ...+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 41 ~a~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (269)
T 3gk3_A 41 ISRRLHDAGMAVAVSHSERND-----HVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITR 115 (269)
T ss_dssp HHHHHHTTTCEEEEEECSCHH-----HHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCchH-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 478999999999999864321 1111 11121 2468899999999999888877 7899999998641
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|...+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~~~~~l 189 (269)
T 3gk3_A 116 DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGA-----FGQANYASAKAGIHGFTKTL 189 (269)
T ss_dssp CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTBHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCC-----CCcchHHHHHHHHHHHHHHH
Confidence 23445555554 4456 577774 33 222111 1234677999988776653
Q ss_pred ------cCCCEEEEeccccch
Q 026978 125 ------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ------~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 190 a~e~~~~gi~v~~v~PG~v~T 210 (269)
T 3gk3_A 190 ALETAKRGITVNTVSPGYLAT 210 (269)
T ss_dssp HHHHGGGTEEEEEEEECSBCC
T ss_pred HHHhhhcCCEEEEEecCcccc
Confidence 589999999998754
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=76.92 Aligned_cols=125 Identities=10% Similarity=0.045 Sum_probs=77.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 98 (253)
T 3qiv_A 25 YAEALAREGAAVVVADINAE------AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFG 98 (253)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 47899999999999999743 22111 1221 2457889999999999988877 899999999862
Q ss_pred ---------------------Chhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 ---------------------QFLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ---------------------~~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+ .+.++..+++.+ ..++|. |+.... .+...|..+|...+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------~~~~~Y~asK~a~~~~~~ 170 (253)
T 3qiv_A 99 GMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW-------LYSNYYGLAKVGINGLTQ 170 (253)
T ss_dssp GGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------------CCHHHHHHHHH
T ss_pred CCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc-------CCCchhHHHHHHHHHHHH
Confidence 1223 344555566666 678874 332211 022346678888777665
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+..+.|+||+...
T Consensus 171 ~la~e~~~~gi~v~~v~PG~v~t 193 (253)
T 3qiv_A 171 QLSRELGGRNIRINAIAPGPIDT 193 (253)
T ss_dssp HHHHHTTTTTEEEEEEEC-----
T ss_pred HHHHHHhhcCeEEEEEEecCCcc
Confidence 3 479999999998764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=5e-07 Score=73.85 Aligned_cols=131 Identities=9% Similarity=0.080 Sum_probs=86.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.++.|+... .++.+.+ ..+....+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 101 (266)
T 3oig_A 25 IARSLHEAGARLIFTYAGERL---EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKE 101 (266)
T ss_dssp HHHHHHHTTCEEEEEESSGGG---HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGG
T ss_pred HHHHHHHCCCEEEEecCchHH---HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEcccccccc
Confidence 478999999999999997432 1122111 12222368999999999998888776 6899999998531
Q ss_pred ---------------------hhhHHHHHHHHHHhCC-cceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ---------------------FLDQLEIVHAIKVAGN-IKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~ag~-Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++++++...-. -.++|. |+ .+... ......|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la 176 (266)
T 3oig_A 102 ELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----MPNYNVMGVAKASLDASVKYLA 176 (266)
T ss_dssp GGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----CTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----CCCcchhHHHHHHHHHHHHHHH
Confidence 2245567777766420 136663 33 33211 11234677899988876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 177 ~e~~~~gi~v~~v~PG~v~T 196 (266)
T 3oig_A 177 ADLGKENIRVNSISAGPIRT 196 (266)
T ss_dssp HHHGGGTEEEEEEEECCCCS
T ss_pred HHHhhcCcEEEEEecCcccc
Confidence 589999999998754
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=3.9e-07 Score=73.18 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=83.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|++++|+.... ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 19 ~a~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~ 85 (236)
T 1ooe_A 19 ILEFFKKNGYTVLNIDLSANDQ-------------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG 85 (236)
T ss_dssp HHHHHHHTTEEEEEEESSCCTT-------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEecCcccc-------------ccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCC
Confidence 4788999999999999985421 1235678899999998888775 789999999842
Q ss_pred ------------------ChhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ------------------QFLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++...- .-.++|. |+..... +..+...|..+|..++.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~e~ 161 (236)
T 1ooe_A 86 GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----PTPSMIGYGMAKAAVHHLTSSLAAKD 161 (236)
T ss_dssp BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----CCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 1234566777776642 0136663 3322111 111234677899998877653
Q ss_pred ----cCCCEEEEeccccchh
Q 026978 125 ----AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~~ 140 (230)
.|+.++.|+||+....
T Consensus 162 ~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 162 SGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp SSCCTTCEEEEEEESCBCCH
T ss_pred cccCCCeEEEEEecCcccCc
Confidence 2488999999977543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-06 Score=71.91 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=86.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCC--------CCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQN--------SRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVV 62 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~--------~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~V 62 (230)
++++|+++|++|++++|+.... . +++.+.+. .+. ...+.++.+|++|.+++.++++ ++|+|
T Consensus 31 ~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 109 (280)
T 3pgx_A 31 HAVRLAAEGADIIACDICAPVSASVTYAPAS-PEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVV 109 (280)
T ss_dssp HHHHHHHTTCEEEEEECCSCCCTTCCSCCCC-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEE
T ss_pred HHHHHHHCCCEEEEEeccccccccccccccC-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999853110 1 22222211 122 2457889999999999988876 78999
Q ss_pred EEcCCCCC-------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHH
Q 026978 63 ISTVAYPQ-------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 63 i~~~~~~~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
||+++... +.+..++++++ ++.+.-.++|. |+ .+.... .....|..+|..
T Consensus 110 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa 184 (280)
T 3pgx_A 110 VANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT-----PGNGHYSASKHG 184 (280)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----TTBHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC-----CCchhHHHHHHH
Confidence 99998641 23455566665 34431256664 33 332111 123467799988
Q ss_pred HHHHHHH-------cCCCEEEEeccccch
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
++.+.+. .|+....|+||+...
T Consensus 185 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t 213 (280)
T 3pgx_A 185 LTALTNTLAIELGEYGIRVNSIHPYSVET 213 (280)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcccC
Confidence 8876553 589999999998764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.58 E-value=5.6e-07 Score=72.71 Aligned_cols=120 Identities=12% Similarity=0.121 Sum_probs=84.9
Q ss_pred CHHHHhh-CCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-----CCCEEEEcCCCC-----
Q 026978 1 MVKASVS-SGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-----EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~-~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-----g~D~Vi~~~~~~----- 69 (230)
++++|++ .|+.|.+..|+.... ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 20 ~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~ 86 (244)
T 4e4y_A 20 VVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSI 86 (244)
T ss_dssp HHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCT
T ss_pred HHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCc
Confidence 4678888 789999998875421 2457899999999999998887 789999999863
Q ss_pred --------------ChhhHHHHHHHHHHhCCcc--eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 70 --------------QFLDQLEIVHAIKVAGNIK--RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 70 --------------~~~~~~~ll~Aa~~ag~Vk--r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
|+.+..++++++...- .+ ++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 87 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~ 160 (244)
T 4e4y_A 87 FDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFIA-----KPNSFAYTLSKGAIAQMTKSLALDLAK 160 (244)
T ss_dssp TTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTCC-----CTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred ccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHccC-----CCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 1335667777776543 22 5653 33 33211 11234677999998877653
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 161 ~gi~v~~v~PG~v~T 175 (244)
T 4e4y_A 161 YQIRVNTVCPGTVDT 175 (244)
T ss_dssp GTCEEEEEEESCBCC
T ss_pred cCeEEEEEecCccCc
Confidence 589999999998764
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-06 Score=71.21 Aligned_cols=127 Identities=15% Similarity=0.179 Sum_probs=83.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||++|...
T Consensus 20 ia~~la~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 20 IARELGVAGAKILLGARRQA------RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP 93 (264)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47889999999999999743 22211 1222 2357788999999999888776 7899999998641
Q ss_pred -------------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..+++++ +++.+ ..++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~asKaal~~l~~~l 167 (264)
T 3tfo_A 94 LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVV-----PTAAVYCATKFAVRAISDGL 167 (264)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccC-----CCChhHHHHHHHHHHHHHHH
Confidence 2234444444 45566 578774 33 332111 1234677999888876553
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 168 a~e~~gIrvn~v~PG~v~T 186 (264)
T 3tfo_A 168 RQESTNIRVTCVNPGVVES 186 (264)
T ss_dssp HHHCSSEEEEEEEECCC--
T ss_pred HHhCCCCEEEEEecCCCcC
Confidence 378889999998754
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.57 E-value=6.3e-07 Score=72.85 Aligned_cols=131 Identities=10% Similarity=0.078 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecC--CCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGEL--DEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~--~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|.+++|+..... +-.+.+.......+.++.+|+ +|.+++.++++ ++|+|||+++..
T Consensus 28 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~ 105 (252)
T 3f1l_A 28 AAMTYARYGATVILLGRNEEKLR--QVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGD 105 (252)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCC
Confidence 47889999999999999743210 001111111123688999999 88888887776 789999999863
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~l~~~l 179 (252)
T 3f1l_A 106 VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGR-----ANWGAYAASKFATEGMMQVL 179 (252)
T ss_dssp CSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCC-----CCCchhHHHHHHHHHHHHHH
Confidence 123456666666 5556 678774 33 332111 1234677999998876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
..+....|.||+...
T Consensus 180 a~e~~~~irvn~v~PG~v~t 199 (252)
T 3f1l_A 180 ADEYQQRLRVNCINPGGTRT 199 (252)
T ss_dssp HHHTTTTCEEEEEECCSBSS
T ss_pred HHHhcCCcEEEEEecCcccC
Confidence 237888889988754
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=4.8e-07 Score=72.94 Aligned_cols=121 Identities=9% Similarity=-0.051 Sum_probs=83.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|++++|+.... ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~ 89 (241)
T 1dhr_A 23 CVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG 89 (241)
T ss_dssp HHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred HHHHHHhCCCEEEEEeCChhhc-------------cCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCC
Confidence 4788999999999999975421 1235678899999999888776 689999999852
Q ss_pred ------------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 70 ------------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
++.+..++++++...- .-.++|. |+ .+... ..+...|..+|...+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e 164 (241)
T 1dhr_A 90 GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----TPGMIGYGMAKGAVHQLCQSLAGK 164 (241)
T ss_dssp BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----CTTBHHHHHHHHHHHHHHHHHTST
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----CCCchHHHHHHHHHHHHHHHHHHH
Confidence 1235566777776641 0136663 33 22211 11234677999998887764
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+.++.|+||+...
T Consensus 165 ~~~~~~gi~v~~v~PG~v~T 184 (241)
T 1dhr_A 165 NSGMPSGAAAIAVLPVTLDT 184 (241)
T ss_dssp TSSCCTTCEEEEEEESCEEC
T ss_pred hccCCCCeEEEEEecCcccC
Confidence 358899999997643
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.7e-07 Score=74.75 Aligned_cols=127 Identities=11% Similarity=0.137 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|.++.|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++.
T Consensus 24 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 24 TVELLLEAGAAVAFCARDGE------RLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 47889999999999999743 21111 1221 2248899999999998887765 67999999986
Q ss_pred CC-------------------hhhHHHHHHHHHH----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQLEIVHAIKV----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 69 ~~-------------------~~~~~~ll~Aa~~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
.. +.+..++++++.. .+ -.++|. |..+.... .....|..+|..++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~ 171 (265)
T 3lf2_A 98 GRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPE-----PHMVATSAARAGVKNLVR 171 (265)
T ss_dssp CCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCC-----TTBHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCC-----CCchhhHHHHHHHHHHHH
Confidence 41 2345666666643 44 456764 33332111 123467789998887665
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+....|.||+...
T Consensus 172 ~la~e~~~~gi~vn~v~PG~v~t 194 (265)
T 3lf2_A 172 SMAFEFAPKGVRVNGILIGLVES 194 (265)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHhcccCeEEEEEEeCcCcC
Confidence 3 589999999998754
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.5e-07 Score=74.01 Aligned_cols=127 Identities=16% Similarity=0.255 Sum_probs=86.5
Q ss_pred CHHHHhhCCC---eEEEEEcCCCCCCCcchHhhhh-hhc----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEc
Q 026978 1 MVKASVSSGH---KTFVYARPVTQNSRPSKLEIHK-EFQ----GIGVTIIEGELDEHKKIVSILK-------EVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~---~V~~l~R~~~~~~~p~k~~~l~-~l~----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~ 65 (230)
++++|+++|+ .|.++.|+.. +.+.+. .+. ...+.++.+|++|.+++.++++ ++|+|||+
T Consensus 49 ia~~l~~~G~~~~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 49 TALEYLEASNGDMKLILAARRLE------KLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp HHHHHHHHHTTCSEEEEEESCHH------HHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred HHHHHHHcCCCCceEEEEECCHH------HHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4678898887 9999999743 222211 121 2357889999999999988877 57999999
Q ss_pred CCCC--------------------ChhhHHHHHHHH----HHhCCcceEec-c-cccccCCCCCCCCchhHHHHHHHHHH
Q 026978 66 VAYP--------------------QFLDQLEIVHAI----KVAGNIKRFLP-S-EFGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 66 ~~~~--------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S-~~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
++.. |+.+..++++++ ++.+ ..++|. | ..|.... .....|..+|..++
T Consensus 123 AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~asKaa~~ 196 (287)
T 3rku_A 123 AGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAY-----PTGSIYCASKFAVG 196 (287)
T ss_dssp CCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----TTCHHHHHHHHHHH
T ss_pred CCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCC-----CCCchHHHHHHHHH
Confidence 9853 123555666665 5566 678774 3 3332211 12346779999888
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. .|+..+.|+||+...
T Consensus 197 ~l~~~la~e~~~~gIrvn~v~PG~v~T 223 (287)
T 3rku_A 197 AFTDSLRKELINTKIRVILIAPGLVET 223 (287)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEESCEES
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCcCcC
Confidence 76653 589999999998754
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=4.8e-07 Score=73.03 Aligned_cols=131 Identities=11% Similarity=0.083 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecC--CCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGEL--DEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~--~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++|++|.+++|+..... +-.+.+......++.++.+|+ +|.+++.++++ ++|+|||+++..
T Consensus 30 ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~ 107 (247)
T 3i1j_A 30 AARAYAAHGASVVLLGRTEASLA--EVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGP 107 (247)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEecCHHHHH--HHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCC
Confidence 47899999999999999743210 001111122224678888888 88888877665 789999999863
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ ..++|. |..+.... .+...|..+|..++.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~~~~~l 181 (247)
T 3i1j_A 108 RTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGR-----ANWGAYGVSKFATEGLMQTL 181 (247)
T ss_dssp CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCC-----CCcchhHHHHHHHHHHHHHH
Confidence 123556666666 4455 567774 33332211 1234677899988876643
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.++....|.||+...
T Consensus 182 a~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 182 ADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp HHHHTTTSSEEEEEEECCCCSS
T ss_pred HHHhcCCCCeEEEEEecCcccC
Confidence 467888899998754
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.55 E-value=2.8e-07 Score=76.25 Aligned_cols=129 Identities=11% Similarity=0.139 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.+++|... ++.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 45 ia~~la~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 119 (280)
T 4da9_A 45 IARALAASGFDIAITGIGDA-----EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIAS 119 (280)
T ss_dssp HHHHHHHTTCEEEEEESCCH-----HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC---
T ss_pred HHHHHHHCCCeEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc
Confidence 47889999999999997432 121111 1222 2468899999999999888877 789999999862
Q ss_pred --------------------ChhhHHHHHHHHHH----hCC--cceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 70 --------------------QFLDQLEIVHAIKV----AGN--IKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 70 --------------------~~~~~~~ll~Aa~~----ag~--Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
++.+..++++++.. .+. ..++|. |+ .+.... .+...|..+|..++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l 194 (280)
T 4da9_A 120 IVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-----PERLDYCMSKAGLAAF 194 (280)
T ss_dssp ---CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------CCHHHHHHHHHHHHH
T ss_pred cCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----CCccHHHHHHHHHHHH
Confidence 12345555555543 220 136663 33 222111 1234677999988876
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .|+....|+||+...
T Consensus 195 ~~~la~e~~~~gI~vn~v~PG~v~T 219 (280)
T 4da9_A 195 SQGLALRLAETGIAVFEVRPGIIRS 219 (280)
T ss_dssp HHHHHHHHTTTTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHhCcEEEEEeecCCcC
Confidence 653 589999999998754
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.55 E-value=6.2e-07 Score=73.24 Aligned_cols=131 Identities=14% Similarity=0.129 Sum_probs=85.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc---CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~---~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|+.|.++.|+.... ..+.++.+. ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 38 ~a~~l~~~G~~v~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 38 AARGCAEMGAAVAITYASRAQG----AEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHHHHHTSCEEEECBSSSSSH----HHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHHCCCeEEEEeCCcchh----HHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 4788999999999999876432 011222221 3568899999999999888776 5699999998641
Q ss_pred -------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+..... ..+...|..+|...+.+.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~l 189 (267)
T 3gdg_A 114 DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANF---PQEQTSYNVAKAGCIHMARSL 189 (267)
T ss_dssp CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCS---SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCC---CCCCCcchHHHHHHHHHHHHH
Confidence 23455566665 5666 567764 33 3321110 01234678999998877654
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
..+....|.||+...
T Consensus 190 a~e~~~~i~v~~v~PG~v~t 209 (267)
T 3gdg_A 190 ANEWRDFARVNSISPGYIDT 209 (267)
T ss_dssp HHHTTTTCEEEEEEECCEEC
T ss_pred HHHhccCcEEEEEECCcccc
Confidence 237777888887643
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.54 E-value=6.9e-07 Score=73.95 Aligned_cols=132 Identities=9% Similarity=0.105 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+++|+..... +-.+.+.......+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 49 ia~~la~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~ 126 (281)
T 4dry_A 49 IAQALSAEGYSVVITGRRPDVLD--AAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPV 126 (281)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999743210 00111111112235899999999999888776 6799999998631
Q ss_pred -----------------hhhHHHHHHHH----HHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 -----------------FLDQLEIVHAI----KVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa----~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+..++.+++ ++.+ .-.++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 127 ~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la 201 (281)
T 4dry_A 127 PLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----RPNSAPYTATKHAITGLTKSTA 201 (281)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----CTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----CCCChhHHHHHHHHHHHHHHHH
Confidence 22334444444 4432 0246764 33 33211 11234677999988876653
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 202 ~e~~~~gI~vn~v~PG~v~T 221 (281)
T 4dry_A 202 LDGRMHDIACGQIDIGNAAT 221 (281)
T ss_dssp HHHGGGTEEEEEEEEECBCC
T ss_pred HHhcccCeEEEEEEECcCcC
Confidence 589999999987754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.5e-06 Score=72.81 Aligned_cols=132 Identities=11% Similarity=0.093 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-CcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++.|+..... ..++++ ..+.+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 61 ia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 61 IALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 47889999999999999875421 000011 111222 2357889999999999988877 899999999863
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
|+.+..++++++ ++.+ ..++|. |+ .+.... ...+...|..+|..++.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~---~~~~~~~Y~aSKaal~~l~~~ 216 (346)
T 3kvo_A 141 SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV---WFKQHCAYTIAKYGMSMYVLG 216 (346)
T ss_dssp CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG---GTSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC---CCCCchHHHHHHHHHHHHHHH
Confidence 234566777776 4445 578774 33 322110 011234677899988776653
Q ss_pred ------cCCCEEEEeccc
Q 026978 125 ------AQIPYTFVSANL 136 (230)
Q Consensus 125 ------~gl~~tilr~g~ 136 (230)
.++....|.||+
T Consensus 217 la~e~~~gIrvn~v~PG~ 234 (346)
T 3kvo_A 217 MAEEFKGEIAVNALWPKT 234 (346)
T ss_dssp HHHHTTTTCEEEEEECSB
T ss_pred HHHHhcCCcEEEEEeCCC
Confidence 478899999996
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.53 E-value=5.8e-07 Score=74.41 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=85.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.+++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 24 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 97 (280)
T 3tox_A 24 AALLFAREGAKVVVTARNGN------ALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALG 97 (280)
T ss_dssp HHHHHHHTTCEEEECCSCHH------HHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 47899999999999999743 22221 1222 2457889999999999888876 789999999853
Q ss_pred -------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
|+.+..++++++ ++.+ -.++|. |+ .+... +..+...|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~~Y~asKaa~~~l~~~ 172 (280)
T 3tox_A 98 AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTA----GFAGVAPYAASKAGLIGLVQA 172 (280)
T ss_dssp SCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTB----CCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcC----CCCCchhHHHHHHHHHHHHHH
Confidence 123455555554 4445 457764 33 33211 111234677999988876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 173 la~e~~~~gIrvn~v~PG~v~T 194 (280)
T 3tox_A 173 LAVELGARGIRVNALLPGGTDT 194 (280)
T ss_dssp HHHHHHTTTEEEEEEEECSBSS
T ss_pred HHHHhhhcCeEEEEEEECCCCC
Confidence 589999999998754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=5.3e-07 Score=74.90 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=46.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCH-HHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEH-KKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~-~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|+.|++++|+..... +-.+.+.......+.++.+|++|. +++.++++ ++|+|||++|..
T Consensus 28 ~a~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 28 ICKQLSSNGIMVVLTCRDVTKGH--EAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCccc
Confidence 47899999999999999853210 001111111124689999999997 77766655 799999999853
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.52 E-value=9.7e-07 Score=72.75 Aligned_cols=126 Identities=11% Similarity=0.091 Sum_probs=84.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|++++|+.. +.+.+ +.+ ...+.++.+|++|.+++.++++ +.|+|||+++..
T Consensus 46 ia~~l~~~G~~Vi~~~r~~~------~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~ 118 (281)
T 3ppi_A 46 TVRRLHADGLGVVIADLAAE------KGKALADEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQ 118 (281)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCChH------HHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCcccccc
Confidence 47899999999999999743 22222 223 3568999999999999988876 679999994421
Q ss_pred ---------------------ChhhHHHHHHHHHHh----------CCcceEec-cc-ccccCCCCCCCCchhHHHHHHH
Q 026978 70 ---------------------QFLDQLEIVHAIKVA----------GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKR 116 (230)
Q Consensus 70 ---------------------~~~~~~~ll~Aa~~a----------g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~ 116 (230)
++.+..++++++... + -.++|. |+ .+.... .+...|..+|.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asKa 192 (281)
T 3ppi_A 119 RIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGE-RGALVLTASIAGYEGQ-----IGQTAYAAAKA 192 (281)
T ss_dssp CSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSC-CEEEEEECCGGGTSCC-----TTCHHHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCC-CeEEEEEecccccCCC-----CCCcccHHHHH
Confidence 123455666665532 2 246663 33 332211 12346779999
Q ss_pred HHHHHHHH-------cCCCEEEEeccccch
Q 026978 117 IVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 117 ~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.++.+.+. .|+..+.|+||+...
T Consensus 193 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T 222 (281)
T 3ppi_A 193 GVIGLTIAAARDLSSAGIRVNTIAPGTMKT 222 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCcCCc
Confidence 88776543 589999999998754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.1e-06 Score=70.66 Aligned_cols=135 Identities=10% Similarity=0.071 Sum_probs=86.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC-CcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS-RPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~-~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+++|+..... ..+..+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 22 ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 22 IALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 47889999999999999865421 00011111 1111 3457889999999999888776 789999999863
Q ss_pred -------------------ChhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 -------------------QFLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
|+.+..++++++. +.+ ..++|. |+ .+..... ..+...|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---~~~~~~Y~asKaal~~l~~~ 177 (274)
T 3e03_A 102 WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW---WGAHTGYTLAKMGMSLVTLG 177 (274)
T ss_dssp CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH---HHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC---CCCCchHHHHHHHHHHHHHH
Confidence 2334555666653 345 567774 33 2211000 00123577899988876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.+
T Consensus 178 la~e~~~~gI~vn~v~PG~~v~ 199 (274)
T 3e03_A 178 LAAEFGPQGVAINALWPRTVIA 199 (274)
T ss_dssp HHHHHGGGTCEEEEEECSBCBC
T ss_pred HHHHhhhcCEEEEEEECCcccc
Confidence 589999999996543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.51 E-value=6.5e-07 Score=73.51 Aligned_cols=130 Identities=9% Similarity=0.083 Sum_probs=83.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.++.+... ++.+.+ ..+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 42 ~a~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 116 (272)
T 4e3z_A 42 VCRLAARQGWRVGVNYAANR-----EAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVD 116 (272)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCh-----hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 47899999999988744321 121111 1121 2458899999999999888776 7899999998531
Q ss_pred --------------------hhhHHHHHHHHHHh-------CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 71 --------------------FLDQLEIVHAIKVA-------GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~a-------g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
+.+..++++++... + ..++|. |+ .+..... .....|..+|..++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----~~~~~Y~asKaa~~~~ 191 (272)
T 4e3z_A 117 YPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQ-GGAIVNVSSMAAILGSA----TQYVDYAASKAAIDTF 191 (272)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC-CEEEEEECCTHHHHCCT----TTCHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCC-CCEEEEEcchHhccCCC----CCcchhHHHHHHHHHH
Confidence 23456667766554 2 356764 33 2221110 0124577999988876
Q ss_pred HHH-------cCCCEEEEeccccchh
Q 026978 122 IEA-------AQIPYTFVSANLCGAY 140 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~~ 140 (230)
.+. .|+..+.|+||+....
T Consensus 192 ~~~la~e~~~~gi~v~~v~PG~v~t~ 217 (272)
T 4e3z_A 192 TIGLAREVAAEGIRVNAVRPGIIETD 217 (272)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred HHHHHHHHHHcCcEEEEEecCCCcCC
Confidence 543 4899999999987643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.51 E-value=8.1e-07 Score=72.80 Aligned_cols=128 Identities=10% Similarity=0.129 Sum_probs=85.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc----CCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~----~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.++.|+.... .+..+.+. ...+..+.+|++|.+++.++++ ++|+|||+++...
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~ 100 (267)
T 3t4x_A 26 IATSLVAEGANVLINGRREENV-----NETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVE 100 (267)
T ss_dssp HHHHHHHTTCEEEEEESSHHHH-----HHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence 4788999999999999974321 01111221 2346789999999999888877 7899999998641
Q ss_pred ----------------hhhH----HHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQ----LEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+. +.++..+++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e 174 (267)
T 3t4x_A 101 YFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMP-----SQEMAHYSATKTMQLSLSRSLAEL 174 (267)
T ss_dssp GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccC-----CCcchHHHHHHHHHHHHHHHHHHH
Confidence 2233 33445555666 678774 33 33211 11235677999998877654
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 175 ~~~~gi~vn~v~PG~v~t 192 (267)
T 3t4x_A 175 TTGTNVTVNTIMPGSTLT 192 (267)
T ss_dssp TTTSEEEEEEEEECCBCC
T ss_pred hCCCCeEEEEEeCCeecC
Confidence 468888999998754
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=7.7e-07 Score=79.51 Aligned_cols=132 Identities=12% Similarity=0.171 Sum_probs=90.8
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcC--CCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~--~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|+ .|.++.|+.... +...+..+.++. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 255 lA~~La~~Ga~~vvl~~R~~~~~--~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~ 332 (496)
T 3mje_A 255 VARRLAEQGAAHLVLTSRRGADA--PGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHD 332 (496)
T ss_dssp HHHHHHHTTCSEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCS
T ss_pred HHHHHHHCCCcEEEEEeCCCCCh--HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCC
Confidence 4688999998 677888864322 111112223333 347889999999999999887 479999999864
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH---HcC
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE---AAQ 126 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---~~g 126 (230)
++.+..+|.++++..+ ..+||. |+ .|..... ....|..+|...+.+.+ ..|
T Consensus 333 ~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~-----g~~~YaAaKa~ldala~~~~~~G 406 (496)
T 3mje_A 333 DAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSG-----GQPGYAAANAYLDALAEHRRSLG 406 (496)
T ss_dssp CCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCT-----TCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCC-----CcHHHHHHHHHHHHHHHHHHhcC
Confidence 2457888999998887 788874 43 2221111 13467788887766544 479
Q ss_pred CCEEEEeccccchh
Q 026978 127 IPYTFVSANLCGAY 140 (230)
Q Consensus 127 l~~tilr~g~~~~~ 140 (230)
++++.|.||.|.+.
T Consensus 407 i~v~sV~pG~w~~~ 420 (496)
T 3mje_A 407 LTASSVAWGTWGEV 420 (496)
T ss_dssp CCCEEEEECEESSS
T ss_pred CeEEEEECCcccCC
Confidence 99999999988653
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-06 Score=70.11 Aligned_cols=126 Identities=16% Similarity=0.187 Sum_probs=84.2
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~-- 69 (230)
++++|+++| +.|.++.|+.. +.+.+..-....+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 18 ia~~l~~~g~~~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~ 91 (254)
T 3kzv_A 18 IVDVLFSLDKDTVVYGVARSEA------PLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEP 91 (254)
T ss_dssp HHHHHHHHCSSCEEEEEESCHH------HHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCC
T ss_pred HHHHHHhcCCCeEEEEecCCHH------HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCC
Confidence 467888875 78888888632 2222221113468899999999999888876 789999999863
Q ss_pred ------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 70 ------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
++.+..++++++ ++.+ .++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~l 164 (254)
T 3kzv_A 92 VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY-----FSSWGAYGSSKAALNHFAMTL 164 (254)
T ss_dssp CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS-----SCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC-----CCCcchHHHHHHHHHHHHHHH
Confidence 123556666666 5555 56663 33 33211 11234677999998877654
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.++....|+||+...
T Consensus 165 a~e~~~i~vn~v~PG~v~t 183 (254)
T 3kzv_A 165 ANEERQVKAIAVAPGIVDT 183 (254)
T ss_dssp HHHCTTSEEEEEECSSCCC
T ss_pred HhhccCcEEEEEeCCcccc
Confidence 489999999998754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.50 E-value=8.9e-07 Score=72.18 Aligned_cols=127 Identities=12% Similarity=0.105 Sum_probs=82.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK--------EVDVVISTVAY- 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~- 68 (230)
++++|+++|++|++++|+.. +.+.+ ..+. ...+.++.+|++|.+++.++++ .+|+|||+++.
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g 94 (260)
T 2qq5_A 21 IALQLCKAGATVYITGRHLD------TLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAG 94 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTT
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccc
Confidence 47889999999999999742 22111 1221 2357889999999998877654 46999999941
Q ss_pred ---------C----------------ChhhHHHHHH----HHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHH
Q 026978 69 ---------P----------------QFLDQLEIVH----AIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 69 ---------~----------------~~~~~~~ll~----Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
. ++.+..++.+ .+++.+ ..++|. |+.+.... .+...|..+|..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~Y~asK~a~ 168 (260)
T 2qq5_A 95 VQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY-----MFNVPYGVGKAAC 168 (260)
T ss_dssp HHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC-----CSSHHHHHHHHHH
T ss_pred cccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC-----CCCCchHHHHHHH
Confidence 1 1223333334 344556 678774 43222111 1335678999988
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+.+. .|+.++.|+||+...
T Consensus 169 ~~~~~~la~e~~~~gi~v~~v~PG~v~T 196 (260)
T 2qq5_A 169 DKLAADCAHELRRHGVSCVSLWPGIVQT 196 (260)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCCSCT
T ss_pred HHHHHHHHHHhccCCeEEEEEecCcccc
Confidence 876543 589999999998754
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.4e-06 Score=70.56 Aligned_cols=133 Identities=13% Similarity=0.115 Sum_probs=85.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCC-----------CCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CC
Q 026978 1 MVKASVSSGHKTFVYARPVTQ-----------NSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EV 59 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~-----------~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~ 59 (230)
++++|+++|++|.+++|+... .. +++.+.+. .+. ...+.++.+|++|.+++.++++ ++
T Consensus 27 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 105 (286)
T 3uve_A 27 HAVRLAQEGADIIAVDICKPIRAGVVDTAIPAST-PEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRL 105 (286)
T ss_dssp HHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCC-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHCCCeEEEEeccccccccccccccccCC-HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 478899999999999997321 11 12222111 111 2457889999999999988876 78
Q ss_pred CEEEEcCCCC--------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHH
Q 026978 60 DVVISTVAYP--------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLE 113 (230)
Q Consensus 60 D~Vi~~~~~~--------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~ 113 (230)
|+|||+++.. |+.+..++++++.. .+.-.++|. |+ .+... ......|..
T Consensus 106 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a 180 (286)
T 3uve_A 106 DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA-----YPHTGHYVA 180 (286)
T ss_dssp CEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTCHHHHH
T ss_pred CEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC-----CCCccHHHH
Confidence 9999999853 12345556665533 331246664 33 33211 112346779
Q ss_pred HHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 114 KKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 114 ~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+|..++.+.+. .|+....|.||+...
T Consensus 181 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T 213 (286)
T 3uve_A 181 AKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKT 213 (286)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCcccC
Confidence 99988876653 589999999998754
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-06 Score=71.77 Aligned_cols=130 Identities=16% Similarity=0.179 Sum_probs=85.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|.++.|+.... ++.+.+.. ...++.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 48 ia~~la~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~ 123 (296)
T 3k31_A 48 IAKAVCAQGAEVALTYLSETFK---KRVDPLAE-SLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNE 123 (296)
T ss_dssp HHHHHHHTTCEEEEEESSGGGH---HHHHHHHH-HHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEeCChHHH---HHHHHHHH-hcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCccc
Confidence 4788999999999999984321 11111111 12357899999999999888876 6799999998531
Q ss_pred --------------------hhhHHHHHHHHHHhCCc--ceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 --------------------FLDQLEIVHAIKVAGNI--KRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag~V--kr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++...- . .++|. |+.+.... ......|..+|..++.+.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m-~~~g~IV~isS~~~~~~----~~~~~~Y~asKaal~~l~~~la~ 198 (296)
T 3k31_A 124 LKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM-TNGGSILTLSYYGAEKV----VPHYNVMGVCKAALEASVKYLAV 198 (296)
T ss_dssp HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-TTCEEEEEEECGGGTSC----CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEEehhhccC----CCCchhhHHHHHHHHHHHHHHHH
Confidence 235666777776542 2 36663 33222111 11234677899988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 199 e~~~~gIrvn~v~PG~v~T 217 (296)
T 3k31_A 199 DLGKQQIRVNAISAGPVRT 217 (296)
T ss_dssp HHHTTTEEEEEEEECCCCC
T ss_pred HHhhcCcEEEEEEECCCcC
Confidence 589999999998754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.48 E-value=6.4e-07 Score=72.91 Aligned_cols=125 Identities=10% Similarity=0.123 Sum_probs=84.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~----- 69 (230)
++++|+++|++|++++|... + ....+ ...++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ia~~l~~~G~~V~~~~r~~~------~--~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~ 95 (257)
T 3tl3_A 25 TTKRLLDAGAQVVVLDIRGE------D--VVADL-GDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRV 95 (257)
T ss_dssp HHHHHHHHTCEEEEEESSCH------H--HHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHH
T ss_pred HHHHHHHCCCEEEEEeCchH------H--HHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCccc
Confidence 47889999999999999531 1 11233 4578999999999999988887 899999999852
Q ss_pred ------------------ChhhHHHHHHHHHHhC-----------CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHH
Q 026978 70 ------------------QFLDQLEIVHAIKVAG-----------NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag-----------~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
|+.+..++++++...- .-.++|. |+ .+... ..+...|..+|..+
T Consensus 96 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa~ 170 (257)
T 3tl3_A 96 LSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-----QIGQAAYSASKGGV 170 (257)
T ss_dssp HHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-----HHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-----CCCCccHHHHHHHH
Confidence 1235566677665531 0236663 33 22211 11223577899988
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+.+. .|+....|+||+...
T Consensus 171 ~~~~~~la~e~~~~gI~vn~v~PG~v~T 198 (257)
T 3tl3_A 171 VGMTLPIARDLASHRIRVMTIAPGLFDT 198 (257)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHHhcccCcEEEEEEecCccC
Confidence 776543 589999999998754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.48 E-value=4.1e-06 Score=69.75 Aligned_cols=133 Identities=10% Similarity=0.122 Sum_probs=85.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCC-------CCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQN-------SRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVI 63 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~-------~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi 63 (230)
++++|+++|++|.+++|+.... . +++.+. ...+. ...+.++.+|++|.+++.++++ ++|+||
T Consensus 44 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 122 (299)
T 3t7c_A 44 HAITLAREGADIIAIDVCKQLDGVKLPMST-PDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVL 122 (299)
T ss_dssp HHHHHHHTTCEEEEEECCSCCTTCCSCCCC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHCCCEEEEEecccccccccccccC-HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4788999999999999973211 1 122211 11121 2468899999999999888876 789999
Q ss_pred EcCCCC--------------------ChhhHHHHHHHHHH----hCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHH
Q 026978 64 STVAYP--------------------QFLDQLEIVHAIKV----AGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 64 ~~~~~~--------------------~~~~~~~ll~Aa~~----ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
|+++.. |+.+..++++++.. .+...++|. |+ .+... ......|..+|..
T Consensus 123 ~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa 197 (299)
T 3t7c_A 123 ANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG-----AENIGNYIASKHG 197 (299)
T ss_dssp ECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC-----CTTCHHHHHHHHH
T ss_pred ECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----CCCcchHHHHHHH
Confidence 999853 12345556666533 221356764 43 23211 1123467799998
Q ss_pred HHHHHHH-------cCCCEEEEeccccch
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
++.+.+. .|+....|.||+...
T Consensus 198 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T 226 (299)
T 3t7c_A 198 LHGLMRTMALELGPRNIRVNIVCPSSVAT 226 (299)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCBSS
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCCccC
Confidence 8876653 489999999998754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.9e-06 Score=71.23 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=83.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
++++|+++|++|.++.|+.. +.+.+.......+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 21 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 94 (281)
T 3zv4_A 21 LVDRFVAEGARVAVLDKSAE------RLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYST 94 (281)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTC
T ss_pred HHHHHHHCcCEEEEEeCCHH------HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcccc
Confidence 47899999999999999742 3222222223568899999999998887765 679999999853
Q ss_pred --------------------ChhhHHHHHHHHHH----hCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 --------------------QFLDQLEIVHAIKV----AGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 --------------------~~~~~~~ll~Aa~~----ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
++.+..++++++.. .+ .++|. |..+.... .....|..+|..++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~ 167 (281)
T 3zv4_A 95 ALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGFYPN-----GGGPLYTATKHAVVGLVR 167 (281)
T ss_dssp CGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSSS-----SSCHHHHHHHHHHHHHHH
T ss_pred ccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhccCC-----CCCchhHHHHHHHHHHHH
Confidence 12244555665543 33 36653 33332211 123467789998887765
Q ss_pred H------cCCCEEEEeccccch
Q 026978 124 A------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~------~gl~~tilr~g~~~~ 139 (230)
. ..+....|.||+...
T Consensus 168 ~la~e~~~~Irvn~v~PG~v~T 189 (281)
T 3zv4_A 168 QMAFELAPHVRVNGVAPGGMNT 189 (281)
T ss_dssp HHHHHHTTTSEEEEEEECSSCC
T ss_pred HHHHHhcCCCEEEEEECCcCcC
Confidence 3 238888899988754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.8e-06 Score=70.09 Aligned_cols=128 Identities=10% Similarity=0.073 Sum_probs=86.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|.+++|+.. .++.+.+..- ...+.++.+|++|.+++.++++ .+|+|||+++...
T Consensus 44 ia~~l~~~G~~V~~~~r~~~----~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~ 118 (280)
T 3nrc_A 44 IAKAMHREGAELAFTYVGQF----KDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQ 118 (280)
T ss_dssp HHHHHHHTTCEEEEEECTTC----HHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGG
T ss_pred HHHHHHHcCCEEEEeeCchH----HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcc
Confidence 47899999999999999861 2233333221 2358999999999999888776 4699999998631
Q ss_pred ---------------------hhhHHHHHHHHHHh---CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 ---------------------FLDQLEIVHAIKVA---GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a---g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++... . ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~asKaal~~~~~~ 192 (280)
T 3nrc_A 119 LEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKA-----MPSYNTMGVAKASLEATVRY 192 (280)
T ss_dssp SSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSC-----CTTTHHHHHHHHHHHHHHHH
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccC-----CCCchhhHHHHHHHHHHHHH
Confidence 23456677776653 2 346663 33 22211 11234677899988876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 193 la~e~~~~gi~v~~v~PG~v~T 214 (280)
T 3nrc_A 193 TALALGEDGIKVNAVSAGPIKT 214 (280)
T ss_dssp HHHHHGGGTCEEEEEEECCCCC
T ss_pred HHHHHHHcCcEEEEEeeccccc
Confidence 589999999998764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-06 Score=70.90 Aligned_cols=130 Identities=10% Similarity=0.094 Sum_probs=86.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.++.|+.... ++.+.+.. ....+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 49 ia~~la~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~ 124 (293)
T 3grk_A 49 IAKAAREAGAELAFTYQGDALK---KRVEPLAE-ELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDE 124 (293)
T ss_dssp HHHHHHHTTCEEEEEECSHHHH---HHHHHHHH-HHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEcCCHHHH---HHHHHHHH-hcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCccc
Confidence 4788999999999999973211 11111111 12358899999999999888876 7899999998531
Q ss_pred --------------------hhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 --------------------FLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++...- .-.++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~ 199 (293)
T 3grk_A 125 LTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM-----PNYNVMGVAKAALEASVKYLAV 199 (293)
T ss_dssp HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC-----TTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC-----CchHHHHHHHHHHHHHHHHHHH
Confidence 235667777776642 0236663 33 222111 1234677899988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|+||+...
T Consensus 200 e~~~~gI~vn~v~PG~v~T 218 (293)
T 3grk_A 200 DLGPQNIRVNAISAGPIKT 218 (293)
T ss_dssp HHGGGTEEEEEEEECCCCC
T ss_pred HHhHhCCEEEEEecCCCcc
Confidence 589999999998754
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-06 Score=71.69 Aligned_cols=134 Identities=13% Similarity=0.196 Sum_probs=85.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC------CcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS------RPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~------~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~ 64 (230)
++++|+++|++|++++|+..... .+++.+.. ..+. ...+.++.+|++|.+++.++++ ++|+|||
T Consensus 62 ia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 141 (317)
T 3oec_A 62 HAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVS 141 (317)
T ss_dssp HHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47889999999999988743210 01121111 1111 2457889999999999888876 7899999
Q ss_pred cCCCCC-------------------hhhHHHHHHHHH----HhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHH
Q 026978 65 TVAYPQ-------------------FLDQLEIVHAIK----VAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 65 ~~~~~~-------------------~~~~~~ll~Aa~----~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
+++... +.+..++++++. +.+.-.++|. |+ .+.... .....|..+|..++
T Consensus 142 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKaa~~ 216 (317)
T 3oec_A 142 NVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA-----PGQSHYAASKHGVQ 216 (317)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-----TTBHHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-----CCCcchHHHHHHHH
Confidence 998641 234555666553 3321245663 33 332111 12346779999888
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. .|+....|+||+...
T Consensus 217 ~l~~~la~e~~~~gI~vn~v~PG~v~T 243 (317)
T 3oec_A 217 GLMLSLANEVGRHNIRVNSVNPGAVNT 243 (317)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred HHHHHHHHHHhhcCeEEEEEecCcccC
Confidence 76653 589999999998764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=71.15 Aligned_cols=131 Identities=11% Similarity=0.113 Sum_probs=84.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
|+++|+++|++|.++.|+... .++.+.+.. ....+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 32 ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 107 (271)
T 3ek2_A 32 IAKACKREGAELAFTYVGDRF---KDRITEFAA-EFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREA 107 (271)
T ss_dssp HHHHHHHTTCEEEEEESSGGG---HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGG
T ss_pred HHHHHHHcCCCEEEEecchhh---HHHHHHHHH-HcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccc
Confidence 478999999999999998432 122222211 12358899999999999988876 6799999998531
Q ss_pred ---------------------hhhHHHHHHHHHHhCC-cceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ---------------------FLDQLEIVHAIKVAGN-IKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~ag~-Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++...-. -.++|. |+.+.... ..+...|..+|..++.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~~la~ 183 (271)
T 3ek2_A 108 IAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA----IPNYNTMGLAKAALEASVRYLAV 183 (271)
T ss_dssp GSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC----CCCccchhHHHHHHHHHHHHHHH
Confidence 2245667777765410 135553 33222111 11234677899888876543
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 184 e~~~~gi~v~~v~PG~v~T 202 (271)
T 3ek2_A 184 SLGAKGVRVNAISAGPIKT 202 (271)
T ss_dssp HHHTTTCEEEEEEECCC--
T ss_pred HHHhcCcEEEEEecCcccc
Confidence 589999999998754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-06 Score=68.80 Aligned_cols=118 Identities=14% Similarity=0.015 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~---- 69 (230)
|+++|+++|++|++++|+.... ....+.+|++|.+++.++++ ++|+|||+++..
T Consensus 38 la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~ 102 (251)
T 3orf_A 38 VVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGN 102 (251)
T ss_dssp HHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCC
Confidence 4789999999999999986421 12356789999999888776 459999999852
Q ss_pred ----------------ChhhHHHHHHHHHHhCCc--ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 70 ----------------QFLDQLEIVHAIKVAGNI--KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~ag~V--kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
++.+..++++++...- . .++|. |+ .+... ..+...|..+|...+.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~~-----~~~~~~Y~~sKaa~~~~~~~la~e~ 176 (251)
T 3orf_A 103 ASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL-NQGGLFVLTGASAALNR-----TSGMIAYGATKAATHHIIKDLASEN 176 (251)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE-EEEEEEEEECCGGGGSC-----CTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred cccccCHHHHHHHHHHHhHHHHHHHHHHHHhh-ccCCEEEEEechhhccC-----CCCCchhHHHHHHHHHHHHHHHHHh
Confidence 1346677888887753 2 25663 33 33221 11235677999998887763
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|+||+...
T Consensus 177 ~~~~~gi~v~~v~PG~v~t 195 (251)
T 3orf_A 177 GGLPAGSTSLGILPVTLDT 195 (251)
T ss_dssp SSSCTTCEEEEEEESCBCC
T ss_pred cccCCCcEEEEEecCcCcC
Confidence 368899999998754
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.42 E-value=3.7e-06 Score=68.88 Aligned_cols=128 Identities=8% Similarity=0.096 Sum_probs=83.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc----------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK----------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~----------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|++++|+... ..+.+. .+ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 25 IARVAQEQGAQLVLTGFDRLR-----LIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp HHHHHHHTTCEEEEEECSCHH-----HHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEecChHH-----HHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccC
Confidence 478899999999999997421 011111 22 2357889999999999988877 789999999843
Q ss_pred C------------------------hhhHHHHHHHHHHhC-CcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 70 Q------------------------FLDQLEIVHAIKVAG-NIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 70 ~------------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
. +.+..++++++...- .-.++|. |+.+. . +......|..+|..++.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~---~--~~~~~~~Y~asKaa~~~l~~ 173 (269)
T 2h7i_A 99 PQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS---R--AMPAYNWMTVAKSALESVNR 173 (269)
T ss_dssp CGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS---S--CCTTTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc---c--ccCchHHHHHHHHHHHHHHH
Confidence 1 124456666665431 0135663 33221 1 11123467789998877654
Q ss_pred H-------cCCCEEEEeccccch
Q 026978 124 A-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~~ 139 (230)
. .|+....|+||+...
T Consensus 174 ~la~e~~~~gi~vn~v~PG~v~T 196 (269)
T 2h7i_A 174 FVAREAGKYGVRSNLVAAGPIRT 196 (269)
T ss_dssp HHHHHHHTTTCEEEEEEECCCCC
T ss_pred HHHHHhcccCcEEEEEecCcccc
Confidence 3 589999999998753
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=71.78 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=85.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|.... +.+ ....++ ...+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 24 ia~~la~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 98 (259)
T 3edm_A 24 CAIRFAQEGANVVLTYNGAAE-----GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI 98 (259)
T ss_dssp HHHHHHHTTCEEEEEECSSCH-----HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccC
Confidence 478899999999998665321 111 112222 2457899999999999988877 789999999753
Q ss_pred -------------------ChhhHHHHHHHHHHhCCcc--eEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 -------------------QFLDQLEIVHAIKVAGNIK--RFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag~Vk--r~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.+..++++++...- .+ ++|. |+ .+.... ..+...|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~----~~~~~~Y~asKaa~~~l~~~la 173 (259)
T 3edm_A 99 ARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGG----GPGALAYATSKGAVMTFTRGLA 173 (259)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHHCC----STTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhccCC----CCCcHHHHHHHHHHHHHHHHHH
Confidence 1345677788777653 33 5653 33 332111 11234677999998877653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
..+....|.||+...
T Consensus 174 ~e~~~~I~vn~v~PG~v~T 192 (259)
T 3edm_A 174 KEVGPKIRVNAVCPGMIST 192 (259)
T ss_dssp HHHTTTCEEEEEEECCBCC
T ss_pred HHHCCCCEEEEEEECCCcC
Confidence 238888899987754
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-06 Score=71.67 Aligned_cols=129 Identities=12% Similarity=0.108 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|.... +.+.+. .+. ...+.++.+|++|.+++.++++ ++|+|||+++...
T Consensus 43 ia~~la~~G~~Vv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~ 117 (267)
T 3u5t_A 43 IAARLASDGFTVVINYAGKAA-----AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP 117 (267)
T ss_dssp HHHHHHHHTCEEEEEESSCSH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999988664321 222211 111 2457889999999999888876 7899999998641
Q ss_pred -------------------hhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -------------------FLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++++++...- .-.++|. |+ .+.... .....|..+|..++.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e 192 (267)
T 3u5t_A 118 LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----PSYGIYAAAKAGVEAMTHVLSKE 192 (267)
T ss_dssp CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----CCchHHHHHHHHHHHHHHHHHHH
Confidence 335666777776542 0135663 32 222111 1234677999998877653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 193 ~~~~gI~vn~v~PG~v~T 210 (267)
T 3u5t_A 193 LRGRDITVNAVAPGPTAT 210 (267)
T ss_dssp TTTSCCEEEEEEECCBC-
T ss_pred hhhhCCEEEEEEECCCcC
Confidence 489999999988753
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=3.1e-06 Score=69.63 Aligned_cols=133 Identities=14% Similarity=0.143 Sum_probs=85.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCC--------CCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQ--------NSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVV 62 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~--------~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~V 62 (230)
++++|+++|++|.+++|+... .. +++.+... .+. ...+.++.+|++|.+++.++++ ++|+|
T Consensus 27 ~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 105 (277)
T 3tsc_A 27 HAVRMAAEGADIIAVDIAGKLPSCVPYDPAS-PDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDII 105 (277)
T ss_dssp HHHHHHHTTCEEEEEECCSCCCTTCCSCCCC-HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHHHHcCCEEEEEeccccccccccccccC-HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 478899999999999985321 01 12222111 111 3458889999999999888776 58999
Q ss_pred EEcCCCCC-------------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHH
Q 026978 63 ISTVAYPQ-------------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 63 i~~~~~~~-------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
||+++... +.+..+++++ +++.+.-.++|. |+ .+.... .....|..+|..
T Consensus 106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa 180 (277)
T 3tsc_A 106 VANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ-----PFMIHYTASKHA 180 (277)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----SSCHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC-----CCchhhHHHHHH
Confidence 99998641 2344555555 344331246763 33 332111 123467799998
Q ss_pred HHHHHHH-------cCCCEEEEeccccch
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
++.+.+. .|+....|+||+...
T Consensus 181 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T 209 (277)
T 3tsc_A 181 VTGLARAFAAELGKHSIRVNSVHPGPVNT 209 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBSS
T ss_pred HHHHHHHHHHHhCccCeEEEEEEeCCCcC
Confidence 8876653 589999999998754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.39 E-value=6.1e-06 Score=68.24 Aligned_cols=129 Identities=10% Similarity=0.087 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCC----HHHHHHHhc-------CCCEEEEc
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDE----HKKIVSILK-------EVDVVIST 65 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d----~~~L~~al~-------g~D~Vi~~ 65 (230)
++++|+++|++|++++|+.. ++.+.+ +.+. ...+.++.+|++| .+++.++++ ++|+|||+
T Consensus 39 ia~~L~~~G~~V~~~~r~~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnn 113 (288)
T 2x9g_A 39 IAVKLHQTGYRVVIHYHNSA-----EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHHHHHTCEEEEEESSCH-----HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCCCeEEEEeCCch-----HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47889999999999999751 122111 1221 2458899999999 888887776 78999999
Q ss_pred CCCCC-----------------------------hhhHHHHHHHHHHhC---C------cceEec-cc-ccccCCCCCCC
Q 026978 66 VAYPQ-----------------------------FLDQLEIVHAIKVAG---N------IKRFLP-SE-FGCEEDKVRPL 105 (230)
Q Consensus 66 ~~~~~-----------------------------~~~~~~ll~Aa~~ag---~------Vkr~v~-S~-~g~~~~~~~~~ 105 (230)
++... +.+..++++++...- . ..++|. |+ .+.. +.
T Consensus 114 AG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~ 188 (288)
T 2x9g_A 114 ASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQ-----PC 188 (288)
T ss_dssp CCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTS-----CC
T ss_pred CCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccC-----CC
Confidence 98521 123445566654432 0 136663 33 2221 11
Q ss_pred CchhHHHHHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 106 PPFEAYLEKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 106 ~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+...|..+|..++.+.+. .|+.++.|+||+...
T Consensus 189 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t 229 (288)
T 2x9g_A 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL 229 (288)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccC
Confidence 1234677899887766553 489999999997754
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-06 Score=75.72 Aligned_cols=127 Identities=13% Similarity=0.136 Sum_probs=87.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------C-CCEEEEcCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------E-VDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g-~D~Vi~~~~~~--- 69 (230)
++++|+++|++|.++.|+... ++.+. .....+++++.+|++|.+++.++++ + +|+|||+++..
T Consensus 229 iA~~La~~Ga~Vvl~~r~~~~----~~l~~--~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~ 302 (454)
T 3u0b_A 229 IAEVFARDGATVVAIDVDGAA----EDLKR--VADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDK 302 (454)
T ss_dssp HHHHHHHTTCEEEEEECGGGH----HHHHH--HHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCccH----HHHHH--HHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCC
Confidence 478899999999999986421 11111 1123467899999999998888765 4 99999999864
Q ss_pred ----------------ChhhHHHHHHHHHHh----CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ----------------QFLDQLEIVHAIKVA----GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ----------------~~~~~~~ll~Aa~~a----g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++.+++... + ..+||. |+ .|.... .....|..+|..++.+.+.
T Consensus 303 ~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~-----~g~~~YaasKaal~~l~~~la~ 376 (454)
T 3u0b_A 303 LLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGN-----RGQTNYATTKAGMIGLAEALAP 376 (454)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCC-----CCCHHHHHHHHHHHHHHHHHHH
Confidence 134678888888775 4 457774 43 222111 1234677899877665542
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+..+.|.||++..
T Consensus 377 e~~~~gI~vn~v~PG~v~T 395 (454)
T 3u0b_A 377 VLADKGITINAVAPGFIET 395 (454)
T ss_dssp HHHTTTCEEEEEEECSBCC
T ss_pred HhhhcCcEEEEEEcCcccC
Confidence 689999999998754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=74.10 Aligned_cols=129 Identities=12% Similarity=0.102 Sum_probs=82.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCC----CCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcC
Q 026978 1 MVKASVSSGHKTFVYARPVTQN----SRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTV 66 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~----~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~ 66 (230)
++++|+++|++|.+++|+.... ...++.+. ...+. ...+.++.+|++|.+++.++++ ++|+|||++
T Consensus 43 ia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA 122 (322)
T 3qlj_A 43 HALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNA 122 (322)
T ss_dssp HHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4788999999999999872100 00112111 11222 2347789999999999888877 789999999
Q ss_pred CCCC-------------------hhhHHHHHHHHHHhCCc----------ceEec-cc-ccccCCCCCCCCchhHHHHHH
Q 026978 67 AYPQ-------------------FLDQLEIVHAIKVAGNI----------KRFLP-SE-FGCEEDKVRPLPPFEAYLEKK 115 (230)
Q Consensus 67 ~~~~-------------------~~~~~~ll~Aa~~ag~V----------kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K 115 (230)
+... +.+..++++++...- . .++|. |+ .+.... .....|..+|
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~~~Y~asK 196 (322)
T 3qlj_A 123 GIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW-RGLSKAGKAVDGRIINTSSGAGLQGS-----VGQGNYSAAK 196 (322)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCCEEEEEECCHHHHHCB-----TTCHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHccccCCCCCcEEEEEcCHHHccCC-----CCCccHHHHH
Confidence 8641 234556666654331 1 36764 33 332111 1234677999
Q ss_pred HHHHHHHHH-------cCCCEEEEecc
Q 026978 116 RIVRRAIEA-------AQIPYTFVSAN 135 (230)
Q Consensus 116 ~~~e~~l~~-------~gl~~tilr~g 135 (230)
..++.+.+. .|+....|.||
T Consensus 197 aal~~l~~~la~e~~~~gI~vn~v~PG 223 (322)
T 3qlj_A 197 AGIATLTLVGAAEMGRYGVTVNAIAPS 223 (322)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcccCcEEEEecCC
Confidence 988876653 58999999999
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=3.2e-06 Score=68.67 Aligned_cols=126 Identities=13% Similarity=0.135 Sum_probs=76.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH----hcCCCEEEEcCCCC-C-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI----LKEVDVVISTVAYP-Q----- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a----l~g~D~Vi~~~~~~-~----- 70 (230)
++++|+++|++|++++|+... .+.+..+...+.++...|..+.+.+.+. +.++|+|||+++.. .
T Consensus 17 ia~~l~~~G~~V~~~~r~~~~------~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~ 90 (254)
T 1zmt_A 17 SALRLSEAGHTVACHDESFKQ------KDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPID 90 (254)
T ss_dssp HHHHHHHTTCEEEECCGGGGS------HHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGG
T ss_pred HHHHHHHCCCEEEEEeCCHHH------HHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChh
Confidence 478899999999999997532 2222222211222222266665444332 33799999999854 1
Q ss_pred --------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 71 --------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 71 --------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+... ..+...|..+|..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~ 164 (254)
T 1zmt_A 91 KYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP-----WKELSTYTSARAGACTLANALSKELG 164 (254)
T ss_dssp GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC-----CCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 12444555554 4566 678874 33 23211 11234677899988876653
Q ss_pred -cCCCEEEEeccccc
Q 026978 125 -AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -~gl~~tilr~g~~~ 138 (230)
.|+.++.|+||+..
T Consensus 165 ~~gi~v~~v~PG~v~ 179 (254)
T 1zmt_A 165 EYNIPVFAIGPNYLH 179 (254)
T ss_dssp GGTCCEEEEEESSBC
T ss_pred hcCcEEEEEecCccc
Confidence 58999999999983
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.6e-06 Score=71.48 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=87.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCC------cchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSR------PSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~------p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~ 64 (230)
++++|+++|++|++++|+...... .++.+... .+. ...+.++.+|++|.+++.++++ ++|+|||
T Consensus 26 ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 105 (287)
T 3pxx_A 26 HAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVA 105 (287)
T ss_dssp HHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999997432100 01111110 111 3468899999999999988876 7899999
Q ss_pred cCCCC-----------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccc---cCC---CCCCCCchhHHHHHHHHH
Q 026978 65 TVAYP-----------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGC---EED---KVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 65 ~~~~~-----------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~---~~~---~~~~~~p~~~~~~~K~~~ 118 (230)
+++.. ++.+..++++++...- .-.++|. |+ .+. ... +..+..+...|..+|..+
T Consensus 106 nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~ 185 (287)
T 3pxx_A 106 NAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLV 185 (287)
T ss_dssp CCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHH
T ss_pred CCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCccchHHHHHHHH
Confidence 99863 1346677888876642 0246663 32 221 110 111111223577899988
Q ss_pred HHHHHH-------cCCCEEEEeccccch
Q 026978 119 RRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+.+.+. .|+....|+||+...
T Consensus 186 ~~~~~~la~e~~~~gi~vn~v~PG~v~T 213 (287)
T 3pxx_A 186 DSYTLQLAAQLAPQSIRANVIHPTNVNT 213 (287)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEESSBSS
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCcccc
Confidence 876653 489999999998754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.3e-06 Score=69.27 Aligned_cols=128 Identities=16% Similarity=0.146 Sum_probs=83.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhcC-------------CCEEEE
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILKE-------------VDVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~g-------------~D~Vi~ 64 (230)
++++|+++|+.|.++.+.... +.+ ....+. ...+.++.+|++|.+++.++++. +|+|||
T Consensus 23 ~a~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~ 97 (255)
T 3icc_A 23 IAKRLANDGALVAIHYGNRKE-----EAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILIN 97 (255)
T ss_dssp HHHHHHHTTCEEEEEESSCSH-----HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEE
T ss_pred HHHHHHHCCCeEEEEeCCchH-----HHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEE
Confidence 478999999999987554321 111 112222 23577899999999888877653 899999
Q ss_pred cCCCCC-------------------hhhHHHHHHHHHHh--CCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 65 TVAYPQ-------------------FLDQLEIVHAIKVA--GNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 65 ~~~~~~-------------------~~~~~~ll~Aa~~a--g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
+++... +.+..++++++... + ..++|. |+ .+... ......|..+|...+.+
T Consensus 98 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~Y~asKaa~~~~ 171 (255)
T 3icc_A 98 NAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRIS-----LPDFIAYSMTKGAINTM 171 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGTSC-----CTTBHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCEEEEeCChhhccC-----CCCcchhHHhHHHHHHH
Confidence 998641 23556677776653 2 246663 33 22211 11234677899988876
Q ss_pred HHH-------cCCCEEEEeccccch
Q 026978 122 IEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~~ 139 (230)
.+. .|+..+.++||+...
T Consensus 172 ~~~la~e~~~~gi~v~~v~PG~v~t 196 (255)
T 3icc_A 172 TFTLAKQLGARGITVNAILPGFVKT 196 (255)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBCC
T ss_pred HHHHHHHHHhcCeEEEEEEEeeecc
Confidence 543 589999999998754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=7.3e-06 Score=69.29 Aligned_cols=128 Identities=10% Similarity=0.114 Sum_probs=83.1
Q ss_pred CHHHHhhCCCeEEEEE-cCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHH-----------------HHHHHhc-
Q 026978 1 MVKASVSSGHKTFVYA-RPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHK-----------------KIVSILK- 57 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~-R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~-----------------~L~~al~- 57 (230)
|+++|+++|++|++++ |+.. +.+.+ +.+. ...+.++.+|++|.+ ++.++++
T Consensus 62 ia~~La~~G~~Vv~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 135 (328)
T 2qhx_A 62 IAEGLHAEGYAVCLHYHRSAA------EANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAA 135 (328)
T ss_dssp HHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCHH------HHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHH
Confidence 4788999999999999 8642 22211 1221 245889999999988 8887776
Q ss_pred ------CCCEEEEcCCCCC---------------------------------hhhHHHHHHHHH----HhCC-----cce
Q 026978 58 ------EVDVVISTVAYPQ---------------------------------FLDQLEIVHAIK----VAGN-----IKR 89 (230)
Q Consensus 58 ------g~D~Vi~~~~~~~---------------------------------~~~~~~ll~Aa~----~ag~-----Vkr 89 (230)
++|+|||+++... +.+..++++++. +.+. ..+
T Consensus 136 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~ 215 (328)
T 2qhx_A 136 CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 215 (328)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEE
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcE
Confidence 7899999998531 113344555544 3320 256
Q ss_pred Eec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 90 FLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 90 ~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
+|. |+ .+... ..+...|..+|..++.+.+. .|+.++.|+||++..
T Consensus 216 IV~isS~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T 269 (328)
T 2qhx_A 216 IINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269 (328)
T ss_dssp EEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred EEEECchhhccC-----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence 764 33 22211 11234677999988876653 589999999998753
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.28 E-value=3.2e-05 Score=62.61 Aligned_cols=122 Identities=9% Similarity=0.106 Sum_probs=82.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
++++|+++|++|.+..|+..... ......+..+.+|++|.++++++++ ++|++|+++|...
T Consensus 27 ia~~la~~Ga~Vv~~~~~~~~~~---------~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~ 97 (242)
T 4b79_A 27 IAMQFAELGAEVVALGLDADGVH---------APRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDL 97 (242)
T ss_dssp HHHHHHHTTCEEEEEESSTTSTT---------SCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCGGGGGSH
T ss_pred HHHHHHHCCCEEEEEeCCHHHHh---------hhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCCcccCCH
Confidence 46889999999999999865321 2234578899999999998888766 6799999998641
Q ss_pred ----------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCC
Q 026978 71 ----------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQI 127 (230)
Q Consensus 71 ----------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl 127 (230)
+.+. +.++..+++.| .++|. |..|..... ....|..+|..+..+-+. .|+
T Consensus 98 ~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~~-----~~~~Y~asKaav~~ltr~lA~Ela~~gI 170 (242)
T 4b79_A 98 ATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGSA-----DRPAYSASKGAIVQLTRSLACEYAAERI 170 (242)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCCS-----SCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCCC-----CCHHHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 1222 23334444444 46663 444432111 124677899888765543 689
Q ss_pred CEEEEeccccc
Q 026978 128 PYTFVSANLCG 138 (230)
Q Consensus 128 ~~tilr~g~~~ 138 (230)
....|.||+..
T Consensus 171 rVNaV~PG~i~ 181 (242)
T 4b79_A 171 RVNAIAPGWID 181 (242)
T ss_dssp EEEEEEECSBC
T ss_pred EEEEEEeCCCC
Confidence 99999999874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-05 Score=66.24 Aligned_cols=127 Identities=10% Similarity=0.121 Sum_probs=82.1
Q ss_pred CHHHHhhCCCeEEEEE-cCCCCCCCcchHhhh-hhhc---CCCeEEEEecCCCHH-----------------HHHHHhc-
Q 026978 1 MVKASVSSGHKTFVYA-RPVTQNSRPSKLEIH-KEFQ---GIGVTIIEGELDEHK-----------------KIVSILK- 57 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~-R~~~~~~~p~k~~~l-~~l~---~~gv~vv~gD~~d~~-----------------~L~~al~- 57 (230)
++++|+++|++|++++ |+.. +.+.+ +.+. ...+.++.+|++|.+ ++.++++
T Consensus 25 ia~~la~~G~~V~~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 98 (291)
T 1e7w_A 25 IAEGLHAEGYAVCLHYHRSAA------EANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAA 98 (291)
T ss_dssp HHHHHHHTTCEEEEEESSCHH------HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEcCCCHH------HHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHH
Confidence 4788999999999999 8642 22111 1221 346889999999988 8887766
Q ss_pred ------CCCEEEEcCCCCC---------------------------------hhhHHHHHHHHHH----hCC-----cce
Q 026978 58 ------EVDVVISTVAYPQ---------------------------------FLDQLEIVHAIKV----AGN-----IKR 89 (230)
Q Consensus 58 ------g~D~Vi~~~~~~~---------------------------------~~~~~~ll~Aa~~----ag~-----Vkr 89 (230)
++|+|||+++... +.+..++++++.. .+. ..+
T Consensus 99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~ 178 (291)
T 1e7w_A 99 CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 178 (291)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEE
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcE
Confidence 7899999998531 1123445555543 220 256
Q ss_pred Eec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 90 FLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 90 ~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
+|. |+ .+... ......|..+|..++.+.+. .|+.++.|+||+..
T Consensus 179 Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 231 (291)
T 1e7w_A 179 IINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 231 (291)
T ss_dssp EEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred EEEEechhhcCC-----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCcc
Confidence 663 33 33211 11234677899888776543 58999999999864
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=71.28 Aligned_cols=130 Identities=12% Similarity=0.130 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~- 69 (230)
++++|+++|++|.++.|.... .++.+.+ ..+.. ..+.++.+|++|.+++.++++ ++|+|||+++..
T Consensus 27 ia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~ 103 (262)
T 3ksu_A 27 TAKTFALESVNLVLHYHQAKD---SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL 103 (262)
T ss_dssp HHHHHTTSSCEEEEEESCGGG---HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEecCccC---HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 478899999999999886432 1122221 12222 357789999999999988876 789999999853
Q ss_pred ------------------ChhhHHHHHHHHHHh--CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 70 ------------------QFLDQLEIVHAIKVA--GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~a--g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
++.+..++++++... + -.++|. |..+..... ....|..+|..++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~~-----~~~~Y~asKaa~~~l~~~la~ 177 (262)
T 3ksu_A 104 KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAYTG-----FYSTYAGNKAPVEHYTRAASK 177 (262)
T ss_dssp SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHHHC-----CCCC-----CHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccCCC-----CCchhHHHHHHHHHHHHHHHH
Confidence 134566677777653 3 346653 332211110 112466788887766553
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 178 e~~~~gi~vn~v~PG~v~T 196 (262)
T 3ksu_A 178 ELMKQQISVNAIAPGPMDT 196 (262)
T ss_dssp HTTTTTCEEEEEEECCCCT
T ss_pred HHHHcCcEEEEEeeCCCcC
Confidence 489999999998754
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.20 E-value=9.7e-06 Score=72.93 Aligned_cols=130 Identities=11% Similarity=0.085 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEE--EcCCCC----------CCCcchHhhhhhhc--CCCeEEEEecCCCHHHHHHHhcC------CC
Q 026978 1 MVKASVSSGHKTFVY--ARPVTQ----------NSRPSKLEIHKEFQ--GIGVTIIEGELDEHKKIVSILKE------VD 60 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l--~R~~~~----------~~~p~k~~~l~~l~--~~gv~vv~gD~~d~~~L~~al~g------~D 60 (230)
+++.|+++|+.+.++ .|+... . +...+....++ ...+.++.+|++|.+++.++++. +|
T Consensus 267 lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id 344 (525)
T 3qp9_A 267 AARRLARDGAGHLLLHTTPSGSEGAEGTSGAAED--SGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVSDAHPLS 344 (525)
T ss_dssp HHHHHHHHTCCEEEEEECCCC-----------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTSCTTSCEE
T ss_pred HHHHHHHcCCCEEEEEeCCCCCCccccccccccC--HHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence 468899999985554 676422 1 10111122332 23478899999999999999875 59
Q ss_pred EEEEcCCCC-------------------ChhhHHHHHHHHHHhCC----cceEec-cc-ccccCCCCCCCCchhHHHHHH
Q 026978 61 VVISTVAYP-------------------QFLDQLEIVHAIKVAGN----IKRFLP-SE-FGCEEDKVRPLPPFEAYLEKK 115 (230)
Q Consensus 61 ~Vi~~~~~~-------------------~~~~~~~ll~Aa~~ag~----Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K 115 (230)
+|||+++.. ++.+..+|.+++..... ..+||. |+ .|..... ....|..+|
T Consensus 345 ~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~-----g~~~YaaaK 419 (525)
T 3qp9_A 345 AVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA-----GQGAYAAGT 419 (525)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT-----TCHHHHHHH
T ss_pred EEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC-----CCHHHHHHH
Confidence 999999864 13567888888876531 245663 33 2221111 134677899
Q ss_pred HHHHHHHHH---cCCCEEEEecccc
Q 026978 116 RIVRRAIEA---AQIPYTFVSANLC 137 (230)
Q Consensus 116 ~~~e~~l~~---~gl~~tilr~g~~ 137 (230)
...+.+.++ .|++++.|.||++
T Consensus 420 a~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 420 AFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp HHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred HHHHHHHHHHHhCCCCEEEEECCcc
Confidence 888777654 6899999999998
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2e-07 Score=78.95 Aligned_cols=134 Identities=13% Similarity=0.004 Sum_probs=82.7
Q ss_pred CHHHHhhCCC-------eEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---
Q 026978 1 MVKASVSSGH-------KTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--- 69 (230)
Q Consensus 1 lv~~Ll~~g~-------~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--- 69 (230)
|+..|+++|+ +|++++|.... ++.+. ...+.+..+.++ +|+.+.+++.++++|+|+|||+++..
T Consensus 20 l~~~L~~~g~~~~~~~~ev~l~D~~~~~----~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D~Vih~Ag~~~~~ 94 (327)
T 1y7t_A 20 LLFRIAAGEMLGKDQPVILQLLEIPQAM----KALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDADYALLVGAAPRKA 94 (327)
T ss_dssp HHHHHHTTTTTCTTCCEEEEEECCGGGH----HHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCSEEEECCCCCCCT
T ss_pred HHHHHHhCCCCCCCCCCEEEEEeCCCch----hhccchhhhhhccccccc-CCeEeccChHHHhCCCCEEEECCCcCCCC
Confidence 3567888886 89999875310 11111 112323233444 68877777889999999999999864
Q ss_pred ----------ChhhHHHHHHHHHHhCCcc-eEe-ccccc---cc-CCCCC-CCCchhHHHHHHHHHHHHHH----HcCCC
Q 026978 70 ----------QFLDQLEIVHAIKVAGNIK-RFL-PSEFG---CE-EDKVR-PLPPFEAYLEKKRIVRRAIE----AAQIP 128 (230)
Q Consensus 70 ----------~~~~~~~ll~Aa~~ag~Vk-r~v-~S~~g---~~-~~~~~-~~~p~~~~~~~K~~~e~~l~----~~gl~ 128 (230)
|+.+++++++++++.+.++ +++ .|.-. .. ..+.. ...|...|..+|...++++. ..|++
T Consensus 95 ~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~ 174 (327)
T 1y7t_A 95 GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTG 174 (327)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcC
Confidence 2457899999999974133 444 33210 00 00111 22344445578888877654 36999
Q ss_pred EEEEeccccch
Q 026978 129 YTFVSANLCGA 139 (230)
Q Consensus 129 ~tilr~g~~~~ 139 (230)
.+.+|+...++
T Consensus 175 ~~~vr~~~V~G 185 (327)
T 1y7t_A 175 VDRIRRMTVWG 185 (327)
T ss_dssp GGGEECCEEEB
T ss_pred hhheeeeEEEc
Confidence 99999865444
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.4e-05 Score=67.34 Aligned_cols=129 Identities=14% Similarity=0.097 Sum_probs=79.5
Q ss_pred CHHHHhhCCCeEEEEEcCCC----CCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVT----QNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~----~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~ 68 (230)
++++|+++|++|++.+|... ... +++.+. ...+...+.. +.+|+.|.+++.+++ .++|+|||+++.
T Consensus 25 ~a~~La~~Ga~Vv~~~~~~~~~~~~R~-~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 25 YALAFAERGALVVVNDLGGDFKGVGKG-SSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHHHHHHTTCEEEEECCCBCTTSCBCC-SHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCC
T ss_pred HHHHHHHCCCEEEEEcCCcccccccCC-HHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 47889999999999866421 001 223222 1223333433 357999987665554 378999999985
Q ss_pred CC-------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 69 ~~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
.. +.+..++++++ ++.+ ..|+|. |+ .+.... .+...|..+|...+.+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~-----~~~~~Y~aSK~a~~~~~~ 176 (319)
T 1gz6_A 103 LRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN-----FGQANYSAAKLGLLGLAN 176 (319)
T ss_dssp CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCC-----CCCHHHHHHHHHHHHHHH
Confidence 31 23444455554 5667 688874 33 222111 123467899998877654
Q ss_pred H-------cCCCEEEEecccc
Q 026978 124 A-------AQIPYTFVSANLC 137 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~ 137 (230)
. .|+.++.|+||+.
T Consensus 177 ~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 177 TLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp HHHHHTGGGTEEEEEEEEECC
T ss_pred HHHHHhcccCEEEEEEeCCCc
Confidence 3 5899999999976
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.15 E-value=9.9e-06 Score=59.62 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=63.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|++|++++|+. ++.+ .+...|+.++.+|.+|++.|.++ ++++|+||.+.+ +......+..
T Consensus 21 la~~L~~~g~~V~~id~~~------~~~~---~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~--~~~~n~~~~~ 89 (141)
T 3llv_A 21 LVRELTAAGKKVLAVDKSK------EKIE---LLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS--DDEFNLKILK 89 (141)
T ss_dssp HHHHHHHTTCCEEEEESCH------HHHH---HHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS--CHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECCH------HHHH---HHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC--CHHHHHHHHH
Confidence 4678889999999999963 3333 33346899999999999999887 568999999887 4455667788
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
.+++.| ..+++.
T Consensus 90 ~a~~~~-~~~iia 101 (141)
T 3llv_A 90 ALRSVS-DVYAIV 101 (141)
T ss_dssp HHHHHC-CCCEEE
T ss_pred HHHHhC-CceEEE
Confidence 889988 787764
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00013 Score=59.18 Aligned_cols=124 Identities=11% Similarity=0.170 Sum_probs=80.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.. +.+.+.. +..++..+.+|++|++++.++++ ++|++|++++...
T Consensus 18 ia~~la~~Ga~V~~~~~~~~------~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~ 90 (247)
T 3ged_A 18 ICLDFLEAGDKVCFIDIDEK------RSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGI 90 (247)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCG
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47889999999999999742 2222221 13468889999999988877654 7899999998641
Q ss_pred ----------------hhhHHHH----HHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEI----VHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~l----l~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+...+ +..+++.+ .++|. |..|.... + ....|..+|..+..+-+.
T Consensus 91 ~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~~~---~--~~~~Y~asKaal~~ltk~lA~e 163 (247)
T 3ged_A 91 LSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQSE---P--DSEAYASAKGGIVALTHALAMS 163 (247)
T ss_dssp GGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccccCC---C--CCHHHHHHHHHHHHHHHHHHHH
Confidence 2233333 33444444 45553 44443211 1 123677899887765543
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.++....|.||+..
T Consensus 164 la~~IrVN~I~PG~i~ 179 (247)
T 3ged_A 164 LGPDVLVNCIAPGWIN 179 (247)
T ss_dssp HTTTSEEEEEEECSBC
T ss_pred HCCCCEEEEEecCcCC
Confidence 47888889999764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3.7e-05 Score=62.33 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=81.2
Q ss_pred CHHHHhh---CCCeEEEEEcCCCCCCCcchHhhh-hhhc----CCCeEEEEecCCCHHHHHHHhc---------CCC--E
Q 026978 1 MVKASVS---SGHKTFVYARPVTQNSRPSKLEIH-KEFQ----GIGVTIIEGELDEHKKIVSILK---------EVD--V 61 (230)
Q Consensus 1 lv~~Ll~---~g~~V~~l~R~~~~~~~p~k~~~l-~~l~----~~gv~vv~gD~~d~~~L~~al~---------g~D--~ 61 (230)
++++|++ +|++|++++|+.. +.+.+ +.+. ...+.++.+|++|.+++.++++ ..| +
T Consensus 22 ia~~l~~~~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~ 95 (259)
T 1oaa_A 22 LAPQLARLLSPGSVMLVSARSES------MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLL 95 (259)
T ss_dssp HHHHHHTTBCTTCEEEEEESCHH------HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEE
T ss_pred HHHHHHHhhcCCCeEEEEeCCHH------HHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccE
Confidence 4678888 8999999999742 22211 1221 2347889999999998877664 358 9
Q ss_pred EEEcCCCC-----------C-----------hhhHHHHHHHHHHh------CCcceEec-cc-ccccCCCCCCCCchhHH
Q 026978 62 VISTVAYP-----------Q-----------FLDQLEIVHAIKVA------GNIKRFLP-SE-FGCEEDKVRPLPPFEAY 111 (230)
Q Consensus 62 Vi~~~~~~-----------~-----------~~~~~~ll~Aa~~a------g~Vkr~v~-S~-~g~~~~~~~~~~p~~~~ 111 (230)
|||+++.. . +.+..++++++... + ..++|. |+ .+... ..+...|
T Consensus 96 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y 169 (259)
T 1oaa_A 96 LINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-SKTVVNISSLCALQP-----YKGWGLY 169 (259)
T ss_dssp EEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-EEEEEEECCGGGTSC-----CTTCHHH
T ss_pred EEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CceEEEEcCchhcCC-----CCCccHH
Confidence 99999842 1 22456667777553 3 346764 33 33211 1123467
Q ss_pred HHHHHHHHHHHHH-----cCCCEEEEeccccc
Q 026978 112 LEKKRIVRRAIEA-----AQIPYTFVSANLCG 138 (230)
Q Consensus 112 ~~~K~~~e~~l~~-----~gl~~tilr~g~~~ 138 (230)
..+|..++.+.+. .++....|.||+..
T Consensus 170 ~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 170 CAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp HHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 7999998877654 34777788888764
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.8e-05 Score=59.22 Aligned_cols=84 Identities=10% Similarity=0.107 Sum_probs=62.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|++|++++|+.. ++.+.+......|++++.||.+|++.|.++ ++++|+||.+++.. .....+..
T Consensus 18 la~~L~~~g~~V~vid~~~~-----~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~ 90 (153)
T 1id1_A 18 TILQLNQRGQNVTVISNLPE-----DDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND--ADNAFVVL 90 (153)
T ss_dssp HHHHHHHTTCCEEEEECCCH-----HHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH--HHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCh-----HHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh--HHHHHHHH
Confidence 46788899999999999631 222233332246899999999999999988 99999999998653 34555667
Q ss_pred HHHHh-CCcceEec
Q 026978 80 AIKVA-GNIKRFLP 92 (230)
Q Consensus 80 Aa~~a-g~Vkr~v~ 92 (230)
.+++. + ..+++.
T Consensus 91 ~a~~~~~-~~~ii~ 103 (153)
T 1id1_A 91 SAKDMSS-DVKTVL 103 (153)
T ss_dssp HHHHHTS-SSCEEE
T ss_pred HHHHHCC-CCEEEE
Confidence 77776 6 667664
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.6e-05 Score=61.64 Aligned_cols=126 Identities=12% Similarity=0.107 Sum_probs=83.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|..|.+..|+.. +++. .++++. ..+..+.+|++|++++.++++ +.|++|+.+|...
T Consensus 23 iA~~la~~Ga~Vv~~~~~~~------~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~ 96 (254)
T 4fn4_A 23 IAKKFALNDSIVVAVELLED------RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMD 96 (254)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence 46889999999999999743 2222 122322 347789999999999887654 6899999998531
Q ss_pred --------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+ .+.++..+++.+ -.++|. |..|..... ....|..+|..+..+-+.
T Consensus 97 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~-----~~~~Y~asKaal~~ltr~ 170 (254)
T 4fn4_A 97 GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGF-----AGAPYTVAKHGLIGLTRS 170 (254)
T ss_dssp TTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSS-----SCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCC-----CChHHHHHHHHHHHHHHH
Confidence 122 344555566666 467763 444432111 224677899887765543
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 171 lA~ela~~gIrVN~V~PG~i~ 191 (254)
T 4fn4_A 171 IAAHYGDQGIRAVAVLPGTVK 191 (254)
T ss_dssp HHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHhhhhCeEEEEEEeCCCC
Confidence 68999999999874
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00018 Score=58.77 Aligned_cols=127 Identities=11% Similarity=0.072 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|..|.+..|+.... +..+.+... ...+..+.+|++|.+++.++++ ++|++|+++|...
T Consensus 23 ia~~la~~Ga~Vv~~~r~~~~~---~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~ 98 (258)
T 4gkb_A 23 ISMRLAEERAIPVVFARHAPDG---AFLDALAQR-QPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG 98 (258)
T ss_dssp HHHHHHHTTCEEEEEESSCCCH---HHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHcCCEEEEEECCcccH---HHHHHHHhc-CCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 3678999999999999986431 122222222 3568899999999888776654 6899999998641
Q ss_pred ---------------hhhHH----HHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ---------------FLDQL----EIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ---------------~~~~~----~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+.. .++..+++.+ .++|. |..|..... ....|..+|..+..+-+.
T Consensus 99 ~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~~-----~~~~Y~asKaav~~ltr~lA~el 171 (258)
T 4gkb_A 99 LDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTGQG-----NTSGYCASKGAQLALTREWAVAL 171 (258)
T ss_dssp TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHCCS-----SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccCCC-----CchHHHHHHHHHHHHHHHHHHHh
Confidence 12233 3333444444 46663 444432111 124677899888766543
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 172 a~~gIrVN~V~PG~i~ 187 (258)
T 4gkb_A 172 REHGVRVNAVIPAEVM 187 (258)
T ss_dssp GGGTCEEEEEEECSBC
T ss_pred cccCeEEEEEecCCCC
Confidence 68999999999875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.5e-05 Score=62.02 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=75.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~-------- 69 (230)
++++|+++|++|.++.|+. . +|++|.+++.++++ ++|+|||+++..
T Consensus 22 ~a~~l~~~G~~V~~~~r~~----------------~-------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~ 78 (223)
T 3uce_A 22 LAKQLESEHTIVHVASRQT----------------G-------LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVD 78 (223)
T ss_dssp HHHHHCSTTEEEEEESGGG----------------T-------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTT
T ss_pred HHHHHHHCCCEEEEecCCc----------------c-------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCccc
Confidence 4678888999998888741 1 79999999888876 689999999854
Q ss_pred ------------ChhhHHHHHHHHHHhCCc--ceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-----cCCC
Q 026978 70 ------------QFLDQLEIVHAIKVAGNI--KRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-----AQIP 128 (230)
Q Consensus 70 ------------~~~~~~~ll~Aa~~ag~V--kr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-----~gl~ 128 (230)
++.+..++++++...- . .++|. |+ .+... ..+...|..+|..++.+.+. ..+.
T Consensus 79 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~i~ 152 (223)
T 3uce_A 79 VEVTQAKYAFDTKFWGAVLAAKHGARYL-KQGGSITLTSGMLSRKV-----VANTYVKAAINAAIEATTKVLAKELAPIR 152 (223)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHGGGE-EEEEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred CCHHHHHhhheeeeeeHHHHHHHHHhhc-cCCeEEEEecchhhccC-----CCCchHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 1235666777776542 2 25653 33 22211 11234677999988876654 2488
Q ss_pred EEEEeccccch
Q 026978 129 YTFVSANLCGA 139 (230)
Q Consensus 129 ~tilr~g~~~~ 139 (230)
...|.||+...
T Consensus 153 vn~v~PG~v~t 163 (223)
T 3uce_A 153 VNAISPGLTKT 163 (223)
T ss_dssp EEEEEECSBCS
T ss_pred EEEEEeCCCcc
Confidence 88999988754
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.8e-05 Score=56.09 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=61.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|++|++++|+. ++.+ .+...+..++.+|.+|.+.+.++ ++++|+||++++.. ......+++
T Consensus 21 ~a~~l~~~g~~v~~~d~~~------~~~~---~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-~~~~~~~~~ 90 (144)
T 2hmt_A 21 IVKELHRMGHEVLAVDINE------EKVN---AYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-IQASTLTTL 90 (144)
T ss_dssp HHHHHHHTTCCCEEEESCH------HHHH---TTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC-HHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCH------HHHH---HHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc-hHHHHHHHH
Confidence 3577888999999999863 2222 23345778899999999988887 88999999998752 234456788
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
++++.| +++++.
T Consensus 91 ~~~~~~-~~~ii~ 102 (144)
T 2hmt_A 91 LLKELD-IPNIWV 102 (144)
T ss_dssp HHHHTT-CSEEEE
T ss_pred HHHHcC-CCeEEE
Confidence 889999 887764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00019 Score=58.69 Aligned_cols=120 Identities=16% Similarity=0.154 Sum_probs=78.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.... + ...-.+.+|++|.+++.++++ ++|++||+++...
T Consensus 27 ia~~la~~Ga~V~~~~r~~~~~-----------~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~ 93 (261)
T 4h15_A 27 TVSLFLELGAQVLTTARARPEG-----------L--PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAG 93 (261)
T ss_dssp HHHHHHHTTCEEEEEESSCCTT-----------S--CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCS
T ss_pred HHHHHHHcCCEEEEEECCchhC-----------C--CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCC
Confidence 4688999999999999975321 1 123368899999988777655 6899999987421
Q ss_pred ------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ .+.++..+++.| -.++|. |..|.... +. ....|..+|..+..+-+.
T Consensus 94 ~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~---~~-~~~~Y~asKaal~~lt~~lA 168 (261)
T 4h15_A 94 GGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPL---PE-STTAYAAAKAALSTYSKAMS 168 (261)
T ss_dssp SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---TT-TCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCC---CC-ccHHHHHHHHHHHHHHHHHH
Confidence 122 344455556666 467763 33332211 00 123455889888765543
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 169 ~Ela~~gIrVN~V~PG~i~ 187 (261)
T 4h15_A 169 KEVSPKGVRVVRVSPGWIE 187 (261)
T ss_dssp HHHGGGTEEEEEEEECCBC
T ss_pred HHhhhhCeEEEEEeCCCcC
Confidence 68999999999875
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.97 E-value=7.1e-05 Score=66.04 Aligned_cols=87 Identities=23% Similarity=0.233 Sum_probs=62.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ---------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~---------- 70 (230)
++++|++.|++|++++|+. ++++.+... ..+++.+.+|++|.+++.++++++|+|||+++...
T Consensus 18 ia~~L~~~G~~V~v~~R~~------~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~ 90 (450)
T 1ff9_A 18 TLDVLTDSGIKVTVACRTL------ESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIR 90 (450)
T ss_dssp HHHHHHTTTCEEEEEESSH------HHHHHTTTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHH
T ss_pred HHHHHHhCcCEEEEEECCH------HHHHHHHHh-cCCceEEEeecCCHHHHHHHHcCCcEEEECCccccchHHHHHHHh
Confidence 3678888999999999973 343332211 12578899999999999999999999999998631
Q ss_pred -----------hhhHHHHHHHHHHhCCcceEecccccc
Q 026978 71 -----------FLDQLEIVHAIKVAGNIKRFLPSEFGC 97 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~Vkr~v~S~~g~ 97 (230)
.....+++++|+++| ++ ++ +++|.
T Consensus 91 ~g~~vvd~~~~~~~~~~l~~aA~~aG-v~-~i-~g~g~ 125 (450)
T 1ff9_A 91 QKKHVVTTSYVSPAMMELDQAAKDAG-IT-VM-NEIGL 125 (450)
T ss_dssp HTCEEEESSCCCHHHHHTHHHHHHTT-CE-EE-CSCBB
T ss_pred CCCeEEEeecccHHHHHHHHHHHHCC-Ce-EE-eCCCC
Confidence 124678889999999 76 33 44454
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00011 Score=59.65 Aligned_cols=132 Identities=11% Similarity=0.062 Sum_probs=79.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+..... +-.+.+.++....+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 24 iA~~la~~Ga~Vvi~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~ 101 (256)
T 4fs3_A 24 VAKVLDQLGAKLVFTYRKERSRK--ELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMED 101 (256)
T ss_dssp HHHHHHHTTCEEEEEESSGGGHH--HHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGG
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccc
Confidence 46889999999999999753211 00111223333468899999999988877654 6899999998531
Q ss_pred ---------hh-----------hHHHHHHHHHHhC-CcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ---------FL-----------DQLEIVHAIKVAG-NIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ---------~~-----------~~~~ll~Aa~~ag-~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
.+ +...+..++...- .-.++|. |..|.... .....|..+|..+..+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~-----~~~~~Y~asKaal~~ltr~lA~ 176 (256)
T 4fs3_A 102 LRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV-----QNYNVMGVAKASLEANVKYLAL 176 (256)
T ss_dssp GTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC-----TTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc-----ccchhhHHHHHHHHHHHHHHHH
Confidence 00 1122223332211 0134553 33332111 1224577899888765543
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 177 Ela~~gIrVN~V~PG~i~T 195 (256)
T 4fs3_A 177 DLGPDNIRVNAISAGPIRT 195 (256)
T ss_dssp HHGGGTEEEEEEEECCCCS
T ss_pred HhCccCeEEEEEecCCCCC
Confidence 689999999998753
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0001 Score=59.26 Aligned_cols=122 Identities=14% Similarity=0.159 Sum_probs=74.1
Q ss_pred CHHHHhhCCCeEEEE-E--cCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHh----cCCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVY-A--RPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSIL----KEVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l-~--R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al----~g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|+++ . |+.. +.+.+. .+ .+.++. |..+.+.+.+.+ .++|+|||+++...
T Consensus 17 ia~~l~~~G~~V~~~~~~~r~~~------~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 86 (244)
T 1zmo_A 17 AVEALTQDGYTVVCHDASFADAA------ERQRFESEN--PGTIAL--AEQKPERLVDATLQHGEAIDTIVSNDYIPRPM 86 (244)
T ss_dssp HHHHHHHTTCEEEECCGGGGSHH------HHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSSCEEEEEECCCCCTTG
T ss_pred HHHHHHHCCCEEEEecCCcCCHH------HHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 478899999999999 6 8632 222221 22 355543 555544443332 36899999997421
Q ss_pred --------------------hhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+..++++++ ++.+ ..++|. |+ .+.... .+...|..+|..++.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK~a~~~~~~~ 160 (244)
T 1zmo_A 87 NRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL-----AYNPLYGPARAATVALVES 160 (244)
T ss_dssp GGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTCTTHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC-----CCchHHHHHHHHHHHHHHH
Confidence 22344555554 4566 678874 33 332111 1223577899888876553
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+.++.|+||+..
T Consensus 161 la~e~~~~gi~v~~v~PG~v~ 181 (244)
T 1zmo_A 161 AAKTLSRDGILLYAIGPNFFN 181 (244)
T ss_dssp HHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHhhcCcEEEEEeeCCCc
Confidence 58999999999764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.90 E-value=4.3e-05 Score=61.46 Aligned_cols=124 Identities=22% Similarity=0.225 Sum_probs=71.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHH---HHHh---cCCCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKI---VSIL---KEVDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L---~~al---~g~D~Vi~~~~~~~---- 70 (230)
++++|++ |+.|.+++|+.. +.+.+.. ..+++++.+|++|.++. .+.+ .++|+|||+++...
T Consensus 21 ~a~~l~~-g~~v~~~~r~~~------~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~ 91 (245)
T 3e9n_A 21 IVKDLSR-DHIVYALGRNPE------HLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTI 91 (245)
T ss_dssp HHHHHTT-TSEEEEEESCHH------HHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC--------
T ss_pred HHHHHhC-CCeEEEEeCCHH------HHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCch
Confidence 3677776 999999999742 3333333 35789999999887541 2222 37899999998641
Q ss_pred ---------------hhhHHHHHHHH----HHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ---------------FLDQLEIVHAI----KVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ---------------~~~~~~ll~Aa----~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+..++++++ ++.+ .++|. |..+... ..+...|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~~~la~e~ 164 (245)
T 3e9n_A 92 EAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGP-----HPGNTIYAASKHALRGLADAFRKEE 164 (245)
T ss_dssp --CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC---------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccC-----CCCchHHHHHHHHHHHHHHHHHHHh
Confidence 22334444443 4444 46653 3333211 11234677999998877653
Q ss_pred --cCCCEEEEeccccchh
Q 026978 125 --AQIPYTFVSANLCGAY 140 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~ 140 (230)
.|+..+.|+||+....
T Consensus 165 ~~~gi~v~~v~PG~v~t~ 182 (245)
T 3e9n_A 165 ANNGIRVSTVSPGPTNTP 182 (245)
T ss_dssp GGGTCEEEEEEECCC---
T ss_pred hhcCeEEEEEecCCccCc
Confidence 5899999999987653
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00023 Score=57.71 Aligned_cols=129 Identities=10% Similarity=0.113 Sum_probs=83.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
++++|+++|.+|.+..|+... +..+.+... ...+..+.+|++|++++.++++ ++|++|+++|...
T Consensus 25 iA~~la~~Ga~Vvi~~r~~~~----~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~ 99 (247)
T 4hp8_A 25 IAVGLAAAGAEVVCAARRAPD----ETLDIIAKD-GGNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFS 99 (247)
T ss_dssp HHHHHHHTTCEEEEEESSCCH----HHHHHHHHT-TCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCCCCCCGGGCC
T ss_pred HHHHHHHcCCEEEEEeCCcHH----HHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCCCCCCccccc
Confidence 468899999999999997431 112222222 2457889999999998888776 5799999998641
Q ss_pred -----------hhhHHHH----HHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cC
Q 026978 71 -----------FLDQLEI----VHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQ 126 (230)
Q Consensus 71 -----------~~~~~~l----l~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~g 126 (230)
+.+...+ +..+++.|.-.++|. |..|.... + ....|..+|..+..+-+. .|
T Consensus 100 ~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---~--~~~~Y~asKaav~~ltr~lA~Ela~~g 174 (247)
T 4hp8_A 100 ELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---I--RVPSYTAAKHGVAGLTKLLANEWAAKG 174 (247)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---S--SCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC---C--CChHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 2233333 444444441246763 44443211 1 123677899888765543 68
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
|....|.||++.-
T Consensus 175 IrVNaV~PG~i~T 187 (247)
T 4hp8_A 175 INVNAIAPGYIET 187 (247)
T ss_dssp EEEEEEEECSBCS
T ss_pred eEEEEEeeCCCCC
Confidence 9999999998753
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00018 Score=59.24 Aligned_cols=126 Identities=18% Similarity=0.191 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|.+|.+..|+.. +++. .+++ ...+..+.+|++|.+++.++++ ++|++|+++|...
T Consensus 45 iA~~la~~Ga~V~i~~r~~~------~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~ 117 (273)
T 4fgs_A 45 AAKRFVAEGARVFITGRRKD------VLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML 117 (273)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 46889999999999999743 2222 2234 3467889999999988887655 5799999998641
Q ss_pred -----------------hhhHHHHHHHHHHhC-CcceEe--cccccccCCCCCCCCchhHHHHHHHHHHHHHHH------
Q 026978 71 -----------------FLDQLEIVHAIKVAG-NIKRFL--PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~ag-~Vkr~v--~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------ 124 (230)
+.+...+.+++...= .-.++| .|..|.... + ....|..+|..+..+-+.
T Consensus 118 ~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~---~--~~~~Y~asKaav~~ltr~lA~Ela 192 (273)
T 4fgs_A 118 PLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT---P--AFSVYAASKAALRSFARNWILDLK 192 (273)
T ss_dssp CTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---T--TCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---C--CchHHHHHHHHHHHHHHHHHHHhc
Confidence 234445555443310 002344 243443211 1 124677999888776553
Q ss_pred -cCCCEEEEeccccc
Q 026978 125 -AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 193 ~~gIrVN~V~PG~i~ 207 (273)
T 4fgs_A 193 DRGIRINTLSPGPTE 207 (273)
T ss_dssp TSCEEEEEEEECSBC
T ss_pred ccCeEEEEEeeCCCC
Confidence 57889999998764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00014 Score=59.37 Aligned_cols=127 Identities=9% Similarity=0.091 Sum_probs=81.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|.+|.+..|+.. +.+ ..+.+.. ..+..+.+|++|++++.++++ ++|++|+++|...
T Consensus 25 ia~~la~~Ga~Vvi~~~~~~------~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 25 YAEGLAAAGARVILNDIRAT------LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQY 98 (255)
T ss_dssp HHHHHHHTTCEEEECCSCHH------HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC
Confidence 46889999999999998643 211 1223322 357788999999998877655 5799999998641
Q ss_pred -------------------hhhHHH----HHHHHHHh-CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 -------------------FLDQLE----IVHAIKVA-GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~~~~~----ll~Aa~~a-g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+... ++..+++. + -.++|. |..|.... + ....|..+|..+..+-+.
T Consensus 99 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-~G~IVnisS~~~~~~~---~--~~~~Y~asKaal~~ltr~ 172 (255)
T 4g81_D 99 RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-GGKIINIGSLTSQAAR---P--TVAPYTAAKGGIKMLTCS 172 (255)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEEECCGGGTSBC---T--TCHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-CCEEEEEeehhhcCCC---C--CchhHHHHHHHHHHHHHH
Confidence 223333 33444333 3 356763 33443211 1 123677899887765543
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 173 lA~ela~~gIrVN~V~PG~i~T 194 (255)
T 4g81_D 173 MAAEWAQFNIQTNAIGPGYILT 194 (255)
T ss_dssp HHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHhcccCeEEEEEeeCCCCC
Confidence 689999999998753
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00014 Score=52.85 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=59.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|++|++++|+. ++.+.+.. ..+++++.+|..+.+.+.++ ++++|+||++++.. .....+.+
T Consensus 19 ~a~~L~~~g~~v~~~d~~~------~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--~~~~~~~~ 88 (140)
T 1lss_A 19 LAKSLSEKGHDIVLIDIDK------DICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--EVNLMSSL 88 (140)
T ss_dssp HHHHHHHTTCEEEEEESCH------HHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHhCCCeEEEEECCH------HHHHHHHH--hcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--hHHHHHHH
Confidence 3577888999999999863 23332211 23788899999999888766 78999999998653 33456677
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
++++.+ ++++|.
T Consensus 89 ~~~~~~-~~~ii~ 100 (140)
T 1lss_A 89 LAKSYG-INKTIA 100 (140)
T ss_dssp HHHHTT-CCCEEE
T ss_pred HHHHcC-CCEEEE
Confidence 888888 788774
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00026 Score=66.74 Aligned_cols=129 Identities=10% Similarity=0.167 Sum_probs=84.1
Q ss_pred CHHHHh-hCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhcC------CCEEEEcCCCC-
Q 026978 1 MVKASV-SSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILKE------VDVVISTVAYP- 69 (230)
Q Consensus 1 lv~~Ll-~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~g------~D~Vi~~~~~~- 69 (230)
+++.|+ ++|. .|.+++|+.... +.-.+.+++++..| +.++.+|++|.+++.++++. +|+|||+++..
T Consensus 546 iA~~la~~~Ga~~vvl~~R~~~~~--~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~~ 623 (795)
T 3slk_A 546 VARHLVIERGVRNLVLVSRRGPAA--SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLD 623 (795)
T ss_dssp HHHHHHHTSSCCEEEEEESSGGGS--TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHHHHcCCcEEEEeccCccch--HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcCC
Confidence 367888 7898 588889984322 11112233444344 67899999999999998874 59999999864
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHH---HHHcC
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRA---IEAAQ 126 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~---l~~~g 126 (230)
++.+..+|.+++ ... . +||. |+ .|..... ....|..+|.-.+.+ ++..|
T Consensus 624 ~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~-l-~iV~~SS~ag~~g~~-----g~~~YaAaka~~~alA~~~~~~G 695 (795)
T 3slk_A 624 DGVSESLTVERLDQVLRPKVDGARNLLELI-DPD-V-ALVLFSSVSGVLGSG-----GQGNYAAANSFLDALAQQRQSRG 695 (795)
T ss_dssp CCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTT-S-EEEEEEETHHHHTCS-----SCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhC-C-EEEEEccHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHcC
Confidence 245678888876 223 4 6663 33 3321111 134677888655443 34479
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
++.+.|.||++..
T Consensus 696 i~v~sI~pG~v~t 708 (795)
T 3slk_A 696 LPTRSLAWGPWAE 708 (795)
T ss_dssp CCEEEEEECCCSC
T ss_pred CeEEEEECCeECc
Confidence 9999999998864
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0002 Score=53.48 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=59.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
+++.|.+.|++|++++|+.. +.+ .+. ..|+.++.+|..+.+.|.++ ++++|+||.+++.. .....++
T Consensus 34 la~~L~~~g~~V~vid~~~~------~~~---~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~--~~~~~~~ 102 (155)
T 2g1u_A 34 IANLASSSGHSVVVVDKNEY------AFH---RLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD--STNFFIS 102 (155)
T ss_dssp HHHHHHHTTCEEEEEESCGG------GGG---GSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH--HHHHHHH
T ss_pred HHHHHHhCCCeEEEEECCHH------HHH---HHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc--HHHHHHH
Confidence 35678889999999999743 222 333 45788899999998888877 88999999998753 3445666
Q ss_pred HHHHH-hCCcceEec
Q 026978 79 HAIKV-AGNIKRFLP 92 (230)
Q Consensus 79 ~Aa~~-ag~Vkr~v~ 92 (230)
+.++. .+ ..+++.
T Consensus 103 ~~~~~~~~-~~~iv~ 116 (155)
T 2g1u_A 103 MNARYMFN-VENVIA 116 (155)
T ss_dssp HHHHHTSC-CSEEEE
T ss_pred HHHHHHCC-CCeEEE
Confidence 77777 66 677764
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00014 Score=55.72 Aligned_cols=80 Identities=9% Similarity=0.089 Sum_probs=59.8
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH--hcCCCEEEEcCCCCChhhHHHH
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI--LKEVDVVISTVAYPQFLDQLEI 77 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a--l~g~D~Vi~~~~~~~~~~~~~l 77 (230)
+++.|.+. |++|++++|+. ++.+ .+...|++++.||.+|.+.|.++ ++++|+||.+++. ......+
T Consensus 54 ~a~~L~~~~g~~V~vid~~~------~~~~---~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~--~~~~~~~ 122 (183)
T 3c85_A 54 AYDELRARYGKISLGIEIRE------EAAQ---QHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH--HQGNQTA 122 (183)
T ss_dssp HHHHHHHHHCSCEEEEESCH------HHHH---HHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS--HHHHHHH
T ss_pred HHHHHHhccCCeEEEEECCH------HHHH---HHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC--hHHHHHH
Confidence 35778888 99999999973 3433 23346899999999999999888 8899999998764 3445566
Q ss_pred HHHHHHhCCcceEe
Q 026978 78 VHAIKVAGNIKRFL 91 (230)
Q Consensus 78 l~Aa~~ag~Vkr~v 91 (230)
+..+++.+...+++
T Consensus 123 ~~~~~~~~~~~~ii 136 (183)
T 3c85_A 123 LEQLQRRNYKGQIA 136 (183)
T ss_dssp HHHHHHTTCCSEEE
T ss_pred HHHHHHHCCCCEEE
Confidence 77888876334554
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00032 Score=59.98 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=58.4
Q ss_pred HHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHH
Q 026978 4 ASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAIKV 83 (230)
Q Consensus 4 ~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ 83 (230)
.+|++.++|++.+|+.. +++ .+ ...++.+..|.+|.++|.++++++|+||++++.. ....++++|.+
T Consensus 33 ~~L~~~~~v~~~~~~~~------~~~---~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~---~~~~v~~~~~~ 99 (365)
T 3abi_A 33 WDLKDEFDVYIGDVNNE------NLE---KV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF---LGFKSIKAAIK 99 (365)
T ss_dssp HHHTTTSEEEEEESCHH------HHH---HH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG---GHHHHHHHHHH
T ss_pred HHHhcCCCeEEEEcCHH------HHH---HH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc---ccchHHHHHHh
Confidence 45667799999998642 322 23 3467788999999999999999999999999874 35689999999
Q ss_pred hCCcceEec
Q 026978 84 AGNIKRFLP 92 (230)
Q Consensus 84 ag~Vkr~v~ 92 (230)
+| ++++-
T Consensus 100 ~g--~~yvD 106 (365)
T 3abi_A 100 SK--VDMVD 106 (365)
T ss_dssp HT--CEEEE
T ss_pred cC--cceEe
Confidence 99 56764
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.63 E-value=9e-05 Score=67.87 Aligned_cols=129 Identities=13% Similarity=0.110 Sum_probs=74.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCC----CCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQ----NSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~----~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|.+++|.... .. .++++. ...+...+... .+|+.|.+++.++++ .+|+|||++|.
T Consensus 35 iA~~La~~Ga~Vv~~~r~~~~~~~~~~-~~~~~~~~~~i~~~~~~~-~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 35 YALLFAERGAKVVVNDLGGTHSGDGAS-QRAADIVVDEIRKAGGEA-VADYNSVIDGAKVIETAIKAFGRVDILVNNAGI 112 (613)
T ss_dssp HHHHHHHTTCEEEEC---------------CHHHHHHHHHHTTCCE-EECCCCGGGHHHHHC----------CEECCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcccccccCC-HHHHHHHHHHHHHhCCeE-EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCC
Confidence 478899999999999883210 00 112211 22333344443 479999888877776 57999999986
Q ss_pred C-------------------ChhhHHHHHHHH----HHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 69 P-------------------QFLDQLEIVHAI----KVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 69 ~-------------------~~~~~~~ll~Aa----~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
. |+.+..++++++ ++.+ ..|+|. |+ .|.... .....|..+|..++.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~-----~~~~~Y~asKaal~~lt~ 186 (613)
T 3oml_A 113 LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGN-----FGQVNYTAAKMGLIGLAN 186 (613)
T ss_dssp CCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCC-----TTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC-----CCChHHHHHHHHHHHHHH
Confidence 4 123455566665 5566 578774 33 332111 123467799988877654
Q ss_pred H-------cCCCEEEEecccc
Q 026978 124 A-------AQIPYTFVSANLC 137 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~ 137 (230)
. .|+....|.||..
T Consensus 187 ~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 187 TVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp HHHHHHGGGTEEEEEEEEC--
T ss_pred HHHHHhCccCeEEEEEECCCC
Confidence 3 5899999999864
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00051 Score=54.22 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=60.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|++|++++|+. ++.+.+.. ..|++++.||.+|.+.|.++ ++++|+||.+++.. .....+..
T Consensus 15 la~~L~~~g~~v~vid~~~------~~~~~l~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~ 84 (218)
T 3l4b_C 15 LARSMLSRKYGVVIINKDR------ELCEEFAK--KLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD--EVNLFIAQ 84 (218)
T ss_dssp HHHHHHHTTCCEEEEESCH------HHHHHHHH--HSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHhCCCeEEEEECCH------HHHHHHHH--HcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc--HHHHHHHH
Confidence 4678899999999999873 34333221 24889999999999999987 88999999987653 23444566
Q ss_pred HHHH-hCCcceEec
Q 026978 80 AIKV-AGNIKRFLP 92 (230)
Q Consensus 80 Aa~~-ag~Vkr~v~ 92 (230)
.+++ .+ ..++|.
T Consensus 85 ~a~~~~~-~~~iia 97 (218)
T 3l4b_C 85 LVMKDFG-VKRVVS 97 (218)
T ss_dssp HHHHTSC-CCEEEE
T ss_pred HHHHHcC-CCeEEE
Confidence 6676 67 788774
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00058 Score=50.09 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=57.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|++|++++|+. ++.+ .+...|+.++.||.++.+.|.++ ++++|+||.+++.. .....++.
T Consensus 22 la~~L~~~g~~v~vid~~~------~~~~---~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~--~~n~~~~~ 90 (140)
T 3fwz_A 22 LGEKLLASDIPLVVIETSR------TRVD---ELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG--YEAGEIVA 90 (140)
T ss_dssp HHHHHHHTTCCEEEEESCH------HHHH---HHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCH------HHHH---HHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh--HHHHHHHH
Confidence 3678888999999999973 3433 33457999999999999999876 67899999988753 22334555
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
.+++.....++|
T Consensus 91 ~a~~~~~~~~ii 102 (140)
T 3fwz_A 91 SARAKNPDIEII 102 (140)
T ss_dssp HHHHHCSSSEEE
T ss_pred HHHHHCCCCeEE
Confidence 666653134555
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00025 Score=56.60 Aligned_cols=77 Identities=9% Similarity=0.158 Sum_probs=58.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.+.|+ |++++|+. ++.+ .+. .|++++.||.+|.+.|.++ ++++|+||.+++.. .....+..
T Consensus 24 la~~L~~~g~-v~vid~~~------~~~~---~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--~~n~~~~~ 90 (234)
T 2aef_A 24 CLRELRGSEV-FVLAEDEN------VRKK---VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SETIHCIL 90 (234)
T ss_dssp HHHHSTTSEE-EEEESCGG------GHHH---HHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHhCCe-EEEEECCH------HHHH---HHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--HHHHHHHH
Confidence 3677888899 99998863 2332 333 6899999999999999988 89999999987642 34556677
Q ss_pred HHHHhCCcc-eEe
Q 026978 80 AIKVAGNIK-RFL 91 (230)
Q Consensus 80 Aa~~ag~Vk-r~v 91 (230)
.|++.+ .+ ++|
T Consensus 91 ~a~~~~-~~~~ii 102 (234)
T 2aef_A 91 GIRKID-ESVRII 102 (234)
T ss_dssp HHHHHC-SSSEEE
T ss_pred HHHHHC-CCCeEE
Confidence 888888 66 655
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00037 Score=61.67 Aligned_cols=61 Identities=18% Similarity=0.288 Sum_probs=47.8
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++++|++. |++|++++|+. +|++.+... .+++.+.+|+.|.+++.++++++|+||++++..
T Consensus 38 ia~~L~~~~g~~V~v~~R~~------~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 38 VIDTLAANDDINVTVACRTL------ANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp HHHHHHTSTTEEEEEEESSH------HHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred HHHHHHhCCCCeEEEEECCH------HHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 35778887 78999999973 344433221 367888999999999999999999999998864
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00042 Score=60.21 Aligned_cols=85 Identities=13% Similarity=0.208 Sum_probs=62.2
Q ss_pred CHHHHhhCCC---eEEEEEcCCCCCCCcchHhhhh-hhcC---CCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCCh
Q 026978 1 MVKASVSSGH---KTFVYARPVTQNSRPSKLEIHK-EFQG---IGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQF 71 (230)
Q Consensus 1 lv~~Ll~~g~---~V~~l~R~~~~~~~p~k~~~l~-~l~~---~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~~ 71 (230)
+++.|++.|. +|++.+|+.. |++.+. .+.. .+++.+.+|++|.+++.+++++ +|+|||+++..
T Consensus 16 ia~~L~~~g~~~~~V~v~~r~~~------~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~-- 87 (405)
T 4ina_A 16 VAHKMAMNREVFSHITLASRTLS------KCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPY-- 87 (405)
T ss_dssp HHHHHHTCTTTCCEEEEEESCHH------HHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGG--
T ss_pred HHHHHHhCCCCceEEEEEECCHH------HHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcc--
Confidence 3677888883 8999999743 433322 2222 2588999999999999999997 89999998753
Q ss_pred hhHHHHHHHHHHhCCcceEecccc
Q 026978 72 LDQLEIVHAIKVAGNIKRFLPSEF 95 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vkr~v~S~~ 95 (230)
....++++|.++| +..+..+.+
T Consensus 88 -~~~~v~~a~l~~g-~~vvD~a~~ 109 (405)
T 4ina_A 88 -QDLTIMEACLRTG-VPYLDTANY 109 (405)
T ss_dssp -GHHHHHHHHHHHT-CCEEESSCC
T ss_pred -cChHHHHHHHHhC-CCEEEecCC
Confidence 3578899999999 664434443
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00095 Score=58.16 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=60.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.+.|++|++++++ |++.+ .+...|+.++.||.++.+.|.++ ++++|+||.+.+. ......++.
T Consensus 19 va~~L~~~g~~vvvId~d------~~~v~---~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~--~~~n~~i~~ 87 (413)
T 3l9w_A 19 TGRLLLSSGVKMVVLDHD------PDHIE---TLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD--PQTNLQLTE 87 (413)
T ss_dssp HHHHHHHTTCCEEEEECC------HHHHH---HHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS--HHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECC------HHHHH---HHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC--hHHHHHHHH
Confidence 467888999999999987 33433 34456899999999999999988 8899999998864 345566677
Q ss_pred HHHHhCCcc-eEe
Q 026978 80 AIKVAGNIK-RFL 91 (230)
Q Consensus 80 Aa~~ag~Vk-r~v 91 (230)
.+++.+ .+ ++|
T Consensus 88 ~ar~~~-p~~~Ii 99 (413)
T 3l9w_A 88 MVKEHF-PHLQII 99 (413)
T ss_dssp HHHHHC-TTCEEE
T ss_pred HHHHhC-CCCeEE
Confidence 777776 44 444
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00097 Score=56.19 Aligned_cols=77 Identities=9% Similarity=0.130 Sum_probs=58.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|+ |++++++ |++.+ +...++.++.||.+|++.|.++ ++++|+|+.+.+. .+....+..
T Consensus 130 l~~~L~~~g~-v~vid~~------~~~~~----~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~--d~~n~~~~~ 196 (336)
T 1lnq_A 130 CLRELRGSEV-FVLAEDE------NVRKK----VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES--DSETIHCIL 196 (336)
T ss_dssp HHTTGGGSCE-EEEESCG------GGHHH----HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS--HHHHHHHHH
T ss_pred HHHHHHhCCc-EEEEeCC------hhhhh----HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc--cHHHHHHHH
Confidence 3577888999 9999876 33433 3347899999999999999988 8999999998764 345566677
Q ss_pred HHHHhCCcc-eEe
Q 026978 80 AIKVAGNIK-RFL 91 (230)
Q Consensus 80 Aa~~ag~Vk-r~v 91 (230)
.+++.+ .+ +++
T Consensus 197 ~ar~~~-~~~~ii 208 (336)
T 1lnq_A 197 GIRKID-ESVRII 208 (336)
T ss_dssp HHHTTC-TTSEEE
T ss_pred HHHHHC-CCCeEE
Confidence 788887 65 555
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0012 Score=54.46 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=47.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcC-CCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQG-IGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~-~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
++.+|++.|++|+++.|+.. +++.+. .+.. .+++++.+|++|.+++.++++.+|+|||+++.
T Consensus 135 ia~~L~~~G~~V~i~~R~~~------~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 135 SAALLAGEGAEVVLCGRKLD------KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred HHHHHHHCcCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCc
Confidence 36789999999999999732 333221 2211 25788899999999999999999999999974
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0098 Score=62.48 Aligned_cols=132 Identities=13% Similarity=0.099 Sum_probs=85.2
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC--
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGELDEHKKIVSILK------EVDVVISTVAYP-- 69 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~-- 69 (230)
+++.|+++|.. |.++.|+.... +...+.++.++..| +.++.+|++|.+++.++++ .+|+|||+++..
T Consensus 1900 ia~~la~~Ga~~vvl~~R~~~~~--~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~ 1977 (2512)
T 2vz8_A 1900 LAQWLRLRGAQKLVLTSRSGIRT--GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRD 1977 (2512)
T ss_dssp HHHHHHHTTCCEEEEECSSCCCS--HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC---
T ss_pred HHHHHHHCCCCEEEEEeCCCcch--HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCC
Confidence 46889999987 77778875432 11111223333334 6678899999998877664 579999999853
Q ss_pred -----------------ChhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHH---HcC
Q 026978 70 -----------------QFLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIE---AAQ 126 (230)
Q Consensus 70 -----------------~~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---~~g 126 (230)
++.+..++.+++...- ...+||. |+ .|..... ....|..+|..+..+.+ ..|
T Consensus 1978 ~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~-----g~~~Y~aaKaal~~l~~~rr~~G 2052 (2512)
T 2vz8_A 1978 AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA-----GQANYGFANSAMERICEKRRHDG 2052 (2512)
T ss_dssp -------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-----TCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-----CcHHHHHHHHHHHHHHHHHHHCC
Confidence 2457788878776642 0356763 43 3321111 12467789988876655 579
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
++.+.+..|.+.+
T Consensus 2053 l~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2053 LPGLAVQWGAIGD 2065 (2512)
T ss_dssp SCCCEEEECCBCT
T ss_pred CcEEEEEccCcCC
Confidence 9988888777654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.011 Score=48.45 Aligned_cols=77 Identities=10% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCCEEEEcCCCC---------------------ChhhHHHHHHHHHHhC-CcceEec--ccccccCCCCCCCCch-hHHH
Q 026978 58 EVDVVISTVAYP---------------------QFLDQLEIVHAIKVAG-NIKRFLP--SEFGCEEDKVRPLPPF-EAYL 112 (230)
Q Consensus 58 g~D~Vi~~~~~~---------------------~~~~~~~ll~Aa~~ag-~Vkr~v~--S~~g~~~~~~~~~~p~-~~~~ 112 (230)
++|+|||+++.. |+.+..++++++...= .-.++|. |..+.... + .. ..|.
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---~--~~~~~Y~ 193 (297)
T 1d7o_A 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII---P--GYGGGMS 193 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---T--TCTTTHH
T ss_pred CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC---C--CcchHHH
Confidence 789999999741 1235566777776531 0135653 33332111 1 11 2577
Q ss_pred HHHHHHHHHHH--------HcCCCEEEEeccccch
Q 026978 113 EKKRIVRRAIE--------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 113 ~~K~~~e~~l~--------~~gl~~tilr~g~~~~ 139 (230)
.+|..++.+.+ ..|+..+.|+||+...
T Consensus 194 asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T 228 (297)
T 1d7o_A 194 SAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS 228 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred HHHHHHHHHHHHHHHHhCcccCcEEEEEecccccc
Confidence 89988776543 1589999999998753
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0082 Score=50.29 Aligned_cols=131 Identities=8% Similarity=0.031 Sum_probs=74.4
Q ss_pred CHHHHhhCCCeEEEEEcCC---------CCCCCcchHhhhhh--hcCCCeEEEEecCCCH--H-----------------
Q 026978 1 MVKASVSSGHKTFVYARPV---------TQNSRPSKLEIHKE--FQGIGVTIIEGELDEH--K----------------- 50 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~---------~~~~~p~k~~~l~~--l~~~gv~vv~gD~~d~--~----------------- 50 (230)
++++|+++|++|.+..|+. .... ..+. .... -....+.++.+|+++. +
T Consensus 20 iA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~-~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~ 97 (329)
T 3lt0_A 20 IAKELSKRNVKIIFGIWPPVYNIFMKNYKNGK-FDND-MIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQN 97 (329)
T ss_dssp HHHHHHHTTCEEEEEECHHHHHHHHHHHHTTT-TTGG-GBCSSSCBCCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCS
T ss_pred HHHHHHHCCCEEEEEecCccccccccchHHHH-HHHH-HHHhhcccccccccccccccccchhhhhhhhcccccccccCH
Confidence 4788999999999776553 1110 0000 0000 0112367888998776 5
Q ss_pred -HHHHHhc-------CCCEEEEcCCCC---------------------ChhhHHHHHHHHHHhCCc--ceEec--ccccc
Q 026978 51 -KIVSILK-------EVDVVISTVAYP---------------------QFLDQLEIVHAIKVAGNI--KRFLP--SEFGC 97 (230)
Q Consensus 51 -~L~~al~-------g~D~Vi~~~~~~---------------------~~~~~~~ll~Aa~~ag~V--kr~v~--S~~g~ 97 (230)
++.++++ .+|++||++|.. ++.+...+.+++...= . .++|. |..|.
T Consensus 98 ~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m-~~~g~Iv~isS~~~~ 176 (329)
T 3lt0_A 98 YTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM-KPQSSIISLTYHASQ 176 (329)
T ss_dssp CSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEECGGGT
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hhCCeEEEEeCcccc
Confidence 5444433 689999999842 1234455566554431 1 25553 33332
Q ss_pred cCCCCCCCCchh-HHHHHHHHHHHHHH-------H-cCCCEEEEeccccch
Q 026978 98 EEDKVRPLPPFE-AYLEKKRIVRRAIE-------A-AQIPYTFVSANLCGA 139 (230)
Q Consensus 98 ~~~~~~~~~p~~-~~~~~K~~~e~~l~-------~-~gl~~tilr~g~~~~ 139 (230)
... + ... .|..+|..++.+.+ . .|+....|.||+..-
T Consensus 177 ~~~---~--~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T 222 (329)
T 3lt0_A 177 KVV---P--GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp SCC---T--TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred CCC---C--cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeec
Confidence 211 1 112 57788988765543 3 589999999998753
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0089 Score=49.68 Aligned_cols=77 Identities=8% Similarity=0.038 Sum_probs=44.6
Q ss_pred CCCEEEEcCCCC---------------------ChhhHHHHHHHHHHhC-CcceEec--ccccccCCCCCCCCch-hHHH
Q 026978 58 EVDVVISTVAYP---------------------QFLDQLEIVHAIKVAG-NIKRFLP--SEFGCEEDKVRPLPPF-EAYL 112 (230)
Q Consensus 58 g~D~Vi~~~~~~---------------------~~~~~~~ll~Aa~~ag-~Vkr~v~--S~~g~~~~~~~~~~p~-~~~~ 112 (230)
++|+|||+++.. ++.+..++++++...= .-.++|. |..+.... + .. ..|.
T Consensus 120 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---~--~~~~~Y~ 194 (315)
T 2o2s_A 120 NIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV---P--GYGGGMS 194 (315)
T ss_dssp SEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC---T--TCCTTHH
T ss_pred CCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC---C--CccHHHH
Confidence 789999999742 1234556666664420 0135553 33332111 1 11 2577
Q ss_pred HHHHHHHHHHH--------HcCCCEEEEeccccch
Q 026978 113 EKKRIVRRAIE--------AAQIPYTFVSANLCGA 139 (230)
Q Consensus 113 ~~K~~~e~~l~--------~~gl~~tilr~g~~~~ 139 (230)
.+|..++.+.+ ..|+....|.||+..-
T Consensus 195 asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T 229 (315)
T 2o2s_A 195 SAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS 229 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHhCcccCeEEEEEecccccc
Confidence 89988776543 2589999999998753
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.069 Score=46.12 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=44.2
Q ss_pred CHHHHhh-CCCeEEEEEcCCCCCCCcch--------Hhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCE
Q 026978 1 MVKASVS-SGHKTFVYARPVTQNSRPSK--------LEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDV 61 (230)
Q Consensus 1 lv~~Ll~-~g~~V~~l~R~~~~~~~p~k--------~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~ 61 (230)
++++|++ +|..|.++.|+..... .+ .+.+. .++ ...+..+.+|++|.+++.++++ .+|+
T Consensus 63 iA~~LA~g~GA~Vv~~~~~~~~~~--~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDi 140 (405)
T 3zu3_A 63 ARITAAFGCGADTLGVFFERPGEE--GKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQ 140 (405)
T ss_dssp HHHHHHHHHCCEEEEEECCCCCBT--TBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHhcCCEEEEEeCCchhhh--hhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678888 9999999988754321 01 00011 112 2346778999999988877655 5799
Q ss_pred EEEcCCC
Q 026978 62 VISTVAY 68 (230)
Q Consensus 62 Vi~~~~~ 68 (230)
+|++++.
T Consensus 141 LVNNAG~ 147 (405)
T 3zu3_A 141 VIYSLAS 147 (405)
T ss_dssp EEECCCC
T ss_pred EEEcCcc
Confidence 9999875
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.011 Score=49.69 Aligned_cols=81 Identities=9% Similarity=0.116 Sum_probs=53.2
Q ss_pred HHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeE-EEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------
Q 026978 2 VKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVT-IIEGELDEHKKIVSILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 2 v~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~-vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-------- 70 (230)
+..|+.+| ++|++++++.. . .++. .+...... -+.+ +.+..++.++++|+|+|||+++...
T Consensus 25 a~~L~~~g~~~ev~l~Di~~~-~---~~~~---dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~d 96 (326)
T 1smk_A 25 AMLMKMNPLVSVLHLYDVVNA-P---GVTA---DISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDD 96 (326)
T ss_dssp HHHHHHCTTEEEEEEEESSSH-H---HHHH---HHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCCCCCCSSCCCSH
T ss_pred HHHHHhCCCCCEEEEEeCCCc-H---hHHH---HhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHH
Confidence 45677888 89999987642 0 0111 22221111 1222 3446678899999999999998542
Q ss_pred -----hhhHHHHHHHHHHhCCcceEe
Q 026978 71 -----FLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 71 -----~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
+...+++++++++.+ .+.+|
T Consensus 97 l~~~N~~~~~~i~~~i~~~~-p~~~v 121 (326)
T 1smk_A 97 LFKINAGIVKTLCEGIAKCC-PRAIV 121 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCeEE
Confidence 357888999999998 77655
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.1 Score=45.30 Aligned_cols=65 Identities=14% Similarity=0.128 Sum_probs=43.8
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcch--------Hhhhhhh-c--CCCeEEEEecCCCHHHHHHHhc-------CCCEEE
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSK--------LEIHKEF-Q--GIGVTIIEGELDEHKKIVSILK-------EVDVVI 63 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k--------~~~l~~l-~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi 63 (230)
+.+|.++|++|.++.|+..... .+ .+.+..+ + ...+..+.+|++|.+++.++++ ++|++|
T Consensus 79 a~ala~~Ga~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLV 156 (418)
T 4eue_A 79 SVAFGGPEAHTIGVSYETGATD--RRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFV 156 (418)
T ss_dssp HHHHSSSCCEEEEEECCCCCCS--SCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhCCCEEEEEecCcchhh--hcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4567778999999999764321 01 1111111 1 2347789999999988777654 579999
Q ss_pred EcCCC
Q 026978 64 STVAY 68 (230)
Q Consensus 64 ~~~~~ 68 (230)
|+++.
T Consensus 157 nNAG~ 161 (418)
T 4eue_A 157 YSLAA 161 (418)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99875
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0069 Score=50.41 Aligned_cols=76 Identities=9% Similarity=0.020 Sum_probs=36.3
Q ss_pred CCCEEEEcCCCC---------------------ChhhHHHHHHHHHHhC-CcceEec--ccccccCCCCCCCCch--hHH
Q 026978 58 EVDVVISTVAYP---------------------QFLDQLEIVHAIKVAG-NIKRFLP--SEFGCEEDKVRPLPPF--EAY 111 (230)
Q Consensus 58 g~D~Vi~~~~~~---------------------~~~~~~~ll~Aa~~ag-~Vkr~v~--S~~g~~~~~~~~~~p~--~~~ 111 (230)
++|+|||+++.. |+.+..++++++...= .-.++|. |..+.... |. ..|
T Consensus 133 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y 206 (319)
T 2ptg_A 133 QIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------PGYGGGM 206 (319)
T ss_dssp CEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------
T ss_pred CCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc------Cccchhh
Confidence 789999998732 1234556666665430 0135553 32222110 22 246
Q ss_pred HHHHHHHHHHHH-------H-cCCCEEEEeccccch
Q 026978 112 LEKKRIVRRAIE-------A-AQIPYTFVSANLCGA 139 (230)
Q Consensus 112 ~~~K~~~e~~l~-------~-~gl~~tilr~g~~~~ 139 (230)
..+|..++.+.+ . .|+....|.||+...
T Consensus 207 ~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T 242 (319)
T 2ptg_A 207 SSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS 242 (319)
T ss_dssp ------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence 678877665443 2 589999999998753
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.013 Score=58.21 Aligned_cols=129 Identities=18% Similarity=0.232 Sum_probs=74.7
Q ss_pred CHHHHhhCCCeEEEEE-cCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------------CCCEEE
Q 026978 1 MVKASVSSGHKTFVYA-RPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------------EVDVVI 63 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~-R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------------g~D~Vi 63 (230)
++++|+++|+.|.+++ |+..... +-.+.+ ..+. ...+.++.+|++|.+++.++++ .+|+||
T Consensus 493 IAr~LA~~GA~VVL~~~R~~e~le--e~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILV 570 (1688)
T 2pff_A 493 VLQGLLQGGAKVVVTTSRFSKQVT--DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAII 570 (1688)
T ss_dssp HHHHHHHHTCEEEEEESSCSTTTT--THHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEE
T ss_pred HHHHHHHCcCEEEEEeCCCHHHHH--HHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEE
Confidence 4788999999999884 5543221 111111 1111 1246789999999988887763 489999
Q ss_pred EcCCCCC----------------------hhhHHHHHHHHHHhCCc-----ceEec-cc-ccccCCCCCCCCchhHHHHH
Q 026978 64 STVAYPQ----------------------FLDQLEIVHAIKVAGNI-----KRFLP-SE-FGCEEDKVRPLPPFEAYLEK 114 (230)
Q Consensus 64 ~~~~~~~----------------------~~~~~~ll~Aa~~ag~V-----kr~v~-S~-~g~~~~~~~~~~p~~~~~~~ 114 (230)
|++|... +.+..+++++++..... .+||. |+ .|... ....|..+
T Consensus 571 NNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-------g~saYaAS 643 (1688)
T 2pff_A 571 PFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-------GDGMYSES 643 (1688)
T ss_dssp CCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-------CBTTHHHH
T ss_pred ECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-------CchHHHHH
Confidence 9998531 12334555666332101 35653 33 33211 12357899
Q ss_pred HHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 115 KRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 115 K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
|..++.+... ..+..+.|.||++.
T Consensus 644 KAAL~aLttrsLAeEla~~IRVNaVaPG~V~ 674 (1688)
T 2pff_A 644 KLSLETLFNRWHSESWANQLTVCGAIIGWTR 674 (1688)
T ss_dssp HHHHTHHHHHTTTSSCTTTEECCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEEECcCc
Confidence 9998887322 12555556777765
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.024 Score=49.94 Aligned_cols=81 Identities=5% Similarity=0.141 Sum_probs=57.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.++||+|+++.++ +++.+.+.. ..++.++.||-++++.|.+| ++.+|++|.+.+.- +...-...
T Consensus 18 la~~L~~~~~~v~vId~d------~~~~~~~~~--~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D--e~Nl~~~~ 87 (461)
T 4g65_A 18 LAENLVGENNDITIVDKD------GDRLRELQD--KYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD--ETNMAACQ 87 (461)
T ss_dssp HHHHTCSTTEEEEEEESC------HHHHHHHHH--HSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECC------HHHHHHHHH--hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh--HHHHHHHH
Confidence 467788899999999987 334433321 34789999999999999998 77899999876542 22233344
Q ss_pred HHHHh-CCcceEec
Q 026978 80 AIKVA-GNIKRFLP 92 (230)
Q Consensus 80 Aa~~a-g~Vkr~v~ 92 (230)
.|++. + +++.+.
T Consensus 88 ~Ak~~~~-~~~~ia 100 (461)
T 4g65_A 88 VAFTLFN-TPNRIA 100 (461)
T ss_dssp HHHHHHC-CSSEEE
T ss_pred HHHHhcC-Ccccee
Confidence 56664 6 777663
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.042 Score=50.03 Aligned_cols=123 Identities=13% Similarity=0.124 Sum_probs=72.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCC--eEEEEecC-CCHHHHHHH----hcCCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG--VTIIEGEL-DEHKKIVSI----LKEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~g--v~vv~gD~-~d~~~L~~a----l~g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|.. .++ ..+.+...| +..+.+|+ .+.+.+.+. +-.+|++||++|...
T Consensus 338 ~A~~la~~Ga~Vv~~~~~~-----~~~--~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~ 410 (604)
T 2et6_A 338 YAKWFAKYGAKVVVNDFKD-----ATK--TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRS 410 (604)
T ss_dssp HHHHHHHTTCEEEEECSSC-----CHH--HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEeCcc-----HHH--HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 4678999999999887632 111 112232223 44566787 555544332 347899999998631
Q ss_pred ----------------hhhHHH----HHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLE----IVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~----ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+... ++..+++.+ -.++|. |..|..... ....|..+|..+..+.+.
T Consensus 411 ~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~-----~~~~Y~asKaal~~lt~~la~E 484 (604)
T 2et6_A 411 FAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNF-----GQANYSSSKAGILGLSKTMAIE 484 (604)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCT-----TBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC-----CChhHHHHHHHHHHHHHHHHHH
Confidence 223333 444445554 457763 333322110 124677899887765442
Q ss_pred ---cCCCEEEEeccc
Q 026978 125 ---AQIPYTFVSANL 136 (230)
Q Consensus 125 ---~gl~~tilr~g~ 136 (230)
.|+....|.||.
T Consensus 485 l~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 485 GAKNNIKVNIVAPHA 499 (604)
T ss_dssp HGGGTEEEEEEEECC
T ss_pred hCccCeEEEEEcCCC
Confidence 689999999984
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.033 Score=56.66 Aligned_cols=129 Identities=18% Similarity=0.219 Sum_probs=76.0
Q ss_pred CHHHHhhCCCeEEEEE-cCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------------CCCEEE
Q 026978 1 MVKASVSSGHKTFVYA-RPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------------EVDVVI 63 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~-R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------------g~D~Vi 63 (230)
+++.|+++|+.|.+++ |+.... .+-.+.+ ..+. ...+.++.+|++|.+++.++++ .+|+||
T Consensus 692 IA~~La~~GA~Vvl~~~R~~~~l--~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLV 769 (1887)
T 2uv8_A 692 VLQGLLQGGAKVVVTTSRFSKQV--TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAII 769 (1887)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHH--HHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEE
T ss_pred HHHHHHHCCCEEEEEecCCHHHH--HHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEE
Confidence 4788999999999885 542210 0000111 1121 2247789999999998887763 489999
Q ss_pred EcCCCCC----------------------hhhHHHHHHHHHHhCCc-----ceEec-cc-ccccCCCCCCCCchhHHHHH
Q 026978 64 STVAYPQ----------------------FLDQLEIVHAIKVAGNI-----KRFLP-SE-FGCEEDKVRPLPPFEAYLEK 114 (230)
Q Consensus 64 ~~~~~~~----------------------~~~~~~ll~Aa~~ag~V-----kr~v~-S~-~g~~~~~~~~~~p~~~~~~~ 114 (230)
|++|... +.+...++++++..... .++|. |+ .|... ....|..+
T Consensus 770 NNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-------g~~aYaAS 842 (1887)
T 2uv8_A 770 PFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-------GDGMYSES 842 (1887)
T ss_dssp ECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-------CBTTHHHH
T ss_pred ECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-------CCchHHHH
Confidence 9998531 11234455665433211 35663 33 33211 12357789
Q ss_pred HHHHHHH-HH---H---cCCCEEEEeccccc
Q 026978 115 KRIVRRA-IE---A---AQIPYTFVSANLCG 138 (230)
Q Consensus 115 K~~~e~~-l~---~---~gl~~tilr~g~~~ 138 (230)
|..++.+ .+ . ..+..+.|.||+..
T Consensus 843 KAAL~~Lttr~lA~ela~~IrVNaV~PG~V~ 873 (1887)
T 2uv8_A 843 KLSLETLFNRWHSESWANQLTVCGAIIGWTR 873 (1887)
T ss_dssp HHHGGGHHHHHHHSSCTTTEEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 9888776 22 1 12778888898875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.033 Score=56.53 Aligned_cols=130 Identities=13% Similarity=0.167 Sum_probs=74.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-----------CCCEEEEcC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-----------EVDVVISTV 66 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-----------g~D~Vi~~~ 66 (230)
++++|+++|+.|.+++|...... .+-.+.+ ..+.. ..+.++.+|++|.+++.++++ .+|+|||++
T Consensus 669 IAr~LA~~GA~VVl~~~R~~~~l-~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNA 747 (1878)
T 2uv9_A 669 VLQGLLSGGAKVIVTTSRFSRQV-TEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFA 747 (1878)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHH-HHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECC
T ss_pred HHHHHHHCCCEEEEEecCChHHH-HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCc
Confidence 47889999999998864321100 0000111 12222 247789999999999887763 489999999
Q ss_pred CCCC----------------------hhhHHHHHHHHHHhCC-----cceEec--ccccccCCCCCCCCchhHHHHHHHH
Q 026978 67 AYPQ----------------------FLDQLEIVHAIKVAGN-----IKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 67 ~~~~----------------------~~~~~~ll~Aa~~ag~-----Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~ 117 (230)
|... +.+..+++++++.... -.+||. |..|... . ...|..+|..
T Consensus 748 Gi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g-----~~aYaASKAA 820 (1878)
T 2uv9_A 748 AIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--N-----DGLYSESKLA 820 (1878)
T ss_dssp CCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--C-----CSSHHHHHHH
T ss_pred ccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--C-----chHHHHHHHH
Confidence 8531 1123344444322210 135553 3333211 0 1357789988
Q ss_pred HHHHHHH-------cCCCEEEEeccccc
Q 026978 118 VRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 118 ~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
++.+.+. .++..+.|.||+..
T Consensus 821 L~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 821 LETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp HTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 7766432 13788888999875
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.086 Score=45.81 Aligned_cols=65 Identities=18% Similarity=0.127 Sum_probs=43.9
Q ss_pred CHHHHhh-CCCeEEEEEcCCCCCCCcch------------HhhhhhhcCCCeEEEEecCCCHHHHHHHh--------cCC
Q 026978 1 MVKASVS-SGHKTFVYARPVTQNSRPSK------------LEIHKEFQGIGVTIIEGELDEHKKIVSIL--------KEV 59 (230)
Q Consensus 1 lv~~Ll~-~g~~V~~l~R~~~~~~~p~k------------~~~l~~l~~~gv~vv~gD~~d~~~L~~al--------~g~ 59 (230)
++++|.+ +|.+|.++.|+..... .+ .+.+... ...+..+.+|++|.+++.+++ -++
T Consensus 77 iA~~LA~~~GA~Vv~~~r~~~~~~--~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~I 153 (422)
T 3s8m_A 77 SRITAAFGFGADTLGVFFEKPGTA--SKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDAFSDAARAQVIELIKTEMGGQV 153 (422)
T ss_dssp HHHHHHHHHCCEEEEEECCCCCCS--SSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHHHHHHHHHHHHHSCSCE
T ss_pred HHHHHHHhCCCEEEEEeCCchhhh--hhhcccccchhHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3678888 9999999999865431 11 0111111 224678899999988876654 357
Q ss_pred CEEEEcCCC
Q 026978 60 DVVISTVAY 68 (230)
Q Consensus 60 D~Vi~~~~~ 68 (230)
|++|++++.
T Consensus 154 DiLVNNAG~ 162 (422)
T 3s8m_A 154 DLVVYSLAS 162 (422)
T ss_dssp EEEEECCCC
T ss_pred CEEEEcCcc
Confidence 999999865
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.062 Score=48.97 Aligned_cols=128 Identities=14% Similarity=0.057 Sum_probs=70.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCC----CCCcchHhh-hhhhcCCCeEEEEecCCCHH---HHH----HHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQ----NSRPSKLEI-HKEFQGIGVTIIEGELDEHK---KIV----SILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~----~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~---~L~----~al~g~D~Vi~~~~~ 68 (230)
++++|+++|++|.+.+|+... .. .++++. .+++...|.+. .+|+.|.+ .+. +.+-.+|++|+++|.
T Consensus 24 ~A~~la~~Ga~Vv~~~~~~~~~~~gr~-~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi 101 (604)
T 2et6_A 24 YSLEFAKLGAKVVVNDLGGALNGQGGN-SKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAVKNFGTVHVIINNAGI 101 (604)
T ss_dssp HHHHHHHTTCEEEEECC------------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCEEEEEeCCccccccccc-hHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 367899999999998876410 00 112222 22333334443 35666653 332 223468999999986
Q ss_pred CC-------------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 69 ~~-------------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
.. +.+. +.++..+++.+ -.|+|. |..|..... ....|..+|..+..+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~-----~~~~Y~asKaal~~lt~ 175 (604)
T 2et6_A 102 LRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNF-----GQANYASAKSALLGFAE 175 (604)
T ss_dssp CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----TBHHHHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC-----CchHHHHHHHHHHHHHH
Confidence 31 2233 33444455555 467773 333322111 12467789988776554
Q ss_pred H-------cCCCEEEEeccc
Q 026978 124 A-------AQIPYTFVSANL 136 (230)
Q Consensus 124 ~-------~gl~~tilr~g~ 136 (230)
. .|+....|.|+.
T Consensus 176 ~la~El~~~gIrVn~v~Pg~ 195 (604)
T 2et6_A 176 TLAKEGAKYNIKANAIAPLA 195 (604)
T ss_dssp HHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHhCccCeEEEEEccCC
Confidence 2 689999999974
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.029 Score=46.52 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=47.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
+++.|++.||+|++..|+. +|.+. +...|+++. +++.++.+++|+||.|++..
T Consensus 18 mA~~L~~~G~~v~v~dr~~------~~~~~---l~~~Ga~~a-------~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~ 81 (300)
T 3obb_A 18 MATNLLKAGYLLNVFDLVQ------SAVDG---LVAAGASAA-------RSARDAVQGADVVISMLPASQHVEGLYLDDD 81 (300)
T ss_dssp HHHHHHHTTCEEEEECSSH------HHHHH---HHHTTCEEC-------SSHHHHHTTCSEEEECCSCHHHHHHHHHSSS
T ss_pred HHHHHHhCCCeEEEEcCCH------HHHHH---HHHcCCEEc-------CCHHHHHhcCCceeecCCchHHHHHHHhchh
Confidence 3678999999999999973 34443 334455432 23455666777777766542
Q ss_pred ------------------ChhhHHHHHHHHHHhCCcceEe
Q 026978 70 ------------------QFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 70 ------------------~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
..+..+.+.+.+++.| + +|+
T Consensus 82 g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G-~-~~l 119 (300)
T 3obb_A 82 GLLAHIAPGTLVLECSTIAPTSARKIHAAARERG-L-AML 119 (300)
T ss_dssp SSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT-C-EEE
T ss_pred hhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC-C-EEE
Confidence 2356777888888888 4 465
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.025 Score=46.83 Aligned_cols=52 Identities=15% Similarity=0.362 Sum_probs=31.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|+++||+|+++.|+..... .+...|+++. +++.++++++|+||.+++.
T Consensus 20 mA~~L~~~G~~V~v~dr~~~~~~---------~l~~~G~~~~-------~s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 20 IAEILLEAGYELVVWNRTASKAE---------PLTKLGATVV-------ENAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp HHHHHHHTTCEEEEC-------C---------TTTTTTCEEC-------SSGGGGCCTTCEEEECCSS
T ss_pred HHHHHHHCCCeEEEEeCCHHHHH---------HHHHcCCeEe-------CCHHHHHhcCCceeeeccc
Confidence 36789999999999999865332 3344566542 2345667778888887765
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.22 Score=43.74 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=57.4
Q ss_pred HHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH--H
Q 026978 4 ASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH--A 80 (230)
Q Consensus 4 ~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~--A 80 (230)
..|+++++|+++-++ ++|++.+..- -+++.++.||-+|++-|.++ +..+|+++.+.+.- ..|++- .
T Consensus 252 ~~L~~~~~v~iIE~d------~~r~~~la~~-l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D----e~Ni~~~ll 320 (461)
T 4g65_A 252 KRLEQTYSVKLIERN------LQRAEKLSEE-LENTIVFCGDAADQELLTEENIDQVDVFIALTNED----ETNIMSAML 320 (461)
T ss_dssp HHHTTTSEEEEEESC------HHHHHHHHHH-CTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCH----HHHHHHHHH
T ss_pred HHhhhcCceEEEecC------HHHHHHHHHH-CCCceEEeccccchhhHhhcCchhhcEEEEcccCc----HHHHHHHHH
Confidence 345778999999886 3455554432 36789999999999999887 77899999987652 334433 5
Q ss_pred HHHhCCcceEec
Q 026978 81 IKVAGNIKRFLP 92 (230)
Q Consensus 81 a~~ag~Vkr~v~ 92 (230)
||+.| ++|.|.
T Consensus 321 Ak~~g-v~kvIa 331 (461)
T 4g65_A 321 AKRMG-AKKVMV 331 (461)
T ss_dssp HHHTT-CSEEEE
T ss_pred HHHcC-Cccccc
Confidence 78899 999874
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=94.48 E-value=0.14 Score=46.06 Aligned_cols=75 Identities=8% Similarity=0.019 Sum_probs=57.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.+.|++|+++.++..... .+ . .++.||.+|.+.|.++ ++.+|+||.+.+.. +....+..
T Consensus 363 la~~L~~~g~~v~vid~d~~~~~---------~~---~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d--~~ni~~~~ 427 (565)
T 4gx0_A 363 AAAFLDRKPVPFILIDRQESPVC---------ND---H-VVVYGDATVGQTLRQAGIDRASGIIVTTNDD--STNIFLTL 427 (565)
T ss_dssp HHHHHHHTTCCEEEEESSCCSSC---------CS---S-CEEESCSSSSTHHHHHTTTSCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECChHHHh---------hc---C-CEEEeCCCCHHHHHhcCccccCEEEEECCCc--hHHHHHHH
Confidence 46788999999999998865321 12 2 7999999999999887 66899999988752 45555666
Q ss_pred HHHHhCCcc-eEe
Q 026978 80 AIKVAGNIK-RFL 91 (230)
Q Consensus 80 Aa~~ag~Vk-r~v 91 (230)
.|++.| .+ ++|
T Consensus 428 ~ak~l~-~~~~ii 439 (565)
T 4gx0_A 428 ACRHLH-SHIRIV 439 (565)
T ss_dssp HHHHHC-SSSEEE
T ss_pred HHHHHC-CCCEEE
Confidence 788888 66 665
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.025 Score=47.57 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=36.3
Q ss_pred ecCCCHHHHHHHhcCCCEEEEcCCCCC-------------hhhHHHHHHHHHHh-CCcc-eEec
Q 026978 44 GELDEHKKIVSILKEVDVVISTVAYPQ-------------FLDQLEIVHAIKVA-GNIK-RFLP 92 (230)
Q Consensus 44 gD~~d~~~L~~al~g~D~Vi~~~~~~~-------------~~~~~~ll~Aa~~a-g~Vk-r~v~ 92 (230)
+|+....++.++++|+|+|||+++... +...+++++++++. + .+ +||.
T Consensus 69 ~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~-p~a~ii~ 131 (329)
T 1b8p_A 69 AGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVAS-RNIKVLV 131 (329)
T ss_dssp EEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred CcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence 466555678899999999999998642 34578899999998 4 45 6663
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.5 Score=39.95 Aligned_cols=98 Identities=15% Similarity=0.199 Sum_probs=62.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
+++|.+.|++|.+++.+... |.. .+ .-..+..|+.|.+.|.+.++++|+|+....... ..+++.+
T Consensus 17 ~~a~~~~G~~v~~~~~~~~~---~~~-----~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~~e~~~----~~~~~~l 81 (380)
T 3ax6_A 17 TLEAKKMGFYVIVLDPTPRS---PAG-----QV---ADEQIVAGFFDSERIEDLVKGSDVTTYDLEHID----VQTLKKL 81 (380)
T ss_dssp HHHHHHTTCEEEEEESSTTC---TTG-----GG---SSEEEECCTTCHHHHHHHHHTCSEEEESCSCSC----HHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCCCC---chh-----hh---CceEEECCCCCHHHHHHHHhcCCEEEecccCCC----HHHHHHH
Confidence 56788899999999875432 100 11 124567899999999999999999987543222 3345666
Q ss_pred HHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 026978 82 KVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP 128 (230)
Q Consensus 82 ~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~ 128 (230)
.+.| ++ +.++. ........|....+.+++.|++
T Consensus 82 ~~~g-i~-~~~~~------------~~~~~~~dK~~~~~~l~~~gip 114 (380)
T 3ax6_A 82 YNEG-YK-IHPSP------------YTLEIIQDKFVQKEFLKKNGIP 114 (380)
T ss_dssp HHTT-CE-ESSCH------------HHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHCC-Ce-ECCCH------------HHHHHhcCHHHHHHHHHHcCCC
Confidence 7778 65 33221 0123345677777777766654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.092 Score=41.86 Aligned_cols=58 Identities=16% Similarity=0.264 Sum_probs=39.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHH----HHHHhcCCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKK----IVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~----L~~al~g~D~Vi~~~~~~~ 70 (230)
|+++++++|++|+++.|+.+.. + ....++.++ |+...++ +.+.+.++|++|++++..+
T Consensus 35 iA~~~~~~Ga~V~lv~~~~~~~--~--------~~~~~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 35 ITETLLSAGYEVCLITTKRALK--P--------EPHPNLSIR--EITNTKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHTTCEEEEEECTTSCC--C--------CCCTTEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHCCCEEEEEeCCcccc--c--------cCCCCeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 4789999999999999976421 1 012466665 4445443 4445568999999999754
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=93.43 E-value=0.2 Score=37.09 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=41.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCC-CcchHhhhhhhcCCCe--EEEEecCCCH--HHHHHHhc------CCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNS-RPSKLEIHKEFQGIGV--TIIEGELDEH--KKIVSILK------EVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~-~p~k~~~l~~l~~~gv--~vv~gD~~d~--~~L~~al~------g~D~Vi~~~~~~ 69 (230)
+++|.+.|.+|.+..|+..... .++-.+ .++..|. ..+.+|++++ +++.++++ |-|++|||++..
T Consensus 33 a~~La~~Ga~vvi~~r~~~e~~~~~~~~~---~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnAgg~ 108 (157)
T 3gxh_A 33 FSLLKQAGVDVVINLMPDSSKDAHPDEGK---LVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCLANY 108 (157)
T ss_dssp HHHHHHTTCCEEEECSCTTSTTSCTTHHH---HHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECSBSH
T ss_pred HHHHHHcCCCEEEECCCcccccccccHHH---HHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 5678899999988777643221 011011 1223454 4567799988 77766543 449999999874
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=93.30 E-value=0.17 Score=42.19 Aligned_cols=64 Identities=8% Similarity=0.093 Sum_probs=46.0
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhh-hhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHK-EFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~-~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+.+|.+.|. +|+++.|+.+. ++|++.+. .+. ..++++...++.+.++|.+++.++|+||++.+.
T Consensus 170 a~~L~~~Ga~~V~i~nR~~~~---~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 170 CIQAALDGVKEISIFNRKDDF---YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp HHHHHHTTCSEEEEEECSSTT---HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSST
T ss_pred HHHHHHCCCCEEEEEECCCch---HHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccC
Confidence 568889998 89999998432 23444332 121 135566677888888899999999999999864
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=92.49 E-value=0.31 Score=43.73 Aligned_cols=78 Identities=9% Similarity=0.175 Sum_probs=53.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCC-CeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGI-GVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~-gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll 78 (230)
+++.|.+.|++|+++.++. ++.+ .+... |+.++.||.+|++.|.++ ++.+|.||.+ . +-.....++
T Consensus 142 la~~L~~~~~~vvvid~~~------~~~~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t-~--~D~~n~~~~ 209 (565)
T 4gx0_A 142 LIRKLESRNHLFVVVTDNY------DQAL---HLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN-L--SDPDNANLC 209 (565)
T ss_dssp HHHHTTTTTCCEEEEESCH------HHHH---HHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC-S--CHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCH------HHHH---HHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe-C--CcHHHHHHH
Confidence 3677888999999999863 3332 33445 899999999999999987 6789999863 2 222233344
Q ss_pred HHHHHhCCcceEe
Q 026978 79 HAIKVAGNIKRFL 91 (230)
Q Consensus 79 ~Aa~~ag~Vkr~v 91 (230)
..+++.+ ..+++
T Consensus 210 ~~ar~~~-~~~ii 221 (565)
T 4gx0_A 210 LTVRSLC-QTPII 221 (565)
T ss_dssp HHHHTTC-CCCEE
T ss_pred HHHHHhc-CceEE
Confidence 4566655 44444
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.28 E-value=0.13 Score=43.74 Aligned_cols=59 Identities=15% Similarity=0.243 Sum_probs=41.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++.|...|++|++++|+. ++.+.+.+. .|.. +.+|..+.+++.++++++|+||++++..
T Consensus 182 a~~l~~~Ga~V~~~d~~~------~~~~~~~~~--~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 182 AKIALGMGAQVTILDVNH------KRLQYLDDV--FGGR-VITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp HHHHHHTTCEEEEEESCH------HHHHHHHHH--TTTS-EEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred HHHHHhCCCEEEEEECCH------HHHHHHHHh--cCce-EEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 566778999999999873 333332221 2333 4567788889999999999999999754
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=92.26 E-value=0.41 Score=37.94 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=39.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH----hcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI----LKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a----l~g~D~Vi~~~~~~ 69 (230)
++++|+++|++|+++.|+.+.. . ..|++ ..|+.+.+++.++ +.++|++|++++..
T Consensus 40 iA~~~~~~Ga~V~l~~~~~~l~-----------~-~~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 40 IAAAAARRGANVTLVSGPVSLP-----------T-PPFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHTTCEEEEEECSCCCC-----------C-CTTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHCCCEEEEEECCcccc-----------c-CCCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 4688999999999998875311 1 23554 4588887666554 45799999999865
|
| >2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene} | Back alignment and structure |
|---|
Probab=91.69 E-value=1.4 Score=30.58 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=59.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCChhh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQFLD 73 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~~~~ 73 (230)
|+++...+|..|.++-.+... ..+.+.|..+...|+.+... .|.+++.+-++ .-|+|+.... .+-+.
T Consensus 18 ivreikrqgvrvvllysdqde---krrrerleefekqgvdvrtv--edkedfrenireiwerypqldvvvivtt-ddkew 91 (162)
T 2l82_A 18 IVREIKRQGVRVVLLYSDQDE---KRRRERLEEFEKQGVDVRTV--EDKEDFRENIREIWERYPQLDVVVIVTT-DDKEW 91 (162)
T ss_dssp HHHHHHHTTCEEEEEECCSCH---HHHHHHHHHHHTTTCEEEEC--CSHHHHHHHHHHHHHHCTTCCEEEEEEC-CCHHH
T ss_pred HHHHHHhCCeEEEEEecCchH---HHHHHHHHHHHHcCCceeee--ccHHHHHHHHHHHHHhCCCCcEEEEEec-CcHHH
Confidence 467778899998887654321 12345577788899987654 45565555443 5688776653 35567
Q ss_pred HHHHHHHHHHhCCcceEec
Q 026978 74 QLEIVHAIKVAGNIKRFLP 92 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vkr~v~ 92 (230)
.+.+++.|++.| |.-|+.
T Consensus 92 ikdfieeakerg-vevfvv 109 (162)
T 2l82_A 92 IKDFIEEAKERG-VEVFVV 109 (162)
T ss_dssp HHHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHhcC-cEEEEE
Confidence 889999999999 998873
|
| >3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=91.32 E-value=0.44 Score=39.71 Aligned_cols=112 Identities=13% Similarity=0.181 Sum_probs=64.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh-cCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL-KEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al-~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|+++|++|++.++.... + . ...|+..|+++..|. +++. .. .++|.||...+... ....+++
T Consensus 21 A~~L~~~G~~V~~~D~~~~~---~-~---~~~L~~~gi~v~~g~--~~~~---l~~~~~d~vV~Spgi~~---~~p~~~~ 85 (326)
T 3eag_A 21 AAIAKEAGFEVSGCDAKMYP---P-M---STQLEALGIDVYEGF--DAAQ---LDEFKADVYVIGNVAKR---GMDVVEA 85 (326)
T ss_dssp HHHHHHTTCEEEEEESSCCT---T-H---HHHHHHTTCEEEESC--CGGG---GGSCCCSEEEECTTCCT---TCHHHHH
T ss_pred HHHHHhCCCEEEEEcCCCCc---H-H---HHHHHhCCCEEECCC--CHHH---cCCCCCCEEEECCCcCC---CCHHHHH
Confidence 45677899999999987542 2 1 123556799998773 3332 23 47999998776542 2345778
Q ss_pred HHHhCCcceEecccc-cccC--CC----CCCCCchhHHHHHHHHHHHHHHHcCCCEEEE
Q 026978 81 IKVAGNIKRFLPSEF-GCEE--DK----VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFV 132 (230)
Q Consensus 81 a~~ag~Vkr~v~S~~-g~~~--~~----~~~~~p~~~~~~~K~~~e~~l~~~gl~~til 132 (230)
|++.| ++-+=-.++ +... .. .... .+ =..++..+...|++.|.+.+++
T Consensus 86 a~~~g-i~v~~~~e~~~~~~~~~~~~IaVTGT-nG--KTTTt~ll~~iL~~~g~~~~~~ 140 (326)
T 3eag_A 86 ILNLG-LPYISGPQWLSENVLHHHWVLGVAGT-HG--KTTTASMLAWVLEYAGLAPGFL 140 (326)
T ss_dssp HHHTT-CCEEEHHHHHHHHTGGGSEEEEEESS-SC--HHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHcC-CcEEeHHHHHHHHHhcCCCEEEEECC-CC--HHHHHHHHHHHHHHcCCCceEE
Confidence 88888 663211121 1000 00 0000 01 1245667778888888875443
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=90.94 E-value=1.8 Score=36.54 Aligned_cols=98 Identities=10% Similarity=0.176 Sum_probs=60.4
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++++.+.|++|.++...+.. |.. .+ --+.+..|+.|.+.+.++++ ++|+|+....... ..+++
T Consensus 27 ~~a~~~~G~~v~~~~~~~~~---~~~-----~~---~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~----~~~~~ 91 (391)
T 1kjq_A 27 AIECQRLGVEVIAVDRYADA---PAM-----HV---AHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIA----TDMLI 91 (391)
T ss_dssp HHHHHTTTCEEEEEESSTTC---GGG-----GG---SSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSC----HHHHH
T ss_pred HHHHHHcCCEEEEEECCCCC---chh-----hh---ccceEECCCCCHHHHHHHHHHcCCCEEEECCCcCC----HHHHH
Confidence 56778889999999876432 210 11 12466789999999988886 8999998654322 23566
Q ss_pred HHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHH-HHcCCC
Q 026978 80 AIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAI-EAAQIP 128 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l-~~~gl~ 128 (230)
.+.+.| + .+.++. ........|....+.+ ++.|++
T Consensus 92 ~l~~~g-i-~~~~~~------------~~~~~~~dK~~~~~~l~~~~gip 127 (391)
T 1kjq_A 92 QLEEEG-L-NVVPCA------------RATKLTMNREGIRRLAAEELQLP 127 (391)
T ss_dssp HHHHTT-C-EESSCH------------HHHHHHHSHHHHHHHHHTTSCCC
T ss_pred HHHhCC-C-CcCCCH------------HHHHHhhCHHHHHHHHHHhCCCC
Confidence 677788 6 333321 0112335566666665 455654
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=90.42 E-value=0.36 Score=37.63 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=36.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
++.|.+.|++|++++|+. ++.+ .+...|+++. ++.++++++|+||.++....
T Consensus 44 a~~l~~~g~~V~~~~r~~------~~~~---~~~~~g~~~~--------~~~~~~~~~DvVi~av~~~~ 95 (215)
T 2vns_A 44 ATRLVGSGFKVVVGSRNP------KRTA---RLFPSAAQVT--------FQEEAVSSPEVIFVAVFREH 95 (215)
T ss_dssp HHHHHHTTCCEEEEESSH------HHHH---HHSBTTSEEE--------EHHHHTTSCSEEEECSCGGG
T ss_pred HHHHHHCCCEEEEEeCCH------HHHH---HHHHcCCcee--------cHHHHHhCCCEEEECCChHH
Confidence 567888999999999963 2333 3334466542 35667889999999988643
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=90.22 E-value=2.3 Score=35.95 Aligned_cols=70 Identities=17% Similarity=0.104 Sum_probs=46.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+++++.+.|++|.+++.+..... . ..--..+..|+.|.+.+.+.++.+|+|....... ...+++.
T Consensus 29 la~aa~~~G~~vi~~d~~~~~~~----------~-~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~e~~----~~~~~~~ 93 (389)
T 3q2o_A 29 MALAAKEMGYKIAVLDPTKNSPC----------A-QVADIEIVASYDDLKAIQHLAEISDVVTYEFENI----DYRCLQW 93 (389)
T ss_dssp HHHHHHHTTCEEEEEESSTTCTT----------T-TTCSEEEECCTTCHHHHHHHHHTCSEEEESCCCC----CHHHHHH
T ss_pred HHHHHHHcCCEEEEEeCCCCCch----------H-HhCCceEecCcCCHHHHHHHHHhCCEeeeccccc----cHHHHHH
Confidence 36778889999999987654311 0 1112456789999999999999999985433222 2345566
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
+.+.|
T Consensus 94 l~~~g 98 (389)
T 3q2o_A 94 LEKHA 98 (389)
T ss_dssp HHHHS
T ss_pred HHhhC
Confidence 66666
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=90.10 E-value=1.1 Score=38.50 Aligned_cols=98 Identities=13% Similarity=0.237 Sum_probs=61.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
++++.+.|++|.++...+.. |.. .+ --+.+..|+.|.+.+.++++ ++|+|+....... ..+++
T Consensus 35 ~~a~~~~G~~v~~v~~~~~~---~~~-----~~---ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e~~~----~~~~~ 99 (433)
T 2dwc_A 35 AIEAQRLGVEVVAVDRYANA---PAM-----QV---AHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAIN----LDALF 99 (433)
T ss_dssp HHHHHHTTCEEEEEESSTTC---HHH-----HH---SSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCSC----HHHHH
T ss_pred HHHHHHCCCEEEEEECCCCC---hhh-----hh---cceEEECCCCCHHHHHHHHHHcCCCEEEECcccCC----HHHHH
Confidence 56788899999999876432 210 11 12466789999999998886 8999998765332 24556
Q ss_pred HHHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHH-HHcCCC
Q 026978 80 AIKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAI-EAAQIP 128 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l-~~~gl~ 128 (230)
.+.+.| + .+.++. ........|....+.+ ++.|++
T Consensus 100 ~l~~~g-i-~~~~~~------------~~~~~~~dK~~~k~~l~~~~gip 135 (433)
T 2dwc_A 100 EFEKDG-Y-FVVPNA------------RATWIAMHRERLRETLVKEAKVP 135 (433)
T ss_dssp HHHHTT-C-CBSSCH------------HHHHHHHCHHHHHHHHHHTSCCC
T ss_pred HHHhcC-C-eeCCCH------------HHHHHhhCHHHHHHHHHHhcCCC
Confidence 677778 6 332211 0112345666666666 566654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=89.91 E-value=0.75 Score=36.77 Aligned_cols=85 Identities=12% Similarity=0.138 Sum_probs=53.0
Q ss_pred HHHHhhCCC-eEEEEEcCCCCC------------C-CcchHhhhh-hhc--CCCeE--EEEecCCCHHHHHHHhcCCCEE
Q 026978 2 VKASVSSGH-KTFVYARPVTQN------------S-RPSKLEIHK-EFQ--GIGVT--IIEGELDEHKKIVSILKEVDVV 62 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~------------~-~p~k~~~l~-~l~--~~gv~--vv~gD~~d~~~L~~al~g~D~V 62 (230)
++.|...|. ++++++++.-.. + ...|++.+. .+. .++++ .+..+++ .+.+.+.++++|+|
T Consensus 47 a~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvV 125 (249)
T 1jw9_B 47 SQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLV 125 (249)
T ss_dssp HHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEE
T ss_pred HHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEE
Confidence 567888896 889888875110 0 002443322 121 23444 4455565 45677889999999
Q ss_pred EEcCCCCChhhHHHHHHHHHHhCCcceE
Q 026978 63 ISTVAYPQFLDQLEIVHAIKVAGNIKRF 90 (230)
Q Consensus 63 i~~~~~~~~~~~~~ll~Aa~~ag~Vkr~ 90 (230)
|.+.. +......+.++|++.| +..+
T Consensus 126 i~~~d--~~~~~~~l~~~~~~~~-~p~i 150 (249)
T 1jw9_B 126 LDCTD--NVAVRNQLNAGCFAAK-VPLV 150 (249)
T ss_dssp EECCS--SHHHHHHHHHHHHHHT-CCEE
T ss_pred EEeCC--CHHHHHHHHHHHHHcC-CCEE
Confidence 99975 3455667788899988 6543
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=89.61 E-value=0.57 Score=39.00 Aligned_cols=69 Identities=12% Similarity=0.055 Sum_probs=43.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchH-hh---hhhh-----cCCCeEEEEecCCCHHHHHHHh---------------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKL-EI---HKEF-----QGIGVTIIEGELDEHKKIVSIL--------------- 56 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~-~~---l~~l-----~~~gv~vv~gD~~d~~~L~~al--------------- 56 (230)
|+++++++|++|+.+.|+.+-.. +.+. .. +..+ ...|+..+.+|....+.+.+++
T Consensus 71 iAe~~~~~Ga~V~lv~g~~sl~p-~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i 149 (313)
T 1p9o_A 71 SAEAFLAAGYGVLFLYRARSAFP-YAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVV 149 (313)
T ss_dssp HHHHHHHTTCEEEEEEETTSCCT-TGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHCCCEEEEEecCCCcCc-chhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhccccceee
Confidence 47889999999999999865321 1100 00 0000 1146667787777655555554
Q ss_pred ----------------------cCCCEEEEcCCCCC
Q 026978 57 ----------------------KEVDVVISTVAYPQ 70 (230)
Q Consensus 57 ----------------------~g~D~Vi~~~~~~~ 70 (230)
..+|++|++++..+
T Consensus 150 ~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD 185 (313)
T 1p9o_A 150 EFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD 185 (313)
T ss_dssp EECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred ccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence 46899999998765
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=89.29 E-value=1.3 Score=37.95 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=46.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++++.+.|++|++++ +... |.. .+ ......+.+|+.|.+.|.+.++.+|+|+--.-... ..+++.+
T Consensus 40 ~~aa~~lG~~v~~~d-~~~~---p~~-----~~-ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e~e~~~----~~~l~~l 105 (403)
T 3k5i_A 40 VESANRLNIQVNVLD-ADNS---PAK-----QI-SAHDGHVTGSFKEREAVRQLAKTCDVVTAEIEHVD----TYALEEV 105 (403)
T ss_dssp HHHHHHHTCEEEEEE-STTC---TTG-----GG-CCSSCCEESCTTCHHHHHHHHTTCSEEEESSSCSC----HHHHHHH
T ss_pred HHHHHHCCCEEEEEE-CCCC---cHH-----Hh-ccccceeecCCCCHHHHHHHHHhCCEEEECCCCCC----HHHHHHH
Confidence 567778899999999 5432 211 12 12224678899999999999999998875322222 2334555
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
.+ | ++
T Consensus 106 ~~-g-~~ 110 (403)
T 3k5i_A 106 AS-E-VK 110 (403)
T ss_dssp TT-T-SE
T ss_pred Hc-C-Cc
Confidence 55 7 65
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=88.91 E-value=0.97 Score=36.16 Aligned_cols=81 Identities=7% Similarity=0.045 Sum_probs=47.5
Q ss_pred HHHHhhC-CCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh----c-CCCEEEEcCCCCChhhHH
Q 026978 2 VKASVSS-GHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL----K-EVDVVISTVAYPQFLDQL 75 (230)
Q Consensus 2 v~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al----~-g~D~Vi~~~~~~~~~~~~ 75 (230)
++.+.+. +++|.++.+.... .+ .+...++. +..|+++++.+.+.+ + |+++|+.+.+. ..+...
T Consensus 17 ~~~~~~~~~~elva~~d~~~d---l~------~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~-~~e~~~ 85 (245)
T 1p9l_A 17 VRAVAAADDLTLSAELDAGDP---LS------LLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF-TAERFQ 85 (245)
T ss_dssp HHHHHHCTTCEEEEEECTTCC---TH------HHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC-CHHHHH
T ss_pred HHHHHhCCCCEEEEEEccCCC---HH------HHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC-CHHHHH
Confidence 4555554 8999877654321 11 11112444 566888877665433 2 88999988864 334344
Q ss_pred HHHHHHHHh-CCcceEeccc
Q 026978 76 EIVHAIKVA-GNIKRFLPSE 94 (230)
Q Consensus 76 ~ll~Aa~~a-g~Vkr~v~S~ 94 (230)
.|.++|+++ + +..++.+.
T Consensus 86 ~l~~aa~~~~~-~~vv~a~N 104 (245)
T 1p9l_A 86 QVESWLVAKPN-TSVLIAPN 104 (245)
T ss_dssp HHHHHHHTSTT-CEEEECSC
T ss_pred HHHHHHHhCCC-CCEEEECC
Confidence 556666666 6 77666543
|
| >2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=88.73 E-value=1.7 Score=37.48 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=46.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEE------ecCCCHHHHHHHh--cCCCEEEEcCCCCChh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE------GELDEHKKIVSIL--KEVDVVISTVAYPQFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~------gD~~d~~~L~~al--~g~D~Vi~~~~~~~~~ 72 (230)
+++++.+.|++|+++..+..... +. ..+ ..-.++. .|+.|.+.+.+++ .++|+|+...+...-.
T Consensus 16 i~~a~~~~G~~vv~v~~~~~~~~-~~-----~~~--ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~ 87 (451)
T 2vpq_A 16 IIRACRDLGIQTVAIYSEGDKDA-LH-----TQI--ADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAEN 87 (451)
T ss_dssp HHHHHHHTTCEEEEEEEGGGTTC-HH-----HHH--SSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTC
T ss_pred HHHHHHHcCCEEEEEeccccccc-ch-----hhh--CCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEECCCccccC
Confidence 36788889999999976433211 10 011 1122222 4888989898888 5899998765422111
Q ss_pred hHHHHHHHHHHhCCcc
Q 026978 73 DQLEIVHAIKVAGNIK 88 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vk 88 (230)
..+.+.+.+.| ++
T Consensus 88 --~~~~~~~~~~g-i~ 100 (451)
T 2vpq_A 88 --ADFAELCEACQ-LK 100 (451)
T ss_dssp --HHHHHHHHTTT-CE
T ss_pred --HHHHHHHHHcC-Ce
Confidence 13566777778 65
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=88.58 E-value=1.9 Score=37.29 Aligned_cols=77 Identities=13% Similarity=0.173 Sum_probs=46.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEe------cCCCHHHHHHHhc--CCCEEEEcCCCCChh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEG------ELDEHKKIVSILK--EVDVVISTVAYPQFL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~g------D~~d~~~L~~al~--g~D~Vi~~~~~~~~~ 72 (230)
+++++.+.|++|+++..+..... +. ..+ ..-.+..+ ++.|.+.+.++++ ++|+|+-..+....
T Consensus 21 i~~aa~~~G~~~v~v~~~~~~~~-~~-----~~~--ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~g~~~e- 91 (446)
T 3ouz_A 21 ALRTIKEMGKKAICVYSEADKDA-LY-----LKY--ADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGYGFLSE- 91 (446)
T ss_dssp HHHHHHHTTCEEEEEEEGGGTTC-TH-----HHH--SSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCSSTTTT-
T ss_pred HHHHHHHcCCEEEEEEcCccccc-ch-----Hhh--CCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECCccccc-
Confidence 36788889999999975433221 20 011 12223333 7788888888876 89998865443221
Q ss_pred hHHHHHHHHHHhCCcc
Q 026978 73 DQLEIVHAIKVAGNIK 88 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vk 88 (230)
...+.+++.+.| ++
T Consensus 92 -~~~~~~~~~~~g-~~ 105 (446)
T 3ouz_A 92 -NQNFVEICAKHN-IK 105 (446)
T ss_dssp -CHHHHHHHHHTT-CE
T ss_pred -CHHHHHHHHHCC-Cc
Confidence 134567777888 65
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=88.53 E-value=0.85 Score=40.17 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=35.9
Q ss_pred CeEEEEecCC--CH-HHHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEe
Q 026978 38 GVTIIEGELD--EH-KKIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 38 gv~vv~gD~~--d~-~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
|++++..+++ |. +.+.+++++.|+||+++... ....++++|.++| |. ++
T Consensus 60 g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~~~---~~l~Im~acleaG-v~-Yl 111 (480)
T 2ph5_A 60 GVSFKLQQITPQNYLEVIGSTLEENDFLIDVSIGI---SSLALIILCNQKG-AL-YI 111 (480)
T ss_dssp TCEEEECCCCTTTHHHHTGGGCCTTCEEEECCSSS---CHHHHHHHHHHHT-CE-EE
T ss_pred CCceeEEeccchhHHHHHHHHhcCCCEEEECCccc---cCHHHHHHHHHcC-CC-EE
Confidence 6677777664 44 44667888789999976443 4678999999999 55 55
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=88.34 E-value=0.51 Score=39.14 Aligned_cols=51 Identities=18% Similarity=0.324 Sum_probs=35.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+. ++.+. +...|++.. .++.++++++|+||.+++.
T Consensus 47 a~~l~~~G~~V~~~dr~~------~~~~~---l~~~g~~~~-------~~~~e~~~~aDvVi~~vp~ 97 (320)
T 4dll_A 47 ARRLCEAGYALQVWNRTP------ARAAS---LAALGATIH-------EQARAAARDADIVVSMLEN 97 (320)
T ss_dssp HHHHHHTTCEEEEECSCH------HHHHH---HHTTTCEEE-------SSHHHHHTTCSEEEECCSS
T ss_pred HHHHHhCCCeEEEEcCCH------HHHHH---HHHCCCEee-------CCHHHHHhcCCEEEEECCC
Confidence 567889999999999873 34333 334465442 2456678889999988864
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=88.05 E-value=0.17 Score=36.64 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=35.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
++.|.+.|++|+++.|+. ++++.+.. ..++++. .+. ++.++++++|+||.+++...
T Consensus 37 a~~l~~~g~~v~v~~r~~------~~~~~~a~--~~~~~~~--~~~---~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 37 APYFSYPQYKVTVAGRNI------DHVRAFAE--KYEYEYV--LIN---DIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp GGGCCTTTCEEEEEESCH------HHHHHHHH--HHTCEEE--ECS---CHHHHHHTCSEEEECSCCSS
T ss_pred HHHHHhCCCEEEEEcCCH------HHHHHHHH--HhCCceE--eec---CHHHHhcCCCEEEEeCCCCC
Confidence 456667898999999873 34333221 1233332 233 35667889999999998653
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=87.91 E-value=0.67 Score=38.52 Aligned_cols=64 Identities=9% Similarity=0.113 Sum_probs=43.5
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhh-hc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHKE-FQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~-l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+.+|.+.|. +|+++.|+.+. ++|++.+.. +. ..+.++...++.+.+.+.+.+.++|+||++.+.
T Consensus 164 a~~L~~~G~~~v~v~nRt~~~---~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 164 GAQAAIEGIKEIKLFNRKDDF---FEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKV 230 (312)
T ss_dssp HHHHHHTTCSEEEEEECSSTH---HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSST
T ss_pred HHHHHHcCCCEEEEEECCCch---HHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcC
Confidence 568889997 89999998432 234443321 21 134556666787765667788899999999875
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=87.69 E-value=2 Score=37.87 Aligned_cols=61 Identities=21% Similarity=0.253 Sum_probs=37.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++..|++.||+|++.+|+. ++.+.+......+..+.. ..+.+++.+.++++|+||.++...
T Consensus 19 lA~~L~~~G~~V~v~dr~~------~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 19 LILNMNDHGFVVCAFNRTV------SKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp HHHHHHHTTCCEEEECSST------HHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEEECSCSS
T ss_pred HHHHHHHCCCEEEEEeCCH------HHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEEEecCCh
Confidence 3577889999999999974 343333221112222211 245566666667788888887663
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=87.46 E-value=0.34 Score=40.02 Aligned_cols=51 Identities=16% Similarity=0.285 Sum_probs=34.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+.. +.+. +...|++. ..++.++++++|+||.+++.
T Consensus 37 A~~l~~~G~~V~~~dr~~~------~~~~---l~~~g~~~-------~~~~~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 37 SMNLLKNGFKVTVWNRTLS------KCDE---LVEHGASV-------CESPAEVIKKCKYTIAMLSD 87 (310)
T ss_dssp HHHHHHTTCEEEEECSSGG------GGHH---HHHTTCEE-------CSSHHHHHHHCSEEEECCSS
T ss_pred HHHHHHCCCeEEEEeCCHH------HHHH---HHHCCCeE-------cCCHHHHHHhCCEEEEEcCC
Confidence 5678899999999999743 3333 22345543 12345666778988888764
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=87.43 E-value=0.35 Score=39.34 Aligned_cols=51 Identities=18% Similarity=0.259 Sum_probs=34.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+.. +.+. +...|++.. .++.++++++|+||.+++.
T Consensus 17 a~~l~~~G~~V~~~dr~~~------~~~~---~~~~g~~~~-------~~~~~~~~~aDvvi~~vp~ 67 (287)
T 3pef_A 17 AKNLVKAGCSVTIWNRSPE------KAEE---LAALGAERA-------ATPCEVVESCPVTFAMLAD 67 (287)
T ss_dssp HHHHHHTTCEEEEECSSGG------GGHH---HHHTTCEEC-------SSHHHHHHHCSEEEECCSS
T ss_pred HHHHHHCCCeEEEEcCCHH------HHHH---HHHCCCeec-------CCHHHHHhcCCEEEEEcCC
Confidence 5678899999999999743 3332 223455431 2455667788999988864
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=87.43 E-value=0.087 Score=40.73 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=34.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|++.|++|++++|+.. +.+.+..- .+..+..+|+. .+++.++++++|+||+++..
T Consensus 16 ia~~l~~~g~~V~~~~r~~~------~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 16 LALRLATLGHEIVVGSRREE------KAEAKAAE--YRRIAGDASIT-GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp HHHHHHTTTCEEEEEESSHH------HHHHHHHH--HHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred HHHHHHHCCCEEEEEeCCHH------HHHHHHHH--hccccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence 35778899999999999732 33222110 01000001221 23466778899999999875
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=87.30 E-value=0.56 Score=38.57 Aligned_cols=58 Identities=17% Similarity=0.039 Sum_probs=37.3
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+.+|++.|. +|+++.|+. +|++.+... -+... ++..+.+++.+++.++|+||++++..
T Consensus 157 a~~L~~~G~~~V~v~nR~~------~ka~~la~~--~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 157 YFSLLSTAAERIDMANRTV------EKAERLVRE--GDERR--SAYFSLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp HHHHHTTTCSEEEEECSSH------HHHHHHHHH--SCSSS--CCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred HHHHHHCCCCEEEEEeCCH------HHHHHHHHH--hhhcc--CceeeHHHHHhhhccCCEEEECCCCC
Confidence 567888997 999999973 354443321 11100 01223456888899999999998754
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=87.14 E-value=0.95 Score=35.72 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=45.8
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|++.|.+|+++++... + . ++.+ ...+++++..++.+. -++++|.||.+.+.. .....+.++
T Consensus 47 a~~Ll~~GA~VtVvap~~~----~-~---l~~l~~~~~i~~i~~~~~~~-----dL~~adLVIaAT~d~--~~N~~I~~~ 111 (223)
T 3dfz_A 47 IKGFLQEGAAITVVAPTVS----A-E---INEWEAKGQLRVKRKKVGEE-----DLLNVFFIVVATNDQ--AVNKFVKQH 111 (223)
T ss_dssp HHHHGGGCCCEEEECSSCC----H-H---HHHHHHTTSCEEECSCCCGG-----GSSSCSEEEECCCCT--HHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCC----H-H---HHHHHHcCCcEEEECCCCHh-----HhCCCCEEEECCCCH--HHHHHHHHH
Confidence 5678999999999987533 2 1 2233 234689998888643 368999999876654 334455566
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
|+ .|
T Consensus 112 ak-~g 115 (223)
T 3dfz_A 112 IK-ND 115 (223)
T ss_dssp SC-TT
T ss_pred Hh-CC
Confidence 66 66
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=87.07 E-value=1 Score=37.88 Aligned_cols=34 Identities=15% Similarity=0.019 Sum_probs=26.6
Q ss_pred hcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEecc
Q 026978 56 LKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPS 93 (230)
Q Consensus 56 l~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v~S 93 (230)
++++|+||.|++. .....++.++.++| ++.+..|
T Consensus 66 ~~~~DvV~~a~g~---~~s~~~a~~~~~aG-~kvId~S 99 (340)
T 2hjs_A 66 FSSVGLAFFAAAA---EVSRAHAERARAAG-CSVIDLS 99 (340)
T ss_dssp GGGCSEEEECSCH---HHHHHHHHHHHHTT-CEEEETT
T ss_pred hcCCCEEEEcCCc---HHHHHHHHHHHHCC-CEEEEeC
Confidence 5799999999864 34678888899999 8765544
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=86.86 E-value=0.53 Score=39.03 Aligned_cols=35 Identities=26% Similarity=0.177 Sum_probs=29.0
Q ss_pred HHHHHhcCCCEEEEcCCCC-------------ChhhHHHHHHHHHHhC
Q 026978 51 KIVSILKEVDVVISTVAYP-------------QFLDQLEIVHAIKVAG 85 (230)
Q Consensus 51 ~L~~al~g~D~Vi~~~~~~-------------~~~~~~~ll~Aa~~ag 85 (230)
++.++++|+|+|||+++.. ++...+++++++++.+
T Consensus 67 ~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~ 114 (313)
T 1hye_A 67 ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC 114 (313)
T ss_dssp TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3678899999999999854 2456789999999987
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=86.75 E-value=0.38 Score=39.38 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=34.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+.... + .+...|++. ..++.++++ +|+||.+++.
T Consensus 31 A~~l~~~G~~V~~~dr~~~~~------~---~~~~~g~~~-------~~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 31 ATRMTEWPGGVTVYDIRIEAM------T---PLAEAGATL-------ADSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp HHHHTTSTTCEEEECSSTTTS------H---HHHHTTCEE-------CSSHHHHTT-SSEEEECCSS
T ss_pred HHHHHHCCCeEEEEeCCHHHH------H---HHHHCCCEE-------cCCHHHHHh-CCEEEEECCC
Confidence 567888999999999986432 2 222345543 124556677 9999998875
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=86.23 E-value=6.5 Score=32.68 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=58.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEec-CCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGE-LDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD-~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+.++.+.|++|++++.++.... . .+ --+++..| ..|.+.+....+++|+|+-..+. .. ...+...
T Consensus 17 ~~~Ak~~G~~vv~vd~~~~~~~---~-----~~---aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~--~~-~~~~~~~ 82 (363)
T 4ffl_A 17 AYLSKKAGMKVVLVDKNPQALI---R-----NY---ADEFYCFDVIKEPEKLLELSKRVDAVLPVNEN--LA-CIEFLNS 82 (363)
T ss_dssp HHHHHHTTCEEEEEESCTTCTT---T-----TT---SSEEEECCTTTCHHHHHHHHTSSSEEEECCCC--HH-HHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCCCChh---H-----hh---CCEEEECCCCcCHHHHHHHhcCCCEEEECCCC--hh-HHHHHHH
Confidence 4566778999999987754321 0 11 11344555 45788888888999999865542 21 2233333
Q ss_pred HHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 026978 81 IKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP 128 (230)
Q Consensus 81 a~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~ 128 (230)
+.+.+ ...+.++ . ........|....+.+++.|+|
T Consensus 83 ~~~~~-~~~~g~~-----~-------~a~~~~~dK~~~k~~l~~~gip 117 (363)
T 4ffl_A 83 IKEKF-SCPVLFD-----F-------EAYRISRDKKKSKDYFKSIGVP 117 (363)
T ss_dssp HGGGC-SSCBCCC-----H-------HHHHHHTSHHHHHHHHHHTTCC
T ss_pred HHHHC-CCccCCC-----H-------HHHHHhhCHHHHHHHHHhcCCC
Confidence 33333 2212111 0 0123456788889999987776
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=86.21 E-value=0.27 Score=40.12 Aligned_cols=58 Identities=12% Similarity=0.032 Sum_probs=36.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEE--------ecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE--------GELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~--------gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|.+.||+|++++|+. ++.+. +...|+.+.. .+..+.+++.++++++|+||.++..
T Consensus 19 a~~l~~~g~~V~~~~r~~------~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~ 84 (316)
T 2ew2_A 19 GIMLHQGGNDVTLIDQWP------AHIEA---IRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTKA 84 (316)
T ss_dssp HHHHHHTTCEEEEECSCH------HHHHH---HHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSCH
T ss_pred HHHHHhCCCcEEEEECCH------HHHHH---HHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEecc
Confidence 567888999999999963 23332 2223554432 1122334444556699999999875
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=86.20 E-value=6.7 Score=33.01 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=59.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+++++.+.|++|.+++++... |.. .+ --+.+.+|+.|.+.|.+.++.+|+|..-. .++.. ..++.
T Consensus 27 la~aa~~lG~~viv~d~~~~~---p~~-----~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~~~--E~~~~--~~l~~ 91 (377)
T 3orq_A 27 MAQSAQKMGYKVVVLDPSEDC---PCR-----YV---AHEFIQAKYDDEKALNQLGQKCDVITYEF--ENISA--QQLKL 91 (377)
T ss_dssp HHHHHHHTTCEEEEEESCTTC---TTG-----GG---SSEEEECCTTCHHHHHHHHHHCSEEEESS--TTSCH--HHHHH
T ss_pred HHHHHHHCCCEEEEEECCCCC---hhh-----hh---CCEEEECCCCCHHHHHHHHHhCCcceecc--cccCH--HHHHH
Confidence 357788899999999876543 211 11 22577899999999999999999885432 22211 22333
Q ss_pred HHHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 026978 81 IKVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP 128 (230)
Q Consensus 81 a~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~ 128 (230)
+.+.+ .+ +... ........|....+.+++.|++
T Consensus 92 l~~~~----~v----~p~~-------~~~~~~~dK~~~k~~l~~~Gip 124 (377)
T 3orq_A 92 LCEKY----NI----PQGY-------QAIQLLQDRLTEKETLKSAGTK 124 (377)
T ss_dssp HHHHS----CC----TTTT-------HHHHHHHSHHHHHHHHHHTTCC
T ss_pred Hhhhc----CC----CCCH-------HHHHHhcCHHHHHHHHHHCCCC
Confidence 33333 11 1100 1123456777788888877765
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=86.07 E-value=0.45 Score=40.25 Aligned_cols=59 Identities=22% Similarity=0.352 Sum_probs=38.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+..|...|.+|++++|+. +|++.+.++-...+.. ...+.+++.+.++++|+||++++..
T Consensus 183 a~~a~~~Ga~V~v~dr~~------~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 183 AKMAVGLGAQVQIFDINV------ERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp HHHHHHTTCEEEEEESCH------HHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECCCCT
T ss_pred HHHHHhCCCEEEEEeCCH------HHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEECCCcC
Confidence 456777899999999973 3444443321112222 2235667888889999999998753
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=85.63 E-value=0.91 Score=38.81 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=39.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecC------------------CCHHHHHHHhcCCCEEE
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGEL------------------DEHKKIVSILKEVDVVI 63 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~------------------~d~~~L~~al~g~D~Vi 63 (230)
++.|...|.+|++++|+.. +.+.+. ..|++++..++ .+.+.+.++++++|+||
T Consensus 200 a~~a~~lGa~V~v~D~~~~------~l~~~~---~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI 270 (381)
T 3p2y_A 200 LATAKRLGAKTTGYDVRPE------VAEQVR---SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVI 270 (381)
T ss_dssp HHHHHHHTCEEEEECSSGG------GHHHHH---HTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHCCCEEEEEeCCHH------HHHHHH---HcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEE
Confidence 4556677999999999743 333332 34777654331 12467889999999999
Q ss_pred EcCCC
Q 026978 64 STVAY 68 (230)
Q Consensus 64 ~~~~~ 68 (230)
.++..
T Consensus 271 ~tv~i 275 (381)
T 3p2y_A 271 TTALV 275 (381)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 98643
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=85.34 E-value=1.2 Score=38.37 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=38.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEE
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVIS 64 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~ 64 (230)
++++.+.|++|.+++.+... |.. .+ .-+.+.+|+.|.+.|.++++++|+|+.
T Consensus 51 ~~aa~~lG~~v~v~d~~~~~---p~~-----~~---ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 51 CFAAQSMGYRVAVLDPDPAS---PAG-----AV---ADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp HHHHHHTTCEEEEECSCTTC---HHH-----HH---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHCCCEEEEECCCCcC---chh-----hh---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 56777889999999765432 210 12 124667899999999999999999984
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=85.29 E-value=0.3 Score=39.73 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=34.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+.. +.+.+ ...|+++. .++.++++++|+||.++..
T Consensus 17 a~~l~~~G~~V~~~dr~~~------~~~~~---~~~g~~~~-------~~~~~~~~~advvi~~v~~ 67 (287)
T 3pdu_A 17 AANLVRAGFDVTVWNRNPA------KCAPL---VALGARQA-------SSPAEVCAACDITIAMLAD 67 (287)
T ss_dssp HHHHHHHTCCEEEECSSGG------GGHHH---HHHTCEEC-------SCHHHHHHHCSEEEECCSS
T ss_pred HHHHHHCCCeEEEEcCCHH------HHHHH---HHCCCeec-------CCHHHHHHcCCEEEEEcCC
Confidence 5678889999999999743 33332 22354431 2345667788999988875
|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=85.24 E-value=4.8 Score=33.59 Aligned_cols=68 Identities=9% Similarity=0.014 Sum_probs=44.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++++.+.|++|.+++.+... |. ..+ . -+ +..|+.|.+.+.+.+.++|+|+....... ..+++.+
T Consensus 15 ~~a~~~~G~~v~~~~~~~~~---~~-----~~~--a-~~-~~~~~~d~~~l~~~~~~~d~v~~~~e~~~----~~~~~~l 78 (369)
T 3aw8_A 15 ALAGYPLGLSFRFLDPSPEA---CA-----GQV--G-EL-VVGEFLDEGALLRFAEGLALVTYEFENVP----VEAARRL 78 (369)
T ss_dssp HHHHTTBTCCEEEEESCTTC---GG-----GGT--S-EE-EECCTTCHHHHHHHHTTCSEEEECCTTCC----HHHHHHH
T ss_pred HHHHHHcCCEEEEEeCCCCC---hH-----HHh--h-ce-EecCCCCHHHHHHHHhCCCEEEECCCCcC----HHHHHHH
Confidence 56777889999999865322 21 011 1 12 57899999999999899999986654432 2344455
Q ss_pred HHhC
Q 026978 82 KVAG 85 (230)
Q Consensus 82 ~~ag 85 (230)
.+.|
T Consensus 79 ~~~g 82 (369)
T 3aw8_A 79 EGRL 82 (369)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 5555
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=85.19 E-value=1.3 Score=38.51 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=48.6
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC-CCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE-VDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g-~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|+++|++|++.++...... + ..+.|+..|+++..|.-.+ ..+.+ +|.||...+... ....+.+
T Consensus 25 A~~l~~~G~~V~~~D~~~~~~~-~----~~~~L~~~gi~~~~g~~~~-----~~~~~~~d~vv~spgi~~---~~p~~~~ 91 (451)
T 3lk7_A 25 ARLLAKLGAIVTVNDGKPFDEN-P----TAQSLLEEGIKVVCGSHPL-----ELLDEDFCYMIKNPGIPY---NNPMVKK 91 (451)
T ss_dssp HHHHHHTTCEEEEEESSCGGGC-H----HHHHHHHTTCEEEESCCCG-----GGGGSCEEEEEECTTSCT---TSHHHHH
T ss_pred HHHHHhCCCEEEEEeCCcccCC-h----HHHHHHhCCCEEEECCChH-----HhhcCCCCEEEECCcCCC---CChhHHH
Confidence 5678899999999998642111 1 2234556799998876522 23456 899998876543 2345778
Q ss_pred HHHhCCcc
Q 026978 81 IKVAGNIK 88 (230)
Q Consensus 81 a~~ag~Vk 88 (230)
|++.| ++
T Consensus 92 a~~~g-i~ 98 (451)
T 3lk7_A 92 ALEKQ-IP 98 (451)
T ss_dssp HHHTT-CC
T ss_pred HHHCC-Cc
Confidence 88888 66
|
| >3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4} | Back alignment and structure |
|---|
Probab=85.08 E-value=2.1 Score=38.08 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=64.0
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++-|+++|++|++.++.... + . ...|+..|+++..|. +++. ...++|.||..-+... .-..+++|
T Consensus 36 A~~l~~~G~~V~~sD~~~~~---~-~---~~~L~~~gi~~~~G~--~~~~---~~~~~d~vV~Spgi~~---~~p~l~~a 100 (524)
T 3hn7_A 36 ALLARALGHTVTGSDANIYP---P-M---STQLEQAGVTIEEGY--LIAH---LQPAPDLVVVGNAMKR---GMDVIEYM 100 (524)
T ss_dssp HHHHHHTTCEEEEEESCCCT---T-H---HHHHHHTTCEEEESC--CGGG---GCSCCSEEEECTTCCT---TSHHHHHH
T ss_pred HHHHHhCCCEEEEECCCCCc---H-H---HHHHHHCCCEEECCC--CHHH---cCCCCCEEEECCCcCC---CCHHHHHH
Confidence 45677899999999986542 2 1 224556799998883 3332 2357999998766542 23456788
Q ss_pred HHhCCcceEecccc-cc---cCCC---CCCCCchhHHHHHHHHHHHHHHHcCCCEEEE
Q 026978 82 KVAGNIKRFLPSEF-GC---EEDK---VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFV 132 (230)
Q Consensus 82 ~~ag~Vkr~v~S~~-g~---~~~~---~~~~~p~~~~~~~K~~~e~~l~~~gl~~til 132 (230)
++.| ++-+=-.++ +. .... .... -+ =..++..+...|++.|++.+++
T Consensus 101 ~~~g-i~v~~~~e~l~~~~~~~~~vIaVTGT-nG--KTTTt~li~~iL~~~G~~~~~~ 154 (524)
T 3hn7_A 101 LDTG-LRYTSGPQFLSEQVLQSRHVIAVAGT-HG--KTTTTTMLAWILHYAGIDAGFL 154 (524)
T ss_dssp HHHT-CCEEEHHHHHHHHTGGGSEEEEEECS-SC--HHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHCC-CcEEEHHHHHHHHHhccCcEEEEECC-CC--HHHHHHHHHHHHHHcCCCceEE
Confidence 8888 763321221 10 0000 0000 01 1245666777888888775543
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=84.79 E-value=0.35 Score=39.84 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=35.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++.|++.||+|++++|+. ++.+.+. ..|+.. ..++.++++++|+||.+++..
T Consensus 24 ~A~~l~~~G~~V~~~dr~~------~~~~~~~---~~g~~~-------~~~~~e~~~~aDvVi~~vp~~ 76 (306)
T 3l6d_A 24 MAQVLLKQGKRVAIWNRSP------GKAAALV---AAGAHL-------CESVKAALSASPATIFVLLDN 76 (306)
T ss_dssp HHHHHHHTTCCEEEECSSH------HHHHHHH---HHTCEE-------CSSHHHHHHHSSEEEECCSSH
T ss_pred HHHHHHHCCCEEEEEeCCH------HHHHHHH---HCCCee-------cCCHHHHHhcCCEEEEEeCCH
Confidence 3577899999999999873 3433332 235433 124556677899999988753
|
| >3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A | Back alignment and structure |
|---|
Probab=84.68 E-value=1.8 Score=34.49 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=37.9
Q ss_pred HHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEecccccccCCC
Q 026978 52 IVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDK 101 (230)
Q Consensus 52 L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v~S~~g~~~~~ 101 (230)
+.+++...+..+--+|..+++-...+++.|.++| |+++||-.|+.-.+.
T Consensus 202 vAkAca~~g~~lEPTGGIdl~Nf~~I~~i~l~aG-v~~viPHIYsSIIDk 250 (275)
T 3m6y_A 202 VAKACAEEGFALEPTGGIDKENFETIVRIALEAN-VEQVIPHVYSSIIDK 250 (275)
T ss_dssp HHHHHHHHTCEEEEBSSCCTTTHHHHHHHHHHTT-CSCBCCEECGGGBCT
T ss_pred HHHHHHHcCceECCCCCccHhHHHHHHHHHHHcC-CCeecccccceeccC
Confidence 3444444456888888888888899999999999 999999888765443
|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
Probab=84.56 E-value=3.1 Score=35.88 Aligned_cols=76 Identities=9% Similarity=0.053 Sum_probs=45.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEe-------cCCCHHHHHHHhc--CCCEEEEcCCCCCh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEG-------ELDEHKKIVSILK--EVDVVISTVAYPQF 71 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~g-------D~~d~~~L~~al~--g~D~Vi~~~~~~~~ 71 (230)
+++++.+.|++|+++..+..... +. ..+ .. +.+.. |+.|.+.|.++++ ++|+|+...+...-
T Consensus 17 ~~~a~~~~G~~vv~v~~~~~~~~-~~-----~~~--ad-~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e 87 (449)
T 2w70_A 17 ILRACKELGIKTVAVHSSADRDL-KH-----VLL--AD-ETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSE 87 (449)
T ss_dssp HHHHHHHHTCEEEEEEEGGGTTC-HH-----HHH--SS-EEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEECCSSTTTT
T ss_pred HHHHHHHcCCeEEEEeccccccC-ch-----hhh--CC-EEEEcCCCCccccccCHHHHHHHHHHcCCCEEEECCCCccc
Confidence 35778888999999875432211 10 011 11 23333 8889888888875 89999876543211
Q ss_pred hhHHHHHHHHHHhCCcc
Q 026978 72 LDQLEIVHAIKVAGNIK 88 (230)
Q Consensus 72 ~~~~~ll~Aa~~ag~Vk 88 (230)
. ..+.+.+.+.| ++
T Consensus 88 ~--~~~~~~~e~~g-i~ 101 (449)
T 2w70_A 88 N--ANFAEQVERSG-FI 101 (449)
T ss_dssp C--HHHHHHHHHTT-CE
T ss_pred C--HHHHHHHHHcC-Cc
Confidence 1 13466777788 65
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=84.55 E-value=1.8 Score=37.23 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=44.2
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEec------------C----CC------HHHHHHHhcCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGE------------L----DE------HKKIVSILKEV 59 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD------------~----~d------~~~L~~al~g~ 59 (230)
++.|...|.+|++++|+.. +.+.+. ..|.+++..+ + ++ .+.|.++++++
T Consensus 206 a~~a~~lGa~V~v~D~~~~------~l~~~~---~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~a 276 (405)
T 4dio_A 206 IATARRLGAVVSATDVRPA------AKEQVA---SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQ 276 (405)
T ss_dssp HHHHHHTTCEEEEECSSTT------HHHHHH---HTTCEECCCCC-----------------CHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCEEEEEcCCHH------HHHHHH---HcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCC
Confidence 4566778999999998743 333332 3466654433 2 22 35899999999
Q ss_pred CEEEEcCCCCC----hhhHHHHHHHHH
Q 026978 60 DVVISTVAYPQ----FLDQLEIVHAIK 82 (230)
Q Consensus 60 D~Vi~~~~~~~----~~~~~~ll~Aa~ 82 (230)
|+||.++.... ..-+...++.++
T Consensus 277 DVVI~tvlipg~~ap~Lvt~emv~~Mk 303 (405)
T 4dio_A 277 DIVITTALIPGRPAPRLVTREMLDSMK 303 (405)
T ss_dssp SEEEECCCCSSSCCCCCBCHHHHTTSC
T ss_pred CEEEECCcCCCCCCCEEecHHHHhcCC
Confidence 99999864321 112445555554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=84.48 E-value=0.82 Score=37.68 Aligned_cols=38 Identities=16% Similarity=0.045 Sum_probs=30.6
Q ss_pred HHHhcCCCEEEEcCCCCC-------------hhhHHHHHHHHHHhCCcceEe
Q 026978 53 VSILKEVDVVISTVAYPQ-------------FLDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 53 ~~al~g~D~Vi~~~~~~~-------------~~~~~~ll~Aa~~ag~Vkr~v 91 (230)
.++++|+|+|||+++... +...+++++++++.+ .+.+|
T Consensus 65 ~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~v 115 (303)
T 1o6z_A 65 YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYIS 115 (303)
T ss_dssp GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEE
T ss_pred HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEE
Confidence 467999999999998642 356788999999998 77765
|
| >4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A | Back alignment and structure |
|---|
Probab=84.35 E-value=1.2 Score=39.28 Aligned_cols=111 Identities=13% Similarity=0.072 Sum_probs=64.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|+++|++|++.++..+ + ....|+..|+++..| .+++ .+.++|.||..-+... .-..+.+|
T Consensus 39 A~~l~~~G~~V~~~D~~~~----~----~~~~l~~~gi~~~~g--~~~~----~~~~~d~vV~Spgi~~---~~p~~~~a 101 (494)
T 4hv4_A 39 AEVLANEGYQISGSDLAPN----S----VTQHLTALGAQIYFH--HRPE----NVLDASVVVVSTAISA---DNPEIVAA 101 (494)
T ss_dssp HHHHHHTTCEEEEECSSCC----H----HHHHHHHTTCEEESS--CCGG----GGTTCSEEEECTTSCT---TCHHHHHH
T ss_pred HHHHHhCCCeEEEEECCCC----H----HHHHHHHCCCEEECC--CCHH----HcCCCCEEEECCCCCC---CCHHHHHH
Confidence 5678899999999987532 2 122455679999877 2333 2568999998766542 23457778
Q ss_pred HHhCCcceEecccc-cc--cCCCC---CCCCchhHHHHHHHHHHHHHHHcCCCEEEEe
Q 026978 82 KVAGNIKRFLPSEF-GC--EEDKV---RPLPPFEAYLEKKRIVRRAIEAAQIPYTFVS 133 (230)
Q Consensus 82 ~~ag~Vkr~v~S~~-g~--~~~~~---~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr 133 (230)
++.| ++-+=-.++ +. ..... ... -+ =..++..+...|++.|++.+.+.
T Consensus 102 ~~~g-i~v~~~~e~l~~~~~~~~~IaVTGT-nG--KTTTt~ml~~iL~~~g~~~~~~~ 155 (494)
T 4hv4_A 102 REAR-IPVIRRAEMLAELMRYRHGIAVAGT-HG--KTTTTAMLSSIYAEAGLDPTFVN 155 (494)
T ss_dssp HHTT-CCEEEHHHHHHHHHTTSEEEEEECS-SS--HHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHCC-CCEEcHHHHHHHHhcCCCEEEEecC-CC--hHHHHHHHHHHHHhcCCCCEEEE
Confidence 8888 662211111 00 00000 000 01 12456677788888888655443
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.56 E-value=1.1 Score=37.39 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=34.7
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-----CCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-----EVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-----g~D~Vi~~~~~ 68 (230)
+..+...|.+|++++|+.. +.+.++. .|+..+ .|+.+.+++.+.++ ++|+||++++.
T Consensus 187 ~~~a~~~Ga~V~~~~~~~~------~~~~~~~---~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 187 VQYAKAMGYRVLGIDGGEG------KEELFRS---IGGEVF-IDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp HHHHHHTTCEEEEEECSTT------HHHHHHH---TTCCEE-EETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred HHHHHHCCCcEEEEcCCHH------HHHHHHH---cCCceE-EecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4455668999999998643 3333333 355433 37664333333332 79999999875
|
| >1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 | Back alignment and structure |
|---|
Probab=83.25 E-value=2.2 Score=36.77 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=44.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEe-----cCCCHHHHHHHhc--CCCEEEEcCCCCChhh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEG-----ELDEHKKIVSILK--EVDVVISTVAYPQFLD 73 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~g-----D~~d~~~L~~al~--g~D~Vi~~~~~~~~~~ 73 (230)
+++++.+.|++|+++..+..... +. ..+ ..-.++.+ |+.|.+.+.++++ ++|+|+...+...-.
T Consensus 17 ~~~a~~~~G~~vv~v~~~~~~~~-~~-----~~~--ad~~~~~~p~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~- 87 (451)
T 1ulz_A 17 IIRACKELGIPTVAIYNEVESTA-RH-----VKL--ADEAYMIGTDPLDTYLNKQRIINLALEVGADAIHPGYGFLAEN- 87 (451)
T ss_dssp HHHHHHHHTCCEEEEECGGGTTC-HH-----HHH--SSEEEECCSSTTHHHHCHHHHHHHHHHTTCCEEECCSSTTTTC-
T ss_pred HHHHHHHcCCeEEEEechhhccc-ch-----hhh--CcEEEEcCCCcccccCCHHHHHHHHHHcCCCEEEECCCccccC-
Confidence 36778888999999975433211 10 011 11122222 6778788888774 889988664432111
Q ss_pred HHHHHHHHHHhCCcc
Q 026978 74 QLEIVHAIKVAGNIK 88 (230)
Q Consensus 74 ~~~ll~Aa~~ag~Vk 88 (230)
..+.+.+.+.| ++
T Consensus 88 -~~~~~~~~~~g-i~ 100 (451)
T 1ulz_A 88 -AEFAKMCEEAG-IT 100 (451)
T ss_dssp -HHHHHHHHHTT-CE
T ss_pred -HHHHHHHHHCC-Ce
Confidence 13466677788 65
|
| >1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* | Back alignment and structure |
|---|
Probab=83.16 E-value=3.3 Score=36.15 Aligned_cols=71 Identities=18% Similarity=0.201 Sum_probs=50.4
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhc-CCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~-~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|++.|++|++++.... + .+..+. ..+++++.+++.+. -++++|.||-+.+.. .....+.+.
T Consensus 28 ~~~L~~~ga~V~vi~~~~~----~----~~~~l~~~~~i~~~~~~~~~~-----~l~~~~lVi~at~~~--~~n~~i~~~ 92 (457)
T 1pjq_A 28 ARLLLEAGARLTVNALTFI----P----QFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDDD--TVNQRVSDA 92 (457)
T ss_dssp HHHHHHTTBEEEEEESSCC----H----HHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSCH--HHHHHHHHH
T ss_pred HHHHHhCcCEEEEEcCCCC----H----HHHHHHhcCCEEEEECCCCcc-----ccCCccEEEEcCCCH--HHHHHHHHH
Confidence 5778999999999997532 2 122332 35799999988653 257999999876543 236678899
Q ss_pred HHHhCCcc
Q 026978 81 IKVAGNIK 88 (230)
Q Consensus 81 a~~ag~Vk 88 (230)
|++.| +.
T Consensus 93 a~~~~-i~ 99 (457)
T 1pjq_A 93 AESRR-IF 99 (457)
T ss_dssp HHHTT-CE
T ss_pred HHHcC-CE
Confidence 99998 65
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=82.00 E-value=1.3 Score=36.20 Aligned_cols=52 Identities=12% Similarity=0.032 Sum_probs=33.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.||+|++++|+. ++.+.+ ...|+.....| +.++++++|+||.++..
T Consensus 23 a~~l~~~G~~V~~~dr~~------~~~~~~---~~~g~~~~~~~------~~e~~~~aDvvi~~vp~ 74 (303)
T 3g0o_A 23 ARSCLRAGLSTWGADLNP------QACANL---LAEGACGAAAS------AREFAGVVDALVILVVN 74 (303)
T ss_dssp HHHHHHTTCEEEEECSCH------HHHHHH---HHTTCSEEESS------STTTTTTCSEEEECCSS
T ss_pred HHHHHHCCCeEEEEECCH------HHHHHH---HHcCCccccCC------HHHHHhcCCEEEEECCC
Confidence 567889999999999873 343332 23454432222 33456778888888765
|
| >3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A | Back alignment and structure |
|---|
Probab=81.96 E-value=3.2 Score=32.73 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=39.4
Q ss_pred HHHHHhcCCCEEEEcCCCCChhhHHHHHHHHHHhCCcceEecccccccCCC
Q 026978 51 KIVSILKEVDVVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDK 101 (230)
Q Consensus 51 ~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag~Vkr~v~S~~g~~~~~ 101 (230)
.+.+++...+..+--+|..+++-...+++.|.++| |++++|-.|+.-.+.
T Consensus 178 avAka~a~~g~~lEPTGGIdl~N~~~I~~i~l~aG-v~~viPHIYssIIDk 227 (249)
T 3m0z_A 178 AVAKACAAHDFWLEPTGGIDLENYSEILKIALDAG-VSKIIPHIYSSIIDK 227 (249)
T ss_dssp HHHHHHHHTTCEEEEBSSCCTTTHHHHHHHHHHHT-CSCBCCBCCGGGBCT
T ss_pred HHHHHHHHcCceECCCCCccHhhHHHHHHHHHHcC-CCeecccccceeccC
Confidence 34455555566888888888888899999999999 999999888865543
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=81.82 E-value=0.94 Score=36.68 Aligned_cols=51 Identities=16% Similarity=0.262 Sum_probs=32.9
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.|++|++++|+. ++.+. +...|+++. .+ +.++++++|+||.+++.
T Consensus 16 a~~l~~~g~~V~~~~~~~------~~~~~---~~~~g~~~~----~~---~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 16 AKNLMKHGYPLIIYDVFP------DACKE---FQDAGEQVV----SS---PADVAEKADRIITMLPT 66 (296)
T ss_dssp HHHHHHTTCCEEEECSST------HHHHH---HHTTTCEEC----SS---HHHHHHHCSEEEECCSS
T ss_pred HHHHHHCCCEEEEEeCCH------HHHHH---HHHcCCeec----CC---HHHHHhcCCEEEEeCCC
Confidence 567888999999999863 23332 333465431 23 34556678998888754
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=81.76 E-value=1.8 Score=31.22 Aligned_cols=66 Identities=21% Similarity=0.303 Sum_probs=41.6
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|++.||+|..+.++. . ++ .|+++. .++.++.+.+|+|+.+++. .....+++.|
T Consensus 34 ~~~L~~~G~~V~~vnp~~--~----------~i--~G~~~~-------~s~~el~~~vDlvii~vp~---~~v~~v~~~~ 89 (138)
T 1y81_A 34 LKDLLSKGFEVLPVNPNY--D----------EI--EGLKCY-------RSVRELPKDVDVIVFVVPP---KVGLQVAKEA 89 (138)
T ss_dssp HHHHHHTTCEEEEECTTC--S----------EE--TTEECB-------SSGGGSCTTCCEEEECSCH---HHHHHHHHHH
T ss_pred HHHHHHCCCEEEEeCCCC--C----------eE--CCeeec-------CCHHHhCCCCCEEEEEeCH---HHHHHHHHHH
Confidence 567888899866655432 1 11 344422 1233344579999998873 5566777778
Q ss_pred HHhCCcceEec
Q 026978 82 KVAGNIKRFLP 92 (230)
Q Consensus 82 ~~ag~Vkr~v~ 92 (230)
.++| ++.++.
T Consensus 90 ~~~g-~~~i~~ 99 (138)
T 1y81_A 90 VEAG-FKKLWF 99 (138)
T ss_dssp HHTT-CCEEEE
T ss_pred HHcC-CCEEEE
Confidence 8899 888664
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=81.71 E-value=1.8 Score=34.74 Aligned_cols=52 Identities=15% Similarity=0.271 Sum_probs=34.8
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+..|++.|. +|+++.|+. +|++. +.. ....+ ..+++.++++++|+||++++.
T Consensus 124 ~~~L~~~G~~~I~v~nR~~------~ka~~---la~-~~~~~-----~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 124 IYALLQMGVKDIWVVNRTI------ERAKA---LDF-PVKIF-----SLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp HHHHHHTTCCCEEEEESCH------HHHHT---CCS-SCEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred HHHHHHcCCCEEEEEeCCH------HHHHH---HHH-HcccC-----CHHHHHhhhcCCCEEEECCCC
Confidence 567889998 899999973 34443 321 12211 234567788899999998863
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=81.14 E-value=1.3 Score=33.44 Aligned_cols=57 Identities=25% Similarity=0.374 Sum_probs=34.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHH---HHHHHhc--CCCEEEEcCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHK---KIVSILK--EVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~---~L~~al~--g~D~Vi~~~~~ 68 (230)
++.+...|++|++++|+. ++.+.++ ..|+..+ .|+.+.+ .+.+... ++|+||++++.
T Consensus 56 ~~~~~~~G~~V~~~~~~~------~~~~~~~---~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 117 (198)
T 1pqw_A 56 VSIAKMIGARIYTTAGSD------AKREMLS---RLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLAG 117 (198)
T ss_dssp HHHHHHHTCEEEEEESSH------HHHHHHH---TTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred HHHHHHcCCEEEEEeCCH------HHHHHHH---HcCCCEE-eeCCcHHHHHHHHHHhCCCCCeEEEECCch
Confidence 445566799999999863 2333222 3455432 3666543 3334332 68999999874
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=81.09 E-value=5.4 Score=33.66 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=45.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIV 78 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll 78 (230)
+++++.+.|++|++++...... + .. .+ --+.+..|+.|.+.+.++++ ++|+|+.. +... ....+.
T Consensus 22 ~~~a~~~~G~~~v~v~~~~~~~--~----~~-~~---ad~~~~~~~~d~~~l~~~~~~~~~d~v~~~-~~~~--~~~~~a 88 (403)
T 4dim_A 22 LYKAAKELGIHTIAGTMPNAHK--P----CL-NL---ADEISYMDISNPDEVEQKVKDLNLDGAATC-CLDT--GIVSLA 88 (403)
T ss_dssp HHHHHHHHTCEEEEEECSSCCH--H----HH-HH---CSEEEECCTTCHHHHHHHTTTSCCSEEECC-SCST--THHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCCC--c----ch-hh---CCeEEEecCCCHHHHHHHHHHcCCCEEEeC-Ccch--hHHHHH
Confidence 3677888999999997532111 1 00 11 12567789999999999887 57988854 2211 122445
Q ss_pred HHHHHhC
Q 026978 79 HAIKVAG 85 (230)
Q Consensus 79 ~Aa~~ag 85 (230)
+.+.+.|
T Consensus 89 ~~~~~~g 95 (403)
T 4dim_A 89 RICDKEN 95 (403)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 5666677
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=81.04 E-value=1.6 Score=35.50 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=35.2
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+.+|++.|. +|+++.|+.. |++ .+. .++..+ ..+++.++++++|+||++++.
T Consensus 133 a~~L~~~G~~~v~v~~R~~~------~a~---~la-~~~~~~-----~~~~~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 133 ANELYKIVRPTLTVANRTMS------RFN---NWS-LNINKI-----NLSHAESHLDEFDIIINTTPA 185 (277)
T ss_dssp HHHHHTTCCSCCEEECSCGG------GGT---TCC-SCCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred HHHHHHCCCCEEEEEeCCHH------HHH---HHH-Hhcccc-----cHhhHHHHhcCCCEEEECccC
Confidence 567889998 8999999843 332 232 222221 345677888999999999764
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=80.88 E-value=1.8 Score=36.60 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=35.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++..|++.||+|++++|+. ++.+ .+...|+.. ..+.+++.+..+..|+||.++...
T Consensus 37 ~A~~L~~~G~~V~v~dr~~------~~~~---~l~~~g~~~----~~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 37 MVRRLRKGGHECVVYDLNV------NAVQ---ALEREGIAG----ARSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp HHHHHHHTTCEEEEECSCH------HHHH---HHHTTTCBC----CSSHHHHHHHSCSSCEEEECSCGG
T ss_pred HHHHHHhCCCEEEEEeCCH------HHHH---HHHHCCCEE----eCCHHHHHhcCCCCCEEEEeCCHH
Confidence 3577899999999999973 3433 233445432 234444444334449999988764
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=80.79 E-value=8.9 Score=31.65 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=35.2
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++.|...|++|.+++|+.... .++.-.. ..++|.++++.+|+|+.+++..
T Consensus 155 A~~l~~~G~~V~~~dr~~~~~--------------~~~~~~~----~~~~l~ell~~aDiV~l~~Plt 204 (315)
T 3pp8_A 155 AESLQAWGFPLRCWSRSRKSW--------------PGVESYV----GREELRAFLNQTRVLINLLPNT 204 (315)
T ss_dssp HHHHHTTTCCEEEEESSCCCC--------------TTCEEEE----SHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHCCCEEEEEcCCchhh--------------hhhhhhc----ccCCHHHHHhhCCEEEEecCCc
Confidence 567778899999999975421 2332222 2368899999999999887643
|
| >2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} | Back alignment and structure |
|---|
Probab=80.54 E-value=4 Score=30.04 Aligned_cols=67 Identities=7% Similarity=0.077 Sum_probs=48.3
Q ss_pred HHHhh-CCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 3 KASVS-SGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 3 ~~Ll~-~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
..|.+ .|++|++++=++. .++++..|+.++. .+.-+++|.|+..-.+. +-|..+++-|
T Consensus 52 ~~La~~~g~~V~atDInp~-----------------Av~~v~dDiF~P~--~~~Y~~~DLIYsirPP~--El~~~i~~lA 110 (153)
T 2k4m_A 52 DYIRKHSKVDLVLTDIKPS-----------------HGGIVRDDITSPR--MEIYRGAALIYSIRPPA--EIHSSLMRVA 110 (153)
T ss_dssp HHHHHHSCCEEEEECSSCS-----------------STTEECCCSSSCC--HHHHTTEEEEEEESCCT--TTHHHHHHHH
T ss_pred HHHHHhCCCeEEEEECCcc-----------------ccceEEccCCCCc--ccccCCcCEEEEcCCCH--HHHHHHHHHH
Confidence 45555 8899998875432 1228889998854 23446899998876554 5688999999
Q ss_pred HHhCCcceEe
Q 026978 82 KVAGNIKRFL 91 (230)
Q Consensus 82 ~~ag~Vkr~v 91 (230)
++.| ..-+|
T Consensus 111 ~~v~-adliI 119 (153)
T 2k4m_A 111 DAVG-ARLII 119 (153)
T ss_dssp HHHT-CEEEE
T ss_pred HHcC-CCEEE
Confidence 9999 77666
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=80.09 E-value=0.62 Score=38.46 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=36.3
Q ss_pred HHHHhhCCCeEEEEEc--CCCCCCCcchHhhhhhhcCCCe------EEEEecCCCHHHHHHHhcCCCEEEEcCCCCC
Q 026978 2 VKASVSSGHKTFVYAR--PVTQNSRPSKLEIHKEFQGIGV------TIIEGELDEHKKIVSILKEVDVVISTVAYPQ 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R--~~~~~~~p~k~~~l~~l~~~gv------~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~ 70 (230)
+..|.+.||+|++++| +. ++.+. +...|. ++......+.+++.++++++|+||.++....
T Consensus 16 a~~L~~~g~~V~~~~r~~~~------~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~ 83 (335)
T 1txg_A 16 SVPLVDNGNEVRIWGTEFDT------EILKS---ISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVSTDG 83 (335)
T ss_dssp HHHHHHHCCEEEEECCGGGH------HHHHH---HHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCGGG
T ss_pred HHHHHhCCCeEEEEEccCCH------HHHHH---HHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCChHH
Confidence 4678888999999998 52 23332 222232 1100012233356678899999999997653
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=80.07 E-value=2.5 Score=34.54 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=37.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
++.|...|.+|++++|+. ++.+.+. ..|++.+. .+++.+.++++|+|+.+++..
T Consensus 173 a~~l~~~G~~V~~~d~~~------~~~~~~~---~~g~~~~~-----~~~l~~~l~~aDvVi~~~p~~ 226 (300)
T 2rir_A 173 ARTFAALGANVKVGARSS------AHLARIT---EMGLVPFH-----TDELKEHVKDIDICINTIPSM 226 (300)
T ss_dssp HHHHHHTTCEEEEEESSH------HHHHHHH---HTTCEEEE-----GGGHHHHSTTCSEEEECCSSC
T ss_pred HHHHHHCCCEEEEEECCH------HHHHHHH---HCCCeEEc-----hhhHHHHhhCCCEEEECCChh
Confidence 567788899999999863 2322222 23555432 245788899999999998863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 230 | ||||
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 4e-17 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 4e-16 | |
| d1bqqm_ | 174 | d.92.1.11 (M:) Membrane-type matrix metalloprotein | 0.001 |
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 76.4 bits (186), Expect = 4e-17
Identities = 74/289 (25%), Positives = 107/289 (37%), Gaps = 71/289 (24%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+ KAS+ GH TF+ R T +S K ++ + F+ G I+ G +D+H +V +K VD
Sbjct: 19 VAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVD 78
Query: 61 VVISTVAYPQFLDQLEIVHAIKVAGNIKRFLPSEF------------------------- 95
VVISTV Q Q+ I+ AIK G +KRF PSEF
Sbjct: 79 VVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRR 138
Query: 96 -----GCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLC---------GAYF 141
G V +L N G +
Sbjct: 139 AIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFT 198
Query: 142 VNVLLRPFESHDDVVVYGSGEA--------------------------------KALPPP 169
+ + P + + + P P
Sbjct: 199 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFP 258
Query: 170 EDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218
+I I+I HS+ KGD NFE+G +EAS+LYPD K+TT+D+ L F+
Sbjct: 259 ANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 307
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 73.7 bits (179), Expect = 4e-16
Identities = 90/295 (30%), Positives = 131/295 (44%), Gaps = 78/295 (26%)
Query: 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVD 60
+V AS+S GH T+V RP S K+++ F+ +G +IE LD+H+++V LK+VD
Sbjct: 19 IVNASISLGHPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 77
Query: 61 VVISTVAYP----QFLDQLEIVHAIKVAGNIKRFLPSEFGCEEDKV-RPLPPFEAYLEKK 115
VVIS +A L+QL++V AIK AGNIKRFLPSEFG + D + L P K
Sbjct: 78 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDK 137
Query: 116 RIVRRAIEAAQIPYT----------------------------------------FVSAN 135
R VRRAIEAA IPYT +V +
Sbjct: 138 RKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED 197
Query: 136 LCGAYFVNVLLRPFESHDDVVVYGSG--------------------------------EA 163
G Y + + P + + + +
Sbjct: 198 DVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADM 257
Query: 164 KALPPPEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218
K E I ++ + +GD NFE+G + IEA+KLYP+ K+ T+D L+ ++
Sbjct: 258 KDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 312
|
| >d1bqqm_ d.92.1.11 (M:) Membrane-type matrix metalloproteinase (CDMT1-MMP) {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Matrix metalloproteases, catalytic domain
domain: Membrane-type matrix metalloproteinase (CDMT1-MMP)
species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.1 bits (82), Expect = 0.001
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 155 VVVYGSGEAKALPPPEDIPISIMHSLLAKGDSMNFELGEDDIEA-SKLY 202
V V+ G A L D P +IM D+ NF L +DD +LY
Sbjct: 123 VAVHELGHALGLEHSSD-PSAIMAPFYQWMDTENFVLPDDDRRGIQQLY 170
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 230 | |||
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.93 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.91 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.87 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.7 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.63 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.62 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.59 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.58 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.58 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.54 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.53 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.53 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.53 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.52 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.52 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.49 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.49 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.46 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.4 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.39 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.33 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.28 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.28 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.28 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.25 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.2 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.11 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.81 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.6 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.43 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.4 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.37 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.34 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.34 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.32 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.3 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.3 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.29 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.28 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.27 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.27 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.27 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.26 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.26 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.23 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.22 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.21 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.2 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.17 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.16 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.16 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.14 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.13 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.12 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.11 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.1 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.08 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.08 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.08 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.08 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.05 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.04 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.03 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.01 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.99 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 97.97 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.97 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.96 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.96 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.95 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.95 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.9 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.89 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.88 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.86 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.79 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.74 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.72 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.69 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.68 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.56 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.55 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.5 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.34 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.21 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.16 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.16 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.13 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 96.92 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.82 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.76 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 96.7 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.6 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 96.59 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 96.43 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 95.69 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.62 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.24 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 95.05 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.86 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.07 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.98 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 93.79 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 92.0 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 91.85 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 90.99 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 90.47 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 90.08 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 89.83 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 89.22 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 87.72 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 87.43 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 86.46 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 84.48 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 84.13 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 83.6 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 83.07 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 82.1 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 81.64 | |
| d1wbha1 | 213 | KDPG aldolase {Escherichia coli [TaxId: 562]} | 80.07 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 80.01 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.93 E-value=2.4e-25 Score=184.48 Aligned_cols=215 Identities=45% Similarity=0.728 Sum_probs=164.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----ChhhHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----QFLDQLE 76 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----~~~~~~~ 76 (230)
|+++|+++||+|++++|+..... +.+.+.+..+...+++++.+|+.|.+++.++++++++++++++.. +..++.+
T Consensus 19 l~~~L~~~G~~V~~~~R~~~~~~-~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (312)
T d1qyda_ 19 IVNASISLGHPTYVLFRPEVVSN-IDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLK 97 (312)
T ss_dssp HHHHHHHTTCCEEEECCSCCSSC-HHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHH
T ss_pred HHHHHHhCCCEEEEEECCCcccc-hhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhhhhcccccchhhhhH
Confidence 57899999999999999876554 445555556667899999999999999999999999999998764 4567889
Q ss_pred HHHHHHHhCCcceEecccccccCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccc----c--CCC
Q 026978 77 IVHAIKVAGNIKRFLPSEFGCEEDK-VRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVL----L--RPF 149 (230)
Q Consensus 77 ll~Aa~~ag~Vkr~v~S~~g~~~~~-~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~----~--~~~ 149 (230)
++++|++++.+++|++|++|...+. ..+..|...++..|..+++++++.+++|+++|++.+++...+.+ . ...
T Consensus 98 ~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~ 177 (312)
T d1qyda_ 98 LVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPP 177 (312)
T ss_dssp HHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCC
T ss_pred HHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhc
Confidence 9999999874667778999875433 23334556778899999999999999999999999998654332 1 222
Q ss_pred CCCCcEEEecCCCccc------------------------------------------------------C---------
Q 026978 150 ESHDDVVVYGSGEAKA------------------------------------------------------L--------- 166 (230)
Q Consensus 150 ~~~~~~~i~g~G~~~~------------------------------------------------------~--------- 166 (230)
. +.+.++|+|++++ .
T Consensus 178 ~--~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~~~~ 255 (312)
T d1qyda_ 178 R--DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLA 255 (312)
T ss_dssp S--SEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHH
T ss_pred c--cccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHHHHH
Confidence 3 6788889988776 0
Q ss_pred -----CCCCChhhhhhhheeecCCcccccCCCCcchhcccCCCCccccHHHHHHHhh
Q 026978 167 -----PPPEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218 (230)
Q Consensus 167 -----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~p~~~~~t~~e~l~~~~ 218 (230)
.++.+....+.++++.+|+.+.++++....++++||||+++||++|||+.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~l~Pd~~~tt~~e~l~~~v 312 (312)
T d1qyda_ 256 DMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 312 (312)
T ss_dssp HHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSSEEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred HHHhcCCcHhHHHHHHHHHHhcCcccccccCcchhhHHHhCCCCCcCcHHHHHHhhC
Confidence 1111122334455566677666676655788999999999999999999764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.91 E-value=7.8e-24 Score=174.08 Aligned_cols=216 Identities=44% Similarity=0.704 Sum_probs=164.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
|+++|+++||+|++++|+......+++...+..+...+++++.+|+.+...+.+++++++.|+|+++..+...+.+++++
T Consensus 19 l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~a 98 (307)
T d1qyca_ 19 VAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKA 98 (307)
T ss_dssp HHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHH
T ss_pred HHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeecccccccchhhHHHHH
Confidence 47899999999999999876543234455555666789999999999999999999999999999998888899999999
Q ss_pred HHHhCCcceEe-cccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccc---c-CCCCCCCcE
Q 026978 81 IKVAGNIKRFL-PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVL---L-RPFESHDDV 155 (230)
Q Consensus 81 a~~ag~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~---~-~~~~~~~~~ 155 (230)
+++++ +++++ .|+++...+......+...+...+...+.++++.+++|+++||+.+++.....+ + .... ++..
T Consensus 99 ~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~-~~~~ 176 (307)
T d1qyca_ 99 IKEVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP-RDKV 176 (307)
T ss_dssp HHHHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCC-SSEE
T ss_pred HHHhc-cccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecCCCccchhhhhhhhhh-cccc
Confidence 99999 66655 577776555443333445566888899999999999999999999998654432 1 1111 2677
Q ss_pred EEecCCCccc--------------------------------------------------------------------CC
Q 026978 156 VVYGSGEAKA--------------------------------------------------------------------LP 167 (230)
Q Consensus 156 ~i~g~G~~~~--------------------------------------------------------------------~~ 167 (230)
.++++|++++ .+
T Consensus 177 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 256 (307)
T d1qyca_ 177 VILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTP 256 (307)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHTSC
T ss_pred eeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHHHHHHHhcC
Confidence 8888888776 11
Q ss_pred CCCChhhhhhhheeecCCcccccCCCCcchhcccCCCCccccHHHHHHHhh
Q 026978 168 PPEDIPISIMHSLLAKGDSMNFELGEDDIEASKLYPDFKFTTIDQLLDIFL 218 (230)
Q Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~p~~~~~t~~e~l~~~~ 218 (230)
.+......+.++.+.+++++.++++..+.++++||||++++|++|||+.++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~t~ee~l~~~v 307 (307)
T d1qyca_ 257 FPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 307 (307)
T ss_dssp TTHHHHHHHHHHHHTTCTTTSSCCCTTEEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHhccccccccCcchhhHHHhCCCCCcCcHHHHHHHhC
Confidence 111122344556667778776777655788999999999999999999764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=8.7e-22 Score=155.14 Aligned_cols=158 Identities=14% Similarity=0.125 Sum_probs=116.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC--------hh
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------FL 72 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------~~ 72 (230)
|+++|+++||+|++++|+.++.. .....+++++.||++|.++|.++++|+|+|||+++... ..
T Consensus 19 v~~~Ll~~g~~V~~~~R~~~~~~---------~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~~~~~~~~~ 89 (205)
T d1hdoa_ 19 TLAQAVQAGYEVTVLVRDSSRLP---------SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSE 89 (205)
T ss_dssp HHHHHHHTTCEEEEEESCGGGSC---------SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHH
T ss_pred HHHHHHHCcCEEEEEEcChhhcc---------cccccccccccccccchhhHHHHhcCCCEEEEEeccCCchhhhhhhHH
Confidence 47899999999999999865321 23457899999999999999999999999999998642 45
Q ss_pred hHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhcccccCCCCC
Q 026978 73 DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFVNVLLRPFES 151 (230)
Q Consensus 73 ~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~~~~~~~~~~ 151 (230)
++++++++|+++| |+|||. |+.|...+.........+++..|...|++|++++++||+|||+.+++... .
T Consensus 90 ~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~-------~- 160 (205)
T d1hdoa_ 90 GARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL-------T- 160 (205)
T ss_dssp HHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCC-------C-
T ss_pred HHHHHHHHHHhcC-CCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceecCCCC-------c-
Confidence 7899999999999 999986 55554322211111234678899999999999999999999999876321 2
Q ss_pred CCcEEEecCCCcccCCCCCChhhhhh
Q 026978 152 HDDVVVYGSGEAKALPPPEDIPISIM 177 (230)
Q Consensus 152 ~~~~~i~g~G~~~~~~~~~~~~~~~~ 177 (230)
....+..+|+.+...+..+.++.++
T Consensus 161 -~~~~~~~~~~~~~~~i~~~DvA~~~ 185 (205)
T d1hdoa_ 161 -GAYTVTLDGRGPSRVISKHDLGHFM 185 (205)
T ss_dssp -SCCEEESSSCSSCSEEEHHHHHHHH
T ss_pred -ccEEEeeCCCCCCCcCCHHHHHHHH
Confidence 3445566666554444333333333
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=4.2e-17 Score=138.19 Aligned_cols=175 Identities=14% Similarity=0.124 Sum_probs=115.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh---hhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK---EFQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~---~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~------ 69 (230)
|+++|+++||+|++++|..+... ..+.+.+. .....+++++.+|++|.+++.++++++ |+|||+++..
T Consensus 17 lv~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~ 95 (357)
T d1db3a_ 17 LAEFLLEKGYEVHGIKRRASSFN-TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSF 95 (357)
T ss_dssp HHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTT
T ss_pred HHHHHHHCcCEEEEEECCCcccc-hhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhh
Confidence 58899999999999999754321 11211111 112468999999999999999999965 9999999864
Q ss_pred ---------ChhhHHHHHHHHHHhCCcc---eEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----c
Q 026978 70 ---------QFLDQLEIVHAIKVAGNIK---RFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 70 ---------~~~~~~~ll~Aa~~ag~Vk---r~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
++.++.||+++|++.+ ++ |||. | .||.. .++.++..|..+|..+|..+|++++. .
T Consensus 96 ~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~ 174 (357)
T d1db3a_ 96 ESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY 174 (357)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 2467999999999987 64 6885 3 37753 23445566777899999999988865 5
Q ss_pred CCCEEEEeccccchhhc-cc-----c---c-CCCCCCCcEEEecCCCcccCCCCC-Chhhhhh
Q 026978 126 QIPYTFVSANLCGAYFV-NV-----L---L-RPFESHDDVVVYGSGEAKALPPPE-DIPISIM 177 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~-~~-----~---~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~~ 177 (230)
+++++++||+..++... +. + + .....+....++|+|++.+.-+.. |++.++.
T Consensus 175 ~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~ 237 (357)
T d1db3a_ 175 GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237 (357)
T ss_dssp CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHH
T ss_pred CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHH
Confidence 89999999876655321 10 1 1 111111446678999887644433 4444443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=3.4e-15 Score=125.13 Aligned_cols=136 Identities=18% Similarity=0.282 Sum_probs=103.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|...... +....+..+...+++++++|++|.+.|.++++ ++|+|||+|+..
T Consensus 16 l~~~L~~~g~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~ 93 (338)
T d1udca_ 16 TCVQLLQNGHDVIILDNLCNSKR--SVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKP 93 (338)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCT--THHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHHCcCEEEEEECCCCcch--hhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCH
Confidence 57899999999999998765432 12222233445789999999999999999998 899999999864
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---cccccCC-----CCCCCCchhHHHHHHHHHHHHHHH-----cCCCE
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEED-----KVRPLPPFEAYLEKKRIVRRAIEA-----AQIPY 129 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~~-----~~~~~~p~~~~~~~K~~~e~~l~~-----~gl~~ 129 (230)
++.++++++++|++.+ ++|||. | .|+.... +.....|..+|..+|...|+++.+ .++++
T Consensus 94 ~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 172 (338)
T d1udca_ 94 LEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred HHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeE
Confidence 2568999999999999 999985 2 2442211 112335667889999999998874 47999
Q ss_pred EEEeccccch
Q 026978 130 TFVSANLCGA 139 (230)
Q Consensus 130 tilr~g~~~~ 139 (230)
+++|++..++
T Consensus 173 ~ilR~~~v~G 182 (338)
T d1udca_ 173 ALLRYFNPVG 182 (338)
T ss_dssp EEEEECEEEC
T ss_pred EEEeeccEEe
Confidence 9999877665
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.1e-15 Score=121.92 Aligned_cols=125 Identities=17% Similarity=0.122 Sum_probs=100.7
Q ss_pred CHHHHhhCC--CeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSG--HKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g--~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|+++|+++| ++|++++|+..... . .....+++..+|+++.+++.++++|+|+|||+++..
T Consensus 30 l~~~Ll~~g~~~~v~~~~R~~~~~~-~--------~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~ 100 (232)
T d2bkaa1 30 LLKEILEQGLFSKVTLIGRRKLTFD-E--------EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF 100 (232)
T ss_dssp HHHHHHHHTCCSEEEEEESSCCCCC-S--------GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEEecChhhhc-c--------cccceeeeeeecccccccccccccccccccccccccccccchhhh
Confidence 578999999 48999999865432 1 113578899999999999999999999999999875
Q ss_pred ---ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-EEEEeccccchhh
Q 026978 70 ---QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP-YTFVSANLCGAYF 141 (230)
Q Consensus 70 ---~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~-~tilr~g~~~~~~ 141 (230)
++....+++++|++.| +++||+ |..+.... +...|..+|..+|+++++.+++ +|++|||.+++..
T Consensus 101 ~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~------~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~ 170 (232)
T d2bkaa1 101 VRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS------SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR 170 (232)
T ss_dssp HHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred hhhcccccceeeecccccC-ccccccCCccccccC------ccchhHHHHHHhhhccccccccceEEecCceeecCC
Confidence 2457889999999999 999986 55554322 2246789999999999999987 9999999988753
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.59 E-value=6.4e-15 Score=124.39 Aligned_cols=154 Identities=15% Similarity=0.128 Sum_probs=112.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|+++|+++||+|++++|...... + ......++..+|+.|.+.+.++++++|+|||+++..
T Consensus 31 lv~~L~~~g~~V~~~d~~~~~~~-~--------~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 101 (363)
T d2c5aa1 31 IARRLKHEGHYVIASDWKKNEHM-T--------EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHS 101 (363)
T ss_dssp HHHHHHHTTCEEEEEESSCCSSS-C--------GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHH
T ss_pred HHHHHHHCcCEEEEEeCCCccch-h--------hhcccCcEEEeechhHHHHHHHhhcCCeEeecccccccccccccccc
Confidence 57899999999999988655432 1 113567899999999999999999999999999764
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-cc---ccccCC-----------CCCCCCchhHHHHHHHHHHHHHHH----c
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-SE---FGCEED-----------KVRPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S~---~g~~~~-----------~~~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
++.++.+++++|++.| ++|||. |+ ||.... +..+..|..+|..+|..+|++++. .
T Consensus 102 ~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~ 180 (363)
T d2c5aa1 102 VIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF 180 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2457899999999999 999985 32 443211 112335666788999999998864 5
Q ss_pred CCCEEEEeccccchhhccc------c-------cCCCCCCCcEEEecCCCcccC
Q 026978 126 QIPYTFVSANLCGAYFVNV------L-------LRPFESHDDVVVYGSGEAKAL 166 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~~------~-------~~~~~~~~~~~i~g~G~~~~~ 166 (230)
|++++++|++..++..... . ..... .....+|+|++.+.
T Consensus 181 gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~g~~~rd 232 (363)
T d2c5aa1 181 GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTST--DRFEMWGDGLQTRS 232 (363)
T ss_dssp CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCS--SCEEEESCSCCEEC
T ss_pred CCCEEEEEeeeEeccCCccccccccccccccccccccc--ccccccCCCCeEEE
Confidence 9999999987666533210 0 01222 56888999988663
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=1.2e-14 Score=122.13 Aligned_cols=136 Identities=14% Similarity=0.188 Sum_probs=102.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||+|++++|...... +.......+...+++++.+|++|.+.+..+++ ++|+|||+++..
T Consensus 17 lv~~Ll~~g~~V~~~d~~~~~~~--~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~ 94 (347)
T d1z45a2 17 TVVELIENGYDCVVADNLSNSTY--DSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIP 94 (347)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCT--HHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSH
T ss_pred HHHHHHHCcCeEEEEECCCCcch--hHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEccccccccccccCc
Confidence 57899999999999987654321 11112233456789999999999999999888 889999999875
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-c---ccccc--------CCCCCCCCchhHHHHHHHHHHHHHHH------c
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCE--------EDKVRPLPPFEAYLEKKRIVRRAIEA------A 125 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~--------~~~~~~~~p~~~~~~~K~~~e~~l~~------~ 125 (230)
++.++.+|+++|++.+ ++|||. | .||.. ..+..+..|..+|..+|..+|+++++ .
T Consensus 95 ~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ 173 (347)
T d1z45a2 95 LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 173 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhcc
Confidence 2467899999999999 999985 2 36632 12234445667888999999988754 4
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
+++++++|++..++
T Consensus 174 ~~~~~~lR~~~v~g 187 (347)
T d1z45a2 174 SWKFAILRYFNPIG 187 (347)
T ss_dssp SCEEEEEEECEEEC
T ss_pred CCcEEEEeecceEe
Confidence 78999999765553
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.58 E-value=2.5e-14 Score=120.16 Aligned_cols=133 Identities=16% Similarity=0.138 Sum_probs=100.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC-HHHHHHHhcCCCEEEEcCCCC---ChhhHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE-HKKIVSILKEVDVVISTVAYP---QFLDQLE 76 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d-~~~L~~al~g~D~Vi~~~~~~---~~~~~~~ 76 (230)
|+++|+++||+|++++|+.++. +.+.+. ...|++++.+|+.| .+.+..+++++|++++..... ++..+.+
T Consensus 19 lv~~Ll~~G~~V~~l~R~~~~~----~~~~~~--~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 92 (350)
T d1xgka_ 19 LIRVAAAVGHHVRAQVHSLKGL----IAEELQ--AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKD 92 (350)
T ss_dssp HHHHHHHTTCCEEEEESCSCSH----HHHHHH--TSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHH
T ss_pred HHHHHHhCCCeEEEEECCcchh----hhhhhc--ccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecccccchhhhhhhH
Confidence 5889999999999999987642 222222 24699999999988 456788999999999876543 3678899
Q ss_pred HHHHHHHhCCcceEe-cccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccccchhhc
Q 026978 77 IVHAIKVAGNIKRFL-PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANLCGAYFV 142 (230)
Q Consensus 77 ll~Aa~~ag~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~~~~~~~ 142 (230)
+++||+++| ++|++ .|+.+...... ..+..+++++|...++++++.+++|+++|++.|++.+.
T Consensus 93 ~~~aa~~ag-v~~~v~~Ss~~~~~~~~--~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~ 156 (350)
T d1xgka_ 93 LADAAKRAG-TIQHYIYSSMPDHSLYG--PWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFT 156 (350)
T ss_dssp HHHHHHHHS-CCSEEEEEECCCGGGTS--SCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred HHHHHHHhC-CCceEEEeeccccccCC--cccchhhhhhHHHHHHHHHhhccCceeeeeceeecccc
Confidence 999999999 76654 56554322111 11223567899999999999999999999999998654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.54 E-value=5.1e-14 Score=116.55 Aligned_cols=159 Identities=13% Similarity=0.080 Sum_probs=111.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~------- 70 (230)
|++.|+++||+|++++|..+... .+ .+..+ ...+++++.+|+.|.+.+.+.+.. .++++|+++...
T Consensus 16 l~~~Ll~~g~~V~~~~r~~~~~~-~~---~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (321)
T d1rpna_ 16 LAKLLLEKGYRVHGLVARRSSDT-RW---RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQ 91 (321)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CH---HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTS
T ss_pred HHHHHHHCcCEEEEEECCCCccc-HH---HHHHhcccCCcEEEEccccChHHhhhhhccccccccccccccccccccccc
Confidence 57899999999999999875432 12 22222 235799999999999999998884 578888876542
Q ss_pred --------hhhHHHHHHHHHHhCCcceEecc-c---ccccC----CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEE
Q 026978 71 --------FLDQLEIVHAIKVAGNIKRFLPS-E---FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYT 130 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag~Vkr~v~S-~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~t 130 (230)
+.++.+++++|++.+..++|+.+ + ||... ++.++..|..+|..+|...|+.+++ .+++++
T Consensus 92 ~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 171 (321)
T d1rpna_ 92 PVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 171 (321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred hHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcCCcEE
Confidence 45789999999999944466652 2 44321 2345556777899999999998864 689999
Q ss_pred EEeccccchhhc-cc-----c---c---CCCCCCCcEEEecCCCccc
Q 026978 131 FVSANLCGAYFV-NV-----L---L---RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 131 ilr~g~~~~~~~-~~-----~---~---~~~~~~~~~~i~g~G~~~~ 165 (230)
++|++..++... +. + + .... +....+|+|++.+
T Consensus 172 ~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~--~~~i~~g~g~~~r 216 (321)
T d1rpna_ 172 SGILFNHESPLRGIEFVTRKVTDAVARIKLGK--QQELRLGNVDAKR 216 (321)
T ss_dssp EEEECCEECTTSCTTSHHHHHHHHHHHHHTTS--CSCEEESCTTCEE
T ss_pred EEEEecccCCCccccccHHHHHHHHHHHHhCC--CCcEEECCCCeEE
Confidence 999865554321 11 1 1 1222 5567789999876
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.53 E-value=1e-14 Score=123.59 Aligned_cols=161 Identities=16% Similarity=0.235 Sum_probs=111.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~------- 70 (230)
|+++|++.||+|++..++.+... +.+.+..+ ...+++++.+|++|.+.+.++++ .+|+|||+|+...
T Consensus 16 l~~~L~~~g~~vv~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~ 92 (361)
T d1kewa_ 16 VVRHIIKNTQDTVVNIDKLTYAG---NLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITG 92 (361)
T ss_dssp HHHHHHHHCSCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHC
T ss_pred HHHHHHHCCCCEEEEEeCCCccc---cHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhC
Confidence 57899999998766555433221 11122222 34689999999999999999988 4799999998652
Q ss_pred --------hhhHHHHHHHHHHhC--------CcceEec-c---cccccCC--------------CCCCCCchhHHHHHHH
Q 026978 71 --------FLDQLEIVHAIKVAG--------NIKRFLP-S---EFGCEED--------------KVRPLPPFEAYLEKKR 116 (230)
Q Consensus 71 --------~~~~~~ll~Aa~~ag--------~Vkr~v~-S---~~g~~~~--------------~~~~~~p~~~~~~~K~ 116 (230)
+.++.+++++|++.+ .++|||. | .||.... +..+..|...|..+|.
T Consensus 93 p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~ 172 (361)
T d1kewa_ 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172 (361)
T ss_dssp THHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHH
Confidence 456899999999875 0348884 2 3664211 1223456677899999
Q ss_pred HHHHHHHH----cCCCEEEEeccccchhhc------cccc-CCCCCCCcEEEecCCCccc
Q 026978 117 IVRRAIEA----AQIPYTFVSANLCGAYFV------NVLL-RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 117 ~~e~~l~~----~gl~~tilr~g~~~~~~~------~~~~-~~~~~~~~~~i~g~G~~~~ 165 (230)
.+|.+++. .+++++++|++..++... +.++ .+.. ++++.++|+|++.+
T Consensus 173 ~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~-g~~~~v~g~g~~~r 231 (361)
T d1kewa_ 173 SSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-GKPLPIYGKGDQIR 231 (361)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHH-TCCEEEETTSCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHc-CCCcEEeCCCCeEE
Confidence 99998865 699999999977766332 1111 1112 37788999999876
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=9.8e-16 Score=127.31 Aligned_cols=157 Identities=18% Similarity=0.225 Sum_probs=105.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
|+++|+++||+|++++|..+.. ++ .+.. .....+++...|. +..++.++|+|||+|+...
T Consensus 17 lv~~L~~~g~~V~~~d~~~~~~--~~---~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~~~~~~~~~~~~ 86 (312)
T d2b69a1 17 LTDKLMMDGHEVTVVDNFFTGR--KR---NVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASPASPPNYMYNPI 86 (312)
T ss_dssp HHHHHHHTTCEEEEEECCSSCC--GG---GTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSCCSHHHHTTCHH
T ss_pred HHHHHHHCcCEEEEEeCCCcCC--HH---HHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECcccCCchhHHhCHH
Confidence 5789999999999999865432 11 1111 1233456666655 4456779999999998642
Q ss_pred ------hhhHHHHHHHHHHhCCcceEec-c---cccccC----C-----CCCCCCchhHHHHHHHHHHHHHHH----cCC
Q 026978 71 ------FLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----D-----KVRPLPPFEAYLEKKRIVRRAIEA----AQI 127 (230)
Q Consensus 71 ------~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~-----~~~~~~p~~~~~~~K~~~e~~l~~----~gl 127 (230)
+.++.+|+++|++.+ +| ||. | .||... . +..+..|..+|..+|..+|.+++. .|+
T Consensus 87 ~~~~~Nv~g~~~ll~~~~~~~-~k-~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ 164 (312)
T d2b69a1 87 KTLKTNTIGTLNMLGLAKRVG-AR-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 164 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-CE-EEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHcC-Cc-EEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999999999 75 553 3 366421 1 113445777788999999998864 699
Q ss_pred CEEEEeccccchhhc--------cccc-CCCCCCCcEEEecCCCcccCCCCC
Q 026978 128 PYTFVSANLCGAYFV--------NVLL-RPFESHDDVVVYGSGEAKALPPPE 170 (230)
Q Consensus 128 ~~tilr~g~~~~~~~--------~~~~-~~~~~~~~~~i~g~G~~~~~~~~~ 170 (230)
+++++|++..++... +.++ .... ++++.++|+|++.+.-++.
T Consensus 165 ~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~-g~~i~i~~~g~~~r~~i~v 215 (312)
T d2b69a1 165 EVRVARIFNTFGPRMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYV 215 (312)
T ss_dssp CEEEEEECCEECTTCCTTCCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEH
T ss_pred cEEEEEeeeEECCCCCCCCccHHHHHHHHHHc-CCCeEEeCCCCeeEccEEH
Confidence 999999988876332 1111 1112 3788999999987644333
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.53 E-value=3.7e-14 Score=118.98 Aligned_cols=171 Identities=12% Similarity=0.092 Sum_probs=117.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-----------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP----------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~----------- 69 (230)
|++.|+++||+|++++|+..... .....+..+...+++++.+|+.|.+.+..+++++|.|+|+++..
T Consensus 18 lv~~L~~~g~~v~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~ 95 (346)
T d1oc2a_ 18 FVHYVYNNHPDVHVTVLDKLTYA--GNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSP 95 (346)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTT--CCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHH
T ss_pred HHHHHHHCCCCeEEEEEeCCCcc--ccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhhcccccchhhCccc
Confidence 57899999999888776532211 11112234446789999999999999999999999999999865
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEec---ccccccC----------------CCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLP---SEFGCEE----------------DKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~---S~~g~~~----------------~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
++.++.+++++|++.+ .+.++. +.||... .+..+..|...|..+|..+|.+++.
T Consensus 96 ~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~ 174 (346)
T d1oc2a_ 96 FIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV 174 (346)
T ss_dssp HHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred ceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2468999999999999 554433 2365310 1112334666788999999988864
Q ss_pred --cCCCEEEEeccccchhhc-cc-----cc--CCCCCCCcEEEecCCCcccCCCCC-Chhhhh
Q 026978 125 --AQIPYTFVSANLCGAYFV-NV-----LL--RPFESHDDVVVYGSGEAKALPPPE-DIPISI 176 (230)
Q Consensus 125 --~gl~~tilr~g~~~~~~~-~~-----~~--~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~ 176 (230)
.+++++++||+..++... .. .+ .... ..+.++|+|++.+..+.. |.+.++
T Consensus 175 ~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~--~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 175 RSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAG--IKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp HHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHT--CCCEEETTSCCEEECEEHHHHHHHH
T ss_pred HHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcC--CceeEeCCCCccccccchhhHHHHH
Confidence 689999999977776321 11 11 1222 668899999988755544 443333
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.52 E-value=9.3e-14 Score=116.20 Aligned_cols=172 Identities=14% Similarity=0.070 Sum_probs=122.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh----hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE----FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~----l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------- 69 (230)
|+++|+++||+|++++|..+... . ....+.. .....++++.+|..|...+.....+.++|+|+++..
T Consensus 32 lv~~L~~~g~~V~~~d~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~ 109 (341)
T d1sb8a_ 32 LLETLLKLDQKVVGLDNFATGHQ-R-NLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSIN 109 (341)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCH-H-HHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHH
T ss_pred HHHHHHHCcCEEEEEECCCCcch-h-hHHHHHHhhhhcccCCeeEEeecccccccccccccccccccccccccccccccc
Confidence 57899999999999998654321 1 1111111 123578999999999999999999999999998864
Q ss_pred --------ChhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cCCCE
Q 026978 70 --------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQIPY 129 (230)
Q Consensus 70 --------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~ 129 (230)
++.++.+|+++|++++ +++||. | .||.. .++..+..|...|..+|...|++++. .++++
T Consensus 110 ~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~ 188 (341)
T d1sb8a_ 110 DPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFST 188 (341)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhCCCe
Confidence 2568999999999999 999985 2 36642 23445667777888999999998764 58999
Q ss_pred EEEeccccchhhc-cc-----c----c-CCCCCCCcEEEecCCCcccCCCCC-Chhhhh
Q 026978 130 TFVSANLCGAYFV-NV-----L----L-RPFESHDDVVVYGSGEAKALPPPE-DIPISI 176 (230)
Q Consensus 130 tilr~g~~~~~~~-~~-----~----~-~~~~~~~~~~i~g~G~~~~~~~~~-~~~~~~ 176 (230)
+++||+.+++... +. + + .... ++++.++|+|++.+.-+.. |++.++
T Consensus 189 ~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~-g~~i~~~g~g~~~r~~i~v~D~~~a~ 246 (341)
T d1sb8a_ 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFCYIENTVQAN 246 (341)
T ss_dssp EEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred EEEEeceeeccCcCCCCchhhhHHHHHHHHHc-CCceEEcCCCCEEEEEEEEeccchhh
Confidence 9999987665432 11 1 1 1111 3678999999987744433 444443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.3e-13 Score=115.26 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=112.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh----hhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK----EFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~----~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~---- 70 (230)
|+++|+++||+|++++|..+... +.+.+.+. .....+++++.+|++|.+.+..+++ +.++|+|+++...
T Consensus 17 l~~~Ll~~g~~V~~i~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~ 95 (347)
T d1t2aa_ 17 LAEFLLEKGYEVHGIVRRSSSFN-TGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKIS 95 (347)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHH
T ss_pred HHHHHHHCcCEEEEEECCCcccc-hhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeeeeeccccchh
Confidence 57899999999999999765322 11211111 1112478999999999999999997 4578999887642
Q ss_pred -----------hhhHHHHHHHHHHhCCcc---eEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -----------FLDQLEIVHAIKVAGNIK---RFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~Vk---r~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.++.+++++|+++| +. |||. | .||.. .++..+..|..+|..+|..+|+++..
T Consensus 96 ~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~ 174 (347)
T d1t2aa_ 96 FDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 174 (347)
T ss_dssp HHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999999988 53 7874 3 47742 23445667777899999999998864
Q ss_pred cCCCEEEEeccccchhhc-cc-----c----c--CCCCCCCcEEEecCCCccc
Q 026978 125 AQIPYTFVSANLCGAYFV-NV-----L----L--RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 125 ~gl~~tilr~g~~~~~~~-~~-----~----~--~~~~~~~~~~i~g~G~~~~ 165 (230)
.+++++++|++..++... +. . + .... ....++|+|++.+
T Consensus 175 ~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~--~~~~~~g~g~~~r 225 (347)
T d1t2aa_ 175 YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQ--LECFSLGNLDAKR 225 (347)
T ss_dssp HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTS--CSCEEESCTTCEE
T ss_pred hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCC--cceeecCCCccee
Confidence 589999999866655321 10 0 1 1223 5678899998765
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.49 E-value=2.4e-13 Score=112.86 Aligned_cols=159 Identities=13% Similarity=0.142 Sum_probs=114.7
Q ss_pred CHHHHhhCCCeEEE------EEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----
Q 026978 1 MVKASVSSGHKTFV------YARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP---- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~------l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~---- 69 (230)
|++.|+++||+|.+ +++...... . ..+..+ ...+++++.+|..+...+.....+.|+|+|+++..
T Consensus 16 l~~~L~~~g~~v~~~~~i~~~d~~~~~~~-~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 91 (322)
T d1r6da_ 16 FVRQLLAGAYPDVPADEVIVLDSLTYAGN-R---ANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDR 91 (322)
T ss_dssp HHHHHHHTSCTTSCCSEEEEEECCCTTCC-G---GGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHH
T ss_pred HHHHHHHCCCCccCCceEEEEeCCCcccc-H---hHhhhhhcCCCeEEEEeccccchhhhccccccceEEeecccccccc
Confidence 57899999986543 433332221 1 111122 34689999999999999999999999999999765
Q ss_pred -----------ChhhHHHHHHHHHHhCCcceEec-c---ccccc----CCCCCCCCchhHHHHHHHHHHHHHHH----cC
Q 026978 70 -----------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCE----EDKVRPLPPFEAYLEKKRIVRRAIEA----AQ 126 (230)
Q Consensus 70 -----------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~----~g 126 (230)
++.++.+|+++|++.+ +++||. | .||.. .++..+..|..+|..+|..+|.+++. .+
T Consensus 92 ~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 170 (322)
T d1r6da_ 92 SIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG 170 (322)
T ss_dssp HHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2467899999999999 999985 2 36642 23445566777888999999988864 68
Q ss_pred CCEEEEeccccchhhc------cccc--CCCCCCCcEEEecCCCcccC
Q 026978 127 IPYTFVSANLCGAYFV------NVLL--RPFESHDDVVVYGSGEAKAL 166 (230)
Q Consensus 127 l~~tilr~g~~~~~~~------~~~~--~~~~~~~~~~i~g~G~~~~~ 166 (230)
++++++|++..++... +.++ ... ++.+.++|+|++.+.
T Consensus 171 ~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~--~~~i~v~~~g~~~r~ 216 (322)
T d1r6da_ 171 LDVRITRCCNNYGPYQHPEKLIPLFVTNLLD--GGTLPLYGDGANVRE 216 (322)
T ss_dssp CCEEEEEECEEECTTCCTTSHHHHHHHHHHT--TCCEEEETTSCCEEE
T ss_pred CCEEEEEeeeEECcCCCcCcHHHHHHHHHHc--CCCcEEecCCCeEEc
Confidence 9999999987776432 1112 123 377999999998763
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=2.2e-13 Score=113.82 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=115.5
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHH-HhcCCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVS-ILKEVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~-al~g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++|| +|+++++...... . .....+++++.+|++|.+.+.+ +++++|+|||+++...
T Consensus 16 l~~~Ll~~g~~~V~~ld~~~~~~~------~--~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~ 87 (342)
T d2blla1 16 LTERLLREDHYEVYGLDIGSDAIS------R--FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNP 87 (342)
T ss_dssp HHHHHHHSTTCEEEEEESCCGGGG------G--GTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSH
T ss_pred HHHHHHHCCCCEEEEEeCCCcchh------h--hccCCCeEEEECccCChHHHHHHHHhCCCccccccccccccccccCC
Confidence 5789999995 8999988643211 1 1235789999999988655554 7889999999999752
Q ss_pred -------hhhHHHHHHHHHHhCCcceEecc---cccccCC----C-------CCCCCchhHHHHHHHHHHHHHHH----c
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLPS---EFGCEED----K-------VRPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~S---~~g~~~~----~-------~~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
+.++.+++++|++.+ ++.++.| .||.... + .....|...|..+|..+|++++. .
T Consensus 88 ~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (342)
T d2blla1 88 LRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE 166 (342)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccc-ccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc
Confidence 467999999999999 7776653 2553211 1 11224556788899999998865 5
Q ss_pred CCCEEEEeccccchhhccc--------------cc-CCCCCCCcEEEecCCCcccCCCC-CChhhhhhhh
Q 026978 126 QIPYTFVSANLCGAYFVNV--------------LL-RPFESHDDVVVYGSGEAKALPPP-EDIPISIMHS 179 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~~--------------~~-~~~~~~~~~~i~g~G~~~~~~~~-~~~~~~~~~~ 179 (230)
|++++++|++.+++..... ++ .+.. ++.+.++|+|++.+.-+. .|++.++...
T Consensus 167 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~g~~~r~~i~v~D~~~a~~~~ 235 (342)
T d2blla1 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (342)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred CceeEEeeccccccccccccccccccccccchHHHHHHHh-CCCccccCCCCeeeeecccccccceeeee
Confidence 8999999987777532211 01 1111 378899999998774443 3555554444
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.46 E-value=1.6e-13 Score=116.93 Aligned_cols=138 Identities=14% Similarity=0.150 Sum_probs=96.4
Q ss_pred CHHHHhhCCCeEEEEEcC-------------CCCCC-CcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEE
Q 026978 1 MVKASVSSGHKTFVYARP-------------VTQNS-RPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV--DVVIS 64 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~-------------~~~~~-~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~ 64 (230)
|+++|+++||+|++++.. ..... .++....+..+...+++++.+|++|.+.|.++++++ |+|||
T Consensus 17 lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViH 96 (393)
T d1i24a_ 17 TALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVH 96 (393)
T ss_dssp HHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHHHhhcchheec
Confidence 578999999999999621 11000 011122222334578999999999999999999965 99999
Q ss_pred cCCCC------------------ChhhHHHHHHHHHHhCCcce-Eec-cc---ccccC---C--------------CCCC
Q 026978 65 TVAYP------------------QFLDQLEIVHAIKVAGNIKR-FLP-SE---FGCEE---D--------------KVRP 104 (230)
Q Consensus 65 ~~~~~------------------~~~~~~~ll~Aa~~ag~Vkr-~v~-S~---~g~~~---~--------------~~~~ 104 (230)
+|+.. ++.++.+++++|++.+ +++ |+. |+ |+... . +..+
T Consensus 97 lAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (393)
T d1i24a_ 97 FGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYP 175 (393)
T ss_dssp CCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECC
T ss_pred cccccccccccccccccccccccccccccHHHHHHHHhc-cccceeeccccccccccccccccccccccccccccccccc
Confidence 99753 2567999999999999 665 553 22 33211 0 0123
Q ss_pred CCchhHHHHHHHHHHHHHH----HcCCCEEEEeccccch
Q 026978 105 LPPFEAYLEKKRIVRRAIE----AAQIPYTFVSANLCGA 139 (230)
Q Consensus 105 ~~p~~~~~~~K~~~e~~l~----~~gl~~tilr~g~~~~ 139 (230)
..|..+|..+|..+|.+++ +.+++++++|++..++
T Consensus 176 ~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G 214 (393)
T d1i24a_ 176 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 214 (393)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred cccccHHHHHhhhhcccccccccccceeeeecccccccC
Confidence 3566678899999998875 4799999999977665
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.40 E-value=1.4e-12 Score=108.41 Aligned_cols=161 Identities=11% Similarity=0.087 Sum_probs=107.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh----hhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK----EFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~----~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~---- 70 (230)
|++.|+++||+|++++|..+... +++...+. ......++++.+|+.+.+.+.++++ ++|+|||+|+...
T Consensus 17 lv~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~ 95 (339)
T d1n7ha_ 17 LTEFLLGKGYEVHGLIRRSSNFN-TQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVS 95 (339)
T ss_dssp HHHHHHHTTCEEEEEECCCSSCC-CTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHH
T ss_pred HHHHHHHCcCEEEEEECCCcccc-hhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhcccccccccc
Confidence 57899999999999999754221 11211111 1223568899999999999999887 6699999998752
Q ss_pred -----------hhhHHHHHHHHHHhCCcc-----eEecc--c--cccc---CCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------FLDQLEIVHAIKVAGNIK-----RFLPS--E--FGCE---EDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~Vk-----r~v~S--~--~g~~---~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+..++++++++++ .+ +++.+ . ++.. .++..+..|...|..+|..+|+++..
T Consensus 96 ~~~p~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 174 (339)
T d1n7ha_ 96 FEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYRE 174 (339)
T ss_dssp HHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccccccccccchhhhhhhhcc-cccccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 346788999988754 33 45532 2 2321 23445566777899999999988754
Q ss_pred -cCCCEEEEeccccchhhcc-c-----c----c--CCCCCCCcEEEecCCCccc
Q 026978 125 -AQIPYTFVSANLCGAYFVN-V-----L----L--RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 125 -~gl~~tilr~g~~~~~~~~-~-----~----~--~~~~~~~~~~i~g~G~~~~ 165 (230)
.+++++++|++..++.... . + . .... ....++|+|.+.+
T Consensus 175 ~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~--~~~~~~g~~~~~r 226 (339)
T d1n7ha_ 175 AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGL--QTKLFLGNLQASR 226 (339)
T ss_dssp HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTS--CCCEEESCTTCEE
T ss_pred HhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCC--CCeEEeCCCCccc
Confidence 6999999998766653211 1 0 0 1122 4567789998875
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.39 E-value=3.3e-12 Score=105.65 Aligned_cols=163 Identities=9% Similarity=0.078 Sum_probs=106.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-cCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~-------- 69 (230)
|+++|+++||+|++++|-.... +...+..+ ...+++++.+|++|.++|.++++++ |+|||+++..
T Consensus 16 lv~~Ll~~g~~V~~id~~~~~~----~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~ 91 (338)
T d1orra_ 16 LASFALSQGIDLIVFDNLSRKG----ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDN 91 (338)
T ss_dssp HHHHHHHTTCEEEEEECCCSTT----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHC
T ss_pred HHHHHHHCcCEEEEEECCCccc----chhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecccccccccccC
Confidence 5789999999999998644322 11122222 2468999999999999999999975 9999999875
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEe-ccc----ccccCC--------------------CCCCCCchhHHHHHHHH
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFL-PSE----FGCEED--------------------KVRPLPPFEAYLEKKRI 117 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v-~S~----~g~~~~--------------------~~~~~~p~~~~~~~K~~ 117 (230)
++.++.||+++|++.+ +++++ .|+ ++.... ...+..|...|...|..
T Consensus 92 ~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~ 170 (338)
T d1orra_ 92 PCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGA 170 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCccccccccccccch
Confidence 2568999999999999 77654 332 221100 01223455667788888
Q ss_pred HHHHHH----HcCCCEEEEeccccc-hhhcc--------cc----cC-CCCCCCcEEEecCCCcccCCC
Q 026978 118 VRRAIE----AAQIPYTFVSANLCG-AYFVN--------VL----LR-PFESHDDVVVYGSGEAKALPP 168 (230)
Q Consensus 118 ~e~~l~----~~gl~~tilr~g~~~-~~~~~--------~~----~~-~~~~~~~~~i~g~G~~~~~~~ 168 (230)
.|.++. ..++..+.+++...+ +.... .+ +. ....++.+.++|+|++.+..+
T Consensus 171 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~ 239 (338)
T d1orra_ 171 ADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 239 (338)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred hhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence 887654 368888887753322 21111 11 10 111137899999998776433
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.1e-11 Score=103.37 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=100.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC----CcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCC--CEEEEcCCCCC----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS----RPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEV--DVVISTVAYPQ---- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~----~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~--D~Vi~~~~~~~---- 70 (230)
|+++|+++||+|++++|...... .++..+.++.+...+++++.+|++|.+.|.+++.+. ++++|+++...
T Consensus 18 lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~ 97 (346)
T d1ek6a_ 18 TVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGES 97 (346)
T ss_dssp HHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHH
T ss_pred HHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccccccccCcHhh
Confidence 57899999999999986432211 123333444455678999999999999999999866 57889998652
Q ss_pred -----------hhhHHHHHHHHHHhCCcceEecc----cccccCC-----CCCCCCchhHHHHHHHHHHHHHHH-----c
Q 026978 71 -----------FLDQLEIVHAIKVAGNIKRFLPS----EFGCEED-----KVRPLPPFEAYLEKKRIVRRAIEA-----A 125 (230)
Q Consensus 71 -----------~~~~~~ll~Aa~~ag~Vkr~v~S----~~g~~~~-----~~~~~~p~~~~~~~K~~~e~~l~~-----~ 125 (230)
+.++.+++++|++.| |++|+.+ .||.... ......|..+|..+|...|+.+++ .
T Consensus 98 ~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~ 176 (346)
T d1ek6a_ 98 VQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK 176 (346)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCT
T ss_pred HhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhcc
Confidence 467899999999999 9998852 2553221 111223556788999999887764 4
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
+++++++|++..++
T Consensus 177 ~~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 177 TWNAVLLRYFNPTG 190 (346)
T ss_dssp TCEEEEEEECEEEC
T ss_pred CCceEEEeecceec
Confidence 89999999866654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.28 E-value=2.9e-11 Score=102.29 Aligned_cols=138 Identities=15% Similarity=0.213 Sum_probs=96.2
Q ss_pred CHHHHhh-CCCeEEEEEcCCCC---CC-CcchHhh---hh-------hhcCCCeEEEEecCCCHHHHHHHhc---CCCEE
Q 026978 1 MVKASVS-SGHKTFVYARPVTQ---NS-RPSKLEI---HK-------EFQGIGVTIIEGELDEHKKIVSILK---EVDVV 62 (230)
Q Consensus 1 lv~~Ll~-~g~~V~~l~R~~~~---~~-~p~k~~~---l~-------~l~~~gv~vv~gD~~d~~~L~~al~---g~D~V 62 (230)
|+++||+ .||+|+++++-... .. ...+... ++ ......++++.+|++|.+.|.++++ ++|+|
T Consensus 18 lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~~~d~V 97 (383)
T d1gy8a_ 18 FVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAV 97 (383)
T ss_dssp HHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhhhhccceeehh
Confidence 5788986 78999999752211 10 0001000 00 0113468999999999999998886 78999
Q ss_pred EEcCCCC---------------ChhhHHHHHHHHHHhCCcceEec----ccccccC-----------CCCCCCCchhHHH
Q 026978 63 ISTVAYP---------------QFLDQLEIVHAIKVAGNIKRFLP----SEFGCEE-----------DKVRPLPPFEAYL 112 (230)
Q Consensus 63 i~~~~~~---------------~~~~~~~ll~Aa~~ag~Vkr~v~----S~~g~~~-----------~~~~~~~p~~~~~ 112 (230)
||+++.. ++.++.+++++|++.+ +++++. +.|+... .+..+..|..+|.
T Consensus 98 iH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 176 (383)
T d1gy8a_ 98 VHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYG 176 (383)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHH
T ss_pred hcccccccccccccccccccccccccccccchhhhccC-CcccccccccccccccccccccccccccccccCCCCCCHHH
Confidence 9999864 2467899999999999 999874 2233211 1123345677899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEeccccch
Q 026978 113 EKKRIVRRAIEA----AQIPYTFVSANLCGA 139 (230)
Q Consensus 113 ~~K~~~e~~l~~----~gl~~tilr~g~~~~ 139 (230)
.+|...|++++. .|++++++|++..++
T Consensus 177 ~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG 207 (383)
T d1gy8a_ 177 ESKLIAERMIRDCAEAYGIKGICLRYFNACG 207 (383)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred hhHhHHHHHHHHHHHHhCCCEEEEecceeec
Confidence 999999998865 699999999876654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.28 E-value=1.9e-11 Score=95.70 Aligned_cols=130 Identities=18% Similarity=0.196 Sum_probs=93.5
Q ss_pred CHHHHhhCCCe--EEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHK--TFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~--V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
|++.|+++||+ |++++|+.+ +.+ .+ ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 19 l~~~Ll~~g~~v~v~~~~R~~~------~~~---~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 88 (252)
T d2q46a1 19 VYKKLKEGSDKFVAKGLVRSAQ------GKE---KI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDP 88 (252)
T ss_dssp HHHHHHHTTTTCEEEEEESCHH------HHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCT
T ss_pred HHHHHHHCCCcEEEEEEcCCHH------HHH---hc-cCCcEEEEeeeccccccccccccceeeEEEEeeccccccccch
Confidence 47899999986 555677632 222 23 4689999999999999999999999999998753
Q ss_pred -------------------ChhhHHHHHHHHHHhCCcceEec-ccccccCCCC-CCCCchhHHHHHHHHHHHHHHHcCCC
Q 026978 70 -------------------QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKV-RPLPPFEAYLEKKRIVRRAIEAAQIP 128 (230)
Q Consensus 70 -------------------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~-~~~~p~~~~~~~K~~~e~~l~~~gl~ 128 (230)
++.+.+++++.++..+ ++++.. |..+...... ....+...+...+...+.+.++++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (252)
T d2q46a1 89 TKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTP 167 (252)
T ss_dssp TSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHHSSSC
T ss_pred hhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccccccccchhhhhhhhhhhhhccccc
Confidence 1357899999999998 888764 4333221111 00011123456677778888889999
Q ss_pred EEEEeccccchhh
Q 026978 129 YTFVSANLCGAYF 141 (230)
Q Consensus 129 ~tilr~g~~~~~~ 141 (230)
||++||+.+++..
T Consensus 168 ~~ilRp~~v~g~~ 180 (252)
T d2q46a1 168 YTIIRAGGLLDKE 180 (252)
T ss_dssp EEEEEECEEECSC
T ss_pred ceeecceEEECCC
Confidence 9999999998753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.28 E-value=6.8e-12 Score=104.87 Aligned_cols=133 Identities=17% Similarity=0.102 Sum_probs=92.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-----cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-----QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP------ 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-----~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~------ 69 (230)
|+++|+++||+|++++|+.+. ...++.+ ......++.+|+.|.+++.+++.++|+|+|+++..
T Consensus 27 l~~~Ll~~G~~V~~~vR~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~~~~~~~~~ 100 (342)
T d1y1pa1 27 VVEQLLEHGYKVRGTARSASK------LANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY 100 (342)
T ss_dssp HHHHHHHTTCEEEEEESSHHH------HHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCH
T ss_pred HHHHHHHCcCEEEEEeCCchh------HHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhcccccccccc
Confidence 578999999999999997432 2222111 12234568899999999999999999999999874
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEec-cccc----ccC-----------------------CCCCCCCchhHHHHHH
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLP-SEFG----CEE-----------------------DKVRPLPPFEAYLEKK 115 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g----~~~-----------------------~~~~~~~p~~~~~~~K 115 (230)
++.++.+++++|++.+.+++||. |+.+ ... .+..+..|..+|..+|
T Consensus 101 ~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK 180 (342)
T d1y1pa1 101 DEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASK 180 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHH
T ss_pred cccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchh
Confidence 25689999999998633999885 4321 110 0111223455688999
Q ss_pred HHHHHHHH----Hc--CCCEEEEeccccch
Q 026978 116 RIVRRAIE----AA--QIPYTFVSANLCGA 139 (230)
Q Consensus 116 ~~~e~~l~----~~--gl~~tilr~g~~~~ 139 (230)
..+|.++. +. ++..+.++|+..++
T Consensus 181 ~~~E~~~~~~~~~~~~~~~~~~i~p~~v~G 210 (342)
T d1y1pa1 181 TEAELAAWKFMDENKPHFTLNAVLPNYTIG 210 (342)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEEEESEEEC
T ss_pred HhHHHHHHHhhhhcccccccceecccceeC
Confidence 99887553 33 46778888776655
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.25 E-value=1.4e-11 Score=96.08 Aligned_cols=118 Identities=15% Similarity=0.184 Sum_probs=84.5
Q ss_pred CHHHHhhCCC--eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCC--------
Q 026978 1 MVKASVSSGH--KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-EVDVVISTVAYP-------- 69 (230)
Q Consensus 1 lv~~Ll~~g~--~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~-------- 69 (230)
|+++|+++|| .|.+++|+.... ...+ ..+..|..++...+. ++|+|||+++..
T Consensus 18 lv~~L~~~~~~~~v~~~~r~~~~~-------------~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~ 81 (212)
T d2a35a1 18 LLDRILSEPTLAKVIAPARKALAE-------------HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEE 81 (212)
T ss_dssp HHHHHHHCTTCCEEECCBSSCCCC-------------CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCHHHHSSHH
T ss_pred HHHHHHhCCCeEEEEEEeCCchhh-------------cccc---cccccchhhhhhccccchheeeeeeeeecccccccc
Confidence 5789999998 566666654321 1223 334445455555544 689999999764
Q ss_pred -----ChhhHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-EEEEeccccchhh
Q 026978 70 -----QFLDQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEAAQIP-YTFVSANLCGAYF 141 (230)
Q Consensus 70 -----~~~~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~-~tilr~g~~~~~~ 141 (230)
++..+.+++++|++++ +++|+. |+.|.... +...|..+|..+|+++++.+++ ||++||+.+++..
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~------~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~ 153 (212)
T d2a35a1 82 AFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK------SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR 153 (212)
T ss_dssp HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT------CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred ccccchhhhhhhccccccccc-ccccccccccccccc------cccchhHHHHHHhhhccccccccceeeCCcceeCCc
Confidence 2457899999999999 999985 66665322 2246779999999999998886 9999999988753
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=7.1e-11 Score=96.99 Aligned_cols=139 Identities=19% Similarity=0.156 Sum_probs=98.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~--------- 69 (230)
|+++|+++||.|+++.+.. ..|+.|.+.+.+.++ ..|+|+|+++..
T Consensus 18 l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~ 74 (315)
T d1e6ua_ 18 IRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTY 74 (315)
T ss_dssp HHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred HHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhcCCCEEEEcchhccccccchhh
Confidence 5789999999998765421 137788888988887 579999998653
Q ss_pred -------ChhhHHHHHHHHHHhCCcceEec-c---cccccC----CCC-----CCCCchhHHHHHHHHHHHHHHH----c
Q 026978 70 -------QFLDQLEIVHAIKVAGNIKRFLP-S---EFGCEE----DKV-----RPLPPFEAYLEKKRIVRRAIEA----A 125 (230)
Q Consensus 70 -------~~~~~~~ll~Aa~~ag~Vkr~v~-S---~~g~~~----~~~-----~~~~p~~~~~~~K~~~e~~l~~----~ 125 (230)
++.++.+|+++|++++ |+|||+ | .||... ++. .+..|..+|..+|..+|++++. .
T Consensus 75 ~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 153 (315)
T d1e6ua_ 75 PADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 153 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2568899999999999 999985 3 366321 111 2222345688999999998864 6
Q ss_pred CCCEEEEeccccchhhcc------c----c-----c--CCCCCCCcEEEecCCCccc
Q 026978 126 QIPYTFVSANLCGAYFVN------V----L-----L--RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 126 gl~~tilr~g~~~~~~~~------~----~-----~--~~~~~~~~~~i~g~G~~~~ 165 (230)
|++++++||+..++.... . + . .... ..+.++|+|...+
T Consensus 154 gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~g~~~~ 208 (315)
T d1e6ua_ 154 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKA--PDVVVWGSGTPMR 208 (315)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTC--SEEEEESCSCCEE
T ss_pred CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccC--CceEEcCCCceEE
Confidence 999999999777763210 0 0 1 1222 7788999998754
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.11 E-value=8.3e-10 Score=91.79 Aligned_cols=159 Identities=14% Similarity=0.153 Sum_probs=104.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~--------- 69 (230)
|++.|+++||+|++++|..... +.-.+.. .. ..+++++.+|++|.+.+.+++++ .|+|+|+++..
T Consensus 24 lv~~Ll~~g~~V~~~~r~~~~~--~~~~~~~-~~-~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~ 99 (356)
T d1rkxa_ 24 LSLWLQTMGATVKGYSLTAPTV--PSLFETA-RV-ADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP 99 (356)
T ss_dssp HHHHHHHTTCEEEEEESSCSSS--SCHHHHT-TT-TTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHHCCCEEEEEECCCCcc--HHHHhhh-hc-ccCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCC
Confidence 5789999999999999986543 2111110 11 35899999999999999999884 59999999875
Q ss_pred ------ChhhHHHHHHHHHHhCCcceEeccc---ccc-c-----CCCCCCCCchhHHHHHHHHHHHHHHH----------
Q 026978 70 ------QFLDQLEIVHAIKVAGNIKRFLPSE---FGC-E-----EDKVRPLPPFEAYLEKKRIVRRAIEA---------- 124 (230)
Q Consensus 70 ------~~~~~~~ll~Aa~~ag~Vkr~v~S~---~g~-~-----~~~~~~~~p~~~~~~~K~~~e~~l~~---------- 124 (230)
++.++.+++++|++.+..++++.++ ++. . ..+..+..|..+|...|...|..++.
T Consensus 100 ~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~ 179 (356)
T d1rkxa_ 100 VETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPAN 179 (356)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred ccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchh
Confidence 2457899999999987345455422 111 1 11123334555677788877765542
Q ss_pred ---cCCCEEEEeccccchhhc---ccc----c-CCCCCCCcEEEecCCCccc
Q 026978 125 ---AQIPYTFVSANLCGAYFV---NVL----L-RPFESHDDVVVYGSGEAKA 165 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~~~~---~~~----~-~~~~~~~~~~i~g~G~~~~ 165 (230)
.++.++++||+..++... ..+ + .... +...+++++++.+
T Consensus 180 ~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~ 229 (356)
T d1rkxa_ 180 YGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQ--SQPVIIRNPHAIR 229 (356)
T ss_dssp HHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHT--TCCEECSCTTCEE
T ss_pred ccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhC--CCceEEeeccccc
Confidence 478899999876654221 111 1 1222 4556788887665
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.81 E-value=1.9e-08 Score=80.36 Aligned_cols=116 Identities=15% Similarity=0.076 Sum_probs=86.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~-------- 70 (230)
|+++|+++||+|++++|+. +|+.|.+++.++++ +.|+|||+++...
T Consensus 17 l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~ 72 (281)
T d1vl0a_ 17 IQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQY 72 (281)
T ss_dssp HHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCH
T ss_pred HHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHcCCCEEEeeccccccccccccc
Confidence 5788999999999998741 27889999999998 5699999998763
Q ss_pred -------hhhHHHHHHHHHHhCCcceEeccc---ccccC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLPSE---FGCEE----DKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~S~---~g~~~----~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
.....++.++++..+ ...+..|+ |+... .+..+..|...|...|...|+++++.+++++++|++.
T Consensus 73 ~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~ 151 (281)
T d1vl0a_ 73 DLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAW 151 (281)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECS
T ss_pred hhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCccccceeE
Confidence 234566777888777 55444433 33221 2233344555677899999999999999999999999
Q ss_pred cchhh
Q 026978 137 CGAYF 141 (230)
Q Consensus 137 ~~~~~ 141 (230)
+++..
T Consensus 152 vyG~~ 156 (281)
T d1vl0a_ 152 LYGDG 156 (281)
T ss_dssp EESSS
T ss_pred EeCCC
Confidence 88754
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.60 E-value=6.5e-08 Score=77.61 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcC--CCEEEEcCCCCC--------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKE--VDVVISTVAYPQ-------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g--~D~Vi~~~~~~~-------- 70 (230)
|++.|+++|+.| ++.+... . +.+|++|.+.+.+++++ .|+|||+++...
T Consensus 16 l~~~L~~~g~~v-~~~~~~~------------~--------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~ 74 (298)
T d1n2sa_ 16 LQRSLAPVGNLI-ALDVHSK------------E--------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEP 74 (298)
T ss_dssp HHHHTTTTSEEE-EECTTCS------------S--------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCH
T ss_pred HHHHHHhCCCEE-EEECCCc------------c--------ccCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCc
Confidence 467888888755 4444321 1 13699999999999985 499999998652
Q ss_pred -------hhhHHHHHHHHHHhCCcceEeccc---cccc----CCCCCCCCchhHHHHHHHHHHHHHHHcCCCEEEEeccc
Q 026978 71 -------FLDQLEIVHAIKVAGNIKRFLPSE---FGCE----EDKVRPLPPFEAYLEKKRIVRRAIEAAQIPYTFVSANL 136 (230)
Q Consensus 71 -------~~~~~~ll~Aa~~ag~Vkr~v~S~---~g~~----~~~~~~~~p~~~~~~~K~~~e~~l~~~gl~~tilr~g~ 136 (230)
+....+|+++|++.+ ++.+..|+ |+.. ..+..+..|...|...|..+|++++.....+.+++.+.
T Consensus 75 ~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~ 153 (298)
T d1n2sa_ 75 ELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSW 153 (298)
T ss_dssp HHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEEECS
T ss_pred cccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhcccccccccc
Confidence 356789999999998 77655432 3321 12334445667888999999999988777777776654
Q ss_pred cc
Q 026978 137 CG 138 (230)
Q Consensus 137 ~~ 138 (230)
++
T Consensus 154 ~~ 155 (298)
T d1n2sa_ 154 VY 155 (298)
T ss_dssp EE
T ss_pred ee
Confidence 43
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.43 E-value=2.9e-06 Score=66.96 Aligned_cols=126 Identities=15% Similarity=0.145 Sum_probs=84.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.. +.+.+ +++ ...+..+.+|++|++++.++++ ++|++||+++...
T Consensus 22 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~ 94 (244)
T d1nffa_ 22 HVRAMVAEGAKVVFGDILDE------EGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG 94 (244)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-hCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCC
Confidence 47889999999999999742 33222 233 3467889999999988876654 6899999998751
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ -.++|. |..|.... + ....|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~ltk~lA~ 168 (244)
T d1nffa_ 95 TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT---V--ACHGYTATKFAVRGLTKSTAL 168 (244)
T ss_dssp CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---T--TBHHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccc---c--cccchhhHHHHHHHHHHHHHH
Confidence 122 234445556665 456763 33442211 1 124677899888876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 169 el~~~gIrVN~I~PG~i~T 187 (244)
T d1nffa_ 169 ELGPSGIRVNSIHPGLVKT 187 (244)
T ss_dssp HHGGGTEEEEEEEECCBCS
T ss_pred HhcccCEEEEEEeeCCccC
Confidence 689999999998753
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=7.5e-07 Score=71.38 Aligned_cols=133 Identities=13% Similarity=0.053 Sum_probs=80.7
Q ss_pred CHHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEE-EecCCCHHHHHHHhcCCCEEEEcCCCC---------
Q 026978 1 MVKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTII-EGELDEHKKIVSILKEVDVVISTVAYP--------- 69 (230)
Q Consensus 1 lv~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv-~gD~~d~~~L~~al~g~D~Vi~~~~~~--------- 69 (230)
||++|+++|+ +|+++.+-..+. +...+..+ .-..+. ..|+.+.......+..+++|+|+++..
T Consensus 15 lv~~L~~~g~~~V~~~d~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~ 88 (307)
T d1eq2a_ 15 IVKALNDKGITDILVVDNLKDGT----KFVNLVDL--NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY 88 (307)
T ss_dssp HHHHHHTTTCCCEEEEECCSSGG----GGHHHHTS--CCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHH
T ss_pred HHHHHHhCCCCeEEEEECCCCcc----hhhccccc--chhhhccchHHHHHHhhhhcccchhhhhhhccccccccccccc
Confidence 5789999995 799987543321 11111111 111111 112222222223345789999998754
Q ss_pred ----ChhhHHHHHHHHHHhCCcceEeccc---c-cccC---CCCCCCCchhHHHHHHHHHHHHHHH----cCCCEEEEec
Q 026978 70 ----QFLDQLEIVHAIKVAGNIKRFLPSE---F-GCEE---DKVRPLPPFEAYLEKKRIVRRAIEA----AQIPYTFVSA 134 (230)
Q Consensus 70 ----~~~~~~~ll~Aa~~ag~Vkr~v~S~---~-g~~~---~~~~~~~p~~~~~~~K~~~e~~l~~----~gl~~tilr~ 134 (230)
++.++.+++++++..+ ++.++.|+ + +... .+.....|...|..+|...|.+++. .+++++++|+
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~ 167 (307)
T d1eq2a_ 89 MMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRY 167 (307)
T ss_dssp HHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEE
T ss_pred cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc
Confidence 2467889999999999 88776542 2 2111 1112223556788999999988875 6899999998
Q ss_pred cccchh
Q 026978 135 NLCGAY 140 (230)
Q Consensus 135 g~~~~~ 140 (230)
...++.
T Consensus 168 ~~vyGp 173 (307)
T d1eq2a_ 168 FNVYGP 173 (307)
T ss_dssp CEEESS
T ss_pred eeEeec
Confidence 766653
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.37 E-value=2.6e-06 Score=67.14 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=84.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
+++.|+++|++|.+..|+.. +++.+. .+ ...+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 20 ~a~~l~~~G~~Vv~~~r~~~------~l~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~ 92 (243)
T d1q7ba_ 20 IAETLAARGAKVIGTATSEN------GAQAISDYL-GANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDN 92 (243)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCC
T ss_pred HHHHHHHcCCEEEEEeCCHH------HHHHHHHHh-CCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhcccc
Confidence 47889999999999999742 333322 23 3467889999999988877665 6899999998651
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ -.++|. |..|..... ....|..+|..++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~-----~~~~Y~asKaal~~lt~~lA~ 166 (243)
T d1q7ba_ 93 LLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNG-----GQANYAAAKAGLIGFSKSLAR 166 (243)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----TCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCC-----CCHHHHHHHHHHHHHHHHHHH
Confidence 122 344455556665 467763 333332111 124677999988876653
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 167 ela~~gIrVN~I~PG~i~ 184 (243)
T d1q7ba_ 167 EVASRGITVNVVAPGFIE 184 (243)
T ss_dssp HHGGGTEEEEEEEECSBC
T ss_pred HhCccCeEEEEEecceEe
Confidence 68999999999875
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.34 E-value=8.5e-06 Score=64.23 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=84.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+... ...+.++.+ ...+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~~~~~~~~~----~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~ 95 (247)
T d2ew8a1 21 IAERFAVEGADIAIADLVPAP----EAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP 95 (247)
T ss_dssp HHHHHHHTTCEEEEEESSCCH----HHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCchH----HHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 478899999999999997531 111122222 3457889999999998887654 6899999998751
Q ss_pred ----------------hh----hHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FL----DQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~----~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+. ..+.++..+++.+ -.++|. |..|..... ....|..+|..+..+.+.
T Consensus 96 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~-----~~~~Y~asKaal~~ltk~lA~e 169 (247)
T d2ew8a1 96 FDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE-----AYTHYISTKAANIGFTRALASD 169 (247)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS-----SCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCc-----ccccchhhhccHHHHHHHHHHH
Confidence 12 2344555666666 467663 434432111 124677899888765543
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 170 la~~gIrVN~I~PG~i~ 186 (247)
T d2ew8a1 170 LGKDGITVNAIAPSLVR 186 (247)
T ss_dssp HGGGTEEEEEEEECCC-
T ss_pred hcccCeEEEEEeeCCCC
Confidence 68999999999875
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.34 E-value=6.1e-06 Score=65.40 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=84.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.. +.+. .+++ ...+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~ 93 (254)
T d1hdca_ 21 AARQAVAAGARVVLADVLDE------EGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93 (254)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCcccccc
Confidence 47899999999999999742 2222 2233 2458899999999998877654 6899999998651
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ -.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~ 167 (254)
T d1hdca_ 94 FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL---A--LTSSYGASKWGVRGLSKLAAV 167 (254)
T ss_dssp CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccc---c--chhhHHHHHHHHHHHHHHHHH
Confidence 122 344445556665 467764 33332211 1 124677899888876553
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 168 e~a~~gIrVN~I~PG~v~ 185 (254)
T d1hdca_ 168 ELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp HHGGGTEEEEEEEECSBC
T ss_pred HhCCCceEEEEeeeCccc
Confidence 68999999999875
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.32 E-value=2.1e-06 Score=68.16 Aligned_cols=126 Identities=18% Similarity=0.210 Sum_probs=83.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|+.. +++. .++++. ..+..+.+|++|++++.++++ ++|++|+++|...
T Consensus 18 ia~~la~~Ga~V~i~~r~~~------~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~ 91 (257)
T d2rhca1 18 IARRLGKEGLRVFVCARGEE------GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG 91 (257)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccC
Confidence 47889999999999999743 2221 122322 357889999999998887655 5799999998641
Q ss_pred -------------------hhhHHHHHHHHH------HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 -------------------FLDQLEIVHAIK------VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~------~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.+...+.+++. +.+ -.++|. |..+..... ....|..+|..+..+.+
T Consensus 92 ~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~-----~~~~Y~asKaal~~ltk 165 (257)
T d2rhca1 92 GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV-----HAAPYSASKHGVVGFTK 165 (257)
T ss_dssp CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccccccc-----cchhHHHHHHHHHHHHH
Confidence 235556666553 344 456653 333322111 12467789998887765
Q ss_pred H-------cCCCEEEEeccccc
Q 026978 124 A-------AQIPYTFVSANLCG 138 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~ 138 (230)
. .|+....|.||++.
T Consensus 166 ~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 166 ALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp HHHHHTTTSEEEEEEEEECSBC
T ss_pred HHHHHhhhhCcEEEEEeeCCCC
Confidence 4 57889999999874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=9.4e-06 Score=63.79 Aligned_cols=128 Identities=17% Similarity=0.172 Sum_probs=83.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
++++|+++|++|.+..|+.. +++.+.. +..+++.+.+|++|.++++++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~~~~r~~~------~l~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~ 93 (242)
T d1cyda_ 21 TVKALHASGAKVVAVTRTNS------DLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEV 93 (242)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHH
Confidence 47889999999999999742 3222221 23578999999999999999988 5699999998641
Q ss_pred ------------hhhHHHHHHHH----HHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cC
Q 026978 71 ------------FLDQLEIVHAI----KVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQ 126 (230)
Q Consensus 71 ------------~~~~~~ll~Aa----~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~g 126 (230)
+.+...+.+++ .+.+.-.++|. |+...... . .....|..+|..++.+.+. .|
T Consensus 94 ~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--~--~~~~~Y~asKaal~~lt~~lA~e~~~~g 169 (242)
T d1cyda_ 94 TKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT--F--PNLITYSSTKGAMTMLTKAMAMELGPHK 169 (242)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--C--TTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc--C--CccccccchHHHHHHHHHHHHHHhCccC
Confidence 22333444332 22221245553 33221111 1 1124677899988876653 68
Q ss_pred CCEEEEeccccch
Q 026978 127 IPYTFVSANLCGA 139 (230)
Q Consensus 127 l~~tilr~g~~~~ 139 (230)
+....|.||+..-
T Consensus 170 IrvN~I~PG~i~T 182 (242)
T d1cyda_ 170 IRVNSVNPTVVLT 182 (242)
T ss_dssp EEEEEEEECCBTT
T ss_pred eecccCCCCCccC
Confidence 9999999998753
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.30 E-value=3.2e-06 Score=67.22 Aligned_cols=130 Identities=13% Similarity=0.173 Sum_probs=84.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchH-hhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKL-EIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~-~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.... -++. +.+.......+..+.+|++|.+++.++++ +.|++||+++...
T Consensus 20 iA~~la~~Ga~V~~~~r~~~~~--~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~ 97 (260)
T d1x1ta1 20 IATALAAQGADIVLNGFGDAAE--IEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97 (260)
T ss_dssp HHHHHHHTTCEEEEECCSCHHH--HHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcHHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCC
Confidence 4688999999999999974211 0111 11111113457789999999998887765 6899999998651
Q ss_pred -----------------hh----hHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FL----DQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~----~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+. ..+.++..+++.+ -.++|. |..|.... + ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~ 171 (260)
T d1x1ta1 98 LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS---A--NKSAYVAAKHGVVGFTKVTAL 171 (260)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceecc---C--CcchhhhhhhhHHHhHHHHHH
Confidence 12 2344556666666 467763 43443211 1 124677899888876553
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||++-
T Consensus 172 el~~~gIrVN~I~PG~i~ 189 (260)
T d1x1ta1 172 ETAGQGITANAICPGWVR 189 (260)
T ss_dssp HHTTTTEEEEEEEECCBC
T ss_pred HhchhCcEEEEEecCCCC
Confidence 68999999999874
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.29 E-value=7.1e-06 Score=64.52 Aligned_cols=124 Identities=7% Similarity=0.027 Sum_probs=81.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.. +.+.+. +..+++.+.+|++|.+++.++++ +.|++||+++...
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~ 92 (242)
T d1ulsa_ 21 TLELFAKEGARLVACDIEEG------PLREAA--EAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF 92 (242)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHH--HTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHH--HHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCc
Confidence 47899999999999999742 332221 34578899999999998887654 6799999998641
Q ss_pred ----------------hhhHHHHHH----HHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-----
Q 026978 71 ----------------FLDQLEIVH----AIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA----- 124 (230)
Q Consensus 71 ----------------~~~~~~ll~----Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~----- 124 (230)
+.+...+.+ .+++.+ -.+++. |+-+... . .....|..+|..++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~~~~---~--~~~~~Y~asKaal~~ltk~lA~el 166 (242)
T d1ulsa_ 93 HWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYLG---N--LGQANYAASMAGVVGLTRTLALEL 166 (242)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGGC---C--TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccccccC---C--CCCcchHHHHHHHHHHHHHHHHHH
Confidence 223333333 344444 344443 3322111 1 1234677899888876553
Q ss_pred --cCCCEEEEeccccc
Q 026978 125 --AQIPYTFVSANLCG 138 (230)
Q Consensus 125 --~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 167 a~~gIrVN~I~PG~v~ 182 (242)
T d1ulsa_ 167 GRWGIRVNTLAPGFIE 182 (242)
T ss_dssp GGGTEEEEEEEECSBC
T ss_pred hhhCcEEEEEeeCccc
Confidence 68999999999875
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=9.2e-06 Score=64.20 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.. +++.+..- ..++..+.+|++|.+++.++++ ++|++||+++...
T Consensus 22 ia~~la~~Ga~V~i~~r~~~------~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~ 94 (250)
T d1ydea1 22 IVRAFVNSGARVVICDKDES------GGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQ 94 (250)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHh-cCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEeccccccccc
Confidence 47889999999999999742 33333221 3578899999999988877655 6799999998531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ .++|. |..|..... ....|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~~~~-----~~~~Y~asKaal~~lt~~lA~ 167 (250)
T d1ydea1 95 RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQA-----QAVPYVATKGAVTAMTKALAL 167 (250)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHHCCT-----TCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCccccccccccccc-----CcchhHHHHhhHHHHHHHHHH
Confidence 122 233444455543 35553 333432111 124677899888776543
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 168 e~a~~gIrVN~I~PG~i~ 185 (250)
T d1ydea1 168 DESPYGVRVNCISPGNIW 185 (250)
T ss_dssp HHGGGTCEEEEEEECSBC
T ss_pred HhcccCeEEEEEeeCCCC
Confidence 68999999999874
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.27 E-value=1.8e-06 Score=68.40 Aligned_cols=133 Identities=11% Similarity=0.134 Sum_probs=84.9
Q ss_pred CHHHHhhCCCe-EEEEEcCCCCCCCcchHhhhhhhcCC--CeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHK-TFVYARPVTQNSRPSKLEIHKEFQGI--GVTIIEGELDEHKKIVSILK------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~-V~~l~R~~~~~~~p~k~~~l~~l~~~--gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~~- 70 (230)
++++|+++|+. |.++.|+..... . -.+.++.++.. .+.++.+|++|.+++.++++ +.|.|||+++...
T Consensus 25 ~a~~la~~Ga~~vvl~~R~~~~~~-~-~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~ 102 (259)
T d2fr1a1 25 IARWLARRGAPHLLLVSRSGPDAD-G-AGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDD 102 (259)
T ss_dssp HHHHHHHHTCSEEEEEESSGGGST-T-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCC
T ss_pred HHHHHHHCCCCEEEEEeCCccCHH-H-HHHHHHHHHhccccccccccccchHHHHHHhhccccccccccccccccccccc
Confidence 46889999984 777788643221 1 11122333333 47789999999999888766 3689999998752
Q ss_pred ------------------hhhHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHH---HHcCC
Q 026978 71 ------------------FLDQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAI---EAAQI 127 (230)
Q Consensus 71 ------------------~~~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l---~~~gl 127 (230)
+.+..++.++++..+ ..+||. |+ .|..... ....|..+|..++.+. +..|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~-----~~~~YaAaka~l~~la~~~~~~Gi 176 (259)
T d2fr1a1 103 GTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAP-----GLGGYAPGNAYLDGLAQQRRSDGL 176 (259)
T ss_dssp CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCT-----TCTTTHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCc-----ccHHHHHHHHhHHHHHHHHHhCCC
Confidence 345667777777766 677763 33 2221111 1224667887766544 44799
Q ss_pred CEEEEeccccchhh
Q 026978 128 PYTFVSANLCGAYF 141 (230)
Q Consensus 128 ~~tilr~g~~~~~~ 141 (230)
+++.|.||.+.+.+
T Consensus 177 ~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 177 PATAVAWGTWAGSG 190 (259)
T ss_dssp CCEEEEECCBC---
T ss_pred CEEECCCCcccCCc
Confidence 99999999987643
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.27 E-value=1.2e-05 Score=63.35 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=81.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.. +.+..+ ..+.+.+++|++|.+++.++++ ++|++||+++...
T Consensus 21 ia~~la~~G~~V~~~~~~~~------~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~ 91 (248)
T d2d1ya1 21 IAQAFAREGALVALCDLRPE------GKEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGS 91 (248)
T ss_dssp HHHHHHHTTCEEEEEESSTT------HHHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCC
Confidence 47889999999999999743 222222 2367889999999888776654 6899999998641
Q ss_pred ----------------hhhHHHH----HHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEI----VHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~l----l~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++ +..+++.+ -.++|. |..+.... .....|..+|..++.+.+.
T Consensus 92 ~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~-----~~~~~Y~asKaal~~ltk~lA~e 165 (248)
T d2d1ya1 92 ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE-----QENAAYNASKGGLVNLTRSLALD 165 (248)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC-----TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccc-----cccchhHHHHHHHHHHHHHHHHH
Confidence 2233334 44445555 456763 33332111 1234677899888876543
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 166 l~~~gIrVN~I~PG~v~ 182 (248)
T d2d1ya1 166 LAPLRIRVNAVAPGAIA 182 (248)
T ss_dssp HGGGTEEEEEEEECSBC
T ss_pred hhhhCcEEEEEeeCCCC
Confidence 68999999999875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.27 E-value=1.7e-05 Score=62.26 Aligned_cols=126 Identities=13% Similarity=0.150 Sum_probs=82.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
++++|+++|++|.+..|+.. +++.+.. +..+++.+.+|++|.++++++++ .+|++||+++...
T Consensus 23 ia~~la~~G~~V~~~~r~~~------~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~ 95 (244)
T d1pr9a_ 23 TVQALHATGARVVAVSRTQA------DLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEV 95 (244)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHcCCEEEEEECCHH------HHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccccccchhhh
Confidence 47889999999999999742 3322221 23578999999999999988887 5699999998751
Q ss_pred ------------hhhHHH----HHHHHH-HhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------
Q 026978 71 ------------FLDQLE----IVHAIK-VAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA------- 124 (230)
Q Consensus 71 ------------~~~~~~----ll~Aa~-~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~------- 124 (230)
+.+... ++.... +.+ -.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~el~~ 169 (244)
T d1pr9a_ 96 TKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-PGAIVNVSSQCSQRAV---T--NHSVYCSTKGALDMLTKVMALELGP 169 (244)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-CEEEEEECCGGGTSCC---T--TBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-cceEeecccccccccc---c--chhhhhhhHHHHHHHHHHHHHHhCC
Confidence 122333 333322 223 345553 33332211 1 123577899888876553
Q ss_pred cCCCEEEEeccccch
Q 026978 125 AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 170 ~gIrvN~I~PG~v~T 184 (244)
T d1pr9a_ 170 HKIRVNAVNPTVVMT 184 (244)
T ss_dssp GTEEEEEEEECCBCS
T ss_pred CcEEEEEEeeCcCcC
Confidence 689999999998754
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.26 E-value=5.1e-06 Score=65.74 Aligned_cols=131 Identities=15% Similarity=0.191 Sum_probs=82.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+..... +-.+.+..-....+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~i~~r~~~~~~--~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~ 98 (251)
T d1vl8a_ 21 IAQGLAEAGCSVVVASRNLEEAS--EAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP 98 (251)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 47899999999999999743210 00111111112357789999999988777654 6899999998641
Q ss_pred ----------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+. +.++..+++.+ -.++|. |.-+..... .....|..+|..++.+.+.
T Consensus 99 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~----~~~~~Y~asKaal~~lt~~lA~e 173 (251)
T d1vl8a_ 99 AEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM----PNISAYAASKGGVASLTKALAKE 173 (251)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS----SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccC----ccccchHHHHHhHHHHHHHHHHH
Confidence 2233 33444455555 456653 322221111 0124677899888776543
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 174 ~~~~gIrVN~I~PG~i~ 190 (251)
T d1vl8a_ 174 WGRYGIRVNVIAPGWYR 190 (251)
T ss_dssp HGGGTCEEEEEEECCBC
T ss_pred hcccCeEEEEEeeCccc
Confidence 68999999999875
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.26 E-value=1.3e-05 Score=62.83 Aligned_cols=119 Identities=15% Similarity=0.142 Sum_probs=82.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+... ...+..+.+|++|.+++.++++ +.|++||+++...
T Consensus 23 ia~~la~~Ga~V~~~~r~~~~--------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~ 88 (237)
T d1uzma1 23 IAQRLAADGHKVAVTHRGSGA--------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF 88 (237)
T ss_dssp HHHHHHHTTCEEEEEESSSCC--------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC---
T ss_pred HHHHHHHCCCEEEEEECCcch--------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeeccccccc
Confidence 478999999999999998542 1346678999999988876654 6799999998641
Q ss_pred ----------------hh----hHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FL----DQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~----~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+. ..+.++..+++.+ -.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 89 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~e 162 (237)
T d1uzma1 89 LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI---G--NQANYAASKAGVIGMARSIARE 162 (237)
T ss_dssp --CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCC---c--ccHHHHHHHHHHHHHHHHHHhh
Confidence 11 2344566667777 567763 33332211 1 124677899988876553
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 163 ~~~~gIrVN~I~PG~v~T 180 (237)
T d1uzma1 163 LSKANVTANVVAPGYIDT 180 (237)
T ss_dssp HGGGTEEEEEEEECSBCC
T ss_pred hhcCCceeeeeeeCcCCC
Confidence 689999999998753
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.23 E-value=5e-06 Score=65.77 Aligned_cols=126 Identities=13% Similarity=0.174 Sum_probs=84.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|+.. +++.+ +.++. ..+..+.+|++|.+++.++++ +.|++|++++...
T Consensus 26 ~a~~la~~Ga~V~~~~r~~~------~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~ 99 (251)
T d2c07a1 26 IAKMLAKSVSHVICISRTQK------SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITR 99 (251)
T ss_dssp HHHHHTTTSSEEEEEESSHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecccccc
Confidence 47889999999999999743 22211 12322 347889999999998887665 7899999998641
Q ss_pred -------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+ .+.++..+++.+ -.++|. |..|..... ....|..+|..++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~-----~~~~Y~asKaal~~ltr~l 173 (251)
T d2c07a1 100 DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV-----GQANYSSSKAGVIGFTKSL 173 (251)
T ss_dssp CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----TCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCC-----CCHHHHHHHHHHHHHHHHH
Confidence 122 344555566666 567773 444432111 124677899888876553
Q ss_pred ------cCCCEEEEeccccc
Q 026978 125 ------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 174 A~el~~~gIrVN~V~PG~v~ 193 (251)
T d2c07a1 174 AKELASRNITVNAIAPGFIS 193 (251)
T ss_dssp HHHHGGGTEEEEEEEECSBC
T ss_pred HHHhhhhCeEEEEEccCCEe
Confidence 68999999999875
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.22 E-value=1.9e-05 Score=62.03 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=78.5
Q ss_pred CHHHHhhCCC--eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGH--KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~--~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~ 69 (230)
++++|+++|+ .|.+..|+.. +++.+++....++.++.+|++|.+++.++++ +.|++|+++|..
T Consensus 19 ~a~~la~~G~~~~Vi~~~R~~~------~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~ 92 (250)
T d1yo6a1 19 LVQQLVKDKNIRHIIATARDVE------KATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL 92 (250)
T ss_dssp HHHHHHTCTTCCEEEEEESSGG------GCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEEEeCCHH------HHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCccc
Confidence 4788999996 5777788743 3334444445679999999999988776643 389999999863
Q ss_pred C--------------------hhhHHH----HHHHHHHhCCc-----------ceEec--ccccccCC--CCCCCCchhH
Q 026978 70 Q--------------------FLDQLE----IVHAIKVAGNI-----------KRFLP--SEFGCEED--KVRPLPPFEA 110 (230)
Q Consensus 70 ~--------------------~~~~~~----ll~Aa~~ag~V-----------kr~v~--S~~g~~~~--~~~~~~p~~~ 110 (230)
. +.+... ++...++.+ - .+++. +..+.... ......|...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~-~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~a 171 (250)
T d1yo6a1 93 LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAA-SKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA 171 (250)
T ss_dssp CCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHH-HSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHH
T ss_pred CCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-cCCCCccccceeccccccccccccccCCcccccchhHHH
Confidence 1 122333 333333332 1 12221 11221111 1111223446
Q ss_pred HHHHHHHHHHHHHH-------cCCCEEEEeccccc
Q 026978 111 YLEKKRIVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 111 ~~~~K~~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
|..+|..+..+.+. .|+....|.||+.-
T Consensus 172 Y~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 172 YRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 88999887765542 68999999999764
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.21 E-value=9.9e-06 Score=64.38 Aligned_cols=127 Identities=15% Similarity=0.179 Sum_probs=82.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|+... +++.+ +.++. ..+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 23 ia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~ 97 (261)
T d1geea_ 23 MAIRFATEKAKVVVNYRSKED-----EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcHH-----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecC
Confidence 478999999999999997421 22211 12222 346788999999988877665 6899999998751
Q ss_pred -------------------hhh----HHHHHHHHHHhCCcce-Eec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 -------------------FLD----QLEIVHAIKVAGNIKR-FLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~~----~~~ll~Aa~~ag~Vkr-~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+ .+.++..+++.+ -.+ +|. |+ .|.... + ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~ 171 (261)
T d1geea_ 98 PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND-IKGTVINMSSVHEKIPW---P--LFVHYAASKGGMKLMTET 171 (261)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCCEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHH
T ss_pred CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc-ccccccccccchhcccC---c--cccccccCCccchhhHHH
Confidence 122 344455566666 444 542 33 332111 1 123577899988876553
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 172 lA~e~~~~gIrVN~I~PG~v~ 192 (261)
T d1geea_ 172 LALEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp HHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHhhhhCcEEEEEeeCcCc
Confidence 68999999999875
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.20 E-value=2e-05 Score=62.26 Aligned_cols=126 Identities=13% Similarity=0.199 Sum_probs=81.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.. +++. .+++ ...+..+.+|++|++++.++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~ 93 (256)
T d1k2wa_ 21 FAEAYVREGARVAIADINLE------AARATAAEI-GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLA 93 (256)
T ss_dssp HHHHHHHTTEEEEEEESCHH------HHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeeccccccc
Confidence 47889999999999999742 3222 2233 3568889999999998887755 6799999999641
Q ss_pred -----------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+.++ ..+.+.-.++|. |+ .|.... + ....|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~ 168 (256)
T d1k2wa_ 94 PIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE---A--LVGVYCATKAAVISLTQSAGL 168 (256)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc---c--cccchhhhhhHHHHHHHHHHH
Confidence 2233344433 223321246663 33 332111 1 123566899888876653
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+.-
T Consensus 169 el~~~gIrVN~V~PG~i~ 186 (256)
T d1k2wa_ 169 NLIRHGINVNAIAPGVVD 186 (256)
T ss_dssp HHGGGTEEEEEEEECCBC
T ss_pred HhcccCeEEEEEecCCCC
Confidence 68999999999764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.17 E-value=1.4e-05 Score=63.14 Aligned_cols=127 Identities=12% Similarity=0.156 Sum_probs=81.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|+.. +++.+ +++.. ..+..+.+|++|.+++.++++ ++|++||++|...
T Consensus 17 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~ 90 (255)
T d1gega_ 17 IALRLVKDGFAVAIADYNDA------TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP 90 (255)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccc
Confidence 47889999999999999743 22221 12322 346788999999988877654 6899999998641
Q ss_pred -------------------hhhHHHHHHH----HHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FLDQLEIVHA----IKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~A----a~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+.+...+.++ +++.+.-.+++. |+ .|.... + ....|..+|..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~ltk~l 165 (255)
T d1gega_ 91 STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---P--ELAVYSSSKFAVRGLTQTA 165 (255)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---T--TBHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC---c--ccccchhCHHHHHhhHHHH
Confidence 2234444443 344442344553 33 332111 1 123567899888876553
Q ss_pred ------cCCCEEEEeccccc
Q 026978 125 ------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 166 A~el~~~gIrVN~I~PG~i~ 185 (255)
T d1gega_ 166 ARDLAPLGITVNGYCPGIVK 185 (255)
T ss_dssp HHHHGGGTEEEEEEEECSBS
T ss_pred HHHhhhhCcEEEEEecCccc
Confidence 68999999999874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.16 E-value=1.3e-05 Score=63.50 Aligned_cols=126 Identities=11% Similarity=0.068 Sum_probs=81.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hh----cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EF----QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l----~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
++++|+++|++|.+..|+.. +.+... .+ ....+..+.+|++|++++.++++ ++|++|+++|.
T Consensus 20 ia~~la~~Ga~V~i~~r~~~------~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~ 93 (258)
T d1iy8a_ 20 TAVRLAAEGAKLSLVDVSSE------GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI 93 (258)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 47889999999999999743 222111 11 12356788999999998877654 68999999985
Q ss_pred CC--------------------hhhHHH----HHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 69 PQ--------------------FLDQLE----IVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 69 ~~--------------------~~~~~~----ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
.. +.+... ++..+++.+ -.++|. |..+.... + ....|..+|..+..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~lt 167 (258)
T d1iy8a_ 94 EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI---G--NQSGYAAAKHGVVGLT 167 (258)
T ss_dssp CCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC---S--SBHHHHHHHHHHHHHH
T ss_pred cccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCC---C--CchHHHHHHHHHHHHH
Confidence 31 123333 344445555 456663 33332211 1 1246778998887655
Q ss_pred HH-------cCCCEEEEeccccc
Q 026978 123 EA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 123 ~~-------~gl~~tilr~g~~~ 138 (230)
+. .|+....|.||++.
T Consensus 168 ~~lA~el~~~gIrVN~i~PG~v~ 190 (258)
T d1iy8a_ 168 RNSAVEYGRYGIRINAIAPGAIW 190 (258)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHhCccCceEEEEeeCccc
Confidence 43 68999999999874
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.16 E-value=6.5e-06 Score=64.87 Aligned_cols=125 Identities=15% Similarity=0.153 Sum_probs=82.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+.+|+.. +++.+. ++. ...+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 23 ia~~la~~G~~V~l~~r~~~------~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~ 96 (244)
T d1yb1a_ 23 TAYEFAKLKSKLVLWDINKH------GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY 96 (244)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccc
Confidence 47889999999999999743 322211 122 2457889999999998887654 6899999999751
Q ss_pred -------------------hh----hHHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchh-HHHHHHHHHHHHHHH
Q 026978 71 -------------------FL----DQLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFE-AYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 -------------------~~----~~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~-~~~~~K~~~e~~l~~ 124 (230)
+. ..+.++..+++.+ -.++|. |+ .|... .|.. .|..+|..+..+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~------~~~~~~Y~asKaal~~~~~~ 169 (244)
T d1yb1a_ 97 TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS------VPFLLAYCSSKFAAVGFHKT 169 (244)
T ss_dssp CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC------HHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCC------CCCcHHHHHHHHHHHHHHHH
Confidence 11 2344555666666 567763 33 33211 1333 466899887765542
Q ss_pred ----------cCCCEEEEeccccc
Q 026978 125 ----------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----------~gl~~tilr~g~~~ 138 (230)
.|+..+.|.||+..
T Consensus 170 La~El~~~~~~gI~V~~i~PG~v~ 193 (244)
T d1yb1a_ 170 LTDELAALQITGVKTTCLCPNFVN 193 (244)
T ss_dssp HHHHHHHTTCTTEEEEEEEETHHH
T ss_pred HHHHHHhhcCCCEEEEEEEcCCCC
Confidence 37889999998653
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=1.6e-05 Score=62.87 Aligned_cols=126 Identities=9% Similarity=0.097 Sum_probs=81.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.+..|+.. +++.+ ++++. ..+..+.+|++|++++.++++ ++|++||+++...
T Consensus 27 ia~~la~~Ga~V~~~~r~~~------~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~ 100 (255)
T d1fmca_ 27 IAITFATAGASVVVSDINAD------AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHHHTTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCC
Confidence 46889999999999999742 22221 12322 357889999999988776544 6899999998641
Q ss_pred ------------------hhh----HHHHHHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLD----QLEIVHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+ .+.++...++.+ -.++|. |+ .+.... + ....|..+|..++.+.+.
T Consensus 101 ~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA 174 (255)
T d1fmca_ 101 PKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN---I--NMTSYASSKAAASHLVRNMA 174 (255)
T ss_dssp CCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC---T--TCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccc---c--ccccchhHHHHHHHHHHHHH
Confidence 122 334445555555 356553 33 332211 1 124677899888776553
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 175 ~el~~~gIrVN~I~PG~i~ 193 (255)
T d1fmca_ 175 FDLGEKNIRVNGIAPGAIL 193 (255)
T ss_dssp HHHHTTTEEEEEEEECSBC
T ss_pred HHhCccCeEEEEeeeCcCc
Confidence 68999999999874
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.13 E-value=2.4e-05 Score=62.07 Aligned_cols=126 Identities=13% Similarity=0.099 Sum_probs=79.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc-----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ-----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~-----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|.+..|+.. +++.+ +++. ..++..+.+|++|.+++.++++ ++|++||+++
T Consensus 21 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG 94 (264)
T d1spxa_ 21 TAVLFAREGAKVTITGRHAE------RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAG 94 (264)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccc
Confidence 47899999999999999743 22211 1221 2348899999999988887665 6899999998
Q ss_pred CCC-----------------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCch-hHHHHHHHHH
Q 026978 68 YPQ-----------------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIV 118 (230)
Q Consensus 68 ~~~-----------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~ 118 (230)
... +.+ .+.++..+++.+ -..++. |..+... . .|. ..|..+|..+
T Consensus 95 ~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~--~---~~~~~~Y~asKaal 168 (264)
T d1spxa_ 95 AAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--A---TPDFPYYSIAKAAI 168 (264)
T ss_dssp -------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS--C---CTTSHHHHHHHHHH
T ss_pred cccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccccc--c---CCCchhhhhhhhhH
Confidence 530 112 233444444544 244443 3332111 1 122 3466899888
Q ss_pred HHHHHH-------cCCCEEEEeccccc
Q 026978 119 RRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~ 138 (230)
+.+.+. .|+....|.||++.
T Consensus 169 ~~lt~~lA~el~~~gIrVN~V~PG~v~ 195 (264)
T d1spxa_ 169 DQYTRNTAIDLIQHGIRVNSISPGLVA 195 (264)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 766553 68999999999874
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.12 E-value=2.4e-05 Score=60.97 Aligned_cols=122 Identities=16% Similarity=0.235 Sum_probs=81.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCC-HHHHHHHhcCCCEEEEcCCCCC---------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDE-HKKIVSILKEVDVVISTVAYPQ--------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d-~~~L~~al~g~D~Vi~~~~~~~--------- 70 (230)
++++|+++|++|.+..|+. ++ ++..+.+++.+|+++ .+.+.+.+..+|++||+++...
T Consensus 20 ia~~l~~~Ga~V~~~~r~~------~~------l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~ 87 (234)
T d1o5ia_ 20 VADVLSQEGAEVTICARNE------EL------LKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTN 87 (234)
T ss_dssp HHHHHHHTTCEEEEEESCH------HH------HHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCH
T ss_pred HHHHHHHCCCEEEEEECCH------HH------HHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcchhhhhh
Confidence 4788999999999999963 22 234577889999976 5677778889999999998641
Q ss_pred ----------hh----hHHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------cCCC
Q 026978 71 ----------FL----DQLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------AQIP 128 (230)
Q Consensus 71 ----------~~----~~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~gl~ 128 (230)
+. ..+.++..+++.+ -.++|. ++..... +......|..+|..++.+.+. .|+.
T Consensus 88 ~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~----~~~~~~~Y~asKaal~~ltk~lA~ela~~gIr 162 (234)
T d1o5ia_ 88 EDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS----PIENLYTSNSARMALTGFLKTLSFEVAPYGIT 162 (234)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred HHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccc----cccccccchhHHHHHHHHHHHHHHHhcccCeE
Confidence 11 2344555566666 456653 3222111 111224566889888765543 6899
Q ss_pred EEEEeccccch
Q 026978 129 YTFVSANLCGA 139 (230)
Q Consensus 129 ~tilr~g~~~~ 139 (230)
...|.||+...
T Consensus 163 VN~I~PG~v~T 173 (234)
T d1o5ia_ 163 VNCVAPGWTET 173 (234)
T ss_dssp EEEEEECSBCC
T ss_pred EeecccCccch
Confidence 99999998753
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.11 E-value=1.2e-05 Score=63.14 Aligned_cols=127 Identities=14% Similarity=0.153 Sum_probs=82.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..++.. ++++.+. .++ ...+..+.+|++|.+++.++++ +.|++||+++...
T Consensus 17 ~a~~la~~Ga~V~i~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~ 91 (244)
T d1edoa_ 17 IALSLGKAGCKVLVNYARSA-----KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITR 91 (244)
T ss_dssp HHHHHHHTTCEEEEEESSCH-----HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCcccccccccc
Confidence 46889999999988765431 1222221 121 2357789999999998877655 6799999998641
Q ss_pred -------------------hh----hHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 026978 71 -------------------FL----DQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA- 124 (230)
Q Consensus 71 -------------------~~----~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~- 124 (230)
+. ..+.++..+++.+ -.++|. |..|..... ....|..+|..++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~-----~~~~Y~asKaal~~ltk~l 165 (244)
T d1edoa_ 92 DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI-----GQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----TCHHHHHHHHHHHHHHHHH
T ss_pred ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCC-----CCHHHHHHHHHHHHChHHH
Confidence 12 2344555566665 467763 334432111 124677899888776553
Q ss_pred ------cCCCEEEEeccccc
Q 026978 125 ------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ------~gl~~tilr~g~~~ 138 (230)
.|+....|.||++-
T Consensus 166 A~el~~~gIrvN~I~PG~i~ 185 (244)
T d1edoa_ 166 AREGASRNINVNVVCPGFIA 185 (244)
T ss_dssp HHHHHTTTEEEEEEEECSBC
T ss_pred HHHHhhhCcEEEEEecceec
Confidence 68999999999874
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.10 E-value=4.9e-05 Score=59.54 Aligned_cols=130 Identities=17% Similarity=0.196 Sum_probs=77.7
Q ss_pred HHHHh---hCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---------CCCEEEEcCCCC
Q 026978 2 VKASV---SSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---------EVDVVISTVAYP 69 (230)
Q Consensus 2 v~~Ll---~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---------g~D~Vi~~~~~~ 69 (230)
+++|+ ++|+.|.+..|+.... +..+.+.. ...++.++.+|++|.+++.++++ .+|++|++++..
T Consensus 19 a~~l~~~a~~g~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~ 94 (248)
T d1snya_ 19 VKALLNLPQPPQHLFTTCRNREQA---KELEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIA 94 (248)
T ss_dssp HHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCC
T ss_pred HHHHHHHHhCCCEEEEEECCHHHH---HHHHHHHh-cCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeecccc
Confidence 56676 4789999999986543 12221111 24579999999999887765533 479999999863
Q ss_pred C--------------------hhhHHH----HHHHHHHh-----------CCcceEe--cccccccCCCCCCCCchhHHH
Q 026978 70 Q--------------------FLDQLE----IVHAIKVA-----------GNIKRFL--PSEFGCEEDKVRPLPPFEAYL 112 (230)
Q Consensus 70 ~--------------------~~~~~~----ll~Aa~~a-----------g~Vkr~v--~S~~g~~~~~~~~~~p~~~~~ 112 (230)
. +.+... ++..+++. + -.++| .|..|....... .....|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~g~~~~~~~--~~~~~Y~ 171 (248)
T d1snya_ 95 PKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSILGSIQGNTD--GGMYAYR 171 (248)
T ss_dssp CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGGGCSTTCCS--CCCHHHH
T ss_pred ccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-ccccccccccccccCCCCC--CChHHHH
Confidence 1 112222 33333332 2 23444 244443221111 1124677
Q ss_pred HHHHHHHHHHH-------HcCCCEEEEeccccc
Q 026978 113 EKKRIVRRAIE-------AAQIPYTFVSANLCG 138 (230)
Q Consensus 113 ~~K~~~e~~l~-------~~gl~~tilr~g~~~ 138 (230)
.+|..+..+.+ ..|+....|.||+.-
T Consensus 172 aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 172 TSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 89988776544 268999999999764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.08 E-value=4.2e-05 Score=60.72 Aligned_cols=126 Identities=11% Similarity=0.094 Sum_probs=80.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|.+..|+.. +++. .+++. ...+.++.+|++|.+++.++++ .+|++|++++...
T Consensus 22 ia~~la~~Ga~V~i~~r~~~------~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~ 95 (268)
T d2bgka1 22 TAKLFVRYGAKVVIADIADD------HGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST 95 (268)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCS
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccC
Confidence 47889999999999999743 2222 12332 2357789999999998887765 6899999998531
Q ss_pred --------------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCch-hHHHHHHHHHHHHHH
Q 026978 71 --------------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPF-EAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 --------------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~-~~~~~~K~~~e~~l~ 123 (230)
+.+. +.++..+++.+ -.++|. |..+..... +. ..|..+|..++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~-----~~~~~Y~asKaal~~lt~ 169 (268)
T d2bgka1 96 TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE-----GVSHVYTATKHAVLGLTT 169 (268)
T ss_dssp SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT-----TSCHHHHHHHHHHHHHHH
T ss_pred CCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccccc-----ccccccchhHHHHHhCHH
Confidence 1222 33444444454 345542 333321111 12 245678988887665
Q ss_pred H-------cCCCEEEEeccccc
Q 026978 124 A-------AQIPYTFVSANLCG 138 (230)
Q Consensus 124 ~-------~gl~~tilr~g~~~ 138 (230)
. .|+....|.||++.
T Consensus 170 ~lA~el~~~gIrVN~I~PG~i~ 191 (268)
T d2bgka1 170 SLCTELGEYGIRVNCVSPYIVA 191 (268)
T ss_dssp HHHHHHGGGTEEEEEEEESCCS
T ss_pred HHHHHhChhCeEEEecCCCCcc
Confidence 3 68999999999864
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.08 E-value=1.6e-05 Score=62.99 Aligned_cols=127 Identities=13% Similarity=0.180 Sum_probs=82.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
+++.|+++|++|.+..|+.. +++.+ +.++. ..+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 21 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~ 94 (260)
T d1zema1 21 TALRLAEEGTAIALLDMNRE------ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQG 94 (260)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhcccc
Confidence 47889999999999999743 22221 12332 347789999999888776654 6899999998531
Q ss_pred --------------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 71 --------------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 71 --------------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
+.+. +.++..+++.+ -.++|. |..|.... + ....|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~---~--~~~~Y~asKaal~~ltk~ 168 (260)
T d1zema1 95 AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP---P--NMAAYGTSKGAIIALTET 168 (260)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC---T--TBHHHHHHHHHHHHHHHH
T ss_pred ccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCC---c--chHHHHHHHHHHHHHHHH
Confidence 1223 33344445554 456663 33333211 1 123677899888876653
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 169 lA~el~~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 169 AALDLAPYNIRVNAISPGYMGP 190 (260)
T ss_dssp HHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHhhhhCCEEEEeccCcccC
Confidence 689999999998753
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.08 E-value=3.8e-05 Score=60.09 Aligned_cols=126 Identities=10% Similarity=0.061 Sum_probs=81.2
Q ss_pred CHHHHhhCCCe-------EEEEEcCCCCCCCcchHhhh-hhhcCC--CeEEEEecCCCHHHHHHHhc-------CCCEEE
Q 026978 1 MVKASVSSGHK-------TFVYARPVTQNSRPSKLEIH-KEFQGI--GVTIIEGELDEHKKIVSILK-------EVDVVI 63 (230)
Q Consensus 1 lv~~Ll~~g~~-------V~~l~R~~~~~~~p~k~~~l-~~l~~~--gv~vv~gD~~d~~~L~~al~-------g~D~Vi 63 (230)
++++|+++|++ |.+..|+.. +++.+ ++++.. .+..+.+|++|.+++.++++ ++|++|
T Consensus 17 ia~~la~~G~~~~~~~~~v~~~~r~~~------~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilv 90 (240)
T d2bd0a1 17 IALEFARAARHHPDFEPVLVLSSRTAA------DLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLV 90 (240)
T ss_dssp HHHHHHHHTTTCTTCCEEEEEEESCHH------HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHhCccccccCcEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceee
Confidence 46789999987 777888642 22222 123333 36678999999998877654 679999
Q ss_pred EcCCCCC-------------------hh----hHHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHH
Q 026978 64 STVAYPQ-------------------FL----DQLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIV 118 (230)
Q Consensus 64 ~~~~~~~-------------------~~----~~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~ 118 (230)
|+++... +. ..+.++..+++.+ -.++|. |..|.... + ....|..+|..+
T Consensus 91 nnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---~--~~~~Y~asK~al 164 (240)
T d2bd0a1 91 NNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF---R--HSSIYCMSKFGQ 164 (240)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---T--TCHHHHHHHHHH
T ss_pred cccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCC---C--CChHHHHHHHHH
Confidence 9998741 12 2445566666665 456663 33332211 1 124677899887
Q ss_pred HHHHHH-------cCCCEEEEeccccc
Q 026978 119 RRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~ 138 (230)
+.+.+. .|+....|.||+..
T Consensus 165 ~~lt~~la~el~~~gIrvn~i~PG~v~ 191 (240)
T d2bd0a1 165 RGLVETMRLYARKCNVRITDVQPGAVY 191 (240)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHhCcCCeEEEEeeeCccc
Confidence 765543 68999999999864
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.08 E-value=4.3e-05 Score=60.19 Aligned_cols=126 Identities=14% Similarity=0.148 Sum_probs=80.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc-CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ-GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~-~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|.+..|+.. +++.+. .+. ...+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 22 ia~~la~~Ga~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~ 95 (251)
T d1zk4a1 22 IATKFVEEGAKVMITGRHSD------VGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN 95 (251)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccc
Confidence 47889999999999999742 222221 222 2468899999999988776655 6799999998741
Q ss_pred ------------------hhhHHHHHHH----HHHhCCcc-eEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH--
Q 026978 71 ------------------FLDQLEIVHA----IKVAGNIK-RFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE-- 123 (230)
Q Consensus 71 ------------------~~~~~~ll~A----a~~ag~Vk-r~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-- 123 (230)
+.+...+.++ +++.+ -. ++|. |..|.... + ....|..+|..+..+.+
T Consensus 96 ~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~gg~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~l 169 (251)
T d1zk4a1 96 KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGD---P--SLGAYNASKGAVRIMSKSA 169 (251)
T ss_dssp CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHH
T ss_pred cchhcccccchhhhccccccccchhHHHHHHHHHhcC-CCCceEeeeccceeccC---C--CchhHHHHHHHHhcchHHH
Confidence 2234444444 44444 33 5552 33343211 1 12356688877664332
Q ss_pred -------HcCCCEEEEeccccc
Q 026978 124 -------AAQIPYTFVSANLCG 138 (230)
Q Consensus 124 -------~~gl~~tilr~g~~~ 138 (230)
..|+....|.||+..
T Consensus 170 A~e~~l~~~gIrVN~I~PG~i~ 191 (251)
T d1zk4a1 170 ALDCALKDYDVRVNTVHPGYIK 191 (251)
T ss_dssp HHHHHHTTCSEEEEEEEECCBC
T ss_pred HHHHhcCCCcEEEEEEeCCCCC
Confidence 357899999999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=7.5e-05 Score=58.52 Aligned_cols=125 Identities=14% Similarity=0.088 Sum_probs=83.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc---CCCEEEEcCCCCC-------
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK---EVDVVISTVAYPQ------- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~---g~D~Vi~~~~~~~------- 70 (230)
+++.|+++|++|.+..|+. ++++.+. +..+++....|+.+.+......+ +.|++||+++...
T Consensus 22 ia~~la~~G~~Vi~~~r~~------~~l~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~ 93 (245)
T d2ag5a1 22 AALAFAREGAKVIATDINE------SKLQELE--KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDC 93 (245)
T ss_dssp HHHHHHHTTCEEEEEESCH------HHHGGGG--GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGC
T ss_pred HHHHHHHcCCEEEEEeCCH------HHHHHHH--hccCCceeeeeccccccccccccccccceeEEecccccCCCChhhC
Confidence 4788999999999999973 2333332 34689999999988776665544 7899999998752
Q ss_pred ------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH-------c
Q 026978 71 ------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-------A 125 (230)
Q Consensus 71 ------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-------~ 125 (230)
+.+. +.++...++.+ -.++|. |..+... +......|..+|..++.+.+. .
T Consensus 94 ~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~----~~~~~~~Y~~sKaal~~l~r~lA~e~~~~ 168 (245)
T d2ag5a1 94 EEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVK----GVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168 (245)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTB----CCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccC----CccchhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1222 33344445555 456653 3344211 111234677899998887664 6
Q ss_pred CCCEEEEeccccc
Q 026978 126 QIPYTFVSANLCG 138 (230)
Q Consensus 126 gl~~tilr~g~~~ 138 (230)
|+....|.||+.-
T Consensus 169 gIrvN~I~PG~i~ 181 (245)
T d2ag5a1 169 GIRCNCVCPGTVD 181 (245)
T ss_dssp TEEEEEEEESCEE
T ss_pred CcEEEEEeeceee
Confidence 8999999999764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.04 E-value=5.5e-05 Score=60.27 Aligned_cols=127 Identities=11% Similarity=0.106 Sum_probs=80.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhc-----CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQ-----GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~-----~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|.+..|+.. +++.+. ++. ...+..+.+|++|.+++.++++ .+|++|++++
T Consensus 20 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG 93 (274)
T d1xhla_ 20 AAVIFAKEGAQVTITGRNED------RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAG 93 (274)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecc
Confidence 47899999999999999743 222211 221 1347889999999988777654 6799999988
Q ss_pred CCC---------------------hhh----HHHHHHHHHHhCCcceEec-ccccccCCCCCCCCchhHHHHHHHHHHHH
Q 026978 68 YPQ---------------------FLD----QLEIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPFEAYLEKKRIVRRA 121 (230)
Q Consensus 68 ~~~---------------------~~~----~~~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~~~~~~~K~~~e~~ 121 (230)
... +.+ .+.++..+++.+ -.+++. |+.+.... .+ ....|..+|..++.+
T Consensus 94 ~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~--~~--~~~~Y~asKaal~~l 168 (274)
T d1xhla_ 94 ANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--HS--GYPYYACAKAALDQY 168 (274)
T ss_dssp CCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--CT--TSHHHHHHHHHHHHH
T ss_pred cccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcccc--CC--CCceehhhhhHHHHH
Confidence 530 112 233444445554 355554 33221111 11 123566899888776
Q ss_pred HHH-------cCCCEEEEeccccc
Q 026978 122 IEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 122 l~~-------~gl~~tilr~g~~~ 138 (230)
.+. .|+....|.||+..
T Consensus 169 tk~lA~ela~~gIrVN~I~PG~i~ 192 (274)
T d1xhla_ 169 TRCTAIDLIQHGVRVNSVSPGAVA 192 (274)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHhHhCCceeeeccCCCc
Confidence 553 68999999999874
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.03 E-value=3e-05 Score=61.36 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc--------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK--------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~--------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+.. +++. .+++.. ..+..+.+|++|.+++.++++ .+|++||+++..
T Consensus 24 ia~~la~~Ga~V~~~~r~~~------~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~ 97 (259)
T d2ae2a_ 24 IVEELASLGASVYTCSRNQK------ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV 97 (259)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCcee
Confidence 47889999999999999742 2221 222322 346788999999888776543 379999999864
Q ss_pred C-------------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+. +.++..+++.+ -.++|. |..|.... + ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~ 171 (259)
T d2ae2a_ 98 IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV---P--YEAVYGATKGAMDQLTRC 171 (259)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHH
T ss_pred ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccccc---c--cccchHHHHHHHHHHHHH
Confidence 1 1233 33344455555 456663 43442211 1 123567899888876653
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 172 lA~el~~~gIrVN~I~PG~i~ 192 (259)
T d2ae2a_ 172 LAFEWAKDNIRVNGVGPGVIA 192 (259)
T ss_dssp HHHHTGGGTEEEEEEEECSBC
T ss_pred HHHHhCcCceEEEEeeeCccc
Confidence 58999999999874
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.01 E-value=2.6e-05 Score=61.74 Aligned_cols=127 Identities=15% Similarity=0.124 Sum_probs=79.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------C-CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------E-VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g-~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+.. +++. .+.+. ...+..+.+|++|.+++.++++ | +|++|++++..
T Consensus 24 iA~~la~~Ga~V~~~~r~~~------~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~ 97 (259)
T d1xq1a_ 24 IVEEFAGFGAVIHTCARNEY------ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI 97 (259)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCccccccccccc
Confidence 47889999999999999743 2221 11222 2357889999999888766543 4 79999999864
Q ss_pred C-------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+ .+.++..+++.+ -.++|. |..|..... ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~-----~~~~Y~asKaal~~lt~~ 171 (259)
T d1xq1a_ 98 RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS-----VGSIYSATKGALNQLARN 171 (259)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC---------------CCHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc-----ccccccccccchhhhhHH
Confidence 1 223 334444556665 567763 333322111 123677899888876553
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||++.-
T Consensus 172 lA~e~~~~gIrVN~V~PG~i~T 193 (259)
T d1xq1a_ 172 LACEWASDGIRANAVAPAVIAT 193 (259)
T ss_dssp HHHHHGGGTCEEEEEECCSCC-
T ss_pred HHHHhcccCeEEEEeccCcccC
Confidence 689999999998753
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.99 E-value=3.5e-05 Score=60.96 Aligned_cols=136 Identities=10% Similarity=0.069 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+..... +..+.+..-....+..+.+|++|++++.++++ ++|++||+++...
T Consensus 25 ia~~la~~Ga~V~i~~r~~~~~~--~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~ 102 (260)
T d1h5qa_ 25 FTRAVAAAGANVAVIYRSAADAV--EVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP 102 (260)
T ss_dssp HHHHHHHTTEEEEEEESSCTTHH--HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCC
Confidence 47899999999999999865321 11111111113467889999999998877764 6799999998641
Q ss_pred ----------------hhhH----HHHHHHHHHhCCcceEec-cc-ccccCCC--CCCCCchhHHHHHHHHHHHHHHH--
Q 026978 71 ----------------FLDQ----LEIVHAIKVAGNIKRFLP-SE-FGCEEDK--VRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 71 ----------------~~~~----~~ll~Aa~~ag~Vkr~v~-S~-~g~~~~~--~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
+.+. +.++..+.+.+.-.+++. ++ .+..... .........|..+|..++.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA 182 (260)
T d1h5qa_ 103 ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 182 (260)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHH
Confidence 1223 333444443431234432 22 1111100 00001123577899888776543
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 183 ~el~~~gIrvN~I~PG~i~ 201 (260)
T d1h5qa_ 183 AEWASAGIRVNALSPGYVN 201 (260)
T ss_dssp HHHGGGTEEEEEEEECSBC
T ss_pred HHhchhCeEEeecCCCccc
Confidence 68999999999875
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.97 E-value=8.6e-05 Score=59.03 Aligned_cols=126 Identities=12% Similarity=0.094 Sum_probs=79.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcC-----CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQG-----IGVTIIEGELDEHKKIVSILK-------EVDVVISTVA 67 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~-----~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~ 67 (230)
++++|+++|++|.+..|+.. +++.+. .+.. ..+..+.+|++|.+++.++++ ++|++||+++
T Consensus 21 ia~~la~~Ga~V~l~~r~~~------~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG 94 (272)
T d1xkqa_ 21 TAILFAQEGANVTITGRSSE------RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG 94 (272)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCc
Confidence 47899999999999999743 222211 2222 247889999999988877655 6899999988
Q ss_pred CCC-----------------------hhhHH----HHHHHHHHhCCcceEec-ccccccCCCCCCCCch-hHHHHHHHHH
Q 026978 68 YPQ-----------------------FLDQL----EIVHAIKVAGNIKRFLP-SEFGCEEDKVRPLPPF-EAYLEKKRIV 118 (230)
Q Consensus 68 ~~~-----------------------~~~~~----~ll~Aa~~ag~Vkr~v~-S~~g~~~~~~~~~~p~-~~~~~~K~~~ 118 (230)
... +.+.. .++..+++.+ -..++. |+.+.... .|. ..|..+|..+
T Consensus 95 ~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~-----~~~~~~Y~asKaal 168 (272)
T d1xkqa_ 95 AAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA-----QPDFLYYAIAKAAL 168 (272)
T ss_dssp CCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-----CCSSHHHHHHHHHH
T ss_pred ccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccC-----CCCcchhhhHHHHH
Confidence 631 11222 3333444443 244443 33322111 122 3566899888
Q ss_pred HHHHHH-------cCCCEEEEeccccc
Q 026978 119 RRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 119 e~~l~~-------~gl~~tilr~g~~~ 138 (230)
..+.+. .|+....|.||+.-
T Consensus 169 ~~ltk~lA~el~~~gIrVN~I~PG~i~ 195 (272)
T d1xkqa_ 169 DQYTRSTAIDLAKFGIRVNSVSPGMVE 195 (272)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence 766543 68999999999874
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.97 E-value=1.2e-05 Score=63.73 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhcC--CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~~--~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
++++|+++|++|.+..|+... +.+. .+.+.. ..+..+.+|++|.+++.+.++ +.|++||+++...
T Consensus 22 ia~~la~~G~~Vvi~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~ 96 (259)
T d1ja9a_ 22 IAIELGRRGASVVVNYGSSSK-----AAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV 96 (259)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCC
T ss_pred HHHHHHHcCCEEEEEcCCChH-----HHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEecccccc
Confidence 468899999999987775432 1111 112222 357789999999888887665 6799999999752
Q ss_pred -------------------hhhHHHHHHHHHH----hCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -------------------FLDQLEIVHAIKV----AGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~----ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+++++.. .| --.++.|..+... ..+ ....|..+|..++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g-~~iii~s~~~~~~--~~~--~~~~Y~asK~al~~l~r~lA~ 171 (259)
T d1ja9a_ 97 WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG-RIILTSSIAAVMT--GIP--NHALYAGSKAAVEGFCRAFAV 171 (259)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE-EEEEECCGGGTCC--SCC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC-ccccccccccccc--CCC--CchhHHHHHHHHHHHHHHHHH
Confidence 1233444444433 22 1113334433221 111 123566899888776653
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 172 e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 172 DCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp HHGGGTCEEEEEEECCBS
T ss_pred HHhhcCeEEeccCcCCcc
Confidence 58999999999875
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.96 E-value=4e-05 Score=60.45 Aligned_cols=124 Identities=13% Similarity=0.096 Sum_probs=79.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.. +.+.+ +++ ...+..+.+|++|.+++.++++ +.|++|++++...
T Consensus 22 ia~~la~~Ga~V~~~~~~~~------~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~ 94 (253)
T d1hxha_ 22 VVKLLLGEGAKVAFSDINEA------AGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG 94 (253)
T ss_dssp HHHHHHHTTCEEEEECSCHH------HHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCB
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCC
Confidence 47889999999999998642 22222 233 3457789999999888776655 6799999998641
Q ss_pred -----------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+. +.++..+++.+ .++|. |..|.... .....|..+|..++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~ 167 (253)
T d1hxha_ 95 DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI-----EQYAGYSASKAAVSALTRAAAL 167 (253)
T ss_dssp CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC-----TTBHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CceecccchhhhcCc-----cccccccchhHHHHHHHHHHHH
Confidence 1223 33344444444 45653 33342211 1224677899887765442
Q ss_pred ----c--CCCEEEEeccccc
Q 026978 125 ----A--QIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~--gl~~tilr~g~~~ 138 (230)
. ++....|.||++.
T Consensus 168 e~~~~g~~IrVN~I~PG~i~ 187 (253)
T d1hxha_ 168 SCRKQGYAIRVNSIHPDGIY 187 (253)
T ss_dssp HHHHHTCCEEEEEEEESEEC
T ss_pred HHhhcCCCEEEEEEeECCCc
Confidence 2 4788889999875
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=6.1e-05 Score=60.82 Aligned_cols=131 Identities=10% Similarity=0.082 Sum_probs=80.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-h---cCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-F---QGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l---~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+..... +-++.+.. + ....+..+.+|++|.+++.++++ +.|++||+++..
T Consensus 28 ia~~la~~Ga~Vvi~~r~~~~l~--~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~ 105 (297)
T d1yxma1 28 IVKELLELGSNVVIASRKLERLK--SAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ 105 (297)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeecccc
Confidence 47899999999999999743210 00111111 1 12357789999999998877654 689999999864
Q ss_pred C-------------------hhhHHHHHHHH----HHhCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHH--
Q 026978 70 Q-------------------FLDQLEIVHAI----KVAGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA-- 124 (230)
Q Consensus 70 ~-------------------~~~~~~ll~Aa----~~ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~-- 124 (230)
. +.+...+.+++ ++.+ -.++|.++-+.. ...+ ....|..+|..++.+.+.
T Consensus 106 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~--~~~~--~~~~Y~asKaal~~ltk~lA 180 (297)
T d1yxma1 106 FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK--AGFP--LAVHSGAARAGVYNLTKSLA 180 (297)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT--TCCT--TCHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccc--cccc--ccccchhHHHHHHHHHHHHH
Confidence 1 22344444443 3444 345553211111 1111 123566899988876653
Q ss_pred -----cCCCEEEEeccccc
Q 026978 125 -----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -----~gl~~tilr~g~~~ 138 (230)
.|+....|.||++.
T Consensus 181 ~el~~~gIrVN~I~PG~i~ 199 (297)
T d1yxma1 181 LEWACSGIRINCVAPGVIY 199 (297)
T ss_dssp HHTGGGTEEEEEEEECSBC
T ss_pred HHhcccCceEEEeeeCcCc
Confidence 68999999999875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=2e-05 Score=62.17 Aligned_cols=131 Identities=8% Similarity=0.106 Sum_probs=79.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
+++.|+++|++|.+..|+..... +..+.+. ......+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 19 ia~~la~~Ga~V~i~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~~ 96 (254)
T d2gdza1 19 FAEALLLKGAKVALVDWNLEAGV--QCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK 96 (254)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSS
T ss_pred HHHHHHHCCCEEEEEECCHHHHH--HHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccccc
Confidence 46889999999999999743210 0011111 1112357889999999988887664 6899999999763
Q ss_pred ---------hhh----HHHHHHHHHHhC--CcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH---------H
Q 026978 71 ---------FLD----QLEIVHAIKVAG--NIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE---------A 124 (230)
Q Consensus 71 ---------~~~----~~~ll~Aa~~ag--~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~---------~ 124 (230)
+.+ .+.++..+++.+ .-.++|. |..|.... + ....|..+|..++.+.+ .
T Consensus 97 ~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~ltrs~ala~e~~~ 171 (254)
T d2gdza1 97 NWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV---A--QQPVYCASKHGIVGFTRSAALAANLMN 171 (254)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC---C--CccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 222 233344443332 0134553 33332211 1 12357789987665432 2
Q ss_pred cCCCEEEEeccccc
Q 026978 125 AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ~gl~~tilr~g~~~ 138 (230)
.|+....|.||+.-
T Consensus 172 ~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 172 SGVRLNAICPGFVN 185 (254)
T ss_dssp CCEEEEEEEESCBS
T ss_pred CCEEEEEEEcCCCC
Confidence 68999999999874
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.95 E-value=2.7e-05 Score=62.00 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=81.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~ 70 (230)
|+++|+++|++|.+..|+... +++.+ ..++ ...+..+.+|++|++++.+.++ +.|++|+.++...
T Consensus 34 ia~~la~~Ga~Vvi~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~ 108 (272)
T d1g0oa_ 34 MAMELGRRGCKVIVNYANSTE-----SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS 108 (272)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCEEEEEeCCchH-----HHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccch
Confidence 478999999999999886431 22211 1222 2347789999999888877655 6799999998641
Q ss_pred -------------------hhhHHHHHHHHHH----hCCcceEecccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -------------------FLDQLEIVHAIKV----AGNIKRFLPSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~----ag~Vkr~v~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+.+++.. .| -..++.|..+..... .....|..+|..++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g-~~i~i~s~~~~~~~~----~~~~~Y~asKaal~~ltk~lA~ 183 (272)
T d1g0oa_ 109 FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RLILMGSITGQAKAV----PKHAVYSGSKGAIETFARCMAI 183 (272)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EEEEECCGGGTCSSC----SSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHhhhccceeeeecccccccccccc-ccccccccccccccc----cchhhHHHHHHHHHHHHHHHHH
Confidence 2234444554443 33 122344544432111 1123466899888776653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 184 e~~~~gIrVN~I~PG~v~T 202 (272)
T d1g0oa_ 184 DMADKKITVNVVAPGGIKT 202 (272)
T ss_dssp HHGGGTCEEEEEEECCBSS
T ss_pred HhchhCeEEEEEccCCcCC
Confidence 689999999998753
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.90 E-value=8.5e-05 Score=58.65 Aligned_cols=126 Identities=13% Similarity=0.167 Sum_probs=80.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------C-CCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------E-VDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g-~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+.. +++. .+.+. ...+..+.+|++|.+++.++++ | .|+|+++++..
T Consensus 22 ia~~la~~G~~V~i~~r~~~------~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~ 95 (258)
T d1ae1a_ 22 IVEELAGLGARVYTCSRNEK------ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV 95 (258)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEecccccc
Confidence 46889999999999999743 2221 11222 2346778999999988766543 3 79999999875
Q ss_pred C-------------------hhhH----HHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLDQ----LEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~~----~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+. +.++...++.+ ..++|. |..+.... + ....|..+|..++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~---~--~~~~Y~~sK~al~~lt~~ 169 (258)
T d1ae1a_ 96 IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL---P--SVSLYSASKGAINQMTKS 169 (258)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC---T--TCHHHHHHHHHHHHHHHH
T ss_pred ccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccccc---c--cchhHHHHHHHHHHHHHH
Confidence 1 1222 33344455555 567663 33332211 1 123566899888776553
Q ss_pred -------cCCCEEEEeccccc
Q 026978 125 -------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -------~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 170 lA~el~~~gIrvN~I~PG~i~ 190 (258)
T d1ae1a_ 170 LACEWAKDNIRVNSVAPGVIL 190 (258)
T ss_dssp HHHHHGGGTEEEEEEEECSBC
T ss_pred HHHhcCcCcEEEEEEeeCccc
Confidence 58999999999875
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.89 E-value=0.00017 Score=57.33 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+. ++++.+. ++ ...+..+.+|++|.+++.++++ .+|++|++++...
T Consensus 21 ia~~la~~Ga~V~i~~r~~------~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~ 93 (276)
T d1bdba_ 21 LVDRFVAEGAKVAVLDKSA------ERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYS 93 (276)
T ss_dssp HHHHHHHTTCEEEEEESCH------HHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTT
T ss_pred HHHHHHHCCCEEEEEECCH------HHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCC
Confidence 4789999999999999973 2332222 22 3468889999999988877654 6899999998531
Q ss_pred ----------------------hhh----HHHHHHHHHHhCCcceEe-cccccccCCCCCCCCchhHHHHHHHHHHHHHH
Q 026978 71 ----------------------FLD----QLEIVHAIKVAGNIKRFL-PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE 123 (230)
Q Consensus 71 ----------------------~~~----~~~ll~Aa~~ag~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~ 123 (230)
+.+ .+.++..+++.+ -+.++ .|..|.... + ....|..+|..++.+.+
T Consensus 94 ~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~---~--~~~~Y~asKaal~~ltr 167 (276)
T d1bdba_ 94 TALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN---G--GGPLYTAAKHAIVGLVR 167 (276)
T ss_dssp CCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT---S--SCHHHHHHHHHHHHHHH
T ss_pred CccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC---C--CCchHHHHHHHHHHHHH
Confidence 112 233444555554 23332 344443211 1 12357789988877655
Q ss_pred H------cCCCEEEEeccccc
Q 026978 124 A------AQIPYTFVSANLCG 138 (230)
Q Consensus 124 ~------~gl~~tilr~g~~~ 138 (230)
. .++....|.||+.-
T Consensus 168 ~lA~ela~~IrVN~I~PG~i~ 188 (276)
T d1bdba_ 168 ELAFELAPYVRVNGVGSGGIN 188 (276)
T ss_dssp HHHHHHTTTCEEEEEEECCCC
T ss_pred HHHHHhhcceEEcccCCCCEe
Confidence 3 34888888998874
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.88 E-value=4.6e-05 Score=59.62 Aligned_cols=125 Identities=7% Similarity=0.002 Sum_probs=78.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~-- 70 (230)
++++|+++|++|.+..|+.. +.+ ..+.+ ...+..+++|++|++++.++++ +.|++||+++...
T Consensus 21 ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~ 93 (241)
T d2a4ka1 21 ALDLFAREGASLVAVDREER------LLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA 93 (241)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTT
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEecccccccccc
Confidence 47899999999999999743 222 22233 3457789999999998876655 6899999987541
Q ss_pred -----------------hhhHHHHHHHHHHhC-CcceEe-cccccccCCCCCCCCchh-HHHHHHHHHHHHHHH------
Q 026978 71 -----------------FLDQLEIVHAIKVAG-NIKRFL-PSEFGCEEDKVRPLPPFE-AYLEKKRIVRRAIEA------ 124 (230)
Q Consensus 71 -----------------~~~~~~ll~Aa~~ag-~Vkr~v-~S~~g~~~~~~~~~~p~~-~~~~~K~~~e~~l~~------ 124 (230)
+.+...+.+++...- .-+.++ .|..+.. . .|.. .|..+|..++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----~-~~~~~~Y~~sK~al~~lt~~lA~el~ 167 (241)
T d2a4ka1 94 LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----G-AFGLAHYAAGKLGVVGLARTLALELA 167 (241)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----C-HHHHHHHHHCSSHHHHHHHHHHHHHT
T ss_pred chhhhhccccccccccccccccccccccccccccccceeeccccccc-----c-ccCccccchhhHHHHHHHHHHHHHHh
Confidence 123344444443321 012222 2322211 0 1333 455788888876553
Q ss_pred -cCCCEEEEeccccc
Q 026978 125 -AQIPYTFVSANLCG 138 (230)
Q Consensus 125 -~gl~~tilr~g~~~ 138 (230)
.|+....|.||+.-
T Consensus 168 ~~gIrvN~I~PG~v~ 182 (241)
T d2a4ka1 168 RKGVRVNVLLPGLIQ 182 (241)
T ss_dssp TTTCEEEEEEECSBC
T ss_pred HhCCEEeeeccCcCC
Confidence 58999999999874
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=0.00012 Score=58.54 Aligned_cols=132 Identities=12% Similarity=0.119 Sum_probs=81.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHh-hhhhhc--CCCeEEEEecCCCHHHHHHHhc-----CCCEEEEcCCCCC--
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIEGELDEHKKIVSILK-----EVDVVISTVAYPQ-- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~-~l~~l~--~~gv~vv~gD~~d~~~L~~al~-----g~D~Vi~~~~~~~-- 70 (230)
+++.|+++|.+|..+.+........++.. ..+.+. ...+..+.+|++|.+++.++++ ..|+++++++...
T Consensus 18 ~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~ 97 (285)
T d1jtva_ 18 LAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG 97 (285)
T ss_dssp HHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCS
T ss_pred HHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccchhhhhhcccccccc
Confidence 46788999988665544322110011111 111221 2357889999999999888765 4699999998641
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ -.++|. |..|..... ....|..+|..++.+.+.
T Consensus 98 ~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~-----~~~~Y~asKaal~~l~~~la~ 171 (285)
T d1jtva_ 98 PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP-----FNDVYCASKFALEGLCESLAV 171 (285)
T ss_dssp CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT-----TCHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCC-----CchHHHHHHHHHHHHHHHHHH
Confidence 122 344455566666 567663 444432111 123577899888776543
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+..+.|.||++-
T Consensus 172 El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 172 LLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp HHGGGTEEEEEEEECCBC
T ss_pred HhhccCcEEEEEecCCCC
Confidence 68999999999874
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=0.00031 Score=55.22 Aligned_cols=129 Identities=22% Similarity=0.223 Sum_probs=77.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhh-hhhcC----CCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIH-KEFQG----IGVTIIEGELDEHKKIVSILK-------EVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l-~~l~~----~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~ 68 (230)
+++.|+++|++|.+..|+.. +.+.+ ++++. ..+..+.+|++|++++.++++ ++|++||+++.
T Consensus 26 iA~~la~~G~~Vv~~~r~~~------~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 26 VARALVQQGLKVVGCARTVG------NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL 99 (257)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccc
Confidence 47899999999999999743 32222 12322 246788999999988777544 68999999987
Q ss_pred CC-------------------hhhHHH----HHHHHHHhCC-cceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHH
Q 026978 69 PQ-------------------FLDQLE----IVHAIKVAGN-IKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAI 122 (230)
Q Consensus 69 ~~-------------------~~~~~~----ll~Aa~~ag~-Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l 122 (230)
.. +.+... ++...++.+. -.++|. |..|... .+......|..+|..+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---~p~~~~~~Y~~sKaal~~lt 176 (257)
T d1xg5a_ 100 ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---LPLSVTHFYSATKYAVTALT 176 (257)
T ss_dssp CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---CSCGGGHHHHHHHHHHHHHH
T ss_pred cCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---CCCcccHHHHHHHHHHHhCH
Confidence 41 122333 3444445431 135553 3333211 11111234668888877554
Q ss_pred H---------HcCCCEEEEeccccc
Q 026978 123 E---------AAQIPYTFVSANLCG 138 (230)
Q Consensus 123 ~---------~~gl~~tilr~g~~~ 138 (230)
+ ..++....|.||..-
T Consensus 177 r~la~el~~~~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 177 EGLRQELREAQTHIRATCISPGVVE 201 (257)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 3 157888888888664
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.74 E-value=0.00015 Score=56.98 Aligned_cols=131 Identities=16% Similarity=0.134 Sum_probs=79.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCC-CHHHHHHHh-------cCCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELD-EHKKIVSIL-------KEVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~-d~~~L~~al-------~g~D~Vi~~~~~~~- 70 (230)
++++|+++|.+|.++.|+.... +..+.++. ....++.++..|++ |.+++.+++ .++|++|+++|...
T Consensus 21 ~A~~la~~G~~vii~~r~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~ 97 (254)
T d1sbya1 21 TSRELVKRNLKNFVILDRVENP---TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD 97 (254)
T ss_dssp HHHHHHHTCCSEEEEEESSCCH---HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCT
T ss_pred HHHHHHHCCCEEEEEECCcccH---HHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCCH
Confidence 4789999999999999876431 12222222 22346888999997 555555443 36899999999763
Q ss_pred ----------hhhHHHHHHH----HHHh--CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHH-------Hc
Q 026978 71 ----------FLDQLEIVHA----IKVA--GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIE-------AA 125 (230)
Q Consensus 71 ----------~~~~~~ll~A----a~~a--g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~-------~~ 125 (230)
+.++.++..+ +++. |.-.++|. |..|.... .....|..+|..+..+.+ ..
T Consensus 98 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~-----~~~~~Y~asKaal~~~t~~la~el~~~ 172 (254)
T d1sbya1 98 HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----HQVPVYSASKAAVVSFTNSLAKLAPIT 172 (254)
T ss_dssp TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC-----CCCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 2344444443 3222 11245553 43442211 112367789988776544 36
Q ss_pred CCCEEEEeccccch
Q 026978 126 QIPYTFVSANLCGA 139 (230)
Q Consensus 126 gl~~tilr~g~~~~ 139 (230)
|+....|.||+..-
T Consensus 173 gIrVn~I~PG~v~T 186 (254)
T d1sbya1 173 GVTAYSINPGITRT 186 (254)
T ss_dssp SEEEEEEEECSEES
T ss_pred CeEEEEEEeCCCcC
Confidence 89999999998753
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.72 E-value=8.8e-05 Score=52.30 Aligned_cols=81 Identities=14% Similarity=0.207 Sum_probs=59.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.+.|++|+++..+ +++.+ .+...+..++.||.+|++.|.++ ++.+|+||.+++... ....-+..
T Consensus 15 la~~L~~~g~~vvvid~d------~~~~~---~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~-~~~~~~~~ 84 (134)
T d2hmva1 15 IVKELHRMGHEVLAVDIN------EEKVN---AYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI-QASTLTTL 84 (134)
T ss_dssp HHHHHHHTTCCCEEEESC------HHHHH---HTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCH-HHHHHHHH
T ss_pred HHHHHHHCCCeEEEecCc------HHHHH---HHHHhCCcceeeecccchhhhccCCccccEEEEEcCchH-HhHHHHHH
Confidence 468899999999999986 33433 45567889999999999999988 889999998876532 22233344
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
+++..+ ..+++.
T Consensus 85 ~~~~~~-~~~iia 96 (134)
T d2hmva1 85 LLKELD-IPNIWV 96 (134)
T ss_dssp HHHHTT-CSEEEE
T ss_pred HHHHcC-CCcEEe
Confidence 556667 777663
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.69 E-value=0.00013 Score=58.33 Aligned_cols=131 Identities=12% Similarity=0.085 Sum_probs=77.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+..... +..+.+..-....+..+.+|++|.+++.++++ ++|++||+++...
T Consensus 41 iA~~la~~Ga~Vii~~r~~~~l~--~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~ 118 (294)
T d1w6ua_ 41 MTTLLSSLGAQCVIASRKMDVLK--ATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP 118 (294)
T ss_dssp HHHHHHHTTCEEEEEESCHHHHH--HHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred HHHHHHHcCCEEEEEECCHHHHH--HHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccc
Confidence 47899999999999999753210 01111211123457889999999998876543 6899999998752
Q ss_pred ----------------hhhHHHH----HHHHHHhCCcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----------------FLDQLEI----VHAIKVAGNIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----------------~~~~~~l----l~Aa~~ag~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
......+ +......+.-..++. +. .+..... ....|..+|..++.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~-----~~~~YsasKaal~~ltk~lA~e 193 (294)
T d1w6ua_ 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG-----FVVPSASAKAGVEAMSKSLAAE 193 (294)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT-----TCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc-----ccchHHHHHHHHHHHHHHHHHH
Confidence 0111111 222222221223332 22 2221110 123577899988876653
Q ss_pred ---cCCCEEEEeccccc
Q 026978 125 ---AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 194 la~~gIrVN~I~PG~i~ 210 (294)
T d1w6ua_ 194 WGKYGMRFNVIQPGPIK 210 (294)
T ss_dssp HGGGTEEEEEEEECCBC
T ss_pred HhHhCeEEEEEccCccc
Confidence 68999999999875
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.68 E-value=0.00013 Score=51.41 Aligned_cols=81 Identities=16% Similarity=0.210 Sum_probs=60.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
|++.|.++|++|+++.++ |++.+.+.. ..+..++.||.+|++.|.++ ++.+|+++.+.... +...-+..
T Consensus 15 la~~L~~~g~~v~vid~d------~~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d--~~N~~~~~ 84 (132)
T d1lssa_ 15 LAKSLSEKGHDIVLIDID------KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--EVNLMSSL 84 (132)
T ss_dssp HHHHHHHTTCEEEEEESC------HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--HHHHHHHH
T ss_pred HHHHHHHCCCCcceecCC------hhhhhhhhh--hhhhhhccCcccchhhhhhcChhhhhhhcccCCcH--HHHHHHHH
Confidence 467889999999999987 444443322 24889999999999999998 68999999986553 23333455
Q ss_pred HHHHhCCcceEec
Q 026978 80 AIKVAGNIKRFLP 92 (230)
Q Consensus 80 Aa~~ag~Vkr~v~ 92 (230)
.++..| +++.|.
T Consensus 85 ~~k~~~-~~~iI~ 96 (132)
T d1lssa_ 85 LAKSYG-INKTIA 96 (132)
T ss_dssp HHHHTT-CCCEEE
T ss_pred HHHHcC-CceEEE
Confidence 667888 888763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=0.00026 Score=55.42 Aligned_cols=130 Identities=8% Similarity=0.094 Sum_probs=75.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.... +.++.+.. ....+..+.+|++|.+++.++++ +.|++||+++...
T Consensus 26 iA~~la~~Ga~V~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~ 101 (256)
T d1ulua_ 26 IAAKLKEAGAEVALSYQAERLR---PEAEKLAE-ALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREA 101 (256)
T ss_dssp HHHHHHHTTCEEEEEESSGGGH---HHHHHHHH-HTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHH
T ss_pred HHHHHHHCCCEEEEEeCcHHHH---HHHHHhhh-ccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccc
Confidence 4788999999998777764211 11111111 12357789999999988877654 6799999998631
Q ss_pred --------------------hhhHHHHHHHHHHhC-CcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 --------------------FLDQLEIVHAIKVAG-NIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 --------------------~~~~~~ll~Aa~~ag-~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+...+..++...- .-.++|. |..+.... .....|..+|..++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~-----~~~~~Y~asKaal~~ltr~lA~ 176 (256)
T d1ulua_ 102 MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-----PKYNVMAIAKAALEASVRYLAY 176 (256)
T ss_dssp HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----TTCHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC-----CCchHHHHHHHHHHHHHHHHHH
Confidence 011222222222110 0023432 33332111 1224577899988876653
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 177 ela~~gIrVN~I~PG~i~t 195 (256)
T d1ulua_ 177 ELGPKGVRVNAISAGPVRT 195 (256)
T ss_dssp HHGGGTCEEEEEEECCC--
T ss_pred HhcccCCEEeeeccceeee
Confidence 689999999997643
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.55 E-value=4e-05 Score=60.38 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=73.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.. +.+.++.+ +.....+|+.|.+++.+++ -++|++||+++...
T Consensus 16 iA~~la~~Ga~V~i~~r~~~------~~~~~~~~---~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~ 86 (252)
T d1zmta1 16 SALRLSEAGHTVACHDESFK------QKDELEAF---AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQ 86 (252)
T ss_dssp HHHHHHHTTCEEEECCGGGG------SHHHHHHH---HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHhh---hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCC
Confidence 36789999999999988743 22223222 2233456666544443333 37899999887531
Q ss_pred -----------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 -----------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 -----------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
+.+ .+.++..+++.+ -.++|. |..+.... + ....|..+|..++.+.+.
T Consensus 87 ~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~lA~ 160 (252)
T d1zmta1 87 PIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW---K--ELSTYTSARAGACTLANALSK 160 (252)
T ss_dssp CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC---T--TCHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccc---c--cccccccccccHHHHHHHHHH
Confidence 112 233444455555 457663 33332111 1 123677899888776553
Q ss_pred ----cCCCEEEEeccccc
Q 026978 125 ----AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ----~gl~~tilr~g~~~ 138 (230)
.|+....|.||+..
T Consensus 161 ela~~gIrVN~I~PG~i~ 178 (252)
T d1zmta1 161 ELGEYNIPVFAIGPNYLH 178 (252)
T ss_dssp HHGGGTCCEEEEEESSBC
T ss_pred HhcccCcEEEEEecCCCc
Confidence 68999999999874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.50 E-value=0.00039 Score=56.01 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=79.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCC---CcchHhh-hhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNS---RPSKLEI-HKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~---~p~k~~~-l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+..... ..++++. ...+... ...+.+|+.|.++.++.++ ++|++||++|..
T Consensus 23 iA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~ 101 (302)
T d1gz6a_ 23 YALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL 101 (302)
T ss_dssp HHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-TCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-ccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 46889999999999988754221 0112221 1122222 3455678887665554433 689999999875
Q ss_pred C-------------------hhh----HHHHHHHHHHhCCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------FLD----QLEIVHAIKVAGNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~~~----~~~ll~Aa~~ag~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. +.+ .+.++..+++.+ -.|+|. |..|..... ....|..+|..+..+.+.
T Consensus 102 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~-----~~~~Y~asKaal~~lt~~ 175 (302)
T d1gz6a_ 102 RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF-----GQANYSAAKLGLLGLANT 175 (302)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----TCHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCC-----CcHHHHHHHHHHHHHHHH
Confidence 1 222 344555566666 467774 333322111 124677899888876553
Q ss_pred -------cCCCEEEEeccccch
Q 026978 125 -------AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -------~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 176 la~E~~~~gIrVN~I~PG~~~t 197 (302)
T d1gz6a_ 176 LVIEGRKNNIHCNTIAPNAGSR 197 (302)
T ss_dssp HHHHTGGGTEEEEEEEEECCST
T ss_pred HHHHHhccCCceeeeCCCCCCc
Confidence 689999999987643
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.34 E-value=9.3e-05 Score=55.66 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=48.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh-hh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK-EF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~-~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++.|+++|.+|+++.|+.. +.+.+. .+ ...++++..+|+.|.+++.+++.++|+|||+++..
T Consensus 39 ia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 39 SAALLAGEGAEVVLCGRKLD------KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp HHHHHHHTTCEEEEEESSHH------HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCTT
T ss_pred HHHHHHhhccchhhcccchH------HHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCccc
Confidence 46789999999999999853 322221 11 12457788999999999999999999999998853
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.21 E-value=0.0021 Score=50.35 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=77.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+.... ++.+.+... ...+.+...|+++.++..+++ ..+|++|++++...
T Consensus 23 iA~~la~~Ga~V~i~~r~~~~~---~~~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~ 98 (274)
T d2pd4a1 23 IAQSCFNQGATLAFTYLNESLE---KRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 98 (274)
T ss_dssp HHHHHHTTTCEEEEEESSTTTH---HHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGG
T ss_pred HHHHHHHCCCEEEEEeCCHHHH---HHHHHHHhh-CCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccc
Confidence 4789999999999999985321 233322222 345778899999988776665 36799999998642
Q ss_pred ----h-----h-----------hHHHHHHHHHHhCCcceEe--cccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 ----F-----L-----------DQLEIVHAIKVAGNIKRFL--PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 ----~-----~-----------~~~~ll~Aa~~ag~Vkr~v--~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
. . ....+.....+...-.+.| .|..+..... .....|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----~~~~~y~asK~al~~ltr~lA~e 174 (274)
T d2pd4a1 99 LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----AHYNVMGLAKAALESAVRYLAVD 174 (274)
T ss_dssp GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----ccchhhhHHHHHHHHHHHhhHHH
Confidence 0 0 1111222221111012222 2334332111 1123566789888776653
Q ss_pred ---cCCCEEEEeccccch
Q 026978 125 ---AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ---~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+...
T Consensus 175 ~~~~GIrvN~I~PG~v~T 192 (274)
T d2pd4a1 175 LGKHHIRVNALSAGPIRT 192 (274)
T ss_dssp HHTTTCEEEEEEECCCCC
T ss_pred hcCcCceecccccCcccC
Confidence 689999999998754
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.0048 Score=47.99 Aligned_cols=127 Identities=15% Similarity=0.104 Sum_probs=76.2
Q ss_pred HHHHh---hCCCeEEEEEcCCCCCCCcchHhhhh-hhc----CCCeEEEEecCCCHHHHHHHhc-----------CCCEE
Q 026978 2 VKASV---SSGHKTFVYARPVTQNSRPSKLEIHK-EFQ----GIGVTIIEGELDEHKKIVSILK-----------EVDVV 62 (230)
Q Consensus 2 v~~Ll---~~g~~V~~l~R~~~~~~~p~k~~~l~-~l~----~~gv~vv~gD~~d~~~L~~al~-----------g~D~V 62 (230)
+++|. ++|+.|.+..|+.. +++.+. ++. ...+..+.+|++|.+++.++++ ..|++
T Consensus 23 A~~lA~~~~~G~~Vv~~~r~~~------~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~l 96 (259)
T d1oaaa_ 23 APQLARLLSPGSVMLVSARSES------MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLL 96 (259)
T ss_dssp HHHHHTTBCTTCEEEEEESCHH------HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEE
T ss_pred HHHHHhcccCCCEEEEEECCHH------HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEE
Confidence 45664 47999999999743 322221 221 2246789999999988877652 34788
Q ss_pred EEcCCCC----------------------ChhhHHHHHHHHHHh----C-CcceEec--ccccccCCCCCCCCchhHHHH
Q 026978 63 ISTVAYP----------------------QFLDQLEIVHAIKVA----G-NIKRFLP--SEFGCEEDKVRPLPPFEAYLE 113 (230)
Q Consensus 63 i~~~~~~----------------------~~~~~~~ll~Aa~~a----g-~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~ 113 (230)
++.++.. |+.+...+.+++... + .-.++|. |..|.... + ....|..
T Consensus 97 vnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~---~--~~~~Y~a 171 (259)
T d1oaaa_ 97 INNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY---K--GWGLYCA 171 (259)
T ss_dssp EECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC---T--TCHHHHH
T ss_pred EecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC---c--cchHHHH
Confidence 8887742 123455555655442 1 0124442 33332211 1 1235678
Q ss_pred HHHHHHHHHHH-----cCCCEEEEeccccch
Q 026978 114 KKRIVRRAIEA-----AQIPYTFVSANLCGA 139 (230)
Q Consensus 114 ~K~~~e~~l~~-----~gl~~tilr~g~~~~ 139 (230)
+|..++.+.+. .|+....|.||+..-
T Consensus 172 sKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 172 GKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 99888766543 688899999988753
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.0011 Score=52.38 Aligned_cols=63 Identities=17% Similarity=0.304 Sum_probs=45.7
Q ss_pred CHHHHhhC-CCeEEEEEcCCCCCCCcchHhh-hhhhc--CCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Q 026978 1 MVKASVSS-GHKTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~-g~~V~~l~R~~~~~~~p~k~~~-l~~l~--~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~ 69 (230)
++++|+++ |+.|.+..|+.. +.+. .+.++ ...++++.+|++|.+++.++++ ..|++||.+|..
T Consensus 19 ~A~~la~~~g~~Vi~~~r~~~------~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~ 92 (275)
T d1wmaa1 19 IVRDLCRLFSGDVVLTARDVT------RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 92 (275)
T ss_dssp HHHHHHHHSSSEEEEEESSHH------HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHhCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcC
Confidence 36788875 899999999853 3222 12232 3468899999999988776543 679999999864
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.0035 Score=49.14 Aligned_cols=125 Identities=17% Similarity=0.182 Sum_probs=75.6
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhh----hhcCCCeEEEEecCCCHHHHHHHh-------cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHK----EFQGIGVTIIEGELDEHKKIVSIL-------KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~----~l~~~gv~vv~gD~~d~~~L~~al-------~g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+.. +++.+. ......+..+..|.++.+...... .+.|++++.++..
T Consensus 30 iA~~la~~G~~Vil~~r~~~------~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~ 103 (269)
T d1xu9a_ 30 MAYHLAKMGAHVVVTARSKE------TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN 103 (269)
T ss_dssp HHHHHHHTTCEEEEEESCHH------HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCC
T ss_pred HHHHHHHCCCEEEEEECCHH------HHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccc
Confidence 47899999999999999743 222211 112334677888998876665443 3679999988764
Q ss_pred C-------------------h----hhHHHHHHHHHHhCCcceEe--cccccccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 026978 70 Q-------------------F----LDQLEIVHAIKVAGNIKRFL--PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA 124 (230)
Q Consensus 70 ~-------------------~----~~~~~ll~Aa~~ag~Vkr~v--~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~ 124 (230)
. + ...+.++..+++.+ .++| .|..|.... + ....|..+|..++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~---p--~~~~Y~asKaal~~~~~~ 176 (269)
T d1xu9a_ 104 TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAY---P--MVAAYSASKFALDGFFSS 176 (269)
T ss_dssp CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCC---T--TCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCC---C--CchHHHHHHHHHHHHHHH
Confidence 1 1 12344444455443 3444 343332111 1 124677899888765542
Q ss_pred ---------cCCCEEEEeccccc
Q 026978 125 ---------AQIPYTFVSANLCG 138 (230)
Q Consensus 125 ---------~gl~~tilr~g~~~ 138 (230)
.++..+.|.||++-
T Consensus 177 La~El~~~~~~I~V~~v~PG~v~ 199 (269)
T d1xu9a_ 177 IRKEYSVSRVNVSITLCVLGLID 199 (269)
T ss_dssp HHHHHHHHTCCCEEEEEEECCBC
T ss_pred HHHHhhhcCCCEEEEEEecCcCC
Confidence 24777889998874
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=96.92 E-value=0.0041 Score=48.35 Aligned_cols=64 Identities=8% Similarity=0.221 Sum_probs=43.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-------h---cCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-------L---KEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-------l---~g~D~Vi~~~~~~ 69 (230)
++++|+++|++|.+..|+... ..+.+.+.....+..+.+|+.+.++...+ + ...|+++|+++..
T Consensus 24 iA~~la~~Ga~Vil~~~~~~~-----~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 24 IARVAQEQGAQLVLTGFDRLR-----LIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM 97 (268)
T ss_dssp HHHHHHHTTCEEEEEECSCHH-----HHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred HHHHHHHcCCEEEEEeCChHH-----HHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeeccccc
Confidence 468899999999999887431 11223232234577889999987655443 2 2469999999854
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0052 Score=43.79 Aligned_cols=84 Identities=10% Similarity=0.113 Sum_probs=57.8
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+++.|.++|++|+++..+.... .+.+..+...|+.++.||.+|++.|.++ ++.+|+||.+.+. -.....++.
T Consensus 18 l~~~L~~~~~~v~vId~d~~~~-----~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~--d~~n~~~~~ 90 (153)
T d1id1a_ 18 TILQLNQRGQNVTVISNLPEDD-----IKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN--DADNAFVVL 90 (153)
T ss_dssp HHHHHHHTTCCEEEEECCCHHH-----HHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC--HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeccchhH-----HHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcccc--HHHHHHHHH
Confidence 4678999999999999864211 1122334457999999999999999877 6688999998754 233444555
Q ss_pred HHHHhCCcceEe
Q 026978 80 AIKVAGNIKRFL 91 (230)
Q Consensus 80 Aa~~ag~Vkr~v 91 (230)
.+++.+...+++
T Consensus 91 ~~r~~~~~~~ii 102 (153)
T d1id1a_ 91 SAKDMSSDVKTV 102 (153)
T ss_dssp HHHHHTSSSCEE
T ss_pred HHHHhCCCCceE
Confidence 666643144555
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.0071 Score=46.71 Aligned_cols=131 Identities=12% Similarity=0.135 Sum_probs=77.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK-------EVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~-------g~D~Vi~~~~~~~--- 70 (230)
+++.|+++|++|.+..|+... .++++.+.. .......+..|+.+..+....++ ..|++||+++...
T Consensus 23 iA~~l~~~G~~V~i~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~ 98 (258)
T d1qsga_ 23 IAQAMHREGAELAFTYQNDKL---KGRVEEFAA-QLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQ 98 (258)
T ss_dssp HHHHHHHTTCEEEEEESSTTT---HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGG
T ss_pred HHHHHHHcCCEEEEEeCCHHH---HHHHHHHHh-hcCCcceeecccchHHHHHHHHHHhhhcccccceEEEeeccccccc
Confidence 468899999999999997432 112222111 12356788889998777666543 4589999987641
Q ss_pred ---------------------hhhHHHHHHHHHHh-CCcceEe-cccccccCCCCCCCCchhHHHHHHHHHHHHHHH---
Q 026978 71 ---------------------FLDQLEIVHAIKVA-GNIKRFL-PSEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA--- 124 (230)
Q Consensus 71 ---------------------~~~~~~ll~Aa~~a-g~Vkr~v-~S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~--- 124 (230)
......+..++... ..-+.++ .|+.+..... + ....|..+|..++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~--~--~~~~Y~~sKaal~~ltr~lA~ 174 (258)
T d1qsga_ 99 LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI--P--NYNVMGLAKASLEANVRYMAN 174 (258)
T ss_dssp GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--T--TTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC--C--CcHHHHHHHHHHHHHHHHHHH
Confidence 01122233333221 1012233 3444432111 1 123577899988877654
Q ss_pred ----cCCCEEEEeccccch
Q 026978 125 ----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 ----~gl~~tilr~g~~~~ 139 (230)
+|+....|.||++.-
T Consensus 175 el~~~gIrVN~I~PG~i~T 193 (258)
T d1qsga_ 175 AMGPEGVRVNAISAGPIRT 193 (258)
T ss_dssp HHTTTTEEEEEEEECCCCC
T ss_pred HhCccCceeeccccccccc
Confidence 689999999998753
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.017 Score=44.24 Aligned_cols=126 Identities=13% Similarity=0.181 Sum_probs=78.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-------hcCCCEEEEcCCCCC---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-------LKEVDVVISTVAYPQ--- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-------l~g~D~Vi~~~~~~~--- 70 (230)
++++|+++|++|.+..|+..... +..+++ .........|+.+.+.+... ....|.+++......
T Consensus 21 ia~~la~~G~~V~~~~r~~~~~~-----~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (248)
T d2o23a1 21 TAERLVGQGASAVLLDLPNSGGE-----AQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASK 94 (248)
T ss_dssp HHHHHHHTTCEEEEEECTTSSHH-----HHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCChHHHH-----HHHHHh-CCCcccccccccccccccccccccccccccccccccccccccCCC
Confidence 47899999999999999864321 122334 35678888899887655443 335688887765421
Q ss_pred ----------------------hhhHHHHHHHHHHh----------CCcceEec--ccccccCCCCCCCCchhHHHHHHH
Q 026978 71 ----------------------FLDQLEIVHAIKVA----------GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKR 116 (230)
Q Consensus 71 ----------------------~~~~~~ll~Aa~~a----------g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~ 116 (230)
+.+..++..++... + -.++|. |..|.... + ....|..+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~---~--~~~~Y~asKa 168 (248)
T d2o23a1 95 TYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEGQ---V--GQAAYSASKG 168 (248)
T ss_dssp SEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC---T--TCHHHHHHHH
T ss_pred cccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC-ceEEEEecchhhccCC---C--CchHHHHHHH
Confidence 12345555555332 1 124553 33332111 1 1246778999
Q ss_pred HHHHHHHH-------cCCCEEEEeccccc
Q 026978 117 IVRRAIEA-------AQIPYTFVSANLCG 138 (230)
Q Consensus 117 ~~e~~l~~-------~gl~~tilr~g~~~ 138 (230)
.++.+.+. .|+....|.||++.
T Consensus 169 al~~lt~~la~e~~~~gIrvN~I~PG~i~ 197 (248)
T d2o23a1 169 GIVGMTLPIARDLAPIGIRVMTIAPGLFG 197 (248)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhcccCcceeeeccCcee
Confidence 98876654 68999999999864
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.60 E-value=0.01 Score=45.30 Aligned_cols=121 Identities=9% Similarity=-0.004 Sum_probs=67.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHH-------HHHhc--CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKI-------VSILK--EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L-------~~al~--g~D~Vi~~~~~~~- 70 (230)
++++|+++|++|.+++|+.... ......+.+|..+.+.. ...++ ..|+|||++|...
T Consensus 18 ia~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~ 84 (235)
T d1ooea_ 18 ILEFFKKNGYTVLNIDLSANDQ-------------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG 84 (235)
T ss_dssp HHHHHHHTTEEEEEEESSCCTT-------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEECCchhc-------------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccccc
Confidence 4789999999999999975432 11223445566543332 22333 4799999998531
Q ss_pred -------------------hhhHHHHHHHHHHhC-CcceEec-cc-ccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -------------------FLDQLEIVHAIKVAG-NIKRFLP-SE-FGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~ag-~Vkr~v~-S~-~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+...+..++...- .-.++|. |+ .+... ......|..+|..++.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaal~~l~~~la~e 159 (235)
T d1ooea_ 85 GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----TPSMIGYGMAKAAVHHLTSSLAAK 159 (235)
T ss_dssp BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----CTTBHHHHHHHHHHHHHHHHHHST
T ss_pred ccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC-----cccccchHHHHHHHHHHHHHHHHH
Confidence 122333344443321 0124442 33 22211 11124677999999887764
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.++....|.||+...
T Consensus 160 ~~~~~~~i~v~~i~Pg~~~T 179 (235)
T d1ooea_ 160 DSGLPDNSAVLTIMPVTLDT 179 (235)
T ss_dssp TSSCCTTCEEEEEEESCBCC
T ss_pred hccCCCceEEEEEecCcCcC
Confidence 245566678887653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=96.59 E-value=0.009 Score=46.62 Aligned_cols=64 Identities=5% Similarity=0.062 Sum_probs=40.3
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhh----hhhhcCCCeEEE-----------------EecCCCHHHHHHHh---
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEI----HKEFQGIGVTII-----------------EGELDEHKKIVSIL--- 56 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~----l~~l~~~gv~vv-----------------~gD~~d~~~L~~al--- 56 (230)
++++|+++|++|.+..|+... +++. +.......+..+ .+|+++.+++.+++
T Consensus 18 iA~~la~~Ga~V~i~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~ 92 (284)
T d1e7wa_ 18 IAEGLHAEGYAVCLHYHRSAA-----EANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAAC 92 (284)
T ss_dssp HHHHHHHTTCEEEEEESSCHH-----HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEeCCCHH-----HHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHHHHHH
Confidence 468899999999998876421 1111 111112223333 44577777777654
Q ss_pred ----cCCCEEEEcCCCC
Q 026978 57 ----KEVDVVISTVAYP 69 (230)
Q Consensus 57 ----~g~D~Vi~~~~~~ 69 (230)
-++|++||+++..
T Consensus 93 ~~~~G~iDiLVnnAG~~ 109 (284)
T d1e7wa_ 93 YTHWGRCDVLVNNASSF 109 (284)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCCEEEecCCcc
Confidence 3789999999864
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.43 E-value=0.018 Score=43.86 Aligned_cols=121 Identities=10% Similarity=-0.023 Sum_probs=68.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHH-------HHhc--CCCEEEEcCCCCC-
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIV-------SILK--EVDVVISTVAYPQ- 70 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~-------~al~--g~D~Vi~~~~~~~- 70 (230)
+++.|+++|++|.++.|..... ......+..|..+.+... +.+. .+|++||+++...
T Consensus 18 ~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~ 84 (236)
T d1dhra_ 18 CVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG 84 (236)
T ss_dssp HHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred HHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCccccc
Confidence 4788999999999998875421 112234444554433322 2222 3799999998521
Q ss_pred -------------------hhhHHHHHHHHHHh-CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHHHHHHH----
Q 026978 71 -------------------FLDQLEIVHAIKVA-GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVRRAIEA---- 124 (230)
Q Consensus 71 -------------------~~~~~~ll~Aa~~a-g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e~~l~~---- 124 (230)
+.+..++..++... ..-.++|. |..+.... + -...|..+|..++.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~---~--~~~~Y~asKaal~~lt~~la~E 159 (236)
T d1dhra_ 85 GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT---P--GMIGYGMAKGAVHQLCQSLAGK 159 (236)
T ss_dssp BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---T--TBHHHHHHHHHHHHHHHHHTST
T ss_pred ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc---c--CCcccHHHHHHHHHHHHHHHHH
Confidence 12233344444331 00124442 33332111 1 124677999999887764
Q ss_pred -----cCCCEEEEeccccch
Q 026978 125 -----AQIPYTFVSANLCGA 139 (230)
Q Consensus 125 -----~gl~~tilr~g~~~~ 139 (230)
.|+....|.||+..-
T Consensus 160 l~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 160 NSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp TSSCCTTCEEEEEEESCEEC
T ss_pred hccCCCcEEEEEEEeccCcC
Confidence 368888889988753
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=95.69 E-value=0.087 Score=40.19 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=39.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcch-HhhhhhhcCCCeEEEEecCCC----HHHHHH-------HhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSK-LEIHKEFQGIGVTIIEGELDE----HKKIVS-------ILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k-~~~l~~l~~~gv~vv~gD~~d----~~~L~~-------al~g~D~Vi~~~~~ 68 (230)
++++|+++|++|.+..|+.... .++ .+.+.......+..+..|..+ .+.+.+ .+.+.|++||+++.
T Consensus 17 ia~~la~~G~~Vvi~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~ 94 (266)
T d1mxha_ 17 IAVRLHQQGFRVVVHYRHSEGA--AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 94 (266)
T ss_dssp HHHHHHHTTCEEEEEESSCHHH--HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHCCCEEEEEECCchHH--HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 4789999999999999985321 011 111222223345556655543 233322 33478999999985
Q ss_pred C
Q 026978 69 P 69 (230)
Q Consensus 69 ~ 69 (230)
.
T Consensus 95 ~ 95 (266)
T d1mxha_ 95 Y 95 (266)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.62 E-value=0.049 Score=38.80 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=53.0
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+++.|.++||+|+++.|+. +|++.+..- .........+..+...+...+...|.++++.+.. .....+..
T Consensus 17 ~a~~L~~~g~~V~v~dr~~------~~a~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~---~~~~~~~~ 86 (182)
T d1e5qa1 17 TLDVLTDSGIKVTVACRTL------ESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT---FHATVIKS 86 (182)
T ss_dssp HHHHHHTTTCEEEEEESCH------HHHHHHHTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGG---GHHHHHHH
T ss_pred HHHHHHhCCCEEEEEECCh------HHHHHHHhc-ccccccccccccchhhhHhhhhccceeEeeccch---hhhHHHHH
Confidence 3678999999999999984 355544331 2345556667778888999999999999887543 34455566
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
+.+.+
T Consensus 87 ~~~~~ 91 (182)
T d1e5qa1 87 AIRQK 91 (182)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 66666
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.24 E-value=0.0086 Score=38.85 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=48.2
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
|++.|+++|++|.+-++..+ + ....|+..|+++..+.- .+. ++++|.||...+... .-.-+.+
T Consensus 17 LA~~L~~~G~~VsGSD~~~~----~----~t~~L~~~Gi~i~~gh~--~~~----i~~~d~vV~SsAI~~---~npel~~ 79 (89)
T d1j6ua1 17 VALHEFSNGNDVYGSNIEET----E----RTAYLRKLGIPIFVPHS--ADN----WYDPDLVIKTPAVRD---DNPEIVR 79 (89)
T ss_dssp HHHHHHHTTCEEEEECSSCC----H----HHHHHHHTTCCEESSCC--TTS----CCCCSEEEECTTCCT---TCHHHHH
T ss_pred HHHHHHhCCCeEEEEeCCCC----h----hHHHHHHCCCeEEeeec--ccc----cCCCCEEEEecCcCC---CCHHHHH
Confidence 46778899999999998753 2 22356678999877622 221 468999998877542 1234778
Q ss_pred HHHhCCcc
Q 026978 81 IKVAGNIK 88 (230)
Q Consensus 81 a~~ag~Vk 88 (230)
|++.| ++
T Consensus 80 A~~~g-Ip 86 (89)
T d1j6ua1 80 ARMER-VP 86 (89)
T ss_dssp HHHTT-CC
T ss_pred HHHcC-CC
Confidence 88888 65
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.05 E-value=0.15 Score=38.21 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=68.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC-----
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK------EVDVVISTVAYP----- 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~------g~D~Vi~~~~~~----- 69 (230)
++++|+++|++|.+..|+... ..+..+++|+.+......+.. ..+.++...+..
T Consensus 17 iA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (241)
T d1uaya_ 17 AALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 81 (241)
T ss_dssp HHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred HHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccc
Confidence 478999999999999997532 234567889988766555433 334555444322
Q ss_pred -------C-----------hhhHHHHHHHHHHh----------CCcceEec--ccccccCCCCCCCCchhHHHHHHHHHH
Q 026978 70 -------Q-----------FLDQLEIVHAIKVA----------GNIKRFLP--SEFGCEEDKVRPLPPFEAYLEKKRIVR 119 (230)
Q Consensus 70 -------~-----------~~~~~~ll~Aa~~a----------g~Vkr~v~--S~~g~~~~~~~~~~p~~~~~~~K~~~e 119 (230)
. +.....+..++... + -.++|. |..|..... ....|..+|..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~-----~~~~Y~asKaal~ 155 (241)
T d1uaya_ 82 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAFEGQI-----GQAAYAASKGGVV 155 (241)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHHHCCT-----TCHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhccCCC-----CchhhHHHHHHHH
Confidence 0 11222233332221 1 234553 333322111 1246778999888
Q ss_pred HHHHH-------cCCCEEEEeccccch
Q 026978 120 RAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 120 ~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.+.+. +|+....|.||++.-
T Consensus 156 ~lt~~lA~ela~~gIrVN~V~PG~i~T 182 (241)
T d1uaya_ 156 ALTLPAARELAGWGIRVVTVAPGLFDT 182 (241)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSCSS
T ss_pred HHHHHHHHHHhhcCCceeeecCCcccc
Confidence 76653 689999999998853
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.86 E-value=0.055 Score=36.96 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=48.4
Q ss_pred CCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHH-hcCCCEEEEcCCCCChhhHHHHHHHHHHhC
Q 026978 8 SGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSI-LKEVDVVISTVAYPQFLDQLEIVHAIKVAG 85 (230)
Q Consensus 8 ~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~a-l~g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag 85 (230)
+|++|.++..+.. +.+ .+...|+.++.||.+|++.|.++ +..++.||.+... ......++..+++..
T Consensus 20 ~~~~i~vi~~d~~------~~~---~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~--d~~n~~~~~~~r~~~ 87 (129)
T d2fy8a1 20 RGSEVFVLAEDEN------VRK---KVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLES--DSETIHCILGIRKID 87 (129)
T ss_dssp CGGGEEEEESCTT------HHH---HHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSS--HHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEcchH------HHH---HHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccc--hhhhHHHHHHHHHHC
Confidence 4778888887643 333 33457999999999999999887 6688999987653 334455566677754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.07 E-value=0.14 Score=36.79 Aligned_cols=59 Identities=19% Similarity=0.162 Sum_probs=38.7
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeE--EEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVT--IIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~--vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
+++.|+++||+|.+++|+. +|.+.+.. .+.. ... -....+++..++..+|.++.++...
T Consensus 17 mA~~L~~~G~~V~v~dr~~------~~~~~l~~---~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 17 LILNMNDHGFVVCAFNRTV------SKVDDFLA---NEAKGTKVL-GAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp HHHHHHHTTCCEEEECSST------HHHHHHHH---TTTTTSSCE-ECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred HHHHHHHCCCeEEEEcCCH------HHHHHHHH---hcccccccc-chhhhhhhhhhhcccceEEEecCch
Confidence 4688999999999999974 34443322 2211 111 1346778888888888888876543
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.98 E-value=0.031 Score=39.94 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=34.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|+++||+|++.+|+. ++.+. +...+.... ++..++++++|+||.|++.
T Consensus 15 ~A~~L~~~G~~V~~~d~~~------~~~~~---~~~~~~~~~-------~~~~e~~~~~d~ii~~v~~ 66 (161)
T d1vpda2 15 MSKNLLKAGYSLVVSDRNP------EAIAD---VIAAGAETA-------STAKAIAEQCDVIITMLPN 66 (161)
T ss_dssp HHHHHHHTTCEEEEECSCH------HHHHH---HHHTTCEEC-------SSHHHHHHHCSEEEECCSS
T ss_pred HHHHHHHCCCeEEEEeCCc------chhHH---HHHhhhhhc-------ccHHHHHhCCCeEEEEcCC
Confidence 4678999999999999873 33333 333455432 2345666778888888764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=93.79 E-value=0.062 Score=35.01 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=46.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
|++.|+++||+|++-++..+. ..+.|...|+++..++-.+ .++++|.||...+...- -.-+.+
T Consensus 24 LA~~L~~~G~~VsGSD~~~~~--------~~~~L~~~Gi~v~~g~~~~------~i~~~d~vV~S~AI~~~---npel~~ 86 (96)
T d1p3da1 24 IAEILLNEGYQISGSDIADGV--------VTQRLAQAGAKIYIGHAEE------HIEGASVVVVSSAIKDD---NPELVT 86 (96)
T ss_dssp HHHHHHHHTCEEEEEESCCSH--------HHHHHHHTTCEEEESCCGG------GGTTCSEEEECTTSCTT---CHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCCCh--------hhhHHHHCCCeEEECCccc------cCCCCCEEEECCCcCCC---CHHHHH
Confidence 467788999999999987542 1224456799887765432 24688998887665321 123556
Q ss_pred HHHhCCcc
Q 026978 81 IKVAGNIK 88 (230)
Q Consensus 81 a~~ag~Vk 88 (230)
|++.| ++
T Consensus 87 A~~~g-ip 93 (96)
T d1p3da1 87 SKQKR-IP 93 (96)
T ss_dssp HHHTT-CC
T ss_pred HHHcC-CC
Confidence 78888 65
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=92.00 E-value=0.084 Score=37.84 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=42.5
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhh-----cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEF-----QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLE 76 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l-----~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ 76 (230)
+..|.++||+|++++|+.. +.+.+... ...+.+..........++.++++++|+||.++... ....
T Consensus 17 A~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v~~~---~~~~ 87 (184)
T d1bg6a2 17 AAYLALKGQSVLAWDIDAQ------RIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVPAI---HHAS 87 (184)
T ss_dssp HHHHHHTTCEEEEECSCHH------HHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSCGG---GHHH
T ss_pred HHHHHHCCCEEEEEECCHH------HHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEEchh---HHHH
Confidence 4567889999999999732 33322221 01122222222212234678999999999998654 3455
Q ss_pred HHHHHHH
Q 026978 77 IVHAIKV 83 (230)
Q Consensus 77 ll~Aa~~ 83 (230)
+++..+.
T Consensus 88 ~~~~i~~ 94 (184)
T d1bg6a2 88 IAANIAS 94 (184)
T ss_dssp HHHHHGG
T ss_pred HHHHhhh
Confidence 5665554
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=91.85 E-value=0.16 Score=38.20 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=39.4
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCC-C-HHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELD-E-HKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~-d-~~~L~~al~g~D~Vi~~~~~~ 69 (230)
|++++..+|++|++++-+.+... ..+++++...-. + .+.+.+.++.+|++|++++..
T Consensus 38 iA~~~~~~Ga~V~li~g~~~~~~------------p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvs 96 (223)
T d1u7za_ 38 IAAAAARRGANVTLVSGPVSLPT------------PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA 96 (223)
T ss_dssp HHHHHHHTTCEEEEEECSCCCCC------------CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHcCCchhhhhcccccCc------------ccccccceehhhHHHHHHHHhhhccceeEeeeechh
Confidence 47889999999999987665321 346666654321 1 234445567999999999876
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.99 E-value=0.21 Score=35.37 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=31.5
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+++.|+++||+|++.+|+.. +.+. +...+.... .++.++++.+|+|+.++..
T Consensus 16 iA~~L~~~g~~v~~~d~~~~------~~~~---~~~~~~~~~-------~~~~e~~~~~diii~~v~~ 67 (162)
T d3cuma2 16 MATNLLKAGYLLNVFDLVQS------AVDG---LVAAGASAA-------RSARDAVQGADVVISMLPA 67 (162)
T ss_dssp HHHHHHHTTCEEEEECSSHH------HHHH---HHHTTCEEC-------SSHHHHHTSCSEEEECCSC
T ss_pred HHHHHHHCCCeEEEEECchh------hhhh---hhhhhcccc-------chhhhhccccCeeeecccc
Confidence 46889999999999998743 3222 222232221 2344566667777766654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=90.47 E-value=0.38 Score=30.53 Aligned_cols=70 Identities=19% Similarity=0.202 Sum_probs=47.6
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHAI 81 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~Aa 81 (230)
++.|.++|++|++.+....... ...+ ..+..+..+... .. .+.++|.||..-|... ...+++.|
T Consensus 21 a~~L~~~g~~v~~~D~~~~~~~-------~~~~-~~~~~~~~~~~~-~~----~~~~~d~vi~SPGi~~---~~~~~~~a 84 (93)
T d2jfga1 21 VDFFLARGVTPRVMDTRMTPPG-------LDKL-PEAVERHTGSLN-DE----WLMAADLIVASPGIAL---AHPSLSAA 84 (93)
T ss_dssp HHHHHHTTCCCEEEESSSSCTT-------GGGS-CTTSCEEESBCC-HH----HHHHCSEEEECTTSCT---TSHHHHHH
T ss_pred HHHHHHCCCEEEEeeCCcCchh-------HHHH-hhccceeecccc-hh----hhccCCEEEECCCCCC---CCHHHHHH
Confidence 6788999999999998654321 1123 356777777653 22 3567899998776532 34678889
Q ss_pred HHhCCcc
Q 026978 82 KVAGNIK 88 (230)
Q Consensus 82 ~~ag~Vk 88 (230)
++.| ++
T Consensus 85 ~~~g-i~ 90 (93)
T d2jfga1 85 ADAG-IE 90 (93)
T ss_dssp HHTT-CE
T ss_pred HHcC-CC
Confidence 9988 65
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=90.08 E-value=0.36 Score=34.55 Aligned_cols=72 Identities=19% Similarity=0.344 Sum_probs=48.0
Q ss_pred HHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----hhhHHHHH
Q 026978 3 KASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ----FLDQLEIV 78 (230)
Q Consensus 3 ~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~----~~~~~~ll 78 (230)
+.+..-|-+|++++++ +++.+.+++.-...++.. +.+.+.+.+.++.+|+||.++-... ..-++..+
T Consensus 49 ~~A~~lGA~V~~~D~~------~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aalipG~~aP~lIt~~mv 119 (168)
T d1pjca1 49 KMAVGLGAQVQIFDIN------VERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLV 119 (168)
T ss_dssp HHHHHTTCEEEEEESC------HHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHH
T ss_pred HHHhhCCCEEEEEeCc------HHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeecCCcccCeeecHHHH
Confidence 4556779999999986 345555554433344443 4678899999999999999986542 23355556
Q ss_pred HHHHH
Q 026978 79 HAIKV 83 (230)
Q Consensus 79 ~Aa~~ 83 (230)
+.+|.
T Consensus 120 ~~Mk~ 124 (168)
T d1pjca1 120 EQMRT 124 (168)
T ss_dssp TTSCT
T ss_pred hhcCC
Confidence 55543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=89.83 E-value=0.49 Score=31.12 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=49.2
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
++.|++.|.+|++++...+. + +.. .+..+++++...+.+. -+.+++.|+.+.+.. .....+.+.
T Consensus 28 a~~ll~~ga~v~v~~~~~~~----~----~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d~--~~n~~i~~~ 92 (113)
T d1pjqa1 28 ARLLLEAGARLTVNALTFIP----Q----FTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDDD--TVNQRVSDA 92 (113)
T ss_dssp HHHHHHTTBEEEEEESSCCH----H----HHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSCH--HHHHHHHHH
T ss_pred HHHHHHCCCeEEEEeccCCh----H----HHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCCH--HHHHHHHHH
Confidence 57789999999999876542 1 112 2345789999888653 367899999876543 345678888
Q ss_pred HHHhC
Q 026978 81 IKVAG 85 (230)
Q Consensus 81 a~~ag 85 (230)
|++.|
T Consensus 93 a~~~~ 97 (113)
T d1pjqa1 93 AESRR 97 (113)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99888
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=89.22 E-value=0.36 Score=32.02 Aligned_cols=75 Identities=7% Similarity=0.127 Sum_probs=49.1
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCChhhHHHHHH
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILK--EVDVVISTVAYPQFLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~--g~D~Vi~~~~~~~~~~~~~ll~ 79 (230)
+.+..+-|++|++++.+... |.. .-.-+.+.+|++|.+.+.+..+ ++|+|-.-.=..+. ..++
T Consensus 27 a~aA~~lG~~v~v~d~~~~~---PA~--------~va~~~i~~~~~d~~~l~~~~~~~~~DviT~E~EnI~~----~~L~ 91 (111)
T d1kjqa2 27 AIECQRLGVEVIAVDRYADA---PAM--------HVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIAT----DMLI 91 (111)
T ss_dssp HHHHHTTTCEEEEEESSTTC---GGG--------GGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSCH----HHHH
T ss_pred HHHHHHCCCEEEEEcCCCCC---chh--------hcCCeEEECCCCCHHHHHHHHHhhCCceEEEEecCcCH----HHHH
Confidence 44566779999999987654 310 1234688999999999988764 67998543322222 3455
Q ss_pred HHHHhCCcceEecc
Q 026978 80 AIKVAGNIKRFLPS 93 (230)
Q Consensus 80 Aa~~ag~Vkr~v~S 93 (230)
.+.+.| .+++||
T Consensus 92 ~le~~g--~~v~Ps 103 (111)
T d1kjqa2 92 QLEEEG--LNVVPC 103 (111)
T ss_dssp HHHHTT--CEESSC
T ss_pred HHHHCC--CeECCC
Confidence 666666 346664
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=87.72 E-value=0.042 Score=38.90 Aligned_cols=60 Identities=15% Similarity=0.088 Sum_probs=33.8
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeE-EEEecCCCHHHHHHHhcCCCEEEEcCCCCCh
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVT-IIEGELDEHKKIVSILKEVDVVISTVAYPQF 71 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~-vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~ 71 (230)
+..|.+.||+|++++|+..... .+......+.. .......+. +.+.++|+||.++...++
T Consensus 16 a~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vka~~~ 76 (167)
T d1ks9a2 16 LTALCKQGHEVQGWLRVPQPYC------SVNLVETDGSIFNESLTANDP----DFLATSDLLLVTLKAWQV 76 (167)
T ss_dssp HHHHHHTTCEEEEECSSCCSEE------EEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECSCGGGH
T ss_pred HHHHHHCCCceEEEEcCHHHhh------hhccccCCccccccccccchh----hhhcccceEEEeecccch
Confidence 4678899999999999865321 11111111111 111111233 445689999999877554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=87.43 E-value=1.8 Score=32.95 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=15.5
Q ss_pred CHHHHhhCCCeEEEEEcC
Q 026978 1 MVKASVSSGHKTFVYARP 18 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~ 18 (230)
++++|+++|.+|.+..|+
T Consensus 26 iA~~la~~Ga~Vvi~~~~ 43 (297)
T d1d7oa_ 26 VAKSLAAAGAEILVGTWV 43 (297)
T ss_dssp HHHHHHHTTCEEEEEEEH
T ss_pred HHHHHHHCCCEEEEEeCc
Confidence 478999999999988875
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=86.46 E-value=0.26 Score=34.93 Aligned_cols=70 Identities=21% Similarity=0.277 Sum_probs=44.0
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC-hhhHHHHHH
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ-FLDQLEIVH 79 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~-~~~~~~ll~ 79 (230)
++.|.+.|. ++++..|+. +|++.+.. .-|.++ .+.+++.+++..+|+||++++... +-....+-.
T Consensus 40 ~~~L~~~g~~~i~v~nRt~------~ka~~l~~--~~~~~~-----~~~~~~~~~l~~~Divi~atss~~~ii~~~~i~~ 106 (159)
T d1gpja2 40 AKSLVDRGVRAVLVANRTY------ERAVELAR--DLGGEA-----VRFDELVDHLARSDVVVSATAAPHPVIHVDDVRE 106 (159)
T ss_dssp HHHHHHHCCSEEEEECSSH------HHHHHHHH--HHTCEE-----CCGGGHHHHHHTCSEEEECCSSSSCCBCHHHHHH
T ss_pred HHHHHhcCCcEEEEEcCcH------HHHHHHHH--hhhccc-----ccchhHHHHhccCCEEEEecCCCCccccHhhhHH
Confidence 577888897 688898873 35443322 224443 244578889999999999998764 323333334
Q ss_pred HHHHh
Q 026978 80 AIKVA 84 (230)
Q Consensus 80 Aa~~a 84 (230)
+++..
T Consensus 107 ~~~~r 111 (159)
T d1gpja2 107 ALRKR 111 (159)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 44443
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=84.48 E-value=0.54 Score=33.32 Aligned_cols=77 Identities=21% Similarity=0.178 Sum_probs=46.3
Q ss_pred HHHHhhCCCeEEEEEcCCCCCCCcchHhhhhh-hcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCC----------
Q 026978 2 VKASVSSGHKTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQ---------- 70 (230)
Q Consensus 2 v~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~-l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~---------- 70 (230)
+-+|.+.|.+|+++.|+. +|++.+.. +...+ .+...++.+. ....+|+||++.+...
T Consensus 34 ~~al~~~g~~i~I~nRt~------~ka~~l~~~~~~~~-~~~~~~~~~~-----~~~~~dliIN~Tp~G~~~~~~~~~~~ 101 (170)
T d1nyta1 34 LLPLLSLDCAVTITNRTV------SRAEELAKLFAHTG-SIQALSMDEL-----EGHEFDLIINATSSGISGDIPAIPSS 101 (170)
T ss_dssp HHHHHHTTCEEEEECSSH------HHHHHHHHHTGGGS-SEEECCSGGG-----TTCCCSEEEECCSCGGGTCCCCCCGG
T ss_pred HHHhcccceEEEeccchH------HHHHHHHHHHhhcc-cccccccccc-----cccccceeecccccCcccCCCCCcHH
Confidence 457888898999999974 35444433 22111 2223333322 2357899999986430
Q ss_pred ----------h---hhHHHHHHHHHHhCCcceEe
Q 026978 71 ----------F---LDQLEIVHAIKVAGNIKRFL 91 (230)
Q Consensus 71 ----------~---~~~~~ll~Aa~~ag~Vkr~v 91 (230)
+ ...-.++..|++.| .++.+
T Consensus 102 ~~~~~~~v~D~vY~P~~T~ll~~A~~~G-~~~~i 134 (170)
T d1nyta1 102 LIHPGIYCYDMFYQKGKTPFLAWCEQRG-SKRNA 134 (170)
T ss_dssp GCCTTCEEEESCCCSSCCHHHHHHHHTT-CCEEE
T ss_pred HhccCcEEEEeecCCCCCHHHHHHHHcC-CCccc
Confidence 0 12347888999998 77665
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=84.13 E-value=0.78 Score=32.42 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=34.7
Q ss_pred HHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCC
Q 026978 4 ASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVA 67 (230)
Q Consensus 4 ~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~ 67 (230)
.+...|.+|++.+++.+ |.+.++ ..|++.+. |+.+...-....+|+|+||.+.|
T Consensus 47 lak~~G~~vi~~~~~~~------~~~~~~---~lGa~~~i-~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 47 VARAMGLRVLAAASRPE------KLALPL---ALGAEEAA-TYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp HHHHTTCEEEEEESSGG------GSHHHH---HTTCSEEE-EGGGHHHHHHHTTSEEEEEECSC
T ss_pred hhccccccccccccccc------cccccc---ccccceee-ehhhhhhhhhccccccccccccc
Confidence 34457999999998643 333333 35665443 56554444455679999999876
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=83.60 E-value=6.5 Score=28.76 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHH-------cCCCEEEEeccccch
Q 026978 110 AYLEKKRIVRRAIEA-------AQIPYTFVSANLCGA 139 (230)
Q Consensus 110 ~~~~~K~~~e~~l~~-------~gl~~tilr~g~~~~ 139 (230)
.|..+|..++.+.+. .|+....|.||++.-
T Consensus 154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T 190 (257)
T d1fjha_ 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATET 190 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---
T ss_pred HHHHHhhhhhccccccccccccccccccccccCCcCC
Confidence 466899988876653 689999999998753
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=83.07 E-value=1.6 Score=31.07 Aligned_cols=64 Identities=9% Similarity=0.116 Sum_probs=43.7
Q ss_pred HHHHhhCCC-eEEEEEcCCCCCCCcchHhhhh-hh-cCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Q 026978 2 VKASVSSGH-KTFVYARPVTQNSRPSKLEIHK-EF-QGIGVTIIEGELDEHKKIVSILKEVDVVISTVAY 68 (230)
Q Consensus 2 v~~Ll~~g~-~V~~l~R~~~~~~~p~k~~~l~-~l-~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~ 68 (230)
+.+|++.|. +++++.|+.... +|.+.+. .+ ...+..+...++.+.+.+...+..+|.||++.+.
T Consensus 34 ~~al~~~g~~~i~i~nR~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 34 GAQGAIEGLKEIKLFNRRDEFF---DKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKV 100 (182)
T ss_dssp HHHHHHTTCSEEEEEECSSTTH---HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSST
T ss_pred HHHHhhcCCceEeeeccchHHH---HHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceeccccCC
Confidence 456777775 788888875432 2322211 12 1224556678999999999999999999999864
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=82.10 E-value=0.33 Score=34.11 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=38.1
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCCChhhHHHHHHH
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYPQFLDQLEIVHA 80 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~~~~~~~~ll~A 80 (230)
+++.|.++||+|++++|+.. +.+.. ...|+.-...| + .++++.+|+||.++.. .....+++.
T Consensus 15 lA~~l~~~g~~V~~~d~~~~------~~~~a---~~~~~~~~~~~--~----~~~~~~~DiIilavp~---~~~~~vl~~ 76 (165)
T d2f1ka2 15 LAGDLRRRGHYLIGVSRQQS------TCEKA---VERQLVDEAGQ--D----LSLLQTAKIIFLCTPI---QLILPTLEK 76 (165)
T ss_dssp HHHHHHHTTCEEEEECSCHH------HHHHH---HHTTSCSEEES--C----GGGGTTCSEEEECSCH---HHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECCch------HHHHH---HHhhccceeee--e----cccccccccccccCcH---hhhhhhhhh
Confidence 36789999999999998742 22221 12332111111 1 2467899999988753 344455555
Q ss_pred HHH
Q 026978 81 IKV 83 (230)
Q Consensus 81 a~~ 83 (230)
...
T Consensus 77 l~~ 79 (165)
T d2f1ka2 77 LIP 79 (165)
T ss_dssp HGG
T ss_pred hhh
Confidence 444
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=81.64 E-value=1.8 Score=33.89 Aligned_cols=29 Identities=14% Similarity=0.046 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHH--------cCCCEEEEeccccc
Q 026978 110 AYLEKKRIVRRAIEA--------AQIPYTFVSANLCG 138 (230)
Q Consensus 110 ~~~~~K~~~e~~l~~--------~gl~~tilr~g~~~ 138 (230)
.|..+|..++.+.+. +|+....|.||+..
T Consensus 185 ~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 185 GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 355788888765542 58999999999763
|
| >d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Escherichia coli [TaxId: 562]
Probab=80.07 E-value=6.3 Score=28.83 Aligned_cols=43 Identities=9% Similarity=0.089 Sum_probs=24.5
Q ss_pred CCeEEEEecCCCHHHHHHHhc-CCCEEEEcCCCCChhhHHHHHHHHHHhC
Q 026978 37 IGVTIIEGELDEHKKIVSILK-EVDVVISTVAYPQFLDQLEIVHAIKVAG 85 (230)
Q Consensus 37 ~gv~vv~gD~~d~~~L~~al~-g~D~Vi~~~~~~~~~~~~~ll~Aa~~ag 85 (230)
..+.+=.|.+.|.+++.++.+ |++.+++-.- ...++++|++.+
T Consensus 65 p~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~------~~~v~~~a~~~~ 108 (213)
T d1wbha1 65 PEAIVGAGTVLNPQQLAEVTEAGAQFAISPGL------TEPLLKAATEGT 108 (213)
T ss_dssp TTSEEEEESCCSHHHHHHHHHHTCSCEEESSC------CHHHHHHHHHSS
T ss_pred CCCeeeccccccHHHHHHHHHCCCcEEECCCC------CHHHHHHHHhcC
Confidence 345555566666666666655 6666665332 245666666666
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=80.01 E-value=0.097 Score=36.71 Aligned_cols=53 Identities=19% Similarity=0.090 Sum_probs=33.9
Q ss_pred CHHHHhhCCCeEEEEEcCCCCCCCcchHhhhhhhcCCCeEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Q 026978 1 MVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIEGELDEHKKIVSILKEVDVVISTVAYP 69 (230)
Q Consensus 1 lv~~Ll~~g~~V~~l~R~~~~~~~p~k~~~l~~l~~~gv~vv~gD~~d~~~L~~al~g~D~Vi~~~~~~ 69 (230)
|++.|+++||+|++..|..+.. .. +...++.+.. +..++++.+|+||.++...
T Consensus 15 ia~~l~~~g~~v~~~~~~~~~~------~~---~~~~~~~~~~-------~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 15 LASRLRSRGVEVVTSLEGRSPS------TI---ERARTVGVTE-------TSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp HHHHHHHTTCEEEECCTTCCHH------HH---HHHHHHTCEE-------CCHHHHHTSSEEEECSCGG
T ss_pred HHHHHHHCCCeEEEEcCchhHH------HH---Hhhhcccccc-------cHHHHHhhcCeEEEEecCc
Confidence 4678999999999887764321 11 1112333321 2356788999999998764
|